+D GENES KO
#
KEGG Orthology (KO) - Lactococcus taiwanensis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lti00010]
D JW886_09480 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JW886_00525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JW886_06305 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JW886_02180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JW886_08990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JW886_05560 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JW886_00885 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW886_03350 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW886_02145 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JW886_02625 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_08080 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_03735 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JW886_06300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JW886_01250 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JW886_01245 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JW886_01240 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_03020 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JW886_05550 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_06295 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_00490 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JW886_08490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JW886_06835 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JW886_09300 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JW886_01450 HAD-IA family hydrolase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D JW886_01865 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_02985 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_06710 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_07945 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_08500 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_06580 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_02385 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
C 00020 Citrate cycle (TCA cycle) [PATH:lti00020]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_03790 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JW886_01250 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JW886_01245 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JW886_01240 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JW886_03020 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:lti00030]
D JW886_00525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JW886_00775 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JW886_00485 lactonase family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D JW886_00615 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JW886_03600 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JW886_09130 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JW886_07420 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JW886_00830 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JW886_06755 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D JW886_06530 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JW886_04885 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D JW886_08740 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JW886_04440 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JW886_00610 gntK; gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D JW886_08990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JW886_02180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JW886_06305 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:lti00040]
D JW886_02015 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JW886_06330 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JW886_06765 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D JW886_09130 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JW886_06760 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D JW886_06840 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D JW886_06845 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:lti00051]
D JW886_06700 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JW886_04280 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JW886_06305 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JW886_02180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JW886_01205 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D JW886_05055 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D JW886_06845 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D JW886_08990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JW886_05560 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JW886_05060 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JW886_08040 PTS sugar transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D JW886_08045 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D JW886_08050 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D JW886_01200 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JW886_01190 PTS transporter subunit EIIC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:lti00052]
D JW886_06835 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JW886_09300 galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JW886_09295 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JW886_09290 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JW886_01955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JW886_09280 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JW886_06330 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JW886_09480 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JW886_09285 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JW886_06305 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JW886_03980 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JW886_07985 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:lti00053]
D JW886_02015 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JW886_06765 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:lti00500]
D JW886_03980 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JW886_07985 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JW886_06330 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JW886_02970 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JW886_02965 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JW886_01850 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_02980 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_08505 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_01865 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_02985 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_06710 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_07945 ascB; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_08500 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_06580 glycoside hydrolase family 1 protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D JW886_03960 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JW886_03965 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JW886_03970 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D JW886_01680 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JW886_03975 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JW886_05720 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D JW886_08000 alpha-glycosidase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D JW886_03955 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D JW886_07980 glycoside hydrolase family 65 protein K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D JW886_03045 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D JW886_02385 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JW886_02395 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D JW886_09480 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JW886_00525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JW886_06700 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lti00520]
D JW886_09790 fibronectin type III domain-containing protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D JW886_03155 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JW886_02385 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JW886_06310 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JW886_07130 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D JW886_06700 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JW886_05240 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JW886_03035 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JW886_08860 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JW886_02505 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JW886_03225 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JW886_05690 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JW886_06030 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D JW886_01505 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JW886_02315 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JW886_06825 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D JW886_09480 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JW886_06330 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JW886_02015 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JW886_09295 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JW886_09290 galT; UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JW886_01955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JW886_09280 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JW886_08040 PTS sugar transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D JW886_08045 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D JW886_08050 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D JW886_00525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JW886_04280 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JW886_03960 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JW886_03965 glgD; glucose-1-phosphate adenylyltransferase subunit GlgD K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:lti00620]
D JW886_03020 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JW886_01250 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JW886_01245 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JW886_01240 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_03765 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JW886_00490 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JW886_08490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JW886_09440 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JW886_09445 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JW886_07840 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JW886_06300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JW886_04335 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JW886_04315 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JW886_04325 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JW886_04330 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JW886_03540 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JW886_07865 spxB; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D JW886_05550 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_06295 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_06220 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D JW886_01835 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JW886_03190 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JW886_03790 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JW886_07140 NAD-dependent malic enzyme K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lti00630]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_00695 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JW886_03515 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_04615 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:lti00640]
D JW886_09440 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JW886_09445 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JW886_07840 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_03765 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JW886_04335 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JW886_04315 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JW886_04325 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JW886_04330 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JW886_05550 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_06295 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_06220 aldo/keto reductase K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:lti00650]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_00490 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JW886_03765 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D JW886_03020 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JW886_07125 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D JW886_05760 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JW886_05475 acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D JW886_05870 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D JW886_04815 (S)-acetoin forming diacetyl reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:lti00660]
D JW886_05760 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JW886_05475 acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D JW886_05870 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00562 Inositol phosphate metabolism [PATH:lti00562]
D JW886_03220 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JW886_05560 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lti00190]
D JW886_04470 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JW886_03990 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JW886_03995 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JW886_08325 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JW886_08315 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JW886_08320 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JW886_08330 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JW886_08310 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JW886_08340 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JW886_08335 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JW886_08345 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JW886_03550 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D JW886_08530 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lti00710]
D JW886_02145 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JW886_00885 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW886_03350 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW886_08990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JW886_02180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JW886_07420 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JW886_00830 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D JW886_05560 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JW886_09130 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:lti00720]
D JW886_03020 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D JW886_03790 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_04335 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JW886_04315 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JW886_04325 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JW886_04330 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JW886_04915 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JW886_04600 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JW886_07840 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JW886_09440 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JW886_09445 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:lti00680]
D JW886_03515 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JW886_03735 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JW886_08990 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JW886_02180 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D JW886_06305 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JW886_09440 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JW886_09445 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JW886_07840 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JW886_02625 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_08080 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_03530 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JW886_03525 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JW886_03535 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:lti00910]
D JW886_05260 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JW886_00695 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JW886_09520 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JW886_09525 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism [PATH:lti00920]
D JW886_04120 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D JW886_08720 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JW886_03180 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JW886_04345 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JW886_09095 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D JW886_09090 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lti00061]
D JW886_04335 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D JW886_04315 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JW886_04325 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D JW886_04330 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D JW886_04295 acyl carrier protein K02078 acpP; acyl carrier protein
D JW886_04300 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JW886_04290 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JW886_04310 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JW886_04305 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JW886_04380 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JW886_03380 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JW886_04320 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JW886_03385 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lti00071]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_00490 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JW886_08490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lti00561]
D JW886_04615 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JW886_02195 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JW886_01300 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JW886_05160 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JW886_01460 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JW886_03005 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JW886_00420 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D JW886_00415 glycosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D JW886_02055 sulfatase-like hydrolase/transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D JW886_04405 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:lti00564]
D JW886_06325 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JW886_02190 glpO; type 1 glycerol-3-phosphate oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D JW886_05160 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JW886_01460 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JW886_03005 diacylglycerol kinase family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JW886_07095 alpha/beta hydrolase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D JW886_01260 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JW886_04765 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JW886_00385 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JW886_09240 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JW886_04720 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D JW886_05065 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D JW886_06245 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D JW886_09285 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lti00230]
D JW886_08855 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JW886_04885 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D JW886_08740 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JW886_04440 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JW886_06940 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JW886_06865 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JW886_06895 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JW886_06945 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JW886_06955 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JW886_06950 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JW886_06900 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JW886_06855 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JW886_06860 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JW886_06960 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JW886_07745 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JW886_06880 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JW886_03700 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JW886_04895 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JW886_01140 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D JW886_06885 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D JW886_02065 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JW886_06150 nucleoside-triphosphate diphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JW886_05615 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D JW886_06695 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JW886_05610 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D JW886_08935 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JW886_05145 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JW886_05140 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JW886_02270 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JW886_01435 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JW886_02740 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JW886_04685 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JW886_09180 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JW886_02410 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D JW886_00155 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JW886_09520 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JW886_09525 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:lti00240]
D JW886_06420 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JW886_07250 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JW886_07255 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JW886_05300 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JW886_06360 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D JW886_06365 dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D JW886_07030 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D JW886_05295 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JW886_06355 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JW886_09430 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JW886_03105 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JW886_08025 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JW886_07845 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D JW886_09075 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JW886_07265 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JW886_06540 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D JW886_06525 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D JW886_02270 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D JW886_05145 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JW886_05140 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JW886_05590 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JW886_02895 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JW886_01870 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JW886_03475 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JW886_07010 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lti00250]
D JW886_00795 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D JW886_04125 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JW886_00805 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JW886_02695 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JW886_08610 pyridoxal phosphate-dependent aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D JW886_01775 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JW886_01600 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JW886_01605 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JW886_09180 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JW886_07745 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JW886_07255 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JW886_05260 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JW886_00695 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JW886_06420 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JW886_07250 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JW886_06950 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JW886_05240 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JW886_06940 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lti00260]
D JW886_04145 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JW886_07400 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JW886_05675 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JW886_05680 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JW886_00280 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JW886_03515 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JW886_04615 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JW886_02625 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_08080 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_03530 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JW886_03525 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JW886_03535 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_04480 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JW886_04485 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JW886_06595 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JW886_06600 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:lti00270]
D JW886_08720 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JW886_03180 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JW886_04345 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JW886_04340 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JW886_09085 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JW886_08950 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JW886_08845 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JW886_00675 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D JW886_03605 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JW886_02250 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D JW886_04145 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JW886_07400 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JW886_05675 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JW886_09095 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D JW886_09090 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JW886_06170 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JW886_05550 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_06295 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_04480 sdaAB; L-serine ammonia-lyase, iron-sulfur-dependent subunit beta K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JW886_04485 sdaAA; L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JW886_03530 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JW886_03525 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:lti00280]
D JW886_06170 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_00745 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_07125 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lti00290]
D JW886_05760 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JW886_06170 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JW886_01775 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00300 Lysine biosynthesis [PATH:lti00300]
D JW886_05675 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JW886_04145 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JW886_07400 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JW886_07385 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JW886_07070 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JW886_02350 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D JW886_06165 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JW886_01225 pyridoxal phosphate-dependent aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D JW886_02355 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D JW886_02645 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lti00310]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:lti00220]
D JW886_09535 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JW886_01600 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JW886_01605 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JW886_09540 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D JW886_06950 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JW886_00695 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JW886_06420 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JW886_07250 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JW886_09520 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JW886_09525 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JW886_05260 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JW886_01775 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JW886_03375 M20 family metallopeptidase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:lti00330]
D JW886_07360 GNAT family N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D JW886_01805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JW886_08865 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JW886_07310 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JW886_07305 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:lti00340]
D JW886_05825 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JW886_05820 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D JW886_05855 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D JW886_05845 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D JW886_05840 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JW886_05850 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JW886_05835 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D JW886_05815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JW886_05860 histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D JW886_05830 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:lti00350]
D JW886_05815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JW886_00490 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D JW886_08490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:lti00360]
D JW886_05815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JW886_01805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:lti00380]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_01805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lti00400]
D JW886_01480 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JW886_08280 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JW886_07750 aroD; type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D JW886_08205 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JW886_08210 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JW886_08255 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JW886_06630 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JW886_06625 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JW886_06620 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D JW886_06610 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D JW886_06615 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D JW886_06595 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JW886_06600 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JW886_00680 chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D JW886_08215 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JW886_08200 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D JW886_05815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:lti00430]
D JW886_07840 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JW886_09440 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JW886_09445 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lti00450]
D JW886_09090 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JW886_04340 cystathionine gamma-synthase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JW886_09085 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JW886_08410 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JW886_04945 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JW886_04370 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lti00460]
D JW886_04125 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JW886_03515 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lti00470]
D JW886_04570 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JW886_02640 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JW886_06075 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JW886_06065 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JW886_06950 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JW886_06155 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JW886_07185 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JW886_00795 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D JW886_06165 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JW886_02775 hypothetical protein K01780 cntK; histidine racemase [EC:5.1.1.24]
C 00480 Glutathione metabolism [PATH:lti00480]
D JW886_02470 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JW886_04580 NAD(P)/FAD-dependent oxidoreductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D JW886_00615 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JW886_03600 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JW886_00775 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JW886_06430 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:lti00511]
D JW886_09285 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D JW886_06735 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:lti00542]
D JW886_08425 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lti00541]
D JW886_06330 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JW886_01955 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JW886_09280 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JW886_02015 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JW886_01940 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JW886_01960 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JW886_01945 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JW886_01965 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D JW886_04280 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JW886_08860 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JW886_01505 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JW886_02315 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lti00550]
D JW886_02505 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JW886_03225 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JW886_05690 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JW886_09555 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JW886_07185 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JW886_02640 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JW886_02645 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JW886_05375 diacylglycerol kinase family protein K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D JW886_00390 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JW886_00650 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JW886_04665 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JW886_07180 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JW886_03195 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JW886_00305 penicillin-binding protein 1A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JW886_01015 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JW886_05020 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JW886_08480 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D JW886_05470 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D JW886_05460 type 1 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D JW886_02835 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D JW886_02630 penicillin-binding protein 2 K00687 pbp2B; penicillin-binding protein 2B
D JW886_04660 penicillin-binding protein K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:lti00552]
D JW886_00650 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JW886_08425 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JW886_06075 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JW886_06065 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JW886_06070 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D JW886_06060 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D JW886_03070 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JW886_08020 LCP family protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D JW886_02055 sulfatase-like hydrolase/transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D JW886_04405 LTA synthase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D JW886_00420 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lti00543]
D JW886_08425 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JW886_06785 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D JW886_04985 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D JW886_08720 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lti00730]
D JW886_03170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_08745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_02805 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JW886_07960 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JW886_09150 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JW886_08590 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D JW886_00155 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:lti00740]
D JW886_08165 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D JW886_05545 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JW886_03495 nfsA; oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D JW886_08855 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:lti00750]
D JW886_03085 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D JW886_03525 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JW886_00280 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lti00760]
D JW886_05435 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JW886_04895 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JW886_09320 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D JW886_02090 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JW886_05430 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JW886_05445 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D JW886_02745 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:lti00770]
D JW886_05760 alsS; acetolactate synthase AlsS K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JW886_06230 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JW886_06550 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D JW886_03410 phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D JW886_03405 coaC; phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D JW886_00500 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JW886_03770 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JW886_04565 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JW886_06170 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:lti00780]
D JW886_04310 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JW886_04305 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JW886_04380 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JW886_03380 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JW886_04320 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JW886_03385 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JW886_08960 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lti00785]
D JW886_01255 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_01250 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D JW886_01245 alpha-ketoacid dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D JW886_01240 2-oxo acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:lti00790]
D JW886_05650 folE; GTP cyclohydrolase I FolE K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JW886_05660 NUDIX domain-containing protein K19965 folQ; dihydroneopterin triphosphate pyrophosphohydrolase [EC:3.6.1.67]
D JW886_05645 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D JW886_05655 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JW886_05630 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JW886_05665 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:lti00670]
D JW886_05630 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JW886_04915 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D JW886_04600 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JW886_03515 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JW886_06895 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JW886_06880 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JW886_08905 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JW886_07010 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JW886_01820 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lti00860]
D JW886_07100 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lti00130]
D JW886_07920 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JW886_04105 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D JW886_04100 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D JW886_04095 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D JW886_04080 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D JW886_04085 menE; o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D JW886_04090 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D JW886_04075 PaaI family thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D JW886_01900 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JW886_00535 NAD(P)H-binding protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lti00900]
D JW886_07960 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_07125 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D JW886_07115 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D JW886_02925 mvk; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D JW886_02935 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D JW886_02930 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D JW886_02940 type 2 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D JW886_04620 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JW886_00390 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JW886_07420 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:lti00523]
D JW886_01940 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JW886_01960 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JW886_01945 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JW886_01965 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:lti01054]
D JW886_00795 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D JW886_04105 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D JW886_01960 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D JW886_03435 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JW886_05565 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:lti00332]
D JW886_07310 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JW886_07305 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:lti00261]
D JW886_04145 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JW886_07400 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JW886_07385 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JW886_07070 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lti00521]
D JW886_09480 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D JW886_03220 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JW886_01940 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JW886_01960 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JW886_01945 dTDP-4-dehydrorhamnose 3,5-epimerase family protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JW886_01965 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JW886_09480 ROK family glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:lti00525]
D JW886_01940 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JW886_01960 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:lti00401]
D JW886_08215 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JW886_05815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D JW886_06630 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JW886_06625 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D JW886_04300 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JW886_04305 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JW886_04380 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JW886_03385 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JW886_04295 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D JW886_08950 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lti00362]
D JW886_03415 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D JW886_06980 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:lti00627]
D JW886_01805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JW886_03540 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JW886_07280 UbiD family decarboxylase K22958 lpdC; gallate decarboxylase subunit C [EC:4.1.1.59]
D JW886_07275 UbiX family flavin prenyltransferase K22959 lpdB; gallate decarboxylase subunit B
D JW886_07270 amino acid decarboxylase K22960 lpdD; gallate decarboxylase subunit D
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:lti00625]
D JW886_08490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JW886_00490 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D JW886_03415 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:lti00643]
D JW886_01805 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D JW886_03415 tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:lti00626]
D JW886_08490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JW886_00490 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lti03020]
D JW886_08455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JW886_08450 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JW886_00130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JW886_08930 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JW886_03705 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lti03010]
D JW886_04525 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JW886_00480 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JW886_00230 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JW886_02375 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JW886_00175 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JW886_00645 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JW886_01005 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JW886_00190 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JW886_00950 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JW886_00265 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JW886_00135 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JW886_01010 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JW886_00140 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JW886_00195 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JW886_08870 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JW886_07110 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JW886_00215 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JW886_00635 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JW886_00240 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JW886_08185 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JW886_02135 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JW886_09395 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JW886_00245 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JW886_00260 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JW886_00255 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JW886_00200 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JW886_00185 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JW886_06085 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JW886_04160 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JW886_06090 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JW886_09400 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JW886_00955 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JW886_00210 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JW886_00165 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JW886_00225 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JW886_00125 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JW886_00180 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JW886_04690 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JW886_08660 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JW886_05350 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JW886_00235 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JW886_00250 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JW886_00205 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JW886_05360 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JW886_01930 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JW886_00220 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JW886_00170 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JW886_07215 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JW886_01375 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JW886_01370 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JW886_00295 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JW886_03780 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JW886_01635 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JW886_08665 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JW886_00145 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JW886_00460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_00600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_00945 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_01060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_09045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_03240 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_01050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_03250 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_09035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00450 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00590 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_01180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00445 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00585 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00930 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_01045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_03255 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_09030 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lti00970]
D JW886_00455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_00595 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_00940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_01055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_03245 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_09040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_03075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_07855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_02365 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_03290 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_03675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_01185 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JW886_01035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JW886_03265 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JW886_09020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JW886_02995 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JW886_00905 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JW886_07755 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JW886_01040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JW886_01150 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JW886_03285 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JW886_09000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JW886_01170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JW886_03315 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JW886_00910 tRNA-His K14226 tRNA-His; tRNA His
D JW886_03320 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JW886_01175 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JW886_03275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_09010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_01530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_02205 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_00755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_00900 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_08995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_01215 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JW886_03270 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JW886_03680 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JW886_09015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JW886_03895 tRNA-Met K14230 tRNA-Met; tRNA Met
D JW886_01160 tRNA-Met K14230 tRNA-Met; tRNA Met
D JW886_03300 tRNA-Met K14230 tRNA-Met; tRNA Met
D JW886_03305 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JW886_07430 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JW886_07445 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JW886_01165 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JW886_03310 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JW886_02370 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JW886_03295 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JW886_03325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JW886_02325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JW886_01155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JW886_01595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JW886_00115 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JW886_03280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JW886_09005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JW886_01730 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JW886_00915 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JW886_00920 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JW886_00925 tRNA-Val K14237 tRNA-Val; tRNA Val
D JW886_03260 tRNA-Val K14237 tRNA-Val; tRNA Val
D JW886_09025 tRNA-Val K14237 tRNA-Val; tRNA Val
D JW886_00060 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JW886_01790 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JW886_01800 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JW886_01785 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JW886_08130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JW886_09230 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JW886_08600 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JW886_05410 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JW886_05415 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JW886_09055 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JW886_08070 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JW886_08715 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JW886_04370 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JW886_08905 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JW886_00550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JW886_04450 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JW886_08770 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JW886_02795 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JW886_09545 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JW886_00375 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JW886_09235 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JW886_09165 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JW886_09160 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JW886_02830 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JW886_01275 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lti03060]
D JW886_00160 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JW886_00290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JW886_04950 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JW886_00395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JW886_01625 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JW886_03390 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JW886_01475 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JW886_07365 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JW886_04060 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D JW886_04435 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JW886_00990 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JW886_05195 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lti04122]
D JW886_03170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_08745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_04515 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JW886_02805 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lti03018]
D JW886_03360 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D JW886_03735 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JW886_08730 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JW886_04955 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JW886_05810 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JW886_02685 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JW886_08495 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JW886_08940 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JW886_02425 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JW886_07375 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JW886_06305 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JW886_05035 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JW886_02875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lti03030]
D JW886_05175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JW886_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JW886_00370 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JW886_00665 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JW886_02900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JW886_07815 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JW886_01070 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JW886_04165 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JW886_03330 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JW886_00640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_02865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_06180 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JW886_00985 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D JW886_00440 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JW886_03000 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lti03410]
D JW886_05310 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JW886_02130 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JW886_04555 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JW886_02700 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JW886_05530 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JW886_04365 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JW886_00440 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JW886_03695 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JW886_03000 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lti03420]
D JW886_01110 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JW886_08565 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JW886_03365 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JW886_04550 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JW886_05520 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JW886_00440 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JW886_03000 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lti03430]
D JW886_00730 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JW886_07770 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D JW886_00720 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D JW886_05520 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JW886_04605 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JW886_04610 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JW886_03695 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JW886_00640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_02865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JW886_00370 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JW886_01070 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JW886_00665 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JW886_07815 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JW886_02900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JW886_05175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JW886_03000 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lti03440]
D JW886_03695 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JW886_00640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_02865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_09265 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JW886_01230 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JW886_02635 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JW886_02705 recA; recombinase RecA K03553 recA; recombination protein RecA
D JW886_00440 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JW886_00715 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JW886_00710 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JW886_00880 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JW886_08190 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JW886_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JW886_00370 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JW886_01070 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JW886_00665 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JW886_07815 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JW886_02900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JW886_05175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JW886_08925 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:lti03250]
D JW886_02755 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lti02010]
D JW886_05710 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JW886_05705 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D JW886_05700 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JW886_05695 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JW886_06565 ABC transporter permease/substrate binding protein K02001 proW; glycine betaine/proline transport system permease protein
D JW886_06570 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D JW886_04590 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JW886_04585 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JW886_03015 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JW886_08005 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D JW886_08010 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JW886_08015 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JW886_06720 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D JW886_06730 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D JW886_06725 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D JW886_06520 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D JW886_06285 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JW886_06290 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JW886_06280 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JW886_08110 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JW886_08115 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JW886_08105 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JW886_08100 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JW886_08090 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JW886_08095 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JW886_08295 amino acid ABC transporter substrate-binding protein/permease K10036 glnH; glutamine transport system substrate-binding protein
D JW886_08300 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JW886_04925 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JW886_04930 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D JW886_04935 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JW886_03370 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D JW886_08440 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D JW886_08435 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D JW886_02565 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JW886_02555 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JW886_02560 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JW886_02575 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JW886_02570 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JW886_02650 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JW886_02655 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JW886_02660 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JW886_02665 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JW886_02670 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JW886_02675 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JW886_00325 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JW886_00315 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JW886_00320 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JW886_06680 metal ABC transporter substrate-binding protein K19971 psaA; manganese/zinc transport system substrate-binding protein
D JW886_06685 metal ABC transporter permease K19972 psaC; manganese/zinc transport system permease protein
D JW886_06690 metal ABC transporter ATP-binding protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D JW886_02540 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JW886_04475 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JW886_02340 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JW886_02590 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JW886_02330 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JW886_02335 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JW886_08235 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D JW886_08240 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D JW886_05135 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JW886_05130 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JW886_06110 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_06105 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_04015 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JW886_02495 lmrC; multidrug efflux ABC transporter LmrCD subunit C K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_02500 lmrD; multidrug efflux ABC transporter LmrCD subunit D K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_02220 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_02225 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_04005 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D JW886_04000 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D JW886_04820 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:lti02060]
D JW886_01490 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JW886_01485 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JW886_02385 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JW886_02390 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JW886_07950 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JW886_06585 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JW886_01200 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JW886_01190 PTS transporter subunit EIIC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D JW886_02970 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JW886_02965 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JW886_01850 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_02980 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_08505 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_08040 PTS sugar transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D JW886_08045 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D JW886_08050 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D JW886_05060 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JW886_05055 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:lti03070]
D JW886_00290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JW886_04950 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JW886_00160 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JW886_00395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JW886_01625 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JW886_03390 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JW886_01475 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JW886_04435 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JW886_07365 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lti02020]
D JW886_08110 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JW886_08115 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JW886_00410 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JW886_04990 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D JW886_02885 cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JW886_02890 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D JW886_01065 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JW886_08235 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D JW886_08240 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D JW886_08220 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D JW886_08225 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D JW886_06075 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JW886_06070 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D JW886_06065 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JW886_06060 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D JW886_07965 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D JW886_07970 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D JW886_05020 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JW886_07200 HAMP domain-containing protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JW886_07205 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D JW886_07135 2-hydroxycarboxylate transporter family protein K11616 maeN; malate:Na+ symporter
D JW886_00465 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
D JW886_01130 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D JW886_04775 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D JW886_04780 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
D JW886_07190 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D JW886_00695 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_03990 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JW886_03995 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JW886_00705 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D JW886_01505 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D JW886_02315 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lti02024]
D JW886_02250 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D JW886_06630 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JW886_06625 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D JW886_01480 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JW886_06260 LPXTG cell wall anchor domain-containing protein K20276 bapA; large repetitive protein
D JW886_08275 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JW886_07965 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D JW886_07970 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D JW886_02650 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JW886_02655 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JW886_02660 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JW886_02665 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JW886_02670 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JW886_02675 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JW886_00465 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
D JW886_01690 helix-turn-helix domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D JW886_02165 Rgg/GadR/MutR family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D JW886_02515 helix-turn-helix domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D JW886_09455 helix-turn-helix domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D JW886_08635 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JW886_08645 oppB; murein tripeptide/oligopeptide ABC transporter permease OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JW886_08640 oppC; murein tripeptide/oligopeptide ABC transporter permease OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JW886_08655 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JW886_08650 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JW886_01625 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JW886_03390 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JW886_00290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JW886_04950 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JW886_00160 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JW886_00395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JW886_01475 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JW886_04435 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JW886_07365 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lti02040]
D JW886_04925 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JW886_03335 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JW886_03735 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lti01501]
D JW886_03155 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JW886_01130 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D JW886_02650 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JW886_02655 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JW886_02660 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JW886_02665 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JW886_02670 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JW886_02675 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JW886_04015 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JW886_03195 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JW886_02835 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D JW886_00305 penicillin-binding protein 1A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JW886_02630 penicillin-binding protein 2 K00687 pbp2B; penicillin-binding protein 2B
D JW886_04660 penicillin-binding protein K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:lti01502]
D JW886_02640 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JW886_04570 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JW886_02645 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JW886_04665 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JW886_07180 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JW886_05020 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lti01503]
D JW886_00410 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JW886_02755 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JW886_06075 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JW886_06070 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D JW886_06065 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JW886_06060 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lti01000]
C 01001 Protein kinases [BR:lti01001]
D JW886_08875 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JW886_02885 cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JW886_08220 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D JW886_07965 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D JW886_07200 HAMP domain-containing protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JW886_06510 GHKL domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JW886_04775 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lti01009]
D JW886_06305 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JW886_08880 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D JW886_03535 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:lti01002]
D JW886_05195 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JW886_08830 pepC; aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D JW886_06695 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JW886_00040 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D JW886_00810 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JW886_03175 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JW886_09600 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JW886_06940 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JW886_05240 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JW886_00805 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JW886_02695 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JW886_03435 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JW886_05565 choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D JW886_09380 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JW886_04225 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JW886_05515 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JW886_02170 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JW886_07055 C69 family dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D JW886_00025 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JW886_07640 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D JW886_02470 M1 family metallopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JW886_08145 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D JW886_08470 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D JW886_05020 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JW886_04560 pepV; dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D JW886_08520 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D JW886_02355 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D JW886_03560 methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JW886_03935 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JW886_01145 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JW886_02840 pepA; glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D JW886_00380 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D JW886_00410 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JW886_01015 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JW886_03795 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JW886_00035 Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D JW886_00495 PDZ domain-containing protein K07177 K07177; Lon-like protease
D JW886_00990 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JW886_05170 Type 1 glutamine amidotransferase-like domain-containing protein K05995 pepE; dipeptidase E [EC:3.4.13.21]
D JW886_08075 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D JW886_09325 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:lti01003]
D JW886_00420 glycosyltransferase family 4 protein K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D JW886_00415 glycosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D JW886_03970 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D JW886_03195 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JW886_02835 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D JW886_00305 penicillin-binding protein 1A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JW886_08425 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JW886_06785 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D JW886_04985 glycosyltransferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lti01005]
D JW886_01970 glycosyltransferase family 1 protein K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D JW886_01975 glycosyltransferase family 2 protein K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D JW886_02000 lipopolysaccharide biosynthesis protein K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D JW886_05215 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D JW886_08425 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JW886_01440 glycosyltransferase family 2 protein K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lti01011]
D JW886_02505 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JW886_03225 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JW886_05690 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JW886_09555 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JW886_07185 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JW886_08480 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D JW886_02640 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JW886_04570 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JW886_06155 racE; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JW886_08075 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D JW886_04665 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JW886_07180 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JW886_00650 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JW886_03195 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D JW886_02835 penicillin-binding protein K03693 pbp1b; penicillin-binding protein 1B
D JW886_00305 penicillin-binding protein 1A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D JW886_02630 penicillin-binding protein 2 K00687 pbp2B; penicillin-binding protein 2B
D JW886_04660 penicillin-binding protein K12556 pbp2X; penicillin-binding protein 2X
D JW886_01015 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JW886_05020 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JW886_00810 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JW886_03175 C40 family peptidase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JW886_09600 CHAP domain-containing protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D JW886_09380 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JW886_04225 class C sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JW886_05515 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JW886_03710 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:lti01004]
D JW886_04300 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JW886_04290 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JW886_04310 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JW886_04305 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JW886_04380 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JW886_03380 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JW886_04320 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D JW886_03385 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D JW886_01300 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D JW886_05160 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D JW886_01460 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lti01008]
D JW886_00795 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:lti01006]
D JW886_04620 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JW886_00390 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JW886_03660 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JW886_01900 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:lti01007]
D JW886_00060 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JW886_02830 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JW886_01275 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JW886_08715 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JW886_09545 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JW886_04370 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JW886_08770 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JW886_00550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JW886_04450 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JW886_02795 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JW886_09230 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JW886_08600 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JW886_09235 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JW886_05410 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JW886_05415 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JW886_08070 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JW886_00375 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JW886_09055 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JW886_08130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JW886_09165 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JW886_09160 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JW886_01775 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JW886_01225 pyridoxal phosphate-dependent aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D JW886_05815 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JW886_09085 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JW886_06170 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JW886_03525 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lti00194]
D JW886_08310 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JW886_08315 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JW886_08320 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JW886_08325 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JW886_08330 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JW886_08335 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JW886_08345 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JW886_08340 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lti03000]
D JW886_03605 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JW886_07285 LysR family transcriptional regulator K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D JW886_03445 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D JW886_05050 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D JW886_07785 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JW886_07975 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JW886_06810 GntR family transcriptional regulator K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor
D JW886_02380 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D JW886_06515 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D JW886_05805 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D JW886_01325 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JW886_06020 MarR family transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D JW886_00700 MerR family transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D JW886_06665 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JW886_04040 Crp/Fnr family transcriptional regulator K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D JW886_07295 winged helix-turn-helix transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D JW886_09750 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D JW886_09175 PadR family transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator
D JW886_02490 helix-turn-helix transcriptional regulator K26742 lmrR; PadR family transcriptional regulator, multidrug transcriptional repressor LmrR
D JW886_00080 helix-turn-helix transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D JW886_06045 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JW886_08960 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JW886_09320 nicotinamide-nucleotide adenylyltransferase K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D JW886_01690 helix-turn-helix domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D JW886_02165 Rgg/GadR/MutR family transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D JW886_02515 helix-turn-helix domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D JW886_09455 helix-turn-helix domain-containing protein K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D JW886_00995 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D JW886_05280 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D JW886_01780 codY; GTP-sensing pleiotropic transcriptional regulator CodY K03706 codY; transcriptional pleiotropic repressor
D JW886_02595 helix-turn-helix transcriptional regulator K07729 K07729; putative transcriptional regulator
D JW886_06590 PRD domain-containing protein K03488 licT; beta-glucoside operon transcriptional antiterminator
D JW886_01195 transcription antiterminator K03483 mtlR; mannitol operon transcriptional activator
D JW886_01385 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JW886_09550 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D JW886_04630 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D JW886_05025 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D JW886_03720 CtsR family transcriptional regulator K03708 ctsR; transcriptional regulator of stress and heat shock response
D JW886_08970 PspC domain-containing protein K03973 pspC; phage shock protein C
D JW886_07265 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JW886_04185 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D JW886_00465 sigma-70 family RNA polymerase sigma factor K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:lti03021]
D JW886_00130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JW886_08455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JW886_08450 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JW886_03705 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D JW886_08930 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JW886_03335 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D JW886_04255 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JW886_03950 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JW886_00285 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JW886_03715 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:lti03019]
D JW886_04395 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JW886_02425 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JW886_07375 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JW886_08940 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D JW886_04955 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JW886_05810 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JW886_09120 3'-5' exoribonuclease YhaM family protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D JW886_02685 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JW886_02950 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D JW886_08495 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JW886_03735 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JW886_08730 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JW886_06305 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D JW886_05035 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JW886_02875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JW886_03360 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D JW886_05075 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:lti03011]
D JW886_04525 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JW886_00480 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JW886_00230 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JW886_02375 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JW886_00175 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JW886_00645 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JW886_01005 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JW886_00190 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JW886_00950 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JW886_00265 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JW886_00135 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JW886_01010 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JW886_00140 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JW886_00195 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JW886_08870 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JW886_07110 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JW886_00215 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JW886_00635 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JW886_00240 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JW886_08185 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JW886_02135 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D JW886_09395 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JW886_00245 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JW886_00260 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JW886_00255 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JW886_00200 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JW886_00185 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JW886_04160 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JW886_06090 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JW886_09400 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JW886_06085 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JW886_00955 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JW886_00210 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JW886_00165 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JW886_00225 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JW886_00125 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JW886_00180 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JW886_04690 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JW886_08660 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JW886_05350 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JW886_00235 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JW886_00250 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JW886_00205 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JW886_05360 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JW886_01930 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JW886_00220 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JW886_00170 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JW886_07215 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JW886_01375 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JW886_01370 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JW886_00295 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JW886_03780 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JW886_01635 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JW886_08665 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JW886_00145 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JW886_01180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00445 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00585 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00930 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_01045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_03255 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_09030 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_00600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_00945 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_01060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_09045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_03240 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_01050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_03250 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_09035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00450 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00590 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:lti03009]
D JW886_04395 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JW886_02690 era; GTPase Era K03595 era; GTPase
D JW886_07170 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JW886_04255 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JW886_03950 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JW886_00285 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JW886_00865 rRNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D JW886_03930 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JW886_08885 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JW886_06545 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D JW886_00505 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JW886_01430 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JW886_06350 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JW886_04650 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JW886_02915 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JW886_04625 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D JW886_09340 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D JW886_06275 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D JW886_08815 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JW886_00405 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D JW886_02175 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D JW886_01885 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JW886_05735 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D JW886_06120 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JW886_02750 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JW886_00310 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JW886_05200 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JW886_06385 rRNA large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D JW886_02440 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JW886_02445 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D JW886_07090 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D JW886_01425 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D JW886_01650 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JW886_08710 Mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D JW886_02685 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JW886_02950 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D JW886_09150 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JW886_04210 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D JW886_06185 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D JW886_02080 hflX; GTPase HflX K03665 hflX; GTPase
D JW886_02070 yqeH; ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D JW886_03510 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JW886_01435 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JW886_04275 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D JW886_04250 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D JW886_09260 yaaA; S4 domain-containing protein YaaA K14761 rlbA; ribosome-associated protein
D JW886_02105 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D JW886_05370 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D JW886_02085 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D JW886_03730 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D JW886_01095 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D JW886_07210 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lti03016]
D JW886_03685 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D JW886_07060 CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JW886_00375 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JW886_08770 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JW886_04450 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JW886_04370 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JW886_09545 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JW886_02795 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JW886_09230 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JW886_08130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JW886_08600 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D JW886_09055 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JW886_08070 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JW886_08715 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JW886_00550 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JW886_09235 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JW886_09165 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JW886_09160 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JW886_02830 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JW886_01275 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JW886_01445 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JW886_09360 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JW886_04180 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JW886_03080 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JW886_05540 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JW886_03170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_08745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_03510 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JW886_03660 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JW886_00870 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D JW886_08695 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JW886_01620 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JW886_07805 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D JW886_05410 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D JW886_05415 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D JW886_00060 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D JW886_02545 aminoacyl-tRNA deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D JW886_09505 prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D JW886_04055 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JW886_05885 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JW886_07085 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JW886_05315 tRNA (adenine-N(1))-methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D JW886_05625 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D JW886_03545 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D JW886_04515 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JW886_07155 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D JW886_05120 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D JW886_06450 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D JW886_01735 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D JW886_02805 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D JW886_01135 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JW886_02435 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JW886_02450 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JW886_03060 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JW886_02115 nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D JW886_04955 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JW886_05810 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D JW886_08730 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:lti03012]
D JW886_04270 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JW886_08670 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JW886_05290 ABC-F family ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D JW886_00475 elongation factor Ts K02357 tsf; elongation factor Ts
D JW886_08755 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JW886_01000 fusA; elongation factor G K02355 fusA; elongation factor G
D JW886_03485 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JW886_09420 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D JW886_03500 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JW886_01105 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JW886_00150 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JW886_03940 efp; elongation factor P K02356 efp; elongation factor P
D JW886_05125 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D JW886_02680 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lti03110]
D JW886_06905 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JW886_03725 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JW886_03340 ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D JW886_05635 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JW886_05035 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JW886_02875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JW886_00785 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JW886_09185 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D JW886_05030 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JW886_00740 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D JW886_02870 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JW886_00410 serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D JW886_01145 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JW886_08340 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JW886_02755 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JW886_04785 Cof-type HAD-IIB family hydrolase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D JW886_04790 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D JW886_08135 peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D JW886_07765 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:lti04131]
D JW886_04140 flotillin family protein K07192 FLOT; flotillin
D JW886_06735 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D JW886_00885 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW886_03350 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW886_02625 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_08080 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_06300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lti03032]
D JW886_03605 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JW886_03165 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JW886_04745 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JW886_01065 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JW886_04165 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JW886_03330 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JW886_04190 DnaD domain protein K03346 dnaB; replication initiation and membrane attachment protein
D JW886_04195 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D JW886_00640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_02865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JW886_00370 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JW886_01070 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JW886_07815 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JW886_02900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JW886_05175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JW886_00665 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JW886_06180 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JW886_00985 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D JW886_00440 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JW886_03000 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JW886_05505 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JW886_04840 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JW886_05185 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JW886_05165 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JW886_05880 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lti03036]
D JW886_03605 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JW886_04395 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JW886_04140 flotillin family protein K07192 FLOT; flotillin
D JW886_03165 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JW886_04745 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JW886_01065 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JW886_09490 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D JW886_01325 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JW886_04400 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D JW886_06130 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D JW886_06125 segregation/condensation protein B K06024 scpB; segregation and condensation protein B
D JW886_08805 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JW886_01120 septum formation initiator family protein K13052 divIC; cell division protein DivIC
D JW886_05130 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JW886_07825 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JW886_04655 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D JW886_07175 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D JW886_03785 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D JW886_05135 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JW886_08800 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JW886_00470 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D JW886_08775 DivIVA domain-containing protein K04074 divIVA; cell division initiation protein
D JW886_08790 cell division protein SepF K09772 sepF; cell division inhibitor SepF
D JW886_00820 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D JW886_00815 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D JW886_04805 FtsW/RodA/SpoVE family cell cycle protein K05837 rodA; rod shape determining protein RodA
D JW886_01385 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JW886_05185 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JW886_05165 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JW886_08695 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D JW886_06350 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JW886_05885 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D JW886_05640 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
D JW886_05085 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lti03400]
D JW886_05190 MGMT family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JW886_02130 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JW886_04555 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JW886_05310 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JW886_00825 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JW886_05525 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JW886_01870 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JW886_05530 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JW886_02700 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JW886_04365 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JW886_03695 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D JW886_03000 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JW886_00440 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JW886_08565 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JW886_03365 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JW886_04550 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JW886_05520 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JW886_08455 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JW886_08450 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JW886_00130 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JW886_03705 DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D JW886_08930 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JW886_01110 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JW886_00730 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D JW886_07770 endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D JW886_00720 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D JW886_04605 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JW886_04610 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JW886_03135 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JW886_00370 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D JW886_01070 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JW886_07815 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JW886_02900 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JW886_05175 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JW886_00665 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JW886_00640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_02865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_08190 ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JW886_02705 recA; recombinase RecA K03553 recA; recombination protein RecA
D JW886_00715 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JW886_00710 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JW886_07650 RusA family crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]
D JW886_08925 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JW886_00095 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JW886_09265 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JW886_00880 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JW886_01230 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JW886_02635 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JW886_04635 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JW886_03200 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D JW886_01080 addA; helicase-exonuclease AddAB subunit AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D JW886_01075 rexB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D JW886_05505 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JW886_04840 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JW886_05880 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JW886_03165 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JW886_04745 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JW886_08495 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JW886_09500 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JW886_01575 Y-family DNA polymerase K03502 umuC; DNA polymerase V
D JW886_00580 recX; recombination regulator RecX K03565 recX; regulatory protein
D JW886_08620 3'-5' exonuclease K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D JW886_05145 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JW886_05140 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JW886_04120 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lti03029]
D JW886_04270 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JW886_08670 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JW886_00475 elongation factor Ts K02357 tsf; elongation factor Ts
D JW886_08755 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JW886_01000 fusA; elongation factor G K02355 fusA; elongation factor G
D JW886_02690 era; GTPase Era K03595 era; GTPase
D JW886_02830 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JW886_04450 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JW886_09230 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JW886_09545 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JW886_01790 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JW886_01800 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JW886_01785 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JW886_00640 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_02865 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JW886_05035 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JW886_05030 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JW886_02875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JW886_02870 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JW886_00785 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JW886_03170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_08745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_01625 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JW886_03390 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lti02000]
D JW886_06110 ATP-binding cassette domain-containing protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_06105 ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_04015 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JW886_02495 lmrC; multidrug efflux ABC transporter LmrCD subunit C K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_02500 lmrD; multidrug efflux ABC transporter LmrCD subunit D K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_02220 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_02225 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JW886_02530 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JW886_04005 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D JW886_04000 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D JW886_04820 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D JW886_07045 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D JW886_05710 ABC transporter substrate-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D JW886_05705 ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D JW886_05700 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D JW886_05695 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D JW886_06565 ABC transporter permease/substrate binding protein K02001 proW; glycine betaine/proline transport system permease protein
D JW886_06570 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D JW886_04590 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D JW886_04585 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D JW886_03015 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JW886_08005 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D JW886_08010 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JW886_08015 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JW886_06720 extracellular solute-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D JW886_06730 sugar ABC transporter permease K17319 lplB; putative aldouronate transport system permease protein
D JW886_06725 carbohydrate ABC transporter permease K17320 lplC; putative aldouronate transport system permease protein
D JW886_06520 BMP family protein K07335 bmpA; basic membrane protein A and related proteins
D JW886_06285 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JW886_06290 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JW886_06280 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JW886_08110 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JW886_08115 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D JW886_08105 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JW886_08100 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JW886_08090 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JW886_08095 pstB; phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JW886_08295 amino acid ABC transporter substrate-binding protein/permease K10036 glnH; glutamine transport system substrate-binding protein
D JW886_08300 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D JW886_04925 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JW886_04930 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D JW886_04935 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JW886_03370 transporter substrate-binding domain-containing protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D JW886_08440 amino acid ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D JW886_08435 amino acid ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D JW886_02565 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JW886_02555 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JW886_02560 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JW886_02575 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JW886_02570 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JW886_00045 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JW886_02770 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JW886_02760 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JW886_02765 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JW886_02650 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JW886_02655 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JW886_02660 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JW886_02665 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JW886_02670 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D JW886_02675 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JW886_08635 oligopeptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JW886_08645 oppB; murein tripeptide/oligopeptide ABC transporter permease OppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JW886_08640 oppC; murein tripeptide/oligopeptide ABC transporter permease OppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JW886_08655 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JW886_08650 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D JW886_02615 iron-hydroxamate ABC transporter substrate-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D JW886_02605 iron ABC transporter permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D JW886_02610 iron ABC transporter permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D JW886_02600 ABC transporter ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D JW886_00325 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D JW886_00315 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D JW886_00320 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D JW886_06680 metal ABC transporter substrate-binding protein K19971 psaA; manganese/zinc transport system substrate-binding protein
D JW886_06685 metal ABC transporter permease K19972 psaC; manganese/zinc transport system permease protein
D JW886_06690 metal ABC transporter ATP-binding protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D JW886_02540 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JW886_04475 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JW886_02580 ECF-type riboflavin transporter substrate-binding protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D JW886_00050 ECF transporter S component K16927 cbrT; energy-coupling factor transport system substrate-specific component
D JW886_02340 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JW886_02590 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JW886_02330 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JW886_02335 energy-coupling factor transporter ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JW886_02585 energy-coupling factor ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JW886_08235 ABC transporter permease K19084 braE; bacitracin transport system permease protein
D JW886_08240 ABC transporter ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D JW886_05095 ABC transporter permease K25149 narB; polyether ionophore transport system permease protein
D JW886_05090 ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D JW886_05135 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JW886_05130 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JW886_09350 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D JW886_09355 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D JW886_01980 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JW886_08365 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JW886_01985 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JW886_08370 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JW886_00975 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JW886_03745 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JW886_04675 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JW886_05455 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JW886_00980 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JW886_03740 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JW886_04680 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JW886_05450 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JW886_08420 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JW886_06025 MATE family efflux transporter K18908 mepA; MATE family, multidrug efflux pump
D JW886_01810 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D JW886_00275 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D JW886_01360 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D JW886_02475 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D JW886_01545 MFS transporter K08153 blt; MFS transporter, DHA1 family, multidrug resistance protein
D JW886_01610 multidrug efflux MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D JW886_03775 multidrug efflux MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D JW886_06215 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D JW886_00510 MFS transporter K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D JW886_00515 MFS transporter K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D JW886_03815 multidrug efflux MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D JW886_01490 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JW886_01485 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D JW886_02385 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D JW886_02390 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JW886_07950 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JW886_06585 PTS glucose transporter subunit IIA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D JW886_05060 PTS sugar transporter subunit IIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D JW886_01200 PTS sugar transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D JW886_01190 PTS transporter subunit EIIC K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D JW886_02970 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D JW886_02965 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D JW886_01850 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_02980 PTS sugar transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_08505 celB; PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D JW886_08040 PTS sugar transporter subunit IIB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D JW886_08045 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D JW886_08050 PTS mannose/fructose/sorbose transporter family subunit IID K02796 manZ; mannose PTS system EIID component
D JW886_00030 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D JW886_02185 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D JW886_07405 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D JW886_07195 ammonium transporter K03320 amt; ammonium transporter, Amt family
D JW886_05100 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D JW886_00270 mscL; large-conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D JW886_06175 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D JW886_03760 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D JW886_03865 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D JW886_06210 magnesium transporter CorA family protein K03284 corA; magnesium transporter
D JW886_01725 DUF1211 domain-containing protein K24915 TMEM175; TMEM175 potassium channel family protein
D JW886_04735 DUF1211 domain-containing protein K24915 TMEM175; TMEM175 potassium channel family protein
D JW886_08540 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JW886_02305 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D JW886_04245 CidA/LrgA family protein K06518 cidA; holin-like protein
D JW886_09305 MFS transporter K16209 lacS; lactose/raffinose/galactose permease
D JW886_00655 amino acid permease K11733 lysP; lysine-specific permease
D JW886_02780 amino acid permease K11733 lysP; lysine-specific permease
D JW886_09510 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D JW886_09530 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D JW886_07300 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JW886_01540 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D JW886_05785 hypothetical protein K18924 ykkC; paired small multidrug resistance pump
D JW886_01020 GRP family sugar transporter K05340 glcU; glucose uptake protein
D JW886_08275 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JW886_00605 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D JW886_02820 sodium:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D JW886_05265 cation:proton antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D JW886_09080 cation:proton antiporter K26730 napA; Na+:H+ antiporter
D JW886_07260 uracil-xanthine permease K02824 uraA; uracil permease
D JW886_05620 purine permease K16169 pbuX; xanthine permease
D JW886_08160 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JW886_07915 ClC family H(+)/Cl(-) exchange transporter K03281 clcA; chloride channel protein, CIC family
D JW886_05425 voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D JW886_09065 Nramp family divalent metal transporter K03322 mntH; manganese transport protein
D JW886_09110 AEC family transporter K24180 mleP; malate permease and related proteins
D JW886_03630 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D JW886_07350 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D JW886_07345 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D JW886_04990 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D JW886_06115 ECF transporter S component K23675 fmnP; riboflavin transporter
D JW886_02550 thiT; energy-coupled thiamine transporter ThiT K16789 thiT; thiamine transporter
D JW886_05685 hypothetical protein K16788 niaX; niacin transporter
D JW886_06655 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D JW886_06660 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D JW886_03785 FtsW/RodA/SpoVE family cell cycle protein K03588 ftsW; cell division protein FtsW
D JW886_04730 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D JW886_01915 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D JW886_01910 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D JW886_03455 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D JW886_07380 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:lti02044]
D JW886_08785 YggT family protein K02221 yggT; YggT family protein
D JW886_08360 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D JW886_05590 dCMP deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D JW886_08355 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D JW886_05390 DEAD/DEAH box helicase K02240 comFA; competence protein ComFA
D JW886_05385 ComF family protein K02242 comFC; competence protein ComFC
D JW886_00365 tadA; Flp pilus assembly complex ATPase component TadA K02243 comGA; competence protein ComGA
D JW886_00360 type II secretion system F family protein K02244 comGB; competence protein ComGB
D JW886_00355 prepilin-type N-terminal cleavage/methylation domain-containing protein K02245 comGC; competence protein ComGC
D JW886_00350 type II secretion system protein K02246 comGD; competence protein ComGD
D JW886_00340 competence protein ComGF K02248 comGF; competence protein ComGF
D JW886_09495 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JW886_01475 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JW886_00290 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JW886_04950 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JW886_00160 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JW886_07365 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JW886_04435 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JW886_00395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JW886_01625 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JW886_03390 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:lti02042]
D JW886_03440 TDT family transporter K11041 eta; exfoliative toxin A/B
D JW886_08540 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JW886_03140 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lti02022]
D JW886_02885 cell wall metabolism sensor histidine kinase WalK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D JW886_02890 response regulator transcription factor K07668 vicR; two-component system, OmpR family, response regulator VicR
D JW886_08220 sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D JW886_08225 response regulator transcription factor K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D JW886_07965 HAMP domain-containing histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D JW886_07970 response regulator transcription factor K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D JW886_07200 HAMP domain-containing protein K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D JW886_07205 response regulator transcription factor K18941 arlR; two-component system, OmpR family, response regulator ArlR
D JW886_06510 GHKL domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JW886_04775 sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D JW886_04780 response regulator transcription factor K11618 liaR; two-component system, NarL family, response regulator LiaR
C 02035 Bacterial motility proteins [BR:lti02035]
D JW886_04925 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lti04812]
D JW886_08800 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JW886_08805 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D JW886_01385 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lti04147]
D JW886_03735 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JW886_00885 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW886_03350 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JW886_02145 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JW886_06300 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JW886_02755 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JW886_04140 flotillin family protein K07192 FLOT; flotillin
D JW886_02875 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JW886_05035 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JW886_00525 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JW886_02065 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JW886_08755 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JW886_09360 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JW886_05550 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_06295 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D JW886_07120 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JW886_00155 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JW886_03700 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JW886_01605 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JW886_01600 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JW886_09295 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JW886_01680 alpha amylase C-terminal domain-containing protein K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JW886_02195 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JW886_00695 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JW886_03530 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JW886_06880 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JW886_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JW886_00775 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JW886_05560 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JW886_02625 phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JW886_08080 histidine phosphatase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lti02048]
D JW886_06935 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JW886_06910 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JW886_06920 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JW886_06930 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JW886_03610 DNA adenine methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D JW886_09460 class I SAM-dependent methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D JW886_03605 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D JW886_09595 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J
D JW886_08970 PspC domain-containing protein K03973 pspC; phage shock protein C
D JW886_08800 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JW886_05185 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D JW886_05165 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D JW886_03170 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JW886_08745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lti01504]
D JW886_02475 MFS transporter K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D JW886_04820 abc-f; ABC-F type ribosomal protection protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D JW886_05020 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JW886_06075 dltA; D-alanine--poly(phosphoribitol) ligase subunit DltA K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D JW886_06070 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D JW886_06065 dltC; D-alanine--poly(phosphoribitol) ligase subunit DltC K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D JW886_06060 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D JW886_04015 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D JW886_06020 MarR family transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D JW886_06025 MATE family efflux transporter K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lti03100]
D JW886_00455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_00595 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_00940 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_01055 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_03245 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_09040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JW886_03075 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_07855 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_02365 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_03290 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_03675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JW886_01185 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JW886_01035 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JW886_03265 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JW886_09020 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JW886_02995 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JW886_00905 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JW886_07755 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JW886_01040 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JW886_01150 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JW886_03285 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JW886_09000 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JW886_01170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JW886_03315 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JW886_00910 tRNA-His K14226 tRNA-His; tRNA His
D JW886_03320 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JW886_01175 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JW886_03275 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_09010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_01530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_02205 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_00755 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_00900 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_08995 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JW886_01215 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JW886_03270 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JW886_03680 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JW886_09015 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JW886_03895 tRNA-Met K14230 tRNA-Met; tRNA Met
D JW886_01160 tRNA-Met K14230 tRNA-Met; tRNA Met
D JW886_03300 tRNA-Met K14230 tRNA-Met; tRNA Met
D JW886_03305 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JW886_07430 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JW886_07445 tRNA-Ile K14230 tRNA-Met; tRNA Met
D JW886_01165 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JW886_03310 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JW886_02370 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JW886_03295 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JW886_03325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JW886_02325 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JW886_01155 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JW886_01595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JW886_00115 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JW886_03280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JW886_09005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JW886_01730 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JW886_00915 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JW886_00920 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JW886_00925 tRNA-Val K14237 tRNA-Val; tRNA Val
D JW886_03260 tRNA-Val K14237 tRNA-Val; tRNA Val
D JW886_09025 tRNA-Val K14237 tRNA-Val; tRNA Val
D JW886_00460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_00600 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_00945 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_01060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_09045 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_03240 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JW886_01050 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00935 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_03250 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_09035 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00450 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_00590 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JW886_01180 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00445 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00585 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_00930 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_01045 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_03255 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_09030 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JW886_04060 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D JW886_07805 rnpB; RNase P RNA component class B K01978 rnpB; M1 RNA
D JW886_06475 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JW886_09315 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D JW886_07860 alpha-hydroxy-acid oxidizing protein K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D JW886_04715 N(5)-(carboxyethyl)ornithine synthase K00298 ceo; N5-(carboxyethyl)ornithine synthase [EC:1.5.1.24]
D JW886_07355 NADPH-dependent F420 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D JW886_05405 zinc-binding dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JW886_01470 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D JW886_02815 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D JW886_07035 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JW886_09410 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JW886_05725 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D JW886_04455 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D JW886_02465 peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JW886_01280 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JW886_00520 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JW886_07780 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JW886_07475 arsC; arsenate reductase (thioredoxin) K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JW886_02280 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D JW886_08535 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D JW886_01670 SDR family oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D JW886_07930 SDR family NAD(P)-dependent oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-]
D JW886_08955 class I SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JW886_07800 class I SAM-dependent RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D JW886_06195 GNAT family N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D JW886_06820 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JW886_07990 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D JW886_03910 GNAT family N-acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D JW886_03585 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JW886_02790 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JW886_05510 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JW886_01920 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D JW886_00965 DegV family EDD domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D JW886_01525 GGDEF domain-containing protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D JW886_01590 GGDEF domain-containing protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D JW886_09765 GGDEF domain-containing protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D JW886_03025 cdaA; diadenylate cyclase CdaA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D JW886_03580 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D JW886_08350 esterase family protein K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D JW886_08630 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JW886_00780 YqeG family HAD IIIA-type phosphatase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D JW886_04155 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D JW886_03915 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JW886_03925 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D JW886_07995 alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D JW886_03355 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JW886_09170 phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D JW886_09755 phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D JW886_05040 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D JW886_02215 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D JW886_00800 carboxylate--amine ligase K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D JW886_04595 cadA; cadmium-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D JW886_00895 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D JW886_03820 cation-transporting P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D JW886_06445 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D JW886_00110 cation-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D JW886_06055 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D JW886_08035 ferredoxin K05337 fer; ferredoxin
D JW886_08400 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D JW886_00055 FAD-dependent oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D JW886_07075 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D JW886_03145 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D JW886_05150 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
D JW886_01755 DNA/RNA non-specific endonuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D JW886_04530 VOC family protein K08234 yaeR; glyoxylase I family protein
D JW886_08795 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D JW886_01345 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JW886_01815 cold-shock protein K03704 cspA; cold shock protein
D JW886_03905 cold-shock protein K03704 cspA; cold shock protein
D JW886_07235 cold-shock protein K03704 cspA; cold shock protein
D JW886_03470 spx; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D JW886_03805 spx; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D JW886_03210 spx; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D JW886_06805 spx; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D JW886_04855 transcriptional regulator K16509 spxA; regulatory protein spx
D JW886_05285 spx; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D JW886_05960 hypothetical protein K16509 spxA; regulatory protein spx
D JW886_06235 spx; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D JW886_02400 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D JW886_04795 S1 RNA-binding domain-containing protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D JW886_03235 trigger factor K03545 tig; trigger factor
D JW886_08120 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D JW886_05155 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D JW886_08430 adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D JW886_05245 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D JW886_09125 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D JW886_08570 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D JW886_05875 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D JW886_05305 DnaD domain-containing protein K02086 dnaD; DNA replication protein
D JW886_09665 replication initiation factor domain-containing protein K07467 nicK; putative DNA relaxase
D JW886_07615 terminase K07474 xtmA; phage terminase small subunit
D JW886_01390 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D JW886_05925 IS6 family transposase K07498 K07498; putative transposase
D JW886_05935 IS6 family transposase K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D JW886_01500 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JW886_06830 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D JW886_02710 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D JW886_02715 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D JW886_08575 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D JW886_08580 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D JW886_04425 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D JW886_01455 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JW886_05570 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JW886_03985 peptide MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
C 99978 Cell growth
D JW886_07795 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D JW886_01630 protein jag K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D JW886_09470 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D JW886_05000 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D JW886_05365 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D JW886_05585 glycoside hydrolase family 25 protein K07273 acm; lysozyme
C 99994 Others
D JW886_08085 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D JW886_09345 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JW886_08585 Gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor
D JW886_05180 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D JW886_08150 competence protein CoiA K06198 coiA; competence protein CoiA
D JW886_02855 DUF4479 and tRNA-binding domain-containing protein K06878 K06878; tRNA-binding protein
D JW886_08690 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JW886_08395 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JW886_08415 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D JW886_03565 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D JW886_05865 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D JW886_02405 SprT family protein K03095 sprL; SprT-like protein
D JW886_08290 DedA family protein K03975 dedA; membrane-associated protein
D JW886_07940 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D JW886_04755 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D JW886_06635 DUF1304 domain-containing protein K08987 K08987; putative membrane protein
D JW886_08555 DUF1440 domain-containing protein K08996 yagU; putative membrane protein
D JW886_06555 psiE; phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE
C 99997 Function unknown
D JW886_06380 TPM domain-containing protein K06872 K06872; uncharacterized protein
D JW886_05335 HD domain-containing protein K06885 K06885; uncharacterized protein
D JW886_01535 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D JW886_07410 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D JW886_05905 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D JW886_08170 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D JW886_01750 CoA-binding protein K06929 K06929; uncharacterized protein
D JW886_00530 YkgJ family cysteine cluster protein K06940 K06940; uncharacterized protein
D JW886_01265 HD domain-containing protein K06950 K06950; uncharacterized protein
D JW886_08180 HD domain-containing protein K06950 K06950; uncharacterized protein
D JW886_07105 KH domain-containing protein K06960 K06960; uncharacterized protein
D JW886_04030 zinc ribbon domain-containing protein K07069 K07069; uncharacterized protein
D JW886_09070 nitroreductase family protein K07078 K07078; uncharacterized protein
D JW886_00765 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JW886_06145 metallophosphoesterase K07095 K07095; uncharacterized protein
D JW886_00630 metallophosphoesterase K07098 K07098; uncharacterized protein
D JW886_04845 metallophosphoesterase K07098 K07098; uncharacterized protein
D JW886_04390 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D JW886_03690 SDR family NAD(P)-dependent oxidoreductase K07124 K07124; uncharacterized protein
D JW886_05740 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D JW886_01030 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein
D JW886_07290 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D JW886_07955 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D JW886_05005 PFL family protein K09157 K09157; uncharacterized protein
D JW886_06740 glycoside hydrolase family 125 protein K09704 K09704; uncharacterized protein
D JW886_05205 divergent PAP2 family protein K09775 K09775; uncharacterized protein
D JW886_06480 putative DNA-binding protein K09787 K09787; uncharacterized protein
D JW886_05400 DUF475 domain-containing protein K09799 K09799; uncharacterized protein
D JW886_06470 DUF475 domain-containing protein K09799 K09799; uncharacterized protein
D JW886_09415 S1 RNA-binding domain-containing protein K00243 K00243; uncharacterized protein
D JW886_05380 nucleotidyltransferase family protein K09962 K09962; uncharacterized protein
D JW886_01845 DUF871 domain-containing protein K09963 K09963; uncharacterized protein
D JW886_06160 YneF family protein K09976 K09976; uncharacterized protein
D JW886_05355 ribosomal-processing cysteine protease Prp K07584 ysxB; uncharacterized protein
D JW886_05105 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein
D JW886_04260 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 21, 2024