+D GENES KO
#
KEGG Orthology (KO) - Limnobacter thiooxidans
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lto00010]
D RGQ30_23150 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGQ30_07780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGQ30_07300 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGQ30_12370 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGQ30_07250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGQ30_07280 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGQ30_01820 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGQ30_06900 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGQ30_12600 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGQ30_07290 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGQ30_15910 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGQ30_13470 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGQ30_13480 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_08190 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGQ30_20790 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D RGQ30_09200 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D RGQ30_23340 exaA; quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D RGQ30_09160 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RGQ30_22950 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGQ30_25880 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RGQ30_31860 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:lto00020]
D RGQ30_18690 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RGQ30_18970 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RGQ30_18920 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RGQ30_08910 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGQ30_18660 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RGQ30_18650 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_07740 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGQ30_07730 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGQ30_18720 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGQ30_18710 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGQ30_18740 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGQ30_18730 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGQ30_22970 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RGQ30_18760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGQ30_31860 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RGQ30_13470 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGQ30_13480 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:lto00030]
D RGQ30_23150 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGQ30_00660 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGQ30_04480 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGQ30_02400 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGQ30_02410 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGQ30_07240 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGQ30_24470 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RGQ30_13500 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RGQ30_25880 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RGQ30_03200 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGQ30_00650 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D RGQ30_00640 hypothetical protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RGQ30_09330 aldehyde ferredoxin oxidoreductase family protein K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D RGQ30_04650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGQ30_07300 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGQ30_07780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:lto00040]
D RGQ30_02640 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGQ30_09780 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGQ30_16140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGQ30_04480 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:lto00051]
D RGQ30_02920 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGQ30_25880 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RGQ30_02890 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGQ30_02900 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RGQ30_07780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGQ30_07300 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGQ30_12370 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGQ30_29790 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:lto00052]
D RGQ30_27440 galE_2; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGQ30_02480 galE_1; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGQ30_16140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGQ30_25880 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism [PATH:lto00053]
D RGQ30_02640 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGQ30_09780 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGQ30_02650 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGQ30_04280 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
C 00500 Starch and sucrose metabolism [PATH:lto00500]
D RGQ30_16140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGQ30_28960 bcsA_2; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D RGQ30_22410 bcsA_1; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D RGQ30_02440 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RGQ30_25880 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RGQ30_23150 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lto00520]
D RGQ30_15460 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RGQ30_28500 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGQ30_23740 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D RGQ30_28510 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D RGQ30_06930 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D RGQ30_08270 gph; phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D RGQ30_06500 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D RGQ30_06510 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D RGQ30_03540 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGQ30_07820 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGQ30_25880 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RGQ30_16140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGQ30_02640 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGQ30_09780 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGQ30_27440 galE_2; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGQ30_02480 galE_1; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGQ30_02650 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGQ30_04280 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGQ30_29790 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGQ30_23150 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGQ30_02920 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGQ30_02890 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGQ30_02900 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RGQ30_02440 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RGQ30_02430 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RGQ30_02420 rfbH; lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D RGQ30_02450 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RGQ30_19370 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:lto00620]
D RGQ30_22950 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGQ30_13470 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGQ30_13480 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_08190 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGQ30_20790 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D RGQ30_09200 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D RGQ30_23340 exaA; quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D RGQ30_07290 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGQ30_12880 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGQ30_05440 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGQ30_05430 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGQ30_14600 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGQ30_09160 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D RGQ30_07160 gloA_1; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RGQ30_14040 gloA_2; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D RGQ30_00700 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RGQ30_11830 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D RGQ30_06790 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RGQ30_18760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGQ30_22970 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RGQ30_00670 ppc_1; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGQ30_18890 ppc_2; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGQ30_31860 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D RGQ30_15910 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGQ30_21410 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_03160 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RGQ30_12330 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lto00630]
D RGQ30_10970 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D RGQ30_22950 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGQ30_21410 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D RGQ30_18760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGQ30_18690 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D RGQ30_18970 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RGQ30_18920 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18520 3-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RGQ30_05760 FAD-linked oxidase C-terminal domain-containing protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D RGQ30_05750 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D RGQ30_05740 glcF; glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D RGQ30_12300 catalase K03781 katE; catalase [EC:1.11.1.6]
D RGQ30_23370 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D RGQ30_26670 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RGQ30_04490 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGQ30_15220 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D RGQ30_06890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_06360 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D RGQ30_04650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGQ30_01330 dmlA; multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D RGQ30_00640 hypothetical protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D RGQ30_15110 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGQ30_15120 fdh3B; formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGQ30_15140 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D RGQ30_06380 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D RGQ30_26920 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:lto00640]
D RGQ30_22950 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGQ30_22980 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_29160 MDR family oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RGQ30_04560 MDR family oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_12880 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGQ30_05440 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGQ30_05430 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGQ30_14600 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGQ30_07730 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGQ30_07740 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGQ30_31520 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RGQ30_18860 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D RGQ30_18870 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D RGQ30_18880 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D RGQ30_18920 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RGQ30_18850 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:lto00650]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_27240 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_29180 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RGQ30_18540 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RGQ30_23290 alpha/beta fold hydrolase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D RGQ30_19440 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D RGQ30_18520 3-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D RGQ30_01330 dmlA; multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D RGQ30_18720 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGQ30_18710 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGQ30_18740 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGQ30_18730 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGQ30_07220 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGQ30_01590 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RGQ30_12560 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RGQ30_12570 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RGQ30_11090 bdhA; 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D RGQ30_02220 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGQ30_12270 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGQ30_12280 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:lto00660]
D RGQ30_02220 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGQ30_12270 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGQ30_12280 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGQ30_07730 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGQ30_07740 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGQ30_14500 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RGQ30_14520 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RGQ30_14530 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:lto00562]
D RGQ30_12790 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RGQ30_31520 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RGQ30_12370 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lto00190]
D RGQ30_12390 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D RGQ30_12400 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D RGQ30_12410 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D RGQ30_12420 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D RGQ30_12430 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D RGQ30_12440 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D RGQ30_12450 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D RGQ30_12460 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D RGQ30_12470 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D RGQ30_12480 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D RGQ30_12490 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D RGQ30_12500 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D RGQ30_12510 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D RGQ30_12520 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D RGQ30_22790 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D RGQ30_18720 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGQ30_18710 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGQ30_18740 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGQ30_18730 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGQ30_03700 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGQ30_03710 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGQ30_03720 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RGQ30_02010 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RGQ30_14000 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D RGQ30_01960 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D RGQ30_01920 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D RGQ30_01910 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D RGQ30_01940 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RGQ30_02000 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGQ30_29660 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RGQ30_29650 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RGQ30_29640 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RGQ30_29630 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RGQ30_13990 cyoC; cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D RGQ30_13980 cyoB; cytochrome o ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D RGQ30_13970 cyoA; ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D RGQ30_19300 nirM; cytochrome C-551 K08738 CYC; cytochrome c
D RGQ30_31750 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RGQ30_31730 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RGQ30_31740 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RGQ30_31760 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RGQ30_31720 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RGQ30_31790 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGQ30_31770 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGQ30_31780 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RGQ30_16410 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D RGQ30_11050 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lto00710]
D RGQ30_07280 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGQ30_07250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGQ30_07300 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGQ30_07780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGQ30_02400 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGQ30_02410 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGQ30_07240 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGQ30_13500 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D RGQ30_12370 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGQ30_04480 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D RGQ30_24470 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D RGQ30_00670 ppc_1; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGQ30_18890 ppc_2; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGQ30_06790 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D RGQ30_18760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:lto00720]
D RGQ30_15910 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGQ30_00670 ppc_1; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGQ30_18890 ppc_2; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGQ30_18760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGQ30_22970 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D RGQ30_18720 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D RGQ30_18710 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D RGQ30_18740 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D RGQ30_18730 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D RGQ30_07740 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D RGQ30_07730 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_08910 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGQ30_18970 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D RGQ30_18920 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D RGQ30_12880 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGQ30_05440 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGQ30_05430 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGQ30_14600 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGQ30_13440 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RGQ30_07900 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RGQ30_22950 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:lto00680]
D RGQ30_08190 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGQ30_08200 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D RGQ30_15110 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D RGQ30_15120 fdh3B; formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D RGQ30_15140 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D RGQ30_06890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGQ30_26670 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RGQ30_04650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGQ30_12600 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGQ30_00670 ppc_1; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGQ30_18890 ppc_2; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D RGQ30_18760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGQ30_07300 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D RGQ30_07780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGQ30_22950 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGQ30_15910 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D RGQ30_01820 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGQ30_06900 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGQ30_08320 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGQ30_18480 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:lto00910]
D RGQ30_18020 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGQ30_25680 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGQ30_18030 ntrB_1; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RGQ30_25670 ntrB_2; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RGQ30_18040 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGQ30_25660 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGQ30_05810 nitrate reductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D RGQ30_05790 nirB; nitrite reductase large subunit NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D RGQ30_05800 nirD; nitrite reductase small subunit NirD K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D RGQ30_11490 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RGQ30_25740 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGQ30_27820 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGQ30_27810 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGQ30_25650 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D RGQ30_30200 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:lto00920]
D RGQ30_25040 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RGQ30_25070 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RGQ30_24730 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RGQ30_24720 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RGQ30_24710 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RGQ30_24770 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGQ30_24800 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGQ30_24760 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RGQ30_24820 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D RGQ30_24750 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGQ30_24830 ssuB; aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGQ30_24810 ssuD; FMNH2-dependent alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D RGQ30_24740 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RGQ30_02620 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RGQ30_06290 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RGQ30_02610 hypothetical protein K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGQ30_06300 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGQ30_02580 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RGQ30_06310 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D RGQ30_14120 soxA; sulfur oxidation c-type cytochrome SoxA K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RGQ30_14130 hypothetical protein K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D RGQ30_09180 hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY
D RGQ30_14100 soxY; thiosulfate oxidation carrier protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D RGQ30_14110 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D RGQ30_14140 soxB; thiosulfohydrolase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D RGQ30_14080 soxC; sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC
D RGQ30_14090 hypothetical protein K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D RGQ30_23440 sulfite reductase subunit alpha K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D RGQ30_06330 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D RGQ30_09850 NAD(P)/FAD-dependent oxidoreductase K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D RGQ30_09860 hypothetical protein K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D RGQ30_27480 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_12810 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_25020 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_29760 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RGQ30_11750 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RGQ30_15520 3-(methylthio)propionyl-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RGQ30_17850 3-(methylthio)propionyl-CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D RGQ30_27250 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D RGQ30_23890 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lto00061]
D RGQ30_12880 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D RGQ30_05440 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D RGQ30_05430 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D RGQ30_14600 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D RGQ30_15330 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RGQ30_21280 hypothetical protein K02078 acpP; acyl carrier protein
D RGQ30_15310 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGQ30_15300 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RGQ30_15340 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGQ30_09120 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGQ30_15320 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGQ30_15980 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGQ30_13590 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGQ30_22200 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RGQ30_04110 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_13130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_16250 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_22040 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lto00071]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_27230 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_22050 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_27240 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGQ30_29980 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGQ30_30310 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGQ30_22070 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGQ30_23610 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGQ30_11710 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D RGQ30_17140 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D RGQ30_03980 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D RGQ30_12170 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D RGQ30_04110 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_13130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_16250 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_22040 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_22150 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RGQ30_12120 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1]
D RGQ30_08190 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lto00561]
D RGQ30_04650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGQ30_17900 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGQ30_15290 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RGQ30_05690 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGQ30_07180 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGQ30_25900 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGQ30_28990 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RGQ30_07090 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D RGQ30_13600 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
C 00564 Glycerophospholipid metabolism [PATH:lto00564]
D RGQ30_01860 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D RGQ30_17890 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D RGQ30_05690 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGQ30_07180 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGQ30_25900 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGQ30_28860 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RGQ30_06120 ugpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D RGQ30_12320 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGQ30_12310 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RGQ30_17110 asd_2; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D RGQ30_18180 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D RGQ30_07690 hypothetical protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D RGQ30_27340 clsB; cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D RGQ30_11310 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:lto00565]
D RGQ30_28860 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:lto00600]
D RGQ30_23390 cerN; ceramidase CerN K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
C 00590 Arachidonic acid metabolism
D RGQ30_28860 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D RGQ30_28860 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:lto00592]
D RGQ30_28860 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D RGQ30_27230 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_22050 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:lto01040]
D RGQ30_09030 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RGQ30_21370 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RGQ30_05960 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D RGQ30_22480 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D RGQ30_05950 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D RGQ30_22470 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D RGQ30_18270 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RGQ30_27120 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lto00230]
D RGQ30_00690 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RGQ30_25880 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RGQ30_03200 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D RGQ30_14640 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RGQ30_26230 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D RGQ30_09010 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RGQ30_15710 purT; formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D RGQ30_18240 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D RGQ30_07460 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D RGQ30_07330 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D RGQ30_07320 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D RGQ30_07310 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D RGQ30_26810 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RGQ30_07130 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGQ30_14310 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGQ30_22260 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D RGQ30_18560 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RGQ30_15830 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RGQ30_14360 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGQ30_10880 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D RGQ30_15810 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGQ30_10830 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D RGQ30_05110 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGQ30_05120 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RGQ30_27840 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D RGQ30_10780 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGQ30_11040 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D RGQ30_11070 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D RGQ30_11920 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D RGQ30_19640 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGQ30_05400 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D RGQ30_08820 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RGQ30_25890 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D RGQ30_02620 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RGQ30_06290 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RGQ30_02610 hypothetical protein K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGQ30_06300 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGQ30_17350 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGQ30_17360 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGQ30_17370 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:lto00240]
D RGQ30_23820 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGQ30_23830 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGQ30_25920 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RGQ30_04660 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RGQ30_25910 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D RGQ30_16700 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D RGQ30_28730 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D RGQ30_25100 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D RGQ30_16080 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D RGQ30_14360 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGQ30_26420 Maf family protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D RGQ30_12580 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D RGQ30_08370 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D RGQ30_14310 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGQ30_22260 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D RGQ30_25930 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RGQ30_16840 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D RGQ30_05110 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGQ30_05120 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D RGQ30_15580 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D RGQ30_08960 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGQ30_13550 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lto00250]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGQ30_26090 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RGQ30_14970 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RGQ30_13260 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RGQ30_27070 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D RGQ30_07840 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGQ30_16450 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGQ30_19640 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D RGQ30_26810 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D RGQ30_25920 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D RGQ30_07220 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D RGQ30_27820 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGQ30_27810 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D RGQ30_25740 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGQ30_23820 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGQ30_23830 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGQ30_28500 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGQ30_14640 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:lto00260]
D RGQ30_14650 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGQ30_14540 asd_1; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGQ30_26340 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGQ30_13270 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGQ30_08680 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D RGQ30_13280 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D RGQ30_06890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGQ30_26670 2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D RGQ30_04650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D RGQ30_01820 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGQ30_06900 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGQ30_08320 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGQ30_18480 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_12320 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D RGQ30_28600 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGQ30_14590 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RGQ30_14580 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGQ30_10070 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RGQ30_10060 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D RGQ30_10080 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D RGQ30_10090 thpD; ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
C 00270 Cysteine and methionine metabolism [PATH:lto00270]
D RGQ30_27480 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_12810 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_25020 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_16810 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGQ30_30640 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGQ30_17210 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RGQ30_07930 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGQ30_17100 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D RGQ30_18560 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D RGQ30_08300 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D RGQ30_16130 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D RGQ30_31200 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGQ30_07920 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGQ30_14650 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGQ30_14540 asd_1; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGQ30_26340 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGQ30_13270 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGQ30_29760 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D RGQ30_11750 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D RGQ30_26950 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGQ30_29810 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RGQ30_29800 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGQ30_18760 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D RGQ30_23940 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D RGQ30_08320 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:lto00280]
D RGQ30_26950 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_29980 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGQ30_30310 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGQ30_22070 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGQ30_23610 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D RGQ30_01440 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_27230 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_22050 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_06090 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D RGQ30_31520 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D RGQ30_01580 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D RGQ30_01560 carboxyl transferase domain-containing protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D RGQ30_01570 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D RGQ30_01590 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RGQ30_12560 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D RGQ30_12570 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lto00290]
D RGQ30_28600 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D RGQ30_14500 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D RGQ30_14520 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D RGQ30_14530 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D RGQ30_02220 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGQ30_12270 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGQ30_12280 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGQ30_12290 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RGQ30_19280 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGQ30_26950 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGQ30_13260 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RGQ30_03160 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D RGQ30_12330 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:lto00300]
D RGQ30_26340 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGQ30_13270 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D RGQ30_14650 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGQ30_14540 asd_1; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGQ30_12700 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGQ30_19230 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D RGQ30_16200 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D RGQ30_07860 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGQ30_16190 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RGQ30_07960 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGQ30_27940 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGQ30_04720 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGQ30_04730 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lto00310]
D RGQ30_18650 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_07220 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:lto00220]
D RGQ30_07850 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D RGQ30_07840 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGQ30_16450 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGQ30_17350 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGQ30_17360 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGQ30_17370 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D RGQ30_23820 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D RGQ30_23830 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D RGQ30_25740 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGQ30_13260 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RGQ30_16800 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D RGQ30_04880 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D RGQ30_28540 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D RGQ30_07570 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D RGQ30_07860 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:lto00330]
D RGQ30_16820 arginine/lysine/ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D RGQ30_17100 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D RGQ30_14800 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_18900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_08540 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D RGQ30_05000 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RGQ30_08600 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D RGQ30_16860 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:lto00340]
D RGQ30_03550 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D RGQ30_19650 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D RGQ30_03630 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D RGQ30_03620 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D RGQ30_03600 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me thylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D RGQ30_03590 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D RGQ30_03610 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D RGQ30_03580 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D RGQ30_03570 hisC_1; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_08340 hisC_2; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_03560 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D RGQ30_25570 egtD; L-histidine N(alpha)-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:lto00350]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGQ30_03570 hisC_1; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_08340 hisC_2; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_08190 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGQ30_09840 hypothetical protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D RGQ30_07220 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:lto00360]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGQ30_03570 hisC_1; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_08340 hisC_2; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_26200 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D RGQ30_13900 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D RGQ30_14800 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_18900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:lto00380]
D RGQ30_06380 alpha/beta hydrolase K01432 AFMID; arylformamidase [EC:3.5.1.9]
D RGQ30_18650 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_11490 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RGQ30_14800 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_18900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_12300 catalase K03781 katE; catalase [EC:1.11.1.6]
D RGQ30_23370 catalase family peroxidase K03781 katE; catalase [EC:1.11.1.6]
D RGQ30_13900 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:lto00400]
D RGQ30_05580 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGQ30_27850 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D RGQ30_09750 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D RGQ30_05520 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D RGQ30_27860 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D RGQ30_08360 hypothetical protein K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D RGQ30_14470 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D RGQ30_04500 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGQ30_04520 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RGQ30_04530 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D RGQ30_14570 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D RGQ30_04540 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D RGQ30_14590 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D RGQ30_14580 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D RGQ30_08330 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D RGQ30_08350 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGQ30_03570 hisC_1; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_08340 hisC_2; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:lto00410]
D RGQ30_07380 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D RGQ30_07390 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_31520 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lto00450]
D RGQ30_16810 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D RGQ30_30640 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGQ30_17210 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D RGQ30_25000 hypothetical protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D RGQ30_16330 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D RGQ30_02620 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RGQ30_06290 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RGQ30_02610 hypothetical protein K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGQ30_06300 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGQ30_19100 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lto00460]
D RGQ30_11490 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RGQ30_14970 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D RGQ30_06890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:lto00470]
D RGQ30_18390 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGQ30_04790 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGQ30_06450 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RGQ30_04750 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGQ30_07960 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D RGQ30_27940 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D RGQ30_26200 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:lto00480]
D RGQ30_14850 pxpA; 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D RGQ30_14830 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D RGQ30_14840 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D RGQ30_29810 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D RGQ30_29800 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D RGQ30_06230 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGQ30_07790 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RGQ30_26800 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGQ30_02050 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGQ30_01210 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D RGQ30_08910 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D RGQ30_00660 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGQ30_08570 bsaA; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RGQ30_24160 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D RGQ30_04830 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D RGQ30_17100 hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:lto00540]
D RGQ30_15970 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RGQ30_04840 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RGQ30_15990 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RGQ30_12820 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RGQ30_15960 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RGQ30_08850 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RGQ30_03350 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RGQ30_12590 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RGQ30_03340 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RGQ30_08830 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RGQ30_27000 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RGQ30_07940 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGQ30_07950 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGQ30_21030 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGQ30_01370 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RGQ30_08420 hldA; ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RGQ30_07190 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RGQ30_24270 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RGQ30_08430 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RGQ30_27010 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RGQ30_26930 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RGQ30_26540 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lto00541]
D RGQ30_16140 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D RGQ30_27440 galE_2; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGQ30_02480 galE_1; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D RGQ30_02640 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGQ30_09780 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D RGQ30_02650 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGQ30_04280 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D RGQ30_02950 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGQ30_03000 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGQ30_02960 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGQ30_03020 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D RGQ30_02440 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D RGQ30_02430 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D RGQ30_02420 rfbH; lipopolysaccharide biosynthesis protein RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D RGQ30_02450 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RGQ30_19370 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D RGQ30_02920 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D RGQ30_02890 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D RGQ30_02900 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D RGQ30_28510 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
C 00550 Peptidoglycan biosynthesis [PATH:lto00550]
D RGQ30_03540 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGQ30_07820 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGQ30_04780 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RGQ30_04750 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGQ30_04720 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGQ30_04790 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGQ30_04730 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGQ30_16060 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGQ30_30770 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGQ30_04740 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGQ30_04770 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGQ30_05530 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGQ30_27920 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGQ30_28810 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGQ30_04710 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGQ30_28710 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGQ30_06720 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:lto00552]
D RGQ30_30770 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lto00543]
D RGQ30_27480 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_12810 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_25020 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D RGQ30_27420 exoY; exopolysaccharide production protein ExoY K16566 exoY; exopolysaccharide production protein ExoY
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lto00730]
D RGQ30_26160 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D RGQ30_26010 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D RGQ30_11380 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGQ30_08770 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGQ30_26060 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D RGQ30_26000 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D RGQ30_07680 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D RGQ30_06560 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RGQ30_08820 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:lto00740]
D RGQ30_07650 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RGQ30_06870 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RGQ30_07660 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D RGQ30_06860 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D RGQ30_09000 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D RGQ30_24740 ssuE; NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D RGQ30_00690 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D RGQ30_03760 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:lto00750]
D RGQ30_05710 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RGQ30_11270 hypothetical protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D RGQ30_08320 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D RGQ30_06470 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D RGQ30_15440 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D RGQ30_13280 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:lto00760]
D RGQ30_26090 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D RGQ30_26110 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D RGQ30_26100 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D RGQ30_14310 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D RGQ30_26390 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D RGQ30_16390 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D RGQ30_07700 pncC; nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D RGQ30_20210 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D RGQ30_19190 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D RGQ30_26740 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RGQ30_26750 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D RGQ30_26730 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D RGQ30_07220 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:lto00770]
D RGQ30_02220 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGQ30_12270 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D RGQ30_12280 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D RGQ30_12290 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D RGQ30_19280 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D RGQ30_07400 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D RGQ30_07390 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D RGQ30_28660 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D RGQ30_08970 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D RGQ30_03090 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D RGQ30_04920 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D RGQ30_15450 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D RGQ30_26330 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D RGQ30_26950 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGQ30_07380 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:lto00780]
D RGQ30_26460 hypothetical protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RGQ30_01890 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D RGQ30_15340 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGQ30_09120 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGQ30_15320 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGQ30_15980 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGQ30_13590 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGQ30_26450 alpha/beta hydrolase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D RGQ30_26440 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RGQ30_26480 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RGQ30_26470 hypothetical protein K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D RGQ30_26490 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D RGQ30_28670 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:lto00785]
D RGQ30_29560 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D RGQ30_29550 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_13470 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D RGQ30_13480 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D RGQ30_18660 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D RGQ30_18650 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:lto00790]
D RGQ30_08780 folE2_1; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D RGQ30_24170 folE2_2; GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D RGQ30_00410 phoD; alkaline phosphatase PhoD K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RGQ30_17460 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RGQ30_21660 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RGQ30_27360 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D RGQ30_28620 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D RGQ30_07420 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D RGQ30_23760 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D RGQ30_13540 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RGQ30_14610 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D RGQ30_07650 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D RGQ30_06810 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RGQ30_25850 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RGQ30_06570 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RGQ30_25860 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RGQ30_19090 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RGQ30_16180 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RGQ30_15050 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RGQ30_07760 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RGQ30_13340 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RGQ30_16530 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RGQ30_13320 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RGQ30_15020 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D RGQ30_15030 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:lto00670]
D RGQ30_13540 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D RGQ30_13440 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D RGQ30_06890 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D RGQ30_09010 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D RGQ30_07130 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGQ30_00540 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RGQ30_30640 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D RGQ30_13550 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D RGQ30_26920 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D RGQ30_07900 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D RGQ30_07890 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:lto00860]
D RGQ30_11760 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGQ30_03800 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D RGQ30_17120 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RGQ30_25990 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RGQ30_27990 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RGQ30_16440 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D RGQ30_31670 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D RGQ30_26240 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D RGQ30_29590 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D RGQ30_08590 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D RGQ30_19170 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D RGQ30_16430 hemDX; fused uroporphyrinogen-III synthase HemD/membrane protein HemX K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D RGQ30_06280 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D RGQ30_02010 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RGQ30_02000 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGQ30_06260 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D RGQ30_26170 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGQ30_06550 CobD/CbiB family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D RGQ30_12220 cobD; threonine-phosphate decarboxylase CobD K02225 cobC1; cobalamin biosynthesis protein CobC
D RGQ30_23110 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lto00130]
D RGQ30_05490 hypothetical protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D RGQ30_08530 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RGQ30_06760 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D RGQ30_03760 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RGQ30_04430 UbiH/UbiF family hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D RGQ30_08280 bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D RGQ30_06530 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D RGQ30_23990 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D RGQ30_07610 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RGQ30_21380 hypothetical protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D RGQ30_17090 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D RGQ30_25730 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RGQ30_20580 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RGQ30_26620 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D RGQ30_19720 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lto00900]
D RGQ30_08770 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D RGQ30_16030 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D RGQ30_18450 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D RGQ30_03210 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D RGQ30_18440 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D RGQ30_14390 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D RGQ30_09080 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_22460 hypothetical protein K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D RGQ30_03760 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RGQ30_08760 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RGQ30_04960 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RGQ30_16060 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGQ30_06580 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:lto00906]
D RGQ30_18350 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:lto00903]
D RGQ30_05290 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D RGQ30_22080 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:lto00907]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_20790 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183]
D RGQ30_30270 SDR family oxidoreductase K13774 atuB; citronellol/citronellal dehydrogenase
D RGQ30_11630 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase
D RGQ30_30290 atuD; citronellyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D RGQ30_30300 acetyl-CoA carboxylase biotin carboxylase subunit K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D RGQ30_30280 acyl-CoA carboxylase subunit beta K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D RGQ30_01590 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D RGQ30_27230 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_22050 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D RGQ30_02400 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGQ30_02410 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D RGQ30_07240 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:lto00523]
D RGQ30_02950 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGQ30_03000 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGQ30_02960 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGQ30_03020 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:lto01055]
D RGQ30_23430 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RGQ30_03000 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D RGQ30_04360 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:lto00332]
D RGQ30_05000 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D RGQ30_08600 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:lto00261]
D RGQ30_23430 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D RGQ30_02620 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D RGQ30_06290 GTP-binding protein K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D RGQ30_02610 hypothetical protein K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGQ30_06300 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D RGQ30_14650 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D RGQ30_14540 asd_1; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D RGQ30_12700 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D RGQ30_19230 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lto00521]
D RGQ30_25880 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D RGQ30_12790 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D RGQ30_02950 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGQ30_03000 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D RGQ30_02960 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D RGQ30_03020 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:lto00525]
D RGQ30_02950 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D RGQ30_03000 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:lto00401]
D RGQ30_08350 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGQ30_03570 hisC_1; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_08340 hisC_2; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D RGQ30_04500 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGQ30_04520 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D RGQ30_15310 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGQ30_09120 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGQ30_15320 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGQ30_13590 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D RGQ30_15330 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D RGQ30_21280 hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:lto00999]
D RGQ30_07930 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D RGQ30_05520 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lto00362]
D RGQ30_27230 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_22050 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_16970 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D RGQ30_11330 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D RGQ30_27240 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:lto00627]
D RGQ30_01500 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-]
D RGQ30_05300 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-]
D RGQ30_14800 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_18900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_11490 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D RGQ30_03760 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13370 glnA; type I glutamate--ammonia ligase K20712 glnA; 3-(hydroxyamino)phenol mutase [EC:5.4.4.3]
C 00364 Fluorobenzoate degradation [PATH:lto00364]
D RGQ30_08710 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGQ30_17010 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGQ30_20560 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:lto00625]
D RGQ30_08190 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D RGQ30_09200 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D RGQ30_23340 exaA; quinoprotein ethanol dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:lto00361]
D RGQ30_08710 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGQ30_17010 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGQ30_20560 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:lto00623]
D RGQ30_08710 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGQ30_17010 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D RGQ30_20560 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:lto00633]
D RGQ30_08230 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D RGQ30_27230 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D RGQ30_22050 acetyl-CoA C-acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:lto00643]
D RGQ30_14800 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_18900 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D RGQ30_11490 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
D RGQ30_17350 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D RGQ30_17360 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D RGQ30_17370 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:lto00930]
D RGQ30_22150 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D RGQ30_05290 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D RGQ30_22080 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D RGQ30_04600 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_13930 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D RGQ30_03970 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:lto00626]
D RGQ30_08190 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lto03020]
D RGQ30_28380 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGQ30_28370 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGQ30_28060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGQ30_10820 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lto03010]
D RGQ30_08380 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RGQ30_16100 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RGQ30_28250 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RGQ30_28070 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RGQ30_28140 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RGQ30_13140 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RGQ30_28350 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RGQ30_28170 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RGQ30_07580 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RGQ30_28320 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RGQ30_28080 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RGQ30_28360 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RGQ30_28090 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RGQ30_28180 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RGQ30_12340 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RGQ30_08450 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RGQ30_28220 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RGQ30_13160 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RGQ30_28270 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RGQ30_08800 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RGQ30_05840 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RGQ30_28410 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RGQ30_28280 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RGQ30_28310 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RGQ30_28300 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RGQ30_28190 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RGQ30_28160 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RGQ30_28390 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RGQ30_13170 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RGQ30_28400 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RGQ30_28420 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RGQ30_07590 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RGQ30_28210 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RGQ30_28120 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RGQ30_28240 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RGQ30_28050 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RGQ30_28150 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RGQ30_08480 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RGQ30_13740 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RGQ30_04970 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RGQ30_28260 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RGQ30_28290 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RGQ30_28200 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RGQ30_03190 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D RGQ30_04980 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RGQ30_09050 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RGQ30_28230 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RGQ30_28130 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RGQ30_06620 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RGQ30_15280 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RGQ30_09040 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RGQ30_13730 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lto00970]
D RGQ30_t00180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGQ30_t00190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGQ30_t00150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGQ30_t00220 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGQ30_t00260 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RGQ30_t00280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGQ30_t00290 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGQ30_t00070 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGQ30_t00060 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGQ30_t00300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGQ30_t00390 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D RGQ30_11760 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGQ30_28760 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGQ30_28750 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RGQ30_28770 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RGQ30_26190 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGQ30_06130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGQ30_27370 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGQ30_07210 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGQ30_07200 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGQ30_13710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGQ30_16290 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGQ30_12860 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGQ30_19100 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGQ30_00540 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D RGQ30_06190 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGQ30_08630 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGQ30_08990 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGQ30_11210 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGQ30_24050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGQ30_05050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGQ30_14400 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGQ30_13750 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGQ30_13760 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGQ30_06910 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGQ30_12680 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lto03060]
D RGQ30_28110 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RGQ30_28440 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGQ30_12380 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGQ30_26840 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RGQ30_26830 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RGQ30_26850 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RGQ30_31920 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGQ30_04870 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGQ30_01850 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RGQ30_05070 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGQ30_03050 hypothetical protein K03110 ftsY; fused signal recognition particle receptor
D RGQ30_03650 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGQ30_03660 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGQ30_03670 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D RGQ30_15400 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGQ30_08980 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lto04122]
D RGQ30_11380 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGQ30_06150 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RGQ30_26790 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RGQ30_13340 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D RGQ30_15050 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D RGQ30_09350 hypothetical protein K03636 moaD; sulfur-carrier protein
D RGQ30_13330 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D RGQ30_01790 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D RGQ30_07760 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D RGQ30_16530 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D RGQ30_26050 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:lto03018]
D RGQ30_05040 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RGQ30_15200 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGQ30_12600 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGQ30_12350 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RGQ30_26660 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGQ30_19610 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGQ30_24550 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RGQ30_19150 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGQ30_06630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGQ30_19700 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RGQ30_11050 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGQ30_07430 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lto03030]
D RGQ30_00280 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_11860 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_12900 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_14880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_26560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGQ30_24510 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGQ30_15590 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGQ30_08610 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGQ30_06220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGQ30_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGQ30_13180 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RGQ30_05860 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D RGQ30_27750 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGQ30_11850 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RGQ30_15950 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RGQ30_08700 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGQ30_16150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lto03410]
D RGQ30_19460 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGQ30_03250 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RGQ30_03240 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RGQ30_12870 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGQ30_00770 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D RGQ30_18200 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGQ30_18410 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGQ30_28740 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGQ30_13420 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGQ30_08700 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGQ30_11190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGQ30_16150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lto03420]
D RGQ30_18460 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RGQ30_27770 uvrA_2; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RGQ30_05640 uvrA_1; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RGQ30_11410 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RGQ30_18190 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RGQ30_08660 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGQ30_08700 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGQ30_16150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lto03430]
D RGQ30_12780 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RGQ30_07510 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RGQ30_08660 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGQ30_08880 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RGQ30_08750 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RGQ30_11190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGQ30_27750 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGQ30_26560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGQ30_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGQ30_24510 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGQ30_08610 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGQ30_15590 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGQ30_00280 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_11860 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_12900 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_14880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_06220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGQ30_16150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:lto03440]
D RGQ30_11190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGQ30_27750 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGQ30_15430 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RGQ30_24490 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RGQ30_07710 recA; recombinase RecA K03553 recA; recombination protein RecA
D RGQ30_08700 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGQ30_07110 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RGQ30_07100 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RGQ30_07120 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RGQ30_08490 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGQ30_26560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGQ30_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGQ30_24510 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGQ30_08610 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGQ30_15590 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGQ30_00280 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_11860 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_12900 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_14880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_06220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGQ30_31660 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RGQ30_13150 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lto02010]
D RGQ30_25040 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RGQ30_25070 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RGQ30_24730 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RGQ30_24720 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RGQ30_24710 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RGQ30_09700 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D RGQ30_09680 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D RGQ30_09690 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RGQ30_18020 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGQ30_25680 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGQ30_18030 ntrB_1; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RGQ30_25670 ntrB_2; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RGQ30_18040 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGQ30_25660 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGQ30_24770 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGQ30_24800 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGQ30_24760 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RGQ30_24820 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D RGQ30_24750 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGQ30_24830 ssuB; aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGQ30_22530 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RGQ30_23190 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RGQ30_23180 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RGQ30_22990 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RGQ30_18980 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RGQ30_18990 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RGQ30_03490 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RGQ30_03470 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RGQ30_03460 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RGQ30_03500 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RGQ30_03450 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RGQ30_29240 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RGQ30_29270 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D RGQ30_29260 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RGQ30_29250 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RGQ30_22580 hypothetical protein K02044 phnD; phosphonate transport system substrate-binding protein
D RGQ30_25530 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RGQ30_22570 hypothetical protein K02042 phnE; phosphonate transport system permease protein
D RGQ30_25550 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D RGQ30_25560 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RGQ30_22560 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGQ30_25540 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGQ30_26320 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGQ30_27060 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGQ30_27040 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D RGQ30_27050 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D RGQ30_27030 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RGQ30_31440 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RGQ30_31430 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D RGQ30_31420 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D RGQ30_15770 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGQ30_19320 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGQ30_15760 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGQ30_19330 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGQ30_15750 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGQ30_19340 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGQ30_15790 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGQ30_19350 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGQ30_15780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGQ30_19360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGQ30_17430 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D RGQ30_17420 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D RGQ30_17410 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D RGQ30_17400 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RGQ30_17390 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D RGQ30_24890 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RGQ30_24860 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D RGQ30_24870 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D RGQ30_24880 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D RGQ30_05920 hypothetical protein K10094 cbiK; nickel transport protein
D RGQ30_28030 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D RGQ30_28040 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RGQ30_11170 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D RGQ30_11160 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RGQ30_12020 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C
D RGQ30_06240 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D RGQ30_06250 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RGQ30_03310 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RGQ30_03030 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RGQ30_03040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGQ30_26550 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RGQ30_27090 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RGQ30_15010 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGQ30_19040 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGQ30_02520 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RGQ30_23500 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:lto02060]
D RGQ30_29770 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RGQ30_29780 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGQ30_29790 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGQ30_03280 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:lto03070]
D RGQ30_26990 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RGQ30_21310 opmH; efflux transporter outer membrane subunit OpmH K12340 tolC; outer membrane protein
D RGQ30_30390 bscC; SctC family type III secretion system outer membrane ring subunit BscC K03219 yscC; type III secretion protein C
D RGQ30_30360 hypothetical protein K03222 yscJ; type III secretion protein J
D RGQ30_30570 sctR; type III secretion system export apparatus subunit SctR K03226 yscR; type III secretion protein R
D RGQ30_30560 fliQ_2; flagellar biosynthesis protein FliQ K03227 yscS; type III secretion protein S
D RGQ30_30550 hypothetical protein K03228 yscT; type III secretion protein T
D RGQ30_30540 yscU; type III secretion system export apparatus switch protein YscU K03229 yscU; type III secretion protein U
D RGQ30_30620 sctV; type III secretion system export apparatus subunit SctV K03230 yscV; type III secretion protein V
D RGQ30_30600 hrcN; type III secretion system ATPase HrcN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D RGQ30_01650 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D RGQ30_03440 hypothetical protein K02453 gspD; general secretion pathway protein D
D RGQ30_01740 hypothetical protein K02452 gspC; general secretion pathway protein C
D RGQ30_01630 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D RGQ30_01730 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D RGQ30_01720 hypothetical protein K02457 gspH; general secretion pathway protein H
D RGQ30_01710 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D RGQ30_01700 hypothetical protein K02459 gspJ; general secretion pathway protein J
D RGQ30_01690 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D RGQ30_01680 hypothetical protein K02461 gspL; general secretion pathway protein L
D RGQ30_01670 hypothetical protein K02462 gspM; general secretion pathway protein M
D RGQ30_01640 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGQ30_03430 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGQ30_04200 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGQ30_26840 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RGQ30_26830 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RGQ30_28440 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGQ30_12380 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGQ30_28110 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RGQ30_26850 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RGQ30_31920 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGQ30_04870 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGQ30_03050 hypothetical protein K03110 ftsY; fused signal recognition particle receptor
D RGQ30_01850 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RGQ30_05070 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGQ30_03650 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGQ30_03660 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGQ30_03670 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D RGQ30_29460 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGQ30_01250 hcp_1; type VI secretion system receptor/chaperone Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D RGQ30_01260 hcp_2; type VI secretion system receptor/chaperone Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D RGQ30_29500 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D RGQ30_29490 DotU family type VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D RGQ30_01300 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lto02020]
D RGQ30_24020 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGQ30_24010 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RGQ30_00410 phoD; alkaline phosphatase PhoD K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RGQ30_17460 hypothetical protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RGQ30_21660 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D RGQ30_29240 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RGQ30_15380 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RGQ30_00930 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RGQ30_00920 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RGQ30_20950 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGQ30_10390 hypothetical protein K02403 flhD; flagellar transcriptional activator FlhD
D RGQ30_14780 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RGQ30_10400 flhC_1; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGQ30_14770 flhC_2; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGQ30_09670 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10350 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10360 flagellin K02406 fliC; flagellin
D RGQ30_10370 flagellin FliC K02406 fliC; flagellin
D RGQ30_10380 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10530 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RGQ30_10410 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RGQ30_13810 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGQ30_13820 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGQ30_27140 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RGQ30_27150 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RGQ30_27160 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RGQ30_02000 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGQ30_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGQ30_18770 aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D RGQ30_09410 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_23310 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_02120 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_10720 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_05990 hypothetical protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RGQ30_31390 hypothetical protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RGQ30_02130 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGQ30_10710 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGQ30_24320 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RGQ30_24340 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D RGQ30_24350 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D RGQ30_24360 fimbrial protein K02282 cpaE; pilus assembly protein CpaE
D RGQ30_24370 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGQ30_24380 hypothetical protein K12510 tadB; tight adherence protein B
D RGQ30_24390 hypothetical protein K12511 tadC; tight adherence protein C
D RGQ30_24400 hypothetical protein K27079 tadD; tight adherence protein D
D RGQ30_22230 hypothetical protein K27080 tadG; tight adherence protein G
D RGQ30_22720 hypothetical protein K27080 tadG; tight adherence protein G
D RGQ30_16120 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D RGQ30_13390 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGQ30_13400 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RGQ30_00570 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGQ30_00580 esaR; response regulator transcription factor EsaR K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RGQ30_22010 sigma-54 dependent transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_03300 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RGQ30_07750 pilin K02650 pilA; type IV pilus assembly protein PilA
D RGQ30_10730 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGQ30_25350 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGQ30_12090 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGQ30_00430 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_02260 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_06020 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_06200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_09960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_10000 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_10470 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_13410 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_13800 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_20670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_24640 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_24660 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_25390 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_15630 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RGQ30_10010 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_24650 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_25380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_09990 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_10460 cheAY2; chemotaxis histidine kinase/response regulator CheAY2 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_25330 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_09970 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10120 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10440 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_25310 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_25340 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10750 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_15800 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_25370 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_08150 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RGQ30_10430 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RGQ30_06670 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RGQ30_06680 fixJ; oxygen response regulator transcription factor FixJ K11712 dctR; two-component system, LuxR family, response regulator DctR
D RGQ30_06660 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D RGQ30_27030 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RGQ30_27040 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D RGQ30_27050 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D RGQ30_26320 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGQ30_27060 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGQ30_29920 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGQ30_02510 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGQ30_01060 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGQ30_14020 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGQ30_01070 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D RGQ30_14030 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D RGQ30_03700 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D RGQ30_03710 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGQ30_03720 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D RGQ30_19300 nirM; cytochrome C-551 K08738 CYC; cytochrome c
D RGQ30_29660 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D RGQ30_29650 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D RGQ30_29640 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D RGQ30_29630 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D RGQ30_26990 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RGQ30_21310 opmH; efflux transporter outer membrane subunit OpmH K12340 tolC; outer membrane protein
D RGQ30_27500 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D RGQ30_02790 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D RGQ30_02810 protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RGQ30_11400 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D RGQ30_02800 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RGQ30_00470 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGQ30_05940 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGQ30_10580 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D RGQ30_03700 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lto02024]
D RGQ30_19700 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RGQ30_04500 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D RGQ30_04520 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D RGQ30_05580 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D RGQ30_20950 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGQ30_10390 hypothetical protein K02403 flhD; flagellar transcriptional activator FlhD
D RGQ30_14780 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RGQ30_10400 flhC_1; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGQ30_14770 flhC_2; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGQ30_13820 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGQ30_15770 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGQ30_19320 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGQ30_15760 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGQ30_19330 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGQ30_15750 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGQ30_19340 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGQ30_15790 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGQ30_19350 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGQ30_15780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGQ30_19360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGQ30_04110 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_13130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_16250 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_22040 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_29920 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGQ30_02510 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGQ30_06870 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D RGQ30_30100 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_21470 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_23490 ompQ; pyoverdine export/recycling transporter outer membrane subunit OmpQ K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_11780 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGQ30_11790 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGQ30_11800 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGQ30_11810 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGQ30_31920 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGQ30_02300 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_07260 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_15640 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_28440 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGQ30_12380 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGQ30_28110 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RGQ30_26850 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RGQ30_04870 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGQ30_03050 hypothetical protein K03110 ftsY; fused signal recognition particle receptor
D RGQ30_01850 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RGQ30_05070 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:lto02030]
D RGQ30_00430 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_02260 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_06020 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_06200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_09960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_10000 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_10470 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_13410 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_13800 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_20670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_24640 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_24660 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_25390 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_15630 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RGQ30_09990 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_10460 cheAY2; chemotaxis histidine kinase/response regulator CheAY2 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_25330 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_10010 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_24650 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_25380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_09970 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10120 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10440 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_25310 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_25340 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10450 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RGQ30_10750 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_15800 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_25370 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_12090 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGQ30_08150 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RGQ30_10430 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RGQ30_10740 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RGQ30_10730 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGQ30_25350 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGQ30_10240 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RGQ30_10180 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RGQ30_10170 hypothetical protein K02417 fliN; flagellar motor switch protein FliN
D RGQ30_10410 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RGQ30_10420 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:lto02040]
D RGQ30_10260 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE
D RGQ30_10250 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGQ30_10240 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RGQ30_10220 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGQ30_10210 hypothetical protein K02413 fliJ; flagellar protein FliJ
D RGQ30_10190 hypothetical protein K02415 fliL; flagellar protein FliL
D RGQ30_10180 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RGQ30_10170 hypothetical protein K02417 fliN; flagellar motor switch protein FliN
D RGQ30_10160 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RGQ30_10150 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGQ30_10140 fliQ_1; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGQ30_10130 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGQ30_10500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGQ30_10490 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGQ30_10590 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RGQ30_10600 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RGQ30_10610 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RGQ30_10620 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RGQ30_10630 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RGQ30_10640 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RGQ30_10650 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RGQ30_10660 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RGQ30_10670 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RGQ30_10690 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RGQ30_10700 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RGQ30_09670 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10350 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10360 flagellin K02406 fliC; flagellin
D RGQ30_10370 flagellin FliC K02406 fliC; flagellin
D RGQ30_10380 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10330 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D RGQ30_10320 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RGQ30_10310 flagellar protein FliT K02423 fliT; flagellar protein FliT
D RGQ30_10410 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RGQ30_10420 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RGQ30_05940 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGQ30_10580 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGQ30_10570 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D RGQ30_05870 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RGQ30_31160 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D RGQ30_10390 hypothetical protein K02403 flhD; flagellar transcriptional activator FlhD
D RGQ30_14780 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RGQ30_10400 flhC_1; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGQ30_14770 flhC_2; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGQ30_03300 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RGQ30_10530 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D RGQ30_12600 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:lto04980]
D RGQ30_26170 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D RGQ30_30640 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lto01501]
D RGQ30_28460 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RGQ30_15460 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D RGQ30_30120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_22800 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_30110 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RGQ30_22810 acrB; efflux RND transporter permease AcrB K18138 acrB; multidrug efflux pump
D RGQ30_30100 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_21470 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_23490 ompQ; pyoverdine export/recycling transporter outer membrane subunit OmpQ K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_26990 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RGQ30_21310 opmH; efflux transporter outer membrane subunit OpmH K12340 tolC; outer membrane protein
D RGQ30_27920 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGQ30_28810 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGQ30_04710 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:lto01502]
D RGQ30_04790 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGQ30_18390 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGQ30_04730 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D RGQ30_04740 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGQ30_04770 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lto01503]
D RGQ30_21030 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGQ30_07500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGQ30_15380 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RGQ30_28580 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RGQ30_30120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_22800 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_30110 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RGQ30_22810 acrB; efflux RND transporter permease AcrB K18138 acrB; multidrug efflux pump
D RGQ30_26990 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RGQ30_21310 opmH; efflux transporter outer membrane subunit OpmH K12340 tolC; outer membrane protein
D RGQ30_15970 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lto01000]
C 01001 Protein kinases [BR:lto01001]
D RGQ30_02800 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RGQ30_27520 epsG; chain length determinant protein tyrosine kinase EpsG K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGQ30_24020 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGQ30_00930 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RGQ30_20950 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGQ30_13810 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGQ30_30160 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RGQ30_21060 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RGQ30_09410 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_23310 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_02120 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_10720 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_05990 hypothetical protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RGQ30_31390 hypothetical protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RGQ30_13390 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGQ30_00570 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGQ30_13300 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RGQ30_25290 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RGQ30_09990 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_10460 cheAY2; chemotaxis histidine kinase/response regulator CheAY2 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_25330 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_06670 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RGQ30_01060 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGQ30_14020 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGQ30_00470 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGQ30_24420 hypothetical protein K02486 K02486; two-component system, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lto01009]
D RGQ30_07920 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGQ30_19560 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RGQ30_29400 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D RGQ30_18480 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:lto01002]
D RGQ30_08980 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D RGQ30_04930 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGQ30_15810 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D RGQ30_23220 hypothetical protein K07010 K07010; putative glutamine amidotransferase
D RGQ30_29340 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D RGQ30_17540 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D RGQ30_14640 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D RGQ30_27820 glutamate synthase-related protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D RGQ30_28500 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D RGQ30_07790 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D RGQ30_13430 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D RGQ30_03060 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RGQ30_03070 pitrilysin family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D RGQ30_06230 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D RGQ30_16110 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D RGQ30_06520 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D RGQ30_23770 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGQ30_06580 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RGQ30_29330 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D RGQ30_12140 M48 family metallopeptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D RGQ30_07770 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D RGQ30_16020 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D RGQ30_15380 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RGQ30_03680 Do family serine endopeptidase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D RGQ30_02300 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_07260 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_15640 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_28710 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGQ30_16740 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RGQ30_06720 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RGQ30_18330 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D RGQ30_18310 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D RGQ30_14290 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RGQ30_15400 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D RGQ30_16860 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D RGQ30_01800 cptA; protease CptA K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D RGQ30_04360 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D RGQ30_15240 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D RGQ30_15730 ldcA; muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RGQ30_28560 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D RGQ30_29280 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase
D RGQ30_16510 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D RGQ30_05570 tldD; metalloprotease TldD K03568 tldD; TldD protein
D RGQ30_19670 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D RGQ30_19680 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:lto01003]
D RGQ30_13600 glycosyltransferase family 1 protein K27597 K27597; 1,2-diacylglycerol 3-alpha-glucosyltransferase/glucuronosyltransferase [EC:2.4.1.337 2.4.1.-]
D RGQ30_28960 bcsA_2; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D RGQ30_22410 bcsA_1; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D RGQ30_05530 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGQ30_27920 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGQ30_20600 glucoamylase family protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lto01005]
D RGQ30_15970 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D RGQ30_15960 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D RGQ30_04840 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D RGQ30_15990 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D RGQ30_12820 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D RGQ30_08850 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D RGQ30_07940 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGQ30_07950 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D RGQ30_27000 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D RGQ30_21030 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D RGQ30_12590 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D RGQ30_08830 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D RGQ30_03340 HAD-IIIA family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D RGQ30_03350 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D RGQ30_08420 hldA; ADP-heptose synthase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D RGQ30_24270 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D RGQ30_27010 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D RGQ30_26930 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D RGQ30_26540 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D RGQ30_01370 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D RGQ30_07190 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D RGQ30_08430 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D RGQ30_02360 glycosyltransferase family 4 protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lto01011]
D RGQ30_03540 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D RGQ30_07820 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D RGQ30_04780 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D RGQ30_04750 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D RGQ30_04720 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D RGQ30_04790 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D RGQ30_18390 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D RGQ30_06450 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D RGQ30_15730 ldcA; muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D RGQ30_04740 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D RGQ30_04770 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D RGQ30_30770 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D RGQ30_08810 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RGQ30_27920 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D RGQ30_28810 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D RGQ30_04710 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGQ30_28710 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D RGQ30_06720 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D RGQ30_16740 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D RGQ30_05530 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D RGQ30_29340 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D RGQ30_17540 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D RGQ30_07880 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RGQ30_04450 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D RGQ30_23930 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D RGQ30_11820 hypothetical protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D RGQ30_15570 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D RGQ30_28570 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D RGQ30_07500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGQ30_05100 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:lto01004]
D RGQ30_15310 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D RGQ30_15300 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D RGQ30_15340 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D RGQ30_09120 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGQ30_15320 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D RGQ30_15980 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D RGQ30_13590 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D RGQ30_22200 nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D RGQ30_18270 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D RGQ30_27120 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D RGQ30_09030 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RGQ30_21370 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D RGQ30_05960 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D RGQ30_22480 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D RGQ30_22950 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D RGQ30_22980 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D RGQ30_04110 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_13130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_16250 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_22040 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_12940 fadD6; long-chain-acyl-CoA synthetase FadD6 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D RGQ30_15290 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D RGQ30_05690 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D RGQ30_07180 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D RGQ30_25900 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lto01008]
D RGQ30_23430 alpha-hydroxy acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:lto01006]
D RGQ30_08760 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D RGQ30_04960 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D RGQ30_16060 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D RGQ30_18350 hypothetical protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D RGQ30_07520 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RGQ30_08530 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D RGQ30_02010 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:lto01007]
D RGQ30_11760 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGQ30_26190 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGQ30_26650 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RGQ30_06910 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGQ30_12680 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RGQ30_12860 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGQ30_24050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGQ30_19100 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGQ30_08990 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGQ30_06190 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGQ30_08630 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGQ30_11210 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGQ30_27370 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGQ30_14400 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGQ30_07210 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGQ30_07200 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGQ30_16290 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGQ30_05050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGQ30_13710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGQ30_06130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGQ30_13750 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGQ30_13760 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGQ30_11420 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D RGQ30_13260 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D RGQ30_16190 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D RGQ30_03570 hisC_1; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_08340 hisC_2; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D RGQ30_26440 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D RGQ30_07860 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D RGQ30_10070 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D RGQ30_26480 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D RGQ30_17120 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RGQ30_25990 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D RGQ30_26950 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D RGQ30_06810 pabB; aminodeoxychorismate synthase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D RGQ30_08320 serC; 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lto00194]
D RGQ30_31720 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D RGQ30_31730 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D RGQ30_31740 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D RGQ30_31750 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D RGQ30_31760 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D RGQ30_31770 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D RGQ30_31780 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D RGQ30_31790 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGQ30_31800 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lto03000]
D RGQ30_31200 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGQ30_08080 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RGQ30_17200 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D RGQ30_29310 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RGQ30_31560 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D RGQ30_01130 oxyR; LysR family transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RGQ30_08520 LysR substrate-binding domain-containing protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D RGQ30_06350 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D RGQ30_24700 CysB family HTH-type transcriptional regulator K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D RGQ30_31370 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D RGQ30_27080 LysR substrate-binding domain-containing protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D RGQ30_17160 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D RGQ30_27130 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RGQ30_18750 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D RGQ30_30130 bpeR; TetR family transcriptional regulator BpeR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D RGQ30_20710 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D RGQ30_21480 mexL; efflux system transcriptional repressor MexL K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D RGQ30_06960 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D RGQ30_30230 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D RGQ30_22350 DUF1956 domain-containing protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D RGQ30_03170 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGQ30_23250 ohrR; hydroperoxide stress response transcriptional regulator OhrR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D RGQ30_22860 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RGQ30_24150 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D RGQ30_19210 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D RGQ30_29920 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGQ30_02510 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D RGQ30_29600 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D RGQ30_11390 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D RGQ30_29190 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D RGQ30_23170 hexR; DNA-binding transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D RGQ30_28670 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D RGQ30_07140 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RGQ30_18840 prpR; propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D RGQ30_02240 hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RGQ30_09290 hypothetical protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D RGQ30_15480 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D RGQ30_31810 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGQ30_02970 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D RGQ30_19180 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D RGQ30_29170 PaaX family transcriptional regulator C-terminal domain-containing protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RGQ30_17590 PaaX family transcriptional regulator C-terminal domain-containing protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D RGQ30_25930 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D RGQ30_24070 FMN-binding negative transcriptional regulator K07734 paiB; transcriptional regulator
D RGQ30_25950 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D RGQ30_01400 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RGQ30_06880 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D RGQ30_04680 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lto03021]
D RGQ30_28060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGQ30_28380 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGQ30_28370 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGQ30_10820 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RGQ30_05870 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D RGQ30_31160 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor
D RGQ30_29950 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGQ30_12260 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGQ30_15350 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGQ30_19060 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D RGQ30_02060 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D RGQ30_03300 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D RGQ30_10530 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RGQ30_19800 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RGQ30_07670 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RGQ30_28430 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RGQ30_03730 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D RGQ30_03740 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D RGQ30_28890 hypothetical protein K04749 rsbV; anti-sigma B factor antagonist
D RGQ30_15360 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D RGQ30_15370 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D RGQ30_01400 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RGQ30_23810 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D RGQ30_10770 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D RGQ30_24550 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:lto03019]
D RGQ30_15200 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGQ30_26430 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RGQ30_15410 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGQ30_19610 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGQ30_06590 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RGQ30_26660 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D RGQ30_12600 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGQ30_12350 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D RGQ30_24550 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D RGQ30_19150 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGQ30_06630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGQ30_19700 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RGQ30_11050 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D RGQ30_07430 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D RGQ30_05040 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D RGQ30_10960 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D RGQ30_03260 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D RGQ30_16790 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:lto03011]
D RGQ30_08380 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D RGQ30_16100 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D RGQ30_28250 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D RGQ30_28070 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D RGQ30_28140 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D RGQ30_13140 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D RGQ30_28350 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D RGQ30_28170 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D RGQ30_07580 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D RGQ30_28320 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D RGQ30_28080 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D RGQ30_28360 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D RGQ30_28090 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D RGQ30_28180 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D RGQ30_12340 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D RGQ30_08450 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D RGQ30_28220 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D RGQ30_13160 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D RGQ30_28270 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D RGQ30_08800 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D RGQ30_05840 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D RGQ30_28410 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D RGQ30_28280 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D RGQ30_28310 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D RGQ30_28300 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D RGQ30_28190 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D RGQ30_28160 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D RGQ30_13170 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D RGQ30_28400 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D RGQ30_28420 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D RGQ30_28390 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D RGQ30_07590 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D RGQ30_28210 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D RGQ30_28120 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D RGQ30_28240 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D RGQ30_28050 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D RGQ30_28150 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D RGQ30_08480 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D RGQ30_13740 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D RGQ30_04970 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D RGQ30_28260 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D RGQ30_28290 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D RGQ30_28200 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D RGQ30_04980 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D RGQ30_09050 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D RGQ30_28230 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D RGQ30_28130 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D RGQ30_06620 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D RGQ30_15280 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D RGQ30_09040 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D RGQ30_13730 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D RGQ30_03190 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
C 03009 Ribosome biogenesis [BR:lto03009]
D RGQ30_15410 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGQ30_06590 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RGQ30_15420 era; GTPase Era K03595 era; GTPase
D RGQ30_04990 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D RGQ30_01400 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D RGQ30_19800 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D RGQ30_07670 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D RGQ30_28430 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D RGQ30_08020 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D RGQ30_06460 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6)) -dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D RGQ30_00550 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RGQ30_09020 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D RGQ30_03080 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D RGQ30_07230 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D RGQ30_31830 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RGQ30_04690 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D RGQ30_01390 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RGQ30_15250 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D RGQ30_07910 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D RGQ30_19600 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D RGQ30_23780 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D RGQ30_18800 rlmF; 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D RGQ30_26410 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D RGQ30_08580 class I SAM-dependent RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D RGQ30_14370 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D RGQ30_14340 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D RGQ30_19820 hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D RGQ30_15210 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D RGQ30_18570 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D RGQ30_25820 hypothetical protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D RGQ30_18420 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D RGQ30_08460 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D RGQ30_18500 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D RGQ30_05420 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D RGQ30_16220 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D RGQ30_12750 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D RGQ30_15200 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D RGQ30_26430 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D RGQ30_25940 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D RGQ30_06560 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D RGQ30_14430 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D RGQ30_19690 hflX; GTPase HflX K03665 hflX; GTPase
D RGQ30_07340 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RGQ30_10780 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D RGQ30_19780 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D RGQ30_19810 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D RGQ30_21390 hypothetical protein K14761 rlbA; ribosome-associated protein
D RGQ30_26400 hypothetical protein K09710 ybeB; ribosome-associated protein
D RGQ30_25140 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D RGQ30_23790 hypothetical protein K07574 yhbY; RNA-binding protein
D RGQ30_16520 yjgA; ribosome biogenesis factor YjgA K09889 yjgA; ribosome-associated protein
D RGQ30_03290 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D RGQ30_03120 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D RGQ30_15270 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lto03016]
D RGQ30_17760 MBL fold metallo-hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RGQ30_24120 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D RGQ30_20160 RtcB family protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D RGQ30_11760 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGQ30_05050 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RGQ30_08990 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RGQ30_08630 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGQ30_19100 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RGQ30_26190 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D RGQ30_24050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGQ30_11210 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RGQ30_27370 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGQ30_06130 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RGQ30_13710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RGQ30_16290 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RGQ30_12860 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RGQ30_06190 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RGQ30_14400 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RGQ30_13750 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RGQ30_13760 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RGQ30_06910 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGQ30_12680 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RGQ30_03640 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RGQ30_26070 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RGQ30_14560 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RGQ30_19770 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RGQ30_11380 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGQ30_07340 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RGQ30_07520 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RGQ30_31910 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D RGQ30_31840 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RGQ30_02580 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D RGQ30_10870 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RGQ30_05500 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D RGQ30_12110 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D RGQ30_07210 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D RGQ30_07200 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D RGQ30_26650 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D RGQ30_15740 hypothetical protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D RGQ30_19750 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D RGQ30_07150 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D RGQ30_07620 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D RGQ30_12800 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D RGQ30_08470 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RGQ30_01870 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RGQ30_15940 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D RGQ30_26790 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RGQ30_28610 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D RGQ30_06150 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D RGQ30_11360 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D RGQ30_15560 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D RGQ30_00500 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D RGQ30_26700 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D RGQ30_19090 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D RGQ30_25850 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D RGQ30_25860 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D RGQ30_16180 queF; preQ(1) synthase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D RGQ30_07480 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D RGQ30_27300 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D RGQ30_24680 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D RGQ30_12890 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RGQ30_18430 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RGQ30_05780 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RGQ30_07490 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D RGQ30_26870 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D RGQ30_19610 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D RGQ30_12350 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:lto03012]
D RGQ30_19790 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RGQ30_13720 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RGQ30_16230 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D RGQ30_16090 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RGQ30_28330 tuf_1; elongation factor Tu K02358 tuf; elongation factor Tu
D RGQ30_28450 tuf_2; elongation factor Tu K02358 tuf; elongation factor Tu
D RGQ30_28340 fusA; elongation factor G K02355 fusA; elongation factor G
D RGQ30_03790 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D RGQ30_16070 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D RGQ30_03780 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D RGQ30_03140 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D RGQ30_28100 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D RGQ30_08010 efp; elongation factor P K02356 efp; elongation factor P
D RGQ30_11200 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D RGQ30_13010 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D RGQ30_18830 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:lto03110]
D RGQ30_08940 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D RGQ30_10920 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D RGQ30_18320 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D RGQ30_28550 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D RGQ30_19560 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RGQ30_19150 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGQ30_11340 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D RGQ30_09590 molecular chaperone HscC K04045 hscC; molecular chaperone HscC
D RGQ30_06630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGQ30_19140 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGQ30_11350 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D RGQ30_12620 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D RGQ30_19160 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RGQ30_14820 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D RGQ30_01340 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D RGQ30_06640 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D RGQ30_15380 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D RGQ30_23770 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D RGQ30_31790 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D RGQ30_01850 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RGQ30_30180 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D RGQ30_00370 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D RGQ30_02300 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_07260 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_15640 hypothetical protein K14645 K14645; serine protease [EC:3.4.21.-]
D RGQ30_12830 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D RGQ30_18280 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D RGQ30_21440 hypothetical protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RGQ30_25640 hypothetical protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D RGQ30_09070 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D RGQ30_12760 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D RGQ30_04240 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RGQ30_15470 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D RGQ30_06480 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D RGQ30_24540 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D RGQ30_01840 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D RGQ30_03770 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D RGQ30_28580 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D RGQ30_24450 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D RGQ30_04440 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RGQ30_28010 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D RGQ30_12060 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:lto04131]
D RGQ30_14360 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D RGQ30_20930 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RGQ30_07250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGQ30_01820 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGQ30_07290 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGQ30_19560 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:lto03051]
D RGQ30_19560 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:lto03032]
D RGQ30_11850 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D RGQ30_31200 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGQ30_30940 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGQ30_18300 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGQ30_13770 hypothetical protein K04764 ihfA; integration host factor subunit alpha
D RGQ30_08390 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RGQ30_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGQ30_13180 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D RGQ30_05860 hypothetical protein K02316 dnaG; DNA primase [EC:2.7.7.101]
D RGQ30_27750 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGQ30_26560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGQ30_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGQ30_06220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGQ30_08610 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGQ30_15590 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGQ30_00280 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_11860 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_12900 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_14880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_24510 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGQ30_15950 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RGQ30_08700 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGQ30_16150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGQ30_07450 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D RGQ30_08310 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGQ30_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGQ30_19590 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGQ30_14250 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGQ30_00510 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lto03036]
D RGQ30_31200 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGQ30_15410 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RGQ30_11740 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGQ30_30940 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGQ30_18300 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGQ30_13770 hypothetical protein K04764 ihfA; integration host factor subunit alpha
D RGQ30_08390 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RGQ30_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D RGQ30_29960 Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D RGQ30_07140 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RGQ30_19700 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D RGQ30_03170 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D RGQ30_16170 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D RGQ30_19130 ScpA family protein K05896 scpA; segregation and condensation protein A
D RGQ30_19830 hypothetical protein K06024 scpB; segregation and condensation protein B
D RGQ30_04810 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RGQ30_12610 hypothetical protein K05589 ftsB; cell division protein FtsB
D RGQ30_03040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGQ30_04710 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D RGQ30_16320 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D RGQ30_04700 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D RGQ30_04800 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D RGQ30_04760 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D RGQ30_03030 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RGQ30_04820 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGQ30_19250 cell division protein ZapA K09888 zapA; cell division protein ZapA
D RGQ30_04910 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD
D RGQ30_18630 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D RGQ30_07500 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D RGQ30_30120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_22800 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_10810 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RGQ30_10800 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RGQ30_10790 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RGQ30_28780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGQ30_28790 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D RGQ30_28800 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D RGQ30_28820 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D RGQ30_04350 ParA family protein K03496 parA; chromosome partitioning protein
D RGQ30_31820 ParA family protein K03496 parA; chromosome partitioning protein
D RGQ30_04370 ParA family protein K03496 parA; chromosome partitioning protein
D RGQ30_31810 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D RGQ30_19590 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGQ30_14250 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGQ30_31840 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D RGQ30_31830 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D RGQ30_07980 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D RGQ30_05700 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D RGQ30_16870 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RGQ30_27980 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:lto03400]
D RGQ30_04580 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RGQ30_30760 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RGQ30_15930 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RGQ30_25960 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D RGQ30_03250 hypothetical protein K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D RGQ30_19460 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D RGQ30_04900 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D RGQ30_08960 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D RGQ30_08080 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D RGQ30_24140 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D RGQ30_00770 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D RGQ30_18200 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGQ30_18410 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D RGQ30_12870 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D RGQ30_03240 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D RGQ30_28740 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGQ30_13420 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RGQ30_11190 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D RGQ30_16150 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D RGQ30_08700 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D RGQ30_27770 uvrA_2; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RGQ30_05640 uvrA_1; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D RGQ30_11410 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D RGQ30_18190 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D RGQ30_08660 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D RGQ30_28380 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D RGQ30_28370 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D RGQ30_28060 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D RGQ30_10820 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D RGQ30_18460 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D RGQ30_12780 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D RGQ30_07510 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D RGQ30_08880 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D RGQ30_08750 hypothetical protein K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D RGQ30_26560 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D RGQ30_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D RGQ30_06220 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D RGQ30_08610 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D RGQ30_15590 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D RGQ30_00280 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_11860 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_12900 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_14880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D RGQ30_24510 hypothetical protein K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D RGQ30_27750 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGQ30_07710 recA; recombinase RecA K03553 recA; recombination protein RecA
D RGQ30_07110 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D RGQ30_07100 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D RGQ30_07120 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D RGQ30_31660 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D RGQ30_13150 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D RGQ30_18380 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D RGQ30_08490 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D RGQ30_15430 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D RGQ30_24490 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D RGQ30_19200 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D RGQ30_21360 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D RGQ30_24520 UvrD-helicase domain-containing protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D RGQ30_10270 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D RGQ30_08310 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D RGQ30_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D RGQ30_30940 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGQ30_18300 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D RGQ30_07140 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D RGQ30_13770 hypothetical protein K04764 ihfA; integration host factor subunit alpha
D RGQ30_08390 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D RGQ30_11740 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D RGQ30_10860 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D RGQ30_14290 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D RGQ30_14280 imuA; translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA
D RGQ30_14270 DNA polymerase Y family protein K14161 imuB; protein ImuB
D RGQ30_14260 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D RGQ30_07720 hypothetical protein K03565 recX; regulatory protein
D RGQ30_31650 UvrD-helicase domain-containing protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D RGQ30_18590 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D RGQ30_27290 ligase-associated DNA damage response DEXH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D RGQ30_05110 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D RGQ30_05120 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:lto03029]
D RGQ30_03710 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D RGQ30_19790 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D RGQ30_13720 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D RGQ30_16090 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D RGQ30_28330 tuf_1; elongation factor Tu K02358 tuf; elongation factor Tu
D RGQ30_28450 tuf_2; elongation factor Tu K02358 tuf; elongation factor Tu
D RGQ30_28340 fusA; elongation factor G K02355 fusA; elongation factor G
D RGQ30_15420 era; GTPase Era K03595 era; GTPase
D RGQ30_06910 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RGQ30_08630 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RGQ30_27370 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RGQ30_24050 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RGQ30_28760 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D RGQ30_28750 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D RGQ30_28770 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D RGQ30_27750 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D RGQ30_16010 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D RGQ30_19150 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGQ30_19160 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D RGQ30_06630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGQ30_06640 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D RGQ30_19140 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D RGQ30_11380 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RGQ30_11350 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D RGQ30_03770 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D RGQ30_16870 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D RGQ30_02010 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D RGQ30_01940 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D RGQ30_02000 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D RGQ30_31920 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGQ30_01980 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D RGQ30_14010 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D RGQ30_02020 SCO family protein K07152 SCO1; protein SCO1
D RGQ30_19560 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lto02000]
D RGQ30_26550 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D RGQ30_24920 ABC transporter ATP-binding protein/permease K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D RGQ30_27090 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D RGQ30_13560 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGQ30_14740 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D RGQ30_15010 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGQ30_19040 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGQ30_02520 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RGQ30_23500 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D RGQ30_28840 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D RGQ30_25040 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D RGQ30_25070 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D RGQ30_24730 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D RGQ30_24720 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D RGQ30_24710 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D RGQ30_22530 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D RGQ30_23190 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D RGQ30_23180 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D RGQ30_09700 extracellular solute-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D RGQ30_09680 ABC transporter permease K05773 tupB; tungstate transport system permease protein
D RGQ30_09690 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D RGQ30_18020 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGQ30_25680 CmpA/NrtA family ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D RGQ30_18030 ntrB_1; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RGQ30_25670 ntrB_2; nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D RGQ30_18040 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGQ30_25660 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D RGQ30_24770 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGQ30_24800 sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D RGQ30_24760 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D RGQ30_24820 ssuC; aliphatic sulfonate ABC transporter permease SsuC K15554 ssuC; sulfonate transport system permease protein
D RGQ30_24750 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGQ30_24830 ssuB; aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D RGQ30_22990 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D RGQ30_18980 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D RGQ30_18990 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D RGQ30_03470 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D RGQ30_03460 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D RGQ30_03450 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D RGQ30_03490 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D RGQ30_03500 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D RGQ30_29240 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D RGQ30_29270 pstC; phosphate ABC transporter permease PstC K02037 pstC; phosphate transport system permease protein
D RGQ30_29260 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D RGQ30_29250 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D RGQ30_22580 hypothetical protein K02044 phnD; phosphonate transport system substrate-binding protein
D RGQ30_25530 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D RGQ30_22570 hypothetical protein K02042 phnE; phosphonate transport system permease protein
D RGQ30_25550 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D RGQ30_25560 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D RGQ30_22560 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGQ30_25540 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D RGQ30_26320 amino acid ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGQ30_27060 transporter substrate-binding domain-containing protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D RGQ30_27040 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D RGQ30_27050 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D RGQ30_27030 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D RGQ30_31440 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D RGQ30_31430 ABC transporter permease subunit K09970 aapQ; general L-amino acid transport system permease protein
D RGQ30_31420 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D RGQ30_15770 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGQ30_19320 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D RGQ30_15760 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGQ30_19330 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D RGQ30_15750 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGQ30_19340 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D RGQ30_15790 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGQ30_19350 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D RGQ30_15780 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGQ30_19360 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D RGQ30_17430 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D RGQ30_17420 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D RGQ30_17410 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D RGQ30_17400 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D RGQ30_17390 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D RGQ30_09310 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D RGQ30_11780 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D RGQ30_11790 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D RGQ30_11800 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D RGQ30_11810 dipeptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D RGQ30_24890 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D RGQ30_24860 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D RGQ30_24870 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D RGQ30_24880 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D RGQ30_26760 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D RGQ30_22840 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D RGQ30_22850 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D RGQ30_05920 hypothetical protein K10094 cbiK; nickel transport protein
D RGQ30_06240 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D RGQ30_06250 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D RGQ30_03310 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D RGQ30_28030 ABC transporter permease K09694 nodJ; lipooligosaccharide transport system permease protein
D RGQ30_28040 ATP-binding cassette domain-containing protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D RGQ30_11170 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D RGQ30_11160 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D RGQ30_12020 ccmC; heme ABC transporter permease CcmC K02195 ccmC; heme exporter protein C
D RGQ30_03030 permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D RGQ30_03040 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D RGQ30_03520 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGQ30_09220 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D RGQ30_03510 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGQ30_09230 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D RGQ30_09910 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGQ30_13580 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGQ30_14930 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D RGQ30_21210 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGQ30_21220 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D RGQ30_09900 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGQ30_18260 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGQ30_21230 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D RGQ30_06600 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D RGQ30_14480 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D RGQ30_18400 lplT; lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D RGQ30_28460 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D RGQ30_06390 Bcr/CflA family multidrug efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D RGQ30_29770 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D RGQ30_29780 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D RGQ30_29790 hypothetical protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D RGQ30_03280 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D RGQ30_29830 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D RGQ30_03910 ammonium transporter K03320 amt; ammonium transporter, Amt family
D RGQ30_26800 glutathione S-transferase N-terminal domain-containing protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGQ30_02050 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D RGQ30_03730 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D RGQ30_14350 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D RGQ30_26210 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D RGQ30_27780 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel
D RGQ30_06830 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D RGQ30_10410 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RGQ30_10420 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RGQ30_08870 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RGQ30_23130 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RGQ30_24980 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D RGQ30_08860 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RGQ30_23140 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RGQ30_24990 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D RGQ30_07070 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D RGQ30_07060 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D RGQ30_13350 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D RGQ30_09090 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGQ30_26150 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGQ30_20640 porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D RGQ30_08290 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D RGQ30_01470 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D RGQ30_09210 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D RGQ30_16590 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D RGQ30_17640 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D RGQ30_25980 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase
D RGQ30_22640 piuA; TonB-dependent siderophore receptor PiuA K16090 fiu; catecholate siderophore receptor
D RGQ30_23410 catecholate siderophore receptor Fiu K16090 fiu; catecholate siderophore receptor
D RGQ30_01080 TonB-dependent receptor family protein K16091 fecA; Fe(3+) dicitrate transport protein
D RGQ30_23710 TonB-dependent receptor family protein K16091 fecA; Fe(3+) dicitrate transport protein
D RGQ30_26770 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D RGQ30_00380 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGQ30_01050 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGQ30_30880 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGQ30_23350 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGQ30_23540 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGQ30_24960 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D RGQ30_02540 hypothetical protein K12538 hasF; outer membrane protein, type I secretion system
D RGQ30_26990 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RGQ30_21310 opmH; efflux transporter outer membrane subunit OpmH K12340 tolC; outer membrane protein
D RGQ30_14980 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system
D RGQ30_19020 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system
D RGQ30_30100 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_21470 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_23490 ompQ; pyoverdine export/recycling transporter outer membrane subunit OmpQ K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_27500 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D RGQ30_02790 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D RGQ30_16010 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D RGQ30_14420 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D RGQ30_12710 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D RGQ30_18580 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D RGQ30_19220 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE
D RGQ30_03880 autotransporter assembly complex family protein K07278 tamA; translocation and assembly module TamA
D RGQ30_03890 hypothetical protein K09800 tamB; translocation and assembly module TamB
D RGQ30_03320 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D RGQ30_03330 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D RGQ30_06490 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D RGQ30_08620 lptE; LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein
D RGQ30_22380 hypothetical protein K20543 bcsC; cellulose synthase operon protein C
D RGQ30_07630 transporter associated domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D RGQ30_08720 ZIP family metal transporter K16267 zipB; zinc and cadmium transporter
D RGQ30_01160 hypothetical protein K07238 TC.ZIP; zinc transporter, ZIP family
D RGQ30_21090 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D RGQ30_18360 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D RGQ30_21450 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D RGQ30_30110 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RGQ30_22810 acrB; efflux RND transporter permease AcrB K18138 acrB; multidrug efflux pump
D RGQ30_11440 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D RGQ30_08250 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D RGQ30_25480 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D RGQ30_10100 sodium/proline symporter K11928 putP; sodium/proline symporter
D RGQ30_22940 cation acetate symporter K14393 actP; cation/acetate symporter
D RGQ30_24620 cation acetate symporter K14393 actP; cation/acetate symporter
D RGQ30_00730 cation:proton antiporter K24160 NHA1; sodium/hydrogen antiporter
D RGQ30_17230 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D RGQ30_03360 monovalent cation:proton antiporter family protein K03455 KEA1_2_3; K+:H+ antiporter
D RGQ30_10980 cation:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter
D RGQ30_00680 hypothetical protein K26731 CHX; K+:H+ antiporter
D RGQ30_00600 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D RGQ30_00590 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D RGQ30_06690 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D RGQ30_09630 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D RGQ30_31530 hypothetical protein K03321 TC.SULP; sulfate permease, SulP family
D RGQ30_19110 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D RGQ30_06660 TRAP transporter substrate-binding protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D RGQ30_08810 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D RGQ30_07530 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D RGQ30_29300 AEC family transporter K24180 mleP; malate permease and related proteins
D RGQ30_13830 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D RGQ30_26260 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D RGQ30_27140 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D RGQ30_27150 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D RGQ30_27160 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D RGQ30_17530 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D RGQ30_14050 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D RGQ30_04760 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D RGQ30_20930 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D RGQ30_22770 SemiSWEET transporter K15383 K15383; MtN3 and saliva related transmembrane protein
D RGQ30_05510 TonB family protein K03832 tonB; periplasmic protein TonB
D RGQ30_23120 hypothetical protein K03832 tonB; periplasmic protein TonB
D RGQ30_24970 hypothetical protein K03832 tonB; periplasmic protein TonB
D RGQ30_07030 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D RGQ30_07040 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D RGQ30_02530 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D RGQ30_21100 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D RGQ30_15000 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D RGQ30_19030 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D RGQ30_18370 mexJ; multidrug efflux RND transporter periplasmic adaptor subunit MexJ K18302 mexJ; membrane fusion protein, multidrug efflux system
D RGQ30_30120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_22800 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_23510 macA; macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D RGQ30_27520 epsG; chain length determinant protein tyrosine kinase EpsG K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D RGQ30_27510 hypothetical protein K25590 epsF; protein tyrosine kinase modulator
D RGQ30_02800 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D RGQ30_14510 hypothetical protein K16348 ecnB; entericidin B
D RGQ30_12050 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:lto02044]
D RGQ30_26990 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RGQ30_21310 opmH; efflux transporter outer membrane subunit OpmH K12340 tolC; outer membrane protein
D RGQ30_02520 aprD; alkaline protease secretion ATP-binding protein AprD K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D RGQ30_02530 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D RGQ30_02540 hypothetical protein K12538 hasF; outer membrane protein, type I secretion system
D RGQ30_15010 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGQ30_19040 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D RGQ30_15000 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D RGQ30_19030 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D RGQ30_14980 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system
D RGQ30_19020 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system
D RGQ30_01740 hypothetical protein K02452 gspC; general secretion pathway protein C
D RGQ30_01650 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D RGQ30_03440 hypothetical protein K02453 gspD; general secretion pathway protein D
D RGQ30_01640 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGQ30_03430 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGQ30_04200 hypothetical protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D RGQ30_01630 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D RGQ30_01730 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D RGQ30_01720 hypothetical protein K02457 gspH; general secretion pathway protein H
D RGQ30_01710 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D RGQ30_01700 hypothetical protein K02459 gspJ; general secretion pathway protein J
D RGQ30_01690 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D RGQ30_01680 hypothetical protein K02461 gspL; general secretion pathway protein L
D RGQ30_01670 hypothetical protein K02462 gspM; general secretion pathway protein M
D RGQ30_01660 hypothetical protein K02463 gspN; general secretion pathway protein N
D RGQ30_04930 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGQ30_07750 pilin K02650 pilA; type IV pilus assembly protein PilA
D RGQ30_04950 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D RGQ30_03420 hypothetical protein K02653 pilC; type IV pilus assembly protein PilC
D RGQ30_04940 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RGQ30_05340 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D RGQ30_27900 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D RGQ30_27890 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D RGQ30_27870 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D RGQ30_08560 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RGQ30_15600 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D RGQ30_24340 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D RGQ30_24350 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D RGQ30_24360 fimbrial protein K02282 cpaE; pilus assembly protein CpaE
D RGQ30_24370 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D RGQ30_24380 hypothetical protein K12510 tadB; tight adherence protein B
D RGQ30_24390 hypothetical protein K12511 tadC; tight adherence protein C
D RGQ30_24400 hypothetical protein K27079 tadD; tight adherence protein D
D RGQ30_22230 hypothetical protein K27080 tadG; tight adherence protein G
D RGQ30_22720 hypothetical protein K27080 tadG; tight adherence protein G
D RGQ30_24320 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RGQ30_05330 YggT family protein K02221 yggT; YggT family protein
D RGQ30_11130 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D RGQ30_30390 bscC; SctC family type III secretion system outer membrane ring subunit BscC K03219 yscC; type III secretion protein C
D RGQ30_30610 hypothetical protein K03220 yscD; type III secretion protein D
D RGQ30_30360 hypothetical protein K03222 yscJ; type III secretion protein J
D RGQ30_30600 hrcN; type III secretion system ATPase HrcN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D RGQ30_30570 sctR; type III secretion system export apparatus subunit SctR K03226 yscR; type III secretion protein R
D RGQ30_30560 fliQ_2; flagellar biosynthesis protein FliQ K03227 yscS; type III secretion protein S
D RGQ30_30550 hypothetical protein K03228 yscT; type III secretion protein T
D RGQ30_30540 yscU; type III secretion system export apparatus switch protein YscU K03229 yscU; type III secretion protein U
D RGQ30_30620 sctV; type III secretion system export apparatus subunit SctV K03230 yscV; type III secretion protein V
D RGQ30_10500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGQ30_10490 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGQ30_10290 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D RGQ30_10250 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGQ30_10220 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGQ30_10170 hypothetical protein K02417 fliN; flagellar motor switch protein FliN
D RGQ30_10160 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RGQ30_10150 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGQ30_10140 fliQ_1; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGQ30_10130 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGQ30_04440 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D RGQ30_25980 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase
D RGQ30_29500 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D RGQ30_29490 DotU family type VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D RGQ30_29480 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D RGQ30_01290 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D RGQ30_01280 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D RGQ30_01270 tssE; type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF
D RGQ30_01240 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D RGQ30_01230 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D RGQ30_01220 tssA; type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA
D RGQ30_01250 hcp_1; type VI secretion system receptor/chaperone Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D RGQ30_01260 hcp_2; type VI secretion system receptor/chaperone Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D RGQ30_29460 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D RGQ30_01300 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D RGQ30_29510 hypothetical protein K11890 impM; type VI secretion system protein ImpM
D RGQ30_29410 hypothetical protein K11894 impI; type VI secretion system protein ImpI
D RGQ30_04870 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D RGQ30_01850 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D RGQ30_26840 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D RGQ30_28440 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D RGQ30_26830 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D RGQ30_12380 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D RGQ30_28110 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D RGQ30_05070 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D RGQ30_03050 hypothetical protein K03110 ftsY; fused signal recognition particle receptor
D RGQ30_26850 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D RGQ30_31920 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D RGQ30_03650 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D RGQ30_03660 tatB; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D RGQ30_03670 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:lto02042]
D RGQ30_09090 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D RGQ30_26150 hemolysin family protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:lto02022]
D RGQ30_24020 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D RGQ30_24010 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D RGQ30_00930 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RGQ30_00920 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RGQ30_20950 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D RGQ30_13810 hypothetical protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D RGQ30_13820 kdpE; two-component system response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D RGQ30_30160 hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RGQ30_21060 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D RGQ30_00960 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RGQ30_20960 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RGQ30_21070 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D RGQ30_25110 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D RGQ30_09410 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_23310 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_02120 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_10720 hypothetical protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D RGQ30_05990 hypothetical protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RGQ30_31390 hypothetical protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D RGQ30_02130 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGQ30_10710 response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D RGQ30_13390 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D RGQ30_13400 ntrC; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D RGQ30_00570 ATP-binding protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D RGQ30_00580 esaR; response regulator transcription factor EsaR K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D RGQ30_22010 sigma-54 dependent transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC
D RGQ30_13300 cache domain-containing protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RGQ30_25290 histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D RGQ30_09990 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_10460 cheAY2; chemotaxis histidine kinase/response regulator CheAY2 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_25330 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_09970 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10120 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10440 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_25310 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_25340 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10750 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_15800 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_25370 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_12090 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGQ30_08150 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RGQ30_10430 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RGQ30_06670 PAS domain S-box protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D RGQ30_06680 fixJ; oxygen response regulator transcription factor FixJ K11712 dctR; two-component system, LuxR family, response regulator DctR
D RGQ30_01060 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGQ30_14020 ATP-binding protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D RGQ30_01070 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D RGQ30_14030 response regulator transcription factor K15012 regA; two-component system, response regulator RegA
D RGQ30_00470 hypothetical protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D RGQ30_24420 hypothetical protein K02486 K02486; two-component system, sensor kinase [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:lto02035]
D RGQ30_09990 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_10460 cheAY2; chemotaxis histidine kinase/response regulator CheAY2 K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_25330 hypothetical protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D RGQ30_10010 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_24650 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_25380 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D RGQ30_10740 cheD; chemoreceptor glutamine deamidase CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D RGQ30_10730 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGQ30_25350 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D RGQ30_10750 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_15800 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_25370 cheB; chemotaxis-specific protein-glutamate methyltransferase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D RGQ30_12090 chemotaxis protein CheB K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D RGQ30_09970 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10120 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10440 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_25310 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_25340 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D RGQ30_10450 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D RGQ30_08150 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RGQ30_10430 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D RGQ30_00430 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_02260 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_06020 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_06200 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_09960 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_10000 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_10470 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_13410 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_13800 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_20670 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_24640 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_24660 PAS domain S-box protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_25390 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D RGQ30_15630 PAS domain-containing methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D RGQ30_10220 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D RGQ30_10210 hypothetical protein K02413 fliJ; flagellar protein FliJ
D RGQ30_10160 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D RGQ30_10150 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D RGQ30_10140 fliQ_1; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D RGQ30_10130 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D RGQ30_10500 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D RGQ30_10490 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D RGQ30_10240 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D RGQ30_10180 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D RGQ30_10170 hypothetical protein K02417 fliN; flagellar motor switch protein FliN
D RGQ30_10250 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D RGQ30_10670 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D RGQ30_10590 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D RGQ30_10660 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D RGQ30_10190 hypothetical protein K02415 fliL; flagellar protein FliL
D RGQ30_10260 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE
D RGQ30_10600 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D RGQ30_10610 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D RGQ30_10620 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D RGQ30_10640 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D RGQ30_10650 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D RGQ30_10630 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D RGQ30_10690 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D RGQ30_10700 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D RGQ30_10570 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D RGQ30_09670 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10350 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10360 flagellin K02406 fliC; flagellin
D RGQ30_10370 flagellin FliC K02406 fliC; flagellin
D RGQ30_10380 flagellin domain-containing protein K02406 fliC; flagellin
D RGQ30_10330 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D RGQ30_10320 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D RGQ30_10310 flagellar protein FliT K02423 fliT; flagellar protein FliT
D RGQ30_10390 hypothetical protein K02403 flhD; flagellar transcriptional activator FlhD
D RGQ30_14780 flhD; flagellar transcriptional regulator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D RGQ30_10400 flhC_1; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGQ30_14770 flhC_2; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D RGQ30_10530 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D RGQ30_10410 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D RGQ30_10420 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D RGQ30_05940 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGQ30_10580 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D RGQ30_10340 hypothetical protein K06603 flaG; flagellar protein FlaG
D RGQ30_10510 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF
D RGQ30_08560 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D RGQ30_07750 pilin K02650 pilA; type IV pilus assembly protein PilA
D RGQ30_04950 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D RGQ30_03420 hypothetical protein K02653 pilC; type IV pilus assembly protein PilC
D RGQ30_04940 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D RGQ30_04930 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D RGQ30_27870 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D RGQ30_27890 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D RGQ30_27900 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D RGQ30_15600 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D RGQ30_05340 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D RGQ30_24320 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D RGQ30_24340 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D RGQ30_24350 type II and III secretion system protein family protein K02280 cpaC; pilus assembly protein CpaC
D RGQ30_24360 fimbrial protein K02282 cpaE; pilus assembly protein CpaE
D RGQ30_24370 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lto04812]
D RGQ30_28780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGQ30_04820 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGQ30_04810 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D RGQ30_10810 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D RGQ30_10800 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D RGQ30_10790 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D RGQ30_04350 ParA family protein K03496 parA; chromosome partitioning protein
D RGQ30_31820 ParA family protein K03496 parA; chromosome partitioning protein
D RGQ30_04370 ParA family protein K03496 parA; chromosome partitioning protein
D RGQ30_31810 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lto04147]
D RGQ30_19560 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D RGQ30_12600 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D RGQ30_07250 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D RGQ30_07280 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D RGQ30_07290 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D RGQ30_06630 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D RGQ30_19150 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D RGQ30_23150 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D RGQ30_15830 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D RGQ30_28330 tuf_1; elongation factor Tu K02358 tuf; elongation factor Tu
D RGQ30_28450 tuf_2; elongation factor Tu K02358 tuf; elongation factor Tu
D RGQ30_03640 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D RGQ30_04110 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_13130 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_16250 AMP-dependent synthetase/ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_22040 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D RGQ30_03960 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_09130 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_17220 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18490 acetyl-CoA C-acyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_18530 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D RGQ30_07920 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D RGQ30_08820 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D RGQ30_16450 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D RGQ30_07840 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D RGQ30_07780 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D RGQ30_17900 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D RGQ30_27990 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D RGQ30_06570 hypothetical protein K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D RGQ30_07130 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D RGQ30_06580 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D RGQ30_13490 lpdA_1; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_18640 lpdA_2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D RGQ30_23900 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit
D RGQ30_00660 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D RGQ30_12370 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D RGQ30_01820 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D RGQ30_30840 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:lto02048]
D RGQ30_27720 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RGQ30_00170 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D RGQ30_27700 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RGQ30_00160 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D RGQ30_27690 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RGQ30_00150 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D RGQ30_31200 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D RGQ30_02240 hypothetical protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D RGQ30_04820 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D RGQ30_28780 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D RGQ30_19590 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D RGQ30_14250 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D RGQ30_11760 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RGQ30_18700 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D RGQ30_11380 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:lto04052]
D RGQ30_13030 acyl-CoA-binding protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lto01504]
D RGQ30_00930 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D RGQ30_00920 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D RGQ30_30120 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_22800 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D RGQ30_30110 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D RGQ30_22810 acrB; efflux RND transporter permease AcrB K18138 acrB; multidrug efflux pump
D RGQ30_30100 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_21470 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_23490 ompQ; pyoverdine export/recycling transporter outer membrane subunit OmpQ K18139 oprM; outer membrane protein, multidrug efflux system
D RGQ30_21480 mexL; efflux system transcriptional repressor MexL K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
D RGQ30_18370 mexJ; multidrug efflux RND transporter periplasmic adaptor subunit MexJ K18302 mexJ; membrane fusion protein, multidrug efflux system
D RGQ30_18360 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D RGQ30_21450 efflux RND transporter permease subunit K18303 mexK; multidrug efflux pump
D RGQ30_22860 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D RGQ30_26990 TolC family outer membrane protein K12340 tolC; outer membrane protein
D RGQ30_21310 opmH; efflux transporter outer membrane subunit OpmH K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lto03100]
D RGQ30_t00180 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D RGQ30_t00190 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGQ30_t00150 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D RGQ30_t00220 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D RGQ30_t00260 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D RGQ30_t00280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D RGQ30_t00290 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGQ30_t00070 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGQ30_t00060 tRNA-Met K14230 tRNA-Met; tRNA Met
D RGQ30_t00300 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D RGQ30_t00390 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D RGQ30_22780 SDR family oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D RGQ30_27190 hypothetical protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RGQ30_08260 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D RGQ30_13110 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D RGQ30_24300 indolepyruvate ferredoxin oxidoreductase family protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D RGQ30_14920 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D RGQ30_22100 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D RGQ30_09260 pqqC; pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D RGQ30_12550 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D RGQ30_14460 hypothetical protein K18208 RNLS; renalase [EC:1.6.3.5]
D RGQ30_06070 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGQ30_13890 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGQ30_12360 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D RGQ30_22620 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D RGQ30_26860 msrA_2; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RGQ30_17820 msrA_1; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D RGQ30_15500 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RGQ30_17810 hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D RGQ30_11290 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D RGQ30_24130 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D RGQ30_13230 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RGQ30_25400 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D RGQ30_22610 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D RGQ30_23240 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D RGQ30_26630 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RGQ30_23620 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D RGQ30_22630 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D RGQ30_23420 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D RGQ30_30030 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D RGQ30_16960 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RGQ30_19430 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D RGQ30_29200 hypothetical protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RGQ30_29210 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D RGQ30_09240 pqqE; pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D RGQ30_26970 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RGQ30_14320 hypothetical protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D RGQ30_24200 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D RGQ30_09770 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207]
D RGQ30_07640 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D RGQ30_30630 hypothetical protein K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D RGQ30_16680 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D RGQ30_16690 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D RGQ30_19270 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D RGQ30_23450 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D RGQ30_15920 pyruvate, water dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D RGQ30_05540 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D RGQ30_15510 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D RGQ30_01460 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D RGQ30_03270 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D RGQ30_24480 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D RGQ30_02070 polysaccharide pyruvyl transferase family protein K19431 epsO; pyruvyl transferase EpsO [EC:2.-.-.-]
D RGQ30_29020 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGQ30_07080 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGQ30_30980 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGQ30_14890 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGQ30_22180 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D RGQ30_12650 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D RGQ30_22900 alkyl sulfatase dimerization domain-containing protein K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D RGQ30_11140 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RGQ30_15610 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D RGQ30_28910 hypothetical protein K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D RGQ30_22390 bcsZ; cellulose synthase complex periplasmic endoglucanase BcsZ K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D RGQ30_00780 hypothetical protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D RGQ30_18220 hypothetical protein K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199]
D RGQ30_00530 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D RGQ30_31510 qqaR; N-acyl homoserine lactone acylase QqaR K07116 pvdQ; acyl-homoserine-lactone acylase [EC:3.5.1.97]
D RGQ30_05560 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D RGQ30_02910 GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-]
D RGQ30_15260 nucleoside triphosphate pyrophosphatase K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D RGQ30_25060 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D RGQ30_18250 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D RGQ30_31690 hydroxypyruvate isomerase family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D RGQ30_29730 methylmalonyl-CoA mutase family protein K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D RGQ30_14720 cphA_1; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RGQ30_14730 cphA_2; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D RGQ30_05470 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D RGQ30_19450 hypothetical protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D RGQ30_29680 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D RGQ30_16720 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D RGQ30_16710 lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D RGQ30_19410 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D RGQ30_15040 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D RGQ30_19420 ferredoxin family protein K05524 fdxA; ferredoxin
D RGQ30_11370 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D RGQ30_23910 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D RGQ30_11670 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D RGQ30_08550 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D RGQ30_08410 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D RGQ30_28900 bcsB_2; cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB K20541 bcsB; cellulose synthase operon protein B
D RGQ30_22400 bcsB_1; cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D RGQ30_16420 heme biosynthesis protein HemY K02498 hemY; HemY protein
D RGQ30_23960 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D RGQ30_23970 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D RGQ30_29860 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D RGQ30_13310 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D RGQ30_09660 NAD(P)H-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D RGQ30_31020 alpha/beta fold hydrolase K24084 aidA; quorum-quenching protein AidA
C 99999 Others
D RGQ30_27270 DoxX family protein K15977 K15977; putative oxidoreductase
D RGQ30_16540 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D RGQ30_08920 cold-shock protein K03704 cspA; cold shock protein
D RGQ30_11020 cold-shock protein K03704 cspA; cold shock protein
D RGQ30_29840 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D RGQ30_16380 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D RGQ30_18620 Tex family protein K06959 tex; protein Tex
C 99974 Translation
D RGQ30_27330 ligase-associated DNA damage response exonuclease K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D RGQ30_08930 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D RGQ30_18340 tig; trigger factor K03545 tig; trigger factor
D RGQ30_07800 hypothetical protein K03187 ureE; urease accessory protein
D RGQ30_17340 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D RGQ30_17330 urease accessory protein UreF K03188 ureF; urease accessory protein
D RGQ30_17320 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D RGQ30_17380 urease accessory protein UreD K03190 ureD; urease accessory protein
D RGQ30_15860 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D RGQ30_29870 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D RGQ30_08160 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D RGQ30_07600 OsmC family protein K07397 yhfA; putative redox protein
D RGQ30_27960 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D RGQ30_09060 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D RGQ30_14960 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D RGQ30_01380 hypothetical protein K07460 yraN; putative endonuclease
D RGQ30_16270 hypothetical protein K07461 K07461; putative endonuclease
D RGQ30_20090 hypothetical protein K07461 K07461; putative endonuclease
D RGQ30_00520 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D RGQ30_16300 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D RGQ30_20420 hypothetical protein K07483 K07483; transposase
D RGQ30_27830 transposase K07491 rayT; REP-associated tyrosine transposase
D RGQ30_19870 hypothetical protein K07497 K07497; putative transposase
D RGQ30_20020 hypothetical protein K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D RGQ30_24500 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D RGQ30_24220 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D RGQ30_23950 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D RGQ30_30870 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D RGQ30_23840 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D RGQ30_27540 lipopolysaccharide biosynthesis protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D RGQ30_15490 septation protein A K06190 ispZ; intracellular septation protein
D RGQ30_12210 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D RGQ30_01810 murein hydrolase activator EnvC K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D RGQ30_19760 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D RGQ30_25130 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D RGQ30_13210 PhoH family protein K07175 phoH2; PhoH-like ATPase
D RGQ30_12190 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D RGQ30_14870 putative nucleotidyltransferase substrate binding domain-containing protein K07182 K07182; CBS domain-containing protein
D RGQ30_07810 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D RGQ30_16310 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D RGQ30_03480 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D RGQ30_05390 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB
D RGQ30_16000 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D RGQ30_14330 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D RGQ30_20920 OmpW family protein K07275 ompW; outer membrane protein
D RGQ30_18790 AsmA family protein K07290 yhjG; AsmA family protein
D RGQ30_12040 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D RGQ30_12000 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RGQ30_12070 hypothetical protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D RGQ30_14380 rodZ; cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D RGQ30_13510 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D RGQ30_23100 hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin
D RGQ30_28020 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D RGQ30_04470 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D RGQ30_27930 hypothetical protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D RGQ30_11540 MSMEG_0569 family flavin-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D RGQ30_23070 imelysin family protein K07231 K07231; putative iron-regulated protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D RGQ30_14630 cvpA; colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D RGQ30_14700 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D RGQ30_09270 pqqB; pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D RGQ30_09250 pqqD; pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D RGQ30_14950 group II truncated hemoglobin K06886 glbN; hemoglobin
D RGQ30_20840 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D RGQ30_00340 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RGQ30_06800 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RGQ30_11870 hypothetical protein K07001 K07001; NTE family protein
D RGQ30_18230 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RGQ30_13050 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D RGQ30_01770 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D RGQ30_02270 erpA_1; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D RGQ30_07540 erpA_2; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D RGQ30_19710 hypothetical protein K07058 K07058; membrane protein
D RGQ30_09100 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D RGQ30_29360 heme-binding protein K11477 glcG; glc operon protein GlcG
D RGQ30_23200 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D RGQ30_24560 LemA family protein K03744 lemA; LemA protein
D RGQ30_14620 hypothetical protein K03749 dedD; DedD protein
D RGQ30_21520 hypothetical protein K01421 yhgE; putative membrane protein
D RGQ30_06010 phage holin family protein K08972 K08972; putative membrane protein
D RGQ30_14810 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D RGQ30_15620 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D RGQ30_24570 YgcG family protein K06872 K06872; uncharacterized protein
D RGQ30_04890 ATP-binding protein K06923 K06923; uncharacterized protein
D RGQ30_31680 CoA-binding protein K06929 K06929; uncharacterized protein
D RGQ30_19840 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D RGQ30_14860 hypothetical protein K06940 K06940; uncharacterized protein
D RGQ30_05090 hypothetical protein K06950 K06950; uncharacterized protein
D RGQ30_20100 CocE/NonD family hydrolase K06978 K06978; uncharacterized protein
D RGQ30_22910 VOC family protein K06991 K06991; uncharacterized protein
D RGQ30_26570 C39 family peptidase K06992 K06992; uncharacterized protein
D RGQ30_00810 cupin domain-containing protein K06995 K06995; uncharacterized protein
D RGQ30_21860 hypothetical protein K06996 K06996; uncharacterized protein
D RGQ30_05480 alpha/beta fold hydrolase K07000 K07000; uncharacterized protein
D RGQ30_04340 RND family transporter K07003 K07003; uncharacterized protein
D RGQ30_08120 RND family transporter K07003 K07003; uncharacterized protein
D RGQ30_28700 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D RGQ30_26900 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D RGQ30_29030 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D RGQ30_30080 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D RGQ30_10940 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D RGQ30_17600 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D RGQ30_17630 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D RGQ30_22000 metal-dependent hydrolase K07044 K07044; uncharacterized protein
D RGQ30_09390 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RGQ30_13000 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D RGQ30_17170 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein
D RGQ30_06340 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RGQ30_11720 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RGQ30_31380 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RGQ30_31850 TSUP family transporter K07090 K07090; uncharacterized protein
D RGQ30_19260 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RGQ30_24090 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D RGQ30_02290 PhoX family phosphatase K07093 K07093; uncharacterized protein
D RGQ30_19630 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D RGQ30_00480 YeeE/YedE thiosulfate transporter family protein K07112 K07112; uncharacterized protein
D RGQ30_00490 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RGQ30_07010 YeeE/YedE family protein K07112 K07112; uncharacterized protein
D RGQ30_11520 methanogenesis marker 2 protein K07123 K07123; uncharacterized protein
D RGQ30_17570 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D RGQ30_21790 hypothetical protein K07126 K07126; uncharacterized protein
D RGQ30_05240 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein
D RGQ30_13910 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein
D RGQ30_04170 hypothetical protein K09004 K09004; uncharacterized protein
D RGQ30_08900 hypothetical protein K09005 K09005; uncharacterized protein
D RGQ30_05850 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D RGQ30_28720 YbeD family protein K09158 K09158; uncharacterized protein
D RGQ30_07360 gntA; guanitoxin biosynthesis heme-dependent pre-guanitoxin N-hydroxylase GntA K09190 K09190; uncharacterized protein
D RGQ30_05150 DUF2075 domain-containing protein K09384 K09384; uncharacterized protein
D RGQ30_24190 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D RGQ30_06100 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D RGQ30_12200 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D RGQ30_08840 Trm112 family protein K09791 K09791; uncharacterized protein
D RGQ30_29580 hypothetical protein K09792 K09792; uncharacterized protein
D RGQ30_22310 hypothetical protein K09797 K09797; uncharacterized protein
D RGQ30_15840 hypothetical protein K09801 K09801; uncharacterized protein
D RGQ30_14300 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D RGQ30_16400 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D RGQ30_07970 hypothetical protein K09921 K09921; uncharacterized protein
D RGQ30_19900 YggL family protein K09923 K09923; uncharacterized protein
D RGQ30_20480 hypothetical protein K09924 K09924; uncharacterized protein
D RGQ30_29610 hypothetical protein K09926 K09926; uncharacterized protein
D RGQ30_11150 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D RGQ30_19660 hypothetical protein K09937 K09937; uncharacterized protein
D RGQ30_23480 PepSY-associated TM helix domain-containing protein K09939 K09939; uncharacterized protein
D RGQ30_25870 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D RGQ30_23040 DUF1513 domain-containing protein K09947 K09947; uncharacterized protein
D RGQ30_09920 hypothetical protein K09950 K09950; uncharacterized protein
D RGQ30_13840 DUF3820 family protein K09954 K09954; uncharacterized protein
D RGQ30_11460 nuclear transport factor 2 family protein K09958 K09958; uncharacterized protein
D RGQ30_09150 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D RGQ30_17080 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D RGQ30_07370 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein
D RGQ30_19530 VWA domain-containing protein K09989 K09989; uncharacterized protein
D RGQ30_23050 hypothetical protein K07338 K07338; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024