+E Transcription factors KO #

  Transcription Factors - Luteitalea sp. TBR-22

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D TBR22_A45650 ada; bifunctional transcriptional activator/DNA repair enzyme protein Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D TBR22_A21900 hypothetical protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family C DeoR family C LacI family C GntR family D TBR22_A19870 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D TBR22_A35290 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D TBR22_A25030 hypothetical protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA C Lrp/AsnC family C LuxR family C MarR family D TBR22_A41960 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D TBR22_A28000 hypothetical protein K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D TBR22_A33910 merR; MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D TBR22_A00210 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D TBR22_A43130 hypothetical protein K22297 furA; Fur family transcriptional regulator, stress-responsive regulator C IclR family C CRP/FNR family D TBR22_A15650 hypothetical protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator C Rrf2 family C ArsR family D TBR22_A21530 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D TBR22_A07150 hypothetical protein K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family C PadR family D TBR22_A51610 hypothetical protein K10947 K10947; PadR family transcriptional regulator D TBR22_A06400 ywzG; putative DNA-binding protein YwzG K10947 K10947; PadR family transcriptional regulator C Other families D TBR22_A08070 transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D TBR22_A32330 hypothetical protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D TBR22_A16740 BlaI family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D TBR22_A22570 BlaI family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D TBR22_A33720 transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D TBR22_A46140 hypothetical protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D TBR22_A34080 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D TBR22_A00900 hypothetical protein K12146 hyfR; hydrogenase-4 transcriptional activator D TBR22_A32690 hypothetical protein K12146 hyfR; hydrogenase-4 transcriptional activator D TBR22_A00960 hypothetical protein K15836 fhlA; formate hydrogenlyase transcriptional activator D TBR22_A18410 hypothetical protein K15836 fhlA; formate hydrogenlyase transcriptional activator D TBR22_A25720 nifA; sigma-54-dependent Fis family transcriptional regulator K02584 nifA; Nif-specific regulatory protein D TBR22_A20980 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D TBR22_A15970 transcriptional regulator K07726 K07726; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D TBR22_A11590 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D TBR22_A53550 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TBR22_A25980 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D TBR22_A20910 hypothetical protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D TBR22_A07950 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D TBR22_A33090 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D TBR22_A07240 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D TBR22_A01110 hypothetical protein K07735 algH; putative transcriptional regulator D TBR22_A35490 UPF0301 protein K07735 algH; putative transcriptional regulator D TBR22_A31760 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D TBR22_A48000 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D TBR22_A31360 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D TBR22_A49000 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0