+E Transcription factors KO #

  Transcription Factors - Luteimonas chenhongjianii

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D CNR27_03825 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CNR27_08755 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D CNR27_07845 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D CNR27_00995 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D CNR27_13155 DNA methylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family D CNR27_05900 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CNR27_06970 transcriptional regulator K27042 trpI; LysR family transcriptional regulator, trpBA operon transcriptional activator C DeoR family C LacI family D CNR27_09995 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CNR27_14500 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CNR27_12290 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CNR27_04155 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor C GntR family C TetR/AcrR family D CNR27_11115 hypothetical protein K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D CNR27_01225 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D CNR27_03890 hypothetical protein K19335 bdcR; TetR/AcrR family transcriptional regulator, repressor for divergent bdcA D CNR27_11015 HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator C Lrp/AsnC family D CNR27_02390 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D CNR27_08930 transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin C MerR family D CNR27_08835 hypothetical protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D CNR27_09245 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CNR27_13210 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family C CRP/FNR family D CNR27_14935 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CNR27_07175 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family C ArsR family D CNR27_11180 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CNR27_11195 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family C PadR family D CNR27_12135 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D CNR27_03385 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D CNR27_00095 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CNR27_00150 DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CNR27_09705 Fis family transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D CNR27_00270 hypothetical protein K07727 K07727; putative transcriptional regulator D CNR27_12035 transcriptional regulator K07729 K07729; putative transcriptional regulator D CNR27_02555 transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D CNR27_03465 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D CNR27_03705 regulator K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D CNR27_14090 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D CNR27_00875 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CNR27_09255 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D CNR27_09100 thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CNR27_09105 TenA family transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D CNR27_06755 transcriptional regulator K03567 gcvR; glycine cleavage system transcriptional repressor D CNR27_05895 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D CNR27_03415 transcriptional regulator K07734 paiB; transcriptional regulator D CNR27_08255 hypothetical protein K07734 paiB; transcriptional regulator D CNR27_13445 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D CNR27_09405 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D CNR27_05170 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D CNR27_05230 transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0