+D GENES KO
#
KEGG Orthology (KO) - Lactobacillus xylocopicola
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:lxo00010]
D KIM322_05910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KIM322_07130 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KIM322_10330 fbaA; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_14360 iron ABC transporter substrate-binding protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_05300 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KIM322_05280 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KIM322_14140 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KIM322_05290 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KIM322_11110 gpmA_1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_13540 gpmA_2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_08620 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KIM322_07140 kpyK; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KIM322_02460 hicD2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_08240 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_05120 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KIM322_03940 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KIM322_05970 bgla; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KIM322_11200 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KIM322_13990 pbg9; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KIM322_04440 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle)
D KIM322_08260 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
C 00030 Pentose phosphate pathway [PATH:lxo00030]
D KIM322_05910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KIM322_10530 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D KIM322_04830 isomerase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D KIM322_15050 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D KIM322_09450 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D KIM322_03980 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D KIM322_04030 phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D KIM322_00820 hypothetical protein K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D KIM322_12070 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D KIM322_05120 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KIM322_01340 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KIM322_12540 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KIM322_10330 fbaA; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_14360 iron ABC transporter substrate-binding protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_07130 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:lxo00040]
D KIM322_04570 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KIM322_09450 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:lxo00051]
D KIM322_12260 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D KIM322_05860 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D KIM322_07130 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KIM322_02380 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D KIM322_13350 fruK; tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D KIM322_10330 fbaA; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_14360 iron ABC transporter substrate-binding protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_05300 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KIM322_13340 fruA; PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D KIM322_12280 PTS fructose transporter subunit IIA K11194 levD; fructose PTS system EIIA component [EC:2.7.1.202]
D KIM322_03120 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KIM322_03900 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KIM322_02770 manL; PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D KIM322_02780 manM; PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_03100 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_03270 PTS sugar transporter K02795 manY; mannose PTS system EIIC component
D KIM322_12310 manY2; PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_02790 manN; PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D KIM322_03110 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D KIM322_12300 manZ2; PTS trehalose transporter subunit IIBC K02796 manZ; mannose PTS system EIID component
D KIM322_02370 pts2A; PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D KIM322_02360 mtlA; PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D KIM322_04840 pthA; PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
C 00052 Galactose metabolism [PATH:lxo00052]
D KIM322_11090 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D KIM322_11080 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D KIM322_02840 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D KIM322_04570 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KIM322_05120 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KIM322_07130 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KIM322_03150 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D KIM322_03050 galactose-6-phosphate isomerase K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D KIM322_03060 galactose-6-phosphate isomerase K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D KIM322_01000 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D KIM322_01020 invertase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D KIM322_12270 glycosyl hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D KIM322_03080 tagatose-6-phosphate ketose K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism
D KIM322_14390 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D KIM322_14380 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component
C 00500 Starch and sucrose metabolism [PATH:lxo00500]
D KIM322_01010 hypothetical protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D KIM322_01000 beta-fructofuranosidase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D KIM322_01020 invertase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D KIM322_12270 glycosyl hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D KIM322_04570 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KIM322_03930 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KIM322_03920 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KIM322_00310 pts6C; permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_03960 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_04500 ptcC; permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_05960 ywbA; putative permease IIC component YwbA K02761 celB; cellobiose PTS system EIIC component
D KIM322_11190 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_12620 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_14770 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KIM322_03940 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KIM322_05970 bgla; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KIM322_11200 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KIM322_13990 pbg9; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D KIM322_05920 beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D KIM322_05120 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KIM322_05910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KIM322_12260 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:lxo00520]
D KIM322_05940 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D KIM322_13870 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D KIM322_14910 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D KIM322_12260 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D KIM322_05450 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KIM322_05440 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D KIM322_12640 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D KIM322_12380 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KIM322_05410 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KIM322_04430 nanE; putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D KIM322_04520 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D KIM322_04440 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D KIM322_05120 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KIM322_04570 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KIM322_11090 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D KIM322_11080 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D KIM322_02840 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D KIM322_03120 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KIM322_03900 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KIM322_02770 manL; PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D KIM322_02780 manM; PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_03100 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_03270 PTS sugar transporter K02795 manY; mannose PTS system EIIC component
D KIM322_12310 manY2; PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_02790 manN; PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D KIM322_03110 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D KIM322_12300 manZ2; PTS trehalose transporter subunit IIBC K02796 manZ; mannose PTS system EIID component
D KIM322_05910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KIM322_05860 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:lxo00620]
D KIM322_05800 ackB; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D KIM322_05380 eutD; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KIM322_07140 kpyK; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KIM322_09890 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D KIM322_15060 poxB; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D KIM322_02460 hicD2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_08240 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_00680 ldhD; lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D KIM322_04470 lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D KIM322_08260 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:lxo00630]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KIM322_02930 serA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D KIM322_09740 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00640 Propanoate metabolism [PATH:lxo00640]
D KIM322_05800 ackB; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D KIM322_05380 eutD; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KIM322_02460 hicD2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_08240 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:lxo00650]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KIM322_02700 ssdh; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KIM322_04600 hmcS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:lxo00562]
D KIM322_01860 iolG; inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D KIM322_01880 hypothetical protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D KIM322_01890 hypothetical protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D KIM322_01900 hypothetical protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D KIM322_01810 iolE; inosose dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D KIM322_05300 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:lxo00190]
D KIM322_06270 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D KIM322_06290 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D KIM322_06280 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D KIM322_06260 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D KIM322_06300 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D KIM322_06230 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D KIM322_06250 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D KIM322_06240 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D KIM322_08640 proton-efflux P-type ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1]
D KIM322_07490 ppaC; putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:lxo00710]
D KIM322_05290 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KIM322_05280 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KIM322_14140 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KIM322_10330 fbaA; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_14360 iron ABC transporter substrate-binding protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_03980 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D KIM322_05300 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KIM322_09450 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:lxo00720]
D KIM322_08260 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KIM322_07590 fhs1; formate--tetrahydrofolate ligase 1 K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D KIM322_09610 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D KIM322_05380 eutD; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KIM322_05800 ackB; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:lxo00680]
D KIM322_02930 serA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D KIM322_08620 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KIM322_10330 fbaA; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_14360 iron ABC transporter substrate-binding protein K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D KIM322_07130 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KIM322_05800 ackB; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D KIM322_05380 eutD; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KIM322_11110 gpmA_1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_13540 gpmA_2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_02350 hypothetical protein K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:lxo00910]
D KIM322_09740 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KIM322_12430 arcC2; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D KIM322_10510 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:lxo00061]
D KIM322_09370 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D KIM322_04890 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:lxo00071]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:lxo00561]
D KIM322_05840 glpK1; glycerol kinase 1 K00864 glpK; glycerol kinase [EC:2.7.1.30]
D KIM322_14050 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D KIM322_09380 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D KIM322_07450 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KIM322_09020 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KIM322_04340 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D KIM322_03670 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D KIM322_03700 phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KIM322_05890 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:lxo00564]
D KIM322_05100 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D KIM322_05850 glycerol-3-phosphate dehydrogenase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D KIM322_07450 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KIM322_09020 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D KIM322_03370 tagD; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D KIM322_04340 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D KIM322_03330 glpQ1; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D KIM322_08930 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D KIM322_04910 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D KIM322_01280 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:lxo00230]
D KIM322_06690 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D KIM322_05120 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KIM322_01340 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KIM322_12540 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D KIM322_08750 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D KIM322_03760 hprT; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D KIM322_05520 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D KIM322_03520 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D KIM322_12210 xpt; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D KIM322_12190 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D KIM322_09530 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D KIM322_13050 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D KIM322_14960 deoxyguanosine kinase K25641 dgk2; deoxyguanosine kinase [EC:2.7.1.113]
D KIM322_08120 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D KIM322_04800 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D KIM322_14950 deoxyadenosine kinase K10353 E2.7.1.76; deoxyadenosine kinase [EC:2.7.1.76]
D KIM322_04040 hypothetical protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D KIM322_11460 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D KIM322_12430 arcC2; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:lxo00240]
D KIM322_07550 carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KIM322_07560 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KIM322_08960 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D KIM322_12390 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D KIM322_07260 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D KIM322_03820 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D KIM322_06220 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D KIM322_04040 hypothetical protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D KIM322_12730 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D KIM322_10780 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D KIM322_11040 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D KIM322_06180 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:lxo00250]
D KIM322_02270 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D KIM322_13510 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D KIM322_01240 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D KIM322_13740 asnH; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D KIM322_02700 ssdh; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D KIM322_09740 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KIM322_07550 carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KIM322_07560 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KIM322_05450 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:lxo00260]
D KIM322_14530 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KIM322_14460 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KIM322_02930 serA; glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D KIM322_11110 gpmA_1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_13540 gpmA_2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_00430 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
C 00270 Cysteine and methionine metabolism [PATH:lxo00270]
D KIM322_14640 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KIM322_10460 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D KIM322_06710 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D KIM322_14530 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KIM322_14460 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KIM322_14730 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KIM322_02460 hicD2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_08240 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_00430 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
C 00280 Valine, leucine and isoleucine degradation [PATH:lxo00280]
D KIM322_14730 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D KIM322_00650 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KIM322_04600 hmcS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:lxo00290]
D KIM322_14730 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:lxo00300]
D KIM322_14530 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KIM322_14460 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KIM322_14490 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KIM322_14480 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D KIM322_14510 dapH; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D KIM322_13220 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D KIM322_14540 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D KIM322_14520 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D KIM322_03340 araT; aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D KIM322_08060 aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D KIM322_14470 aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D KIM322_14500 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D KIM322_02260 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KIM322_12050 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:lxo00310]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KIM322_00430 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D KIM322_02700 ssdh; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:lxo00220]
D KIM322_12450 arcB; ornithine carbamoyltransferase, catabolic K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D KIM322_12460 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D KIM322_09740 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KIM322_07550 carbamoyl-phosphate synthase (glutamine-hydrolyzing) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D KIM322_07560 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D KIM322_12430 arcC2; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism [PATH:lxo00330]
D KIM322_00670 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D KIM322_02530 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D KIM322_10270 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism
D KIM322_01390 flavocytochrome c K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism
D KIM322_02700 ssdh; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:lxo00430]
D KIM322_05380 eutD; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D KIM322_05800 ackB; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:lxo00450]
D KIM322_14640 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KIM322_05110 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D KIM322_12700 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:lxo00460]
D KIM322_13510 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D KIM322_01240 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
C 00470 D-Amino acid metabolism [PATH:lxo00470]
D KIM322_12020 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KIM322_01400 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KIM322_14830 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D KIM322_14810 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D KIM322_00430 racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D KIM322_03510 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D KIM322_06580 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D KIM322_02270 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D KIM322_14540 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D KIM322_14520 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:lxo00480]
D KIM322_01560 pepN; aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D KIM322_15050 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D KIM322_10530 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:lxo00542]
D KIM322_05000 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:lxo00541]
D KIM322_04570 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D KIM322_02840 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D KIM322_05860 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D KIM322_12640 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D KIM322_04520 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:lxo00550]
D KIM322_12380 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KIM322_05410 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KIM322_10110 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D KIM322_06580 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D KIM322_02260 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KIM322_01400 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KIM322_12050 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D KIM322_08940 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D KIM322_10410 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KIM322_06570 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KIM322_06590 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D KIM322_07660 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KIM322_10240 pbpF; penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D KIM322_06560 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D KIM322_09820 penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D KIM322_10370 vanY; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KIM322_06170 UDP-N-acetylmuramyl peptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D KIM322_14070 cobQ; cobyric acid synthase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:lxo00552]
D KIM322_10410 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KIM322_05000 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KIM322_03380 tagA; acetylglucosaminyldiphosphoundecaprenol acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D KIM322_05490 tagE6; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D KIM322_14830 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D KIM322_14810 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D KIM322_14820 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D KIM322_14800 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D KIM322_12940 transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D KIM322_13170 lytR_1; transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D KIM322_03700 phosphoglycerol transferase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KIM322_05890 alkaline phosphatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D KIM322_03670 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D KIM322_03680 glycosyl transferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:lxo00543]
D KIM322_05000 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KIM322_01910 yijG; glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:lxo00730]
D KIM322_14060 thiD_1; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D KIM322_14120 thiD_2; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D KIM322_06420 nifS; aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_06720 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_06430 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D KIM322_14110 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D KIM322_14130 thiE; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D KIM322_05630 rsgA_1; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D KIM322_09460 rsgA_2; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D KIM322_09440 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D KIM322_11460 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D KIM322_14090 tenA; aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:lxo00740]
D KIM322_02330 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D KIM322_02310 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D KIM322_02340 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D KIM322_02320 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D KIM322_08820 ribC; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D KIM322_02030 oxidoreductase K22393 nfr1; flavin reductase (NADH) subunit 1 [EC:1.5.1.36]
D KIM322_02040 oxidoreductase K22394 nfr2; flavin reductase (NADH) subunit 2 [EC:1.5.1.36]
D KIM322_02850 NADPH-dependent oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D KIM322_14110 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D KIM322_06690 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:lxo00760]
D KIM322_03400 nadC; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D KIM322_09970 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D KIM322_03410 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D KIM322_01230 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D KIM322_04810 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D KIM322_02700 ssdh; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:lxo00770]
D KIM322_01760 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D KIM322_06890 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D KIM322_10080 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D KIM322_12030 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D KIM322_14730 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:lxo00780]
D KIM322_04890 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:lxo00790]
D KIM322_08540 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D KIM322_06450 folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D KIM322_02330 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
C 00670 One carbon pool by folate [PATH:lxo00670]
D KIM322_08540 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D KIM322_07590 fhs1; formate--tetrahydrofolate ligase 1 K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D KIM322_09610 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D KIM322_09500 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D KIM322_09800 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:lxo00130]
D KIM322_10420 hypothetical protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:lxo00900]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KIM322_04600 hmcS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D KIM322_04590 hmdH; hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D KIM322_07740 mvaK; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D KIM322_07760 phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D KIM322_07750 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D KIM322_07770 fni; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D KIM322_09580 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D KIM322_08940 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:lxo01054]
D KIM322_02270 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:lxo00946]
D KIM322_05930 alfa-L-rhamnosidase K05989 ramA; alpha-L-rhamnosidase [EC:3.2.1.40]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:lxo00311]
D KIM322_04350 pacB; penicillin acylase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D KIM322_02660 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:lxo00261]
D KIM322_14530 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D KIM322_14460 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D KIM322_14490 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D KIM322_14480 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:lxo00521]
D KIM322_05120 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D KIM322_01860 iolG; inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D KIM322_04890 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D KIM322_09370 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D KIM322_10460 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:lxo00362]
D KIM322_00400 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D KIM322_00490 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D KIM322_00590 pcaC; carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D KIM322_09890 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D KIM322_11220 hypothetical protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D KIM322_11220 hypothetical protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:lxo03020]
D KIM322_11760 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KIM322_11750 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KIM322_11420 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KIM322_09520 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D KIM322_12400 rpoE; putative DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:lxo03010]
D KIM322_07270 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D KIM322_09000 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D KIM322_11610 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D KIM322_06400 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D KIM322_11500 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D KIM322_00070 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D KIM322_11700 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D KIM322_11530 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D KIM322_11350 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D KIM322_11680 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D KIM322_11430 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D KIM322_11710 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D KIM322_11440 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D KIM322_11540 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D KIM322_06950 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D KIM322_09170 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D KIM322_11580 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D KIM322_00090 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D KIM322_11630 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D KIM322_06940 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D KIM322_08010 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D KIM322_10930 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D KIM322_11640 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D KIM322_11670 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D KIM322_11660 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D KIM322_11550 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D KIM322_11520 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D KIM322_10850 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D KIM322_00110 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D KIM322_10860 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D KIM322_10940 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D KIM322_11360 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D KIM322_11570 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D KIM322_11480 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D KIM322_11600 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D KIM322_11410 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D KIM322_11510 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D KIM322_09140 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D KIM322_10000 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D KIM322_09670 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D KIM322_11620 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D KIM322_11650 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D KIM322_11560 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D KIM322_09660 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D KIM322_09420 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D KIM322_11590 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D KIM322_11490 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D KIM322_12060 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D KIM322_07090 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D KIM322_09810 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D KIM322_15110 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D KIM322_10010 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
C 00970 Aminoacyl-tRNA biosynthesis [PATH:lxo00970]
D KIM322_t00450 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KIM322_t00240 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D KIM322_t00320 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D KIM322_t00540 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D KIM322_t00440 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KIM322_t00010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D KIM322_11020 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D KIM322_04320 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D KIM322_04330 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D KIM322_04310 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D KIM322_03430 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KIM322_08090 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KIM322_07690 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D KIM322_07950 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KIM322_07940 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KIM322_10040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KIM322_02760 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KIM322_11010 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KIM322_12700 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KIM322_09500 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D KIM322_06440 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KIM322_10400 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KIM322_06670 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KIM322_11870 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KIM322_10340 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KIM322_08910 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KIM322_08100 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KIM322_09860 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KIM322_09850 pheT_1; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KIM322_12920 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KIM322_12740 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:lxo03060]
D KIM322_11470 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KIM322_10960 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KIM322_03710 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KIM322_10540 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KIM322_09900 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KIM322_15090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KIM322_05050 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KIM322_09180 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KIM322_09270 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D KIM322_00350 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KIM322_07830 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KIM322_07580 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:lxo04122]
D KIM322_06420 nifS; aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_06720 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_06740 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D KIM322_06430 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:lxo03018]
D KIM322_08620 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KIM322_03720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D KIM322_12040 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D KIM322_04990 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D KIM322_06820 rnj_1; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KIM322_06960 rnj_2; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KIM322_02620 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KIM322_07130 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KIM322_08790 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D KIM322_10640 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:lxo03030]
D KIM322_02570 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_05400 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_07120 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KIM322_08900 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KIM322_10820 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KIM322_10760 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KIM322_06930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KIM322_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KIM322_00120 dnaB_1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D KIM322_07930 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D KIM322_00080 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KIM322_01300 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D KIM322_07370 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D KIM322_10100 polA; DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KIM322_04290 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:lxo03410]
D KIM322_07670 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D KIM322_05370 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D KIM322_01210 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D KIM322_10090 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D KIM322_13770 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D KIM322_00690 exoA; exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D KIM322_10100 polA; DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KIM322_08760 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KIM322_04290 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:lxo03420]
D KIM322_11970 trcF; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D KIM322_05140 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D KIM322_14750 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D KIM322_05130 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D KIM322_07030 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D KIM322_01740 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KIM322_04280 pcrA; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KIM322_10100 polA; DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KIM322_04290 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:lxo03430]
D KIM322_10580 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D KIM322_03470 mutS2; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D KIM322_10570 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D KIM322_01740 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KIM322_04280 pcrA; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KIM322_09600 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D KIM322_09590 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D KIM322_08760 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KIM322_00080 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KIM322_07120 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KIM322_08900 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KIM322_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KIM322_10820 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KIM322_06930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KIM322_10760 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KIM322_02570 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_05400 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_04290 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D KIM322_04380 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KIM322_04390 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:lxo03440]
D KIM322_08760 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KIM322_00080 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KIM322_00040 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D KIM322_07960 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D KIM322_10800 recR; recombination protein RecR K06187 recR; recombination protein RecR
D KIM322_04980 recA; protein RecA K03553 recA; recombination protein RecA
D KIM322_10100 polA; DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KIM322_10560 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D KIM322_10550 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D KIM322_09390 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D KIM322_06770 recD2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D KIM322_07120 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KIM322_08900 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KIM322_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KIM322_10820 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KIM322_06930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KIM322_10760 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KIM322_02570 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_05400 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_09510 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:lxo02010]
D KIM322_02220 choS; glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D KIM322_04950 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D KIM322_04940 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D KIM322_04970 opuD; amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D KIM322_02230 choQ; ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D KIM322_04930 hypothetical protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D KIM322_02590 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D KIM322_12850 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D KIM322_12830 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D KIM322_12820 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D KIM322_12840 sugar ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D KIM322_10920 ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D KIM322_10910 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D KIM322_10900 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D KIM322_10880 pstB2; phosphate import ATP-binding protein PstB 2 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D KIM322_10890 pstB1; phosphate import ATP-binding protein PstB 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D KIM322_03030 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KIM322_13810 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KIM322_13830 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KIM322_13780 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KIM322_13790 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KIM322_13800 phnC; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D KIM322_04080 glnH1_1; glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D KIM322_10030 glnH1_2; glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D KIM322_04090 glnM; glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D KIM322_04100 glnP1; glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D KIM322_04070 glnQ; arginine ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D KIM322_13240 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D KIM322_13230 ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D KIM322_01200 amino acid ABC transporter substrate-binding protein K17073 lysX1; putative lysine transport system substrate-binding protein
D KIM322_01190 peptide ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D KIM322_01660 livA; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D KIM322_01670 livB; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D KIM322_01680 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D KIM322_01690 livD; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D KIM322_01700 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D KIM322_08530 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D KIM322_08510 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D KIM322_08520 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D KIM322_04130 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D KIM322_04140 oppB_1; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D KIM322_04150 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D KIM322_04160 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D KIM322_04170 oppF_1; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D KIM322_01030 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D KIM322_11380 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D KIM322_11400 ecfA1; energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KIM322_11390 ecfA2; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KIM322_09060 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KIM322_09050 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KIM322_04260 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D KIM322_02200 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KIM322_02210 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KIM322_14590 ABC transporter ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:lxo02060]
D KIM322_04740 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D KIM322_04730 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D KIM322_04440 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D KIM322_01010 hypothetical protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D KIM322_14100 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D KIM322_02370 pts2A; PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D KIM322_02360 mtlA; PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D KIM322_03930 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KIM322_03920 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KIM322_00310 pts6C; permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_03960 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_04500 ptcC; permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_05960 ywbA; putative permease IIC component YwbA K02761 celB; cellobiose PTS system EIIC component
D KIM322_11190 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_12620 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_14770 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KIM322_03120 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KIM322_03900 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KIM322_02770 manL; PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D KIM322_02780 manM; PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_03100 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_03270 PTS sugar transporter K02795 manY; mannose PTS system EIIC component
D KIM322_12310 manY2; PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_02790 manN; PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D KIM322_03110 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D KIM322_12300 manZ2; PTS trehalose transporter subunit IIBC K02796 manZ; mannose PTS system EIID component
D KIM322_03250 PTS fructose transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D KIM322_03260 PTS sorbose transporter subunit IIC K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D KIM322_03850 PTS sugar transporter K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D KIM322_03860 PTS sugar transporter K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D KIM322_03280 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D KIM322_03870 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D KIM322_12280 PTS fructose transporter subunit IIA K11194 levD; fructose PTS system EIIA component [EC:2.7.1.202]
D KIM322_04840 pthA; PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D KIM322_14390 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D KIM322_14380 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component
D KIM322_13340 fruA; PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D KIM322_13350 fruK; tagatose-6-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:lxo03070]
D KIM322_10960 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KIM322_03710 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KIM322_11470 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KIM322_10540 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KIM322_09900 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KIM322_15090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KIM322_05050 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KIM322_09270 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D KIM322_09180 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:lxo02020]
D KIM322_10920 ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D KIM322_00970 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D KIM322_00930 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D KIM322_00920 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D KIM322_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KIM322_14830 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D KIM322_14820 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D KIM322_14810 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D KIM322_14800 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D KIM322_09910 lisK; two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D KIM322_09920 lisR; DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D KIM322_08200 citC; [Citrate [pro-3S]-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D KIM322_08190 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D KIM322_08180 citE; citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D KIM322_08170 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D KIM322_08160 citX; holo-ACP synthase CitX K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D KIM322_00720 citG; putative 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D KIM322_13330 lytS; sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D KIM322_13320 lytR_2; sensory transduction protein LytR K07705 lytT; two-component system, LytTR family, response regulator LytT
D KIM322_13310 murein hydrolase transporter LrgA K05338 lrgA; holin-like protein
D KIM322_13300 antiholin K05339 lrgB; holin-like protein LrgB
D KIM322_09740 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KIM322_02440 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D KIM322_04520 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:lxo02024]
D KIM322_01660 livA; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D KIM322_01670 livB; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D KIM322_01680 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D KIM322_01690 livD; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D KIM322_01700 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D KIM322_02310 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D KIM322_04130 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D KIM322_04140 oppB_1; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D KIM322_04150 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D KIM322_04160 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D KIM322_04170 oppF_1; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D KIM322_09300 oppA_1; peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KIM322_09310 oppA_2; peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KIM322_09320 oppA_3; peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KIM322_10280 oppA_4; peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KIM322_09340 oppB_2; peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D KIM322_09330 oppC; peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D KIM322_09360 oppD; dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D KIM322_09350 oppF_2; peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D KIM322_03150 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D KIM322_09900 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KIM322_15090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KIM322_10960 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KIM322_03710 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KIM322_11470 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KIM322_10540 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KIM322_05050 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KIM322_09270 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D KIM322_09180 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:lxo02040]
D KIM322_07920 rpoD; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D KIM322_02440 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D KIM322_08620 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:lxo01501]
D KIM322_05940 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D KIM322_04130 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D KIM322_04140 oppB_1; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D KIM322_04150 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D KIM322_04160 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D KIM322_04170 oppF_1; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D KIM322_02660 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D KIM322_04260 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D KIM322_07660 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KIM322_10240 pbpF; penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:lxo01502]
D KIM322_01400 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KIM322_12020 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KIM322_12050 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D KIM322_06570 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KIM322_06590 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:lxo01503]
D KIM322_00970 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D KIM322_14830 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D KIM322_14820 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D KIM322_14810 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D KIM322_14800 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:lxo01000]
C 01001 Protein kinases [BR:lxo01001]
D KIM322_09470 serine/threonine protein kinase K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D KIM322_00930 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D KIM322_09910 lisK; two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D KIM322_13330 lytS; sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:lxo01009]
D KIM322_07130 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KIM322_09480 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:lxo01002]
D KIM322_07580 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D KIM322_11060 aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D KIM322_12800 pepE; aminopeptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D KIM322_10590 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D KIM322_12190 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D KIM322_14580 gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 K07010; putative glutamine amidotransferase
D KIM322_13020 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D KIM322_05450 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D KIM322_13740 asnH; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D KIM322_11230 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D KIM322_04350 pacB; penicillin acylase K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D KIM322_14010 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
D KIM322_09260 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D KIM322_12250 dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D KIM322_14880 membrane protein K07052 K07052; CAAX protease family protein
D KIM322_01560 pepN; aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D KIM322_13200 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D KIM322_13710 pepO; peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D KIM322_13220 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D KIM322_07880 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D KIM322_14500 N-acetyldiaminopimelate deacetylase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D KIM322_04550 ampM; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D KIM322_09650 pepP; X-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D KIM322_11920 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D KIM322_01060 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D KIM322_08920 zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D KIM322_14020 aminopeptidase K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D KIM322_00970 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D KIM322_10370 vanY; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KIM322_05200 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D KIM322_09730 pepX; Xaa-Pro dipeptidyl-peptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D KIM322_06900 peptide-binding protein K07177 K07177; Lon-like protease
D KIM322_09090 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D KIM322_00350 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KIM322_07830 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D KIM322_02530 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D KIM322_10270 proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D KIM322_00360 peptidase S51 K05995 pepE; dipeptidase E [EC:3.4.13.21]
D KIM322_09790 rhomboid family intramembrane serine protease K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D KIM322_07420 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
C 01003 Glycosyltransferases [BR:lxo01003]
D KIM322_03670 glycosyl transferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D KIM322_03680 glycosyl transferase K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D KIM322_07660 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KIM322_10240 pbpF; penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D KIM322_03380 tagA; acetylglucosaminyldiphosphoundecaprenol acetyl-beta-D-mannosaminyltransferase K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D KIM322_05490 tagE6; poly(glycerol-phosphate) alpha-glucosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D KIM322_05000 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D KIM322_01910 yijG; glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:lxo01005]
D KIM322_05000 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:lxo01011]
D KIM322_12380 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D KIM322_05410 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D KIM322_10110 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D KIM322_06580 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D KIM322_02260 murE; UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D KIM322_01400 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D KIM322_12020 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D KIM322_03510 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D KIM322_06570 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D KIM322_06590 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D KIM322_10410 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D KIM322_07660 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D KIM322_10240 pbpF; penicillin-binding protein K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D KIM322_06560 penicillin-binding protein K08724 pbpB; penicillin-binding protein 2B
D KIM322_09820 penicillin-binding protein K21465 pbpA; penicillin-binding protein A
D KIM322_10370 vanY; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D KIM322_13020 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D KIM322_14010 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70]
C 01004 Lipid biosynthesis proteins [BR:lxo01004]
D KIM322_04890 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D KIM322_09380 plsX; phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D KIM322_07450 plsY2; glycerol-3-phosphate acyltransferase 2 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D KIM322_09020 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:lxo01008]
D KIM322_02270 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:lxo01006]
D KIM322_09580 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D KIM322_08940 uppS; isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D KIM322_09760 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:lxo01007]
D KIM322_11020 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D KIM322_12920 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KIM322_12740 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KIM322_11010 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KIM322_10340 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KIM322_12700 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KIM322_06670 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KIM322_06440 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KIM322_10400 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KIM322_11870 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KIM322_08090 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KIM322_07690 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D KIM322_08100 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KIM322_07950 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KIM322_07940 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KIM322_02760 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KIM322_08910 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KIM322_10040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KIM322_03430 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KIM322_09860 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KIM322_09850 pheT_1; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KIM322_03340 araT; aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D KIM322_08060 aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D KIM322_14470 aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D KIM322_14640 plastocyanin K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D KIM322_14730 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:lxo00194]
D KIM322_06300 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D KIM322_06290 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D KIM322_06280 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D KIM322_06270 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D KIM322_06260 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D KIM322_06250 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D KIM322_06240 ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D KIM322_06230 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:lxo03000]
D KIM322_03040 lacR; DeoR family transcriptional regulator K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D KIM322_12110 DeoR family regulatory proteins K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D KIM322_13360 fruR; DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D KIM322_04020 transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D KIM322_03570 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D KIM322_00990 scrR; LacI family transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D KIM322_11210 gntR_5; transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D KIM322_03300 GntR family transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D KIM322_04210 yurK; putative HTH-type transcriptional regulator YurK K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator
D KIM322_00840 gntR_1; transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D KIM322_03070 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D KIM322_03360 gntR_2; transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D KIM322_03230 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D KIM322_00520 MerR family transcriptional regulator K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D KIM322_05220 fur; transcriptional repressor K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D KIM322_11280 transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D KIM322_00890 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D KIM322_12650 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D KIM322_12320 transcription antiterminator BglG K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
D KIM322_12420 hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D KIM322_10660 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D KIM322_14000 bglG5; transcription antitermination protein BlgG K03488 licT; beta-glucoside operon transcriptional antiterminator
D KIM322_02390 transcriptional regulator K03483 mtlR; mannitol operon transcriptional activator
D KIM322_02140 parB_1; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KIM322_02160 parB_2; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KIM322_08810 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D KIM322_14090 tenA; aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D KIM322_10380 hypothetical protein K03973 pspC; phage shock protein C
D KIM322_05270 transcriptional regulator K05311 cggR; central glycolytic genes regulator
D KIM322_10070 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D KIM322_06530 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:lxo03021]
D KIM322_11420 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KIM322_11760 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KIM322_11750 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KIM322_12400 rpoE; putative DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D KIM322_09520 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D KIM322_07920 rpoD; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D KIM322_10980 DNA-directed RNA polymerase subunit sigma K27000 sigH; RNA polymerase sigma-H factor
D KIM322_02440 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D KIM322_08880 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D KIM322_09620 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D KIM322_10950 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D KIM322_09840 greA_1; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D KIM322_12780 greA_2; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:lxo03019]
D KIM322_09290 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KIM322_06820 rnj_1; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KIM322_06960 rnj_2; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KIM322_02620 MBL fold metallo-hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D KIM322_04990 rny; ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D KIM322_03720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D KIM322_10200 3'-5' exoribonuclease YhaM K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D KIM322_12040 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D KIM322_10500 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D KIM322_08620 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KIM322_07130 pfkA; ATP-dependent 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D KIM322_08790 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D KIM322_10640 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KIM322_05160 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:lxo03011]
D KIM322_07270 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D KIM322_09000 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D KIM322_11610 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D KIM322_06400 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D KIM322_11500 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D KIM322_00070 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D KIM322_11700 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D KIM322_11530 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D KIM322_11350 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D KIM322_11680 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D KIM322_11430 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D KIM322_11710 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D KIM322_11440 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D KIM322_11540 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D KIM322_06950 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D KIM322_09170 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D KIM322_11580 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D KIM322_00090 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D KIM322_11630 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D KIM322_06940 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D KIM322_08010 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D KIM322_10930 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D KIM322_11640 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D KIM322_11670 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D KIM322_11660 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D KIM322_11550 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D KIM322_11520 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D KIM322_00110 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D KIM322_10860 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D KIM322_10940 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D KIM322_10850 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D KIM322_11360 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D KIM322_11570 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D KIM322_11480 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D KIM322_11600 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D KIM322_11410 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D KIM322_11510 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D KIM322_09140 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D KIM322_10000 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D KIM322_09670 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D KIM322_11620 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D KIM322_11650 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D KIM322_11560 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D KIM322_09660 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D KIM322_09420 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D KIM322_11590 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D KIM322_11490 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D KIM322_12060 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D KIM322_07090 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D KIM322_09810 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D KIM322_15110 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D KIM322_10010 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
C 03009 Ribosome biogenesis [BR:lxo03009]
D KIM322_09290 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KIM322_07970 era; GTPase Era K03595 era; GTPase
D KIM322_07040 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D KIM322_08880 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D KIM322_09620 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D KIM322_10950 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D KIM322_12670 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D KIM322_09490 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D KIM322_02130 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D KIM322_06540 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D KIM322_10740 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D KIM322_09570 TlyA family rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D KIM322_10990 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D KIM322_00980 rlmH; ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D KIM322_04370 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D KIM322_07230 rluB; pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D KIM322_04820 rluD; RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D KIM322_07570 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D KIM322_10250 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D KIM322_10700 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D KIM322_14610 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D KIM322_02830 ribosomal protein acetylating enzyme K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D KIM322_09160 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D KIM322_00210 hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D KIM322_08130 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D KIM322_03450 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D KIM322_11000 mrnC; mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D KIM322_12040 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D KIM322_10500 DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D KIM322_05630 rsgA_1; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D KIM322_09460 rsgA_2; putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D KIM322_07280 der; GTPase Der K03977 engA; GTPase
D KIM322_07360 ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A
D KIM322_13010 hflX; GTPase HflX K03665 hflX; GTPase
D KIM322_09980 ribosome biogenesis GTPase YqeH K06948 yqeH; 30S ribosome assembly GTPase
D KIM322_06210 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D KIM322_08120 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D KIM322_08840 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D KIM322_08890 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D KIM322_00030 RNA-binding protein K14761 rlbA; ribosome-associated protein
D KIM322_09950 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D KIM322_07980 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D KIM322_05040 yvyD; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D KIM322_02180 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D KIM322_09930 DNA-binding protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:lxo03016]
D KIM322_07060 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D KIM322_07320 cca; CCA-adding enzyme K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D KIM322_08910 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D KIM322_06670 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D KIM322_10400 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KIM322_12700 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D KIM322_10340 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KIM322_11870 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D KIM322_08090 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KIM322_03430 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D KIM322_07690 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D KIM322_10040 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D KIM322_02760 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D KIM322_11010 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D KIM322_06440 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D KIM322_08100 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D KIM322_09860 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D KIM322_09850 pheT_1; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D KIM322_12920 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KIM322_12740 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D KIM322_08110 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D KIM322_10170 diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D KIM322_10140 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D KIM322_11370 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D KIM322_08830 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D KIM322_06420 nifS; aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_06720 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_06210 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D KIM322_09760 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D KIM322_15080 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D KIM322_15070 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D KIM322_15100 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D KIM322_07950 glyQ; glycine--tRNA ligase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D KIM322_07940 glyS; glycine--tRNA ligase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D KIM322_11020 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D KIM322_08140 Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D KIM322_10830 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D KIM322_11880 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D KIM322_07400 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D KIM322_09150 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D KIM322_07900 methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D KIM322_04860 putative tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D KIM322_09880 rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D KIM322_06740 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D KIM322_06430 thiI; putative tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D KIM322_11930 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D KIM322_10710 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D KIM322_10690 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D KIM322_05390 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D KIM322_09940 UPF0348 protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D KIM322_03720 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:lxo03012]
D KIM322_08850 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D KIM322_10020 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D KIM322_10670 ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D KIM322_08990 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D KIM322_06980 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KIM322_11690 fusA; elongation factor G K02355 fusA; elongation factor G
D KIM322_06190 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D KIM322_08950 ribosome-recycling factor K02838 frr; ribosome recycling factor
D KIM322_06200 hemK; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D KIM322_11980 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D KIM322_11450 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D KIM322_01770 efp1; elongation factor P 1 K02356 efp; elongation factor P
D KIM322_09640 efp2; elongation factor P 2 K02356 efp; elongation factor P
D KIM322_05060 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D KIM322_04690 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:lxo03110]
D KIM322_11770 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D KIM322_04710 clpE_1; ATP-dependent Clp protease ClpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D KIM322_14740 clpE_2; ATP-dependent Clp protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D KIM322_07000 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D KIM322_07430 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D KIM322_08790 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D KIM322_10640 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KIM322_08780 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D KIM322_11910 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D KIM322_08800 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D KIM322_12790 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D KIM322_10650 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D KIM322_00970 htrA; serine protease K04771 degP; serine protease Do [EC:3.4.21.107]
D KIM322_11920 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D KIM322_06230 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D KIM322_10190 prtM; foldase protein PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D KIM322_03480 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:lxo04131]
D KIM322_05280 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KIM322_14140 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KIM322_11110 gpmA_1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_13540 gpmA_2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_07140 kpyK; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:lxo03032]
D KIM322_01300 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D KIM322_07290 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D KIM322_08500 hbsU; DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KIM322_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KIM322_00120 dnaB_1; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D KIM322_07930 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D KIM322_10060 dnaB_2; chromosome replication initiation K03346 dnaB; replication initiation and membrane attachment protein
D KIM322_10050 dnaI; primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D KIM322_00080 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KIM322_07120 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KIM322_08900 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KIM322_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KIM322_06930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KIM322_10760 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KIM322_02570 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_05400 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_10820 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KIM322_07370 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D KIM322_10100 polA; DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KIM322_04290 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D KIM322_04380 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KIM322_04390 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KIM322_00060 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D KIM322_00050 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D KIM322_07470 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KIM322_07460 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KIM322_07390 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:lxo03036]
D KIM322_09290 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D KIM322_07290 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D KIM322_08500 hbsU; DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KIM322_00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D KIM322_03970 dps1; DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D KIM322_09280 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein
D KIM322_07210 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D KIM322_07220 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D KIM322_06610 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D KIM322_11950 septation inhibitor protein K13052 divIC; cell division protein DivIC
D KIM322_04880 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D KIM322_06550 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D KIM322_06600 ftsQ; cell division protein DivIB K03589 ftsQ; cell division protein FtsQ
D KIM322_06860 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D KIM322_06620 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KIM322_06410 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D KIM322_06660 cell division protein DivIVA K04074 divIVA; cell division initiation protein
D KIM322_06630 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D KIM322_06320 mreB_1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KIM322_06480 mreB_2; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KIM322_06490 mreC; cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D KIM322_06500 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D KIM322_06350 rodA; cell division protein FtsW K05837 rodA; rod shape determining protein RodA
D KIM322_02150 parA; sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D KIM322_02140 parB_1; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KIM322_02160 parB_2; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KIM322_07470 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KIM322_07460 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KIM322_15070 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D KIM322_02130 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D KIM322_07400 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D KIM322_07410 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D KIM322_07190 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D KIM322_07010 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
D KIM322_05180 whiA; putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:lxo03400]
D KIM322_12860 ogt; 6-O-methylguanine DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D KIM322_05370 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D KIM322_01210 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D KIM322_07670 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D KIM322_07910 mutT_2; 7,8-dihydro-8-oxoguanine triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D KIM322_11040 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D KIM322_13770 3-methyladenine DNA glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D KIM322_10090 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D KIM322_00690 exoA; exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D KIM322_08760 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D KIM322_04290 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D KIM322_10100 polA; DNA polymerase K02335 polA; DNA polymerase I [EC:2.7.7.7]
D KIM322_05140 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D KIM322_14750 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D KIM322_05130 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D KIM322_07030 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D KIM322_01740 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KIM322_04280 pcrA; DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D KIM322_11760 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D KIM322_11750 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D KIM322_11420 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D KIM322_12400 rpoE; putative DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D KIM322_09520 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D KIM322_11970 trcF; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D KIM322_10580 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D KIM322_03470 mutS2; endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D KIM322_10570 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D KIM322_09600 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D KIM322_09590 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D KIM322_07120 DNA-directed DNA polymerase K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D KIM322_08900 polC; DNA polymerase III PolC-type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D KIM322_00020 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D KIM322_06930 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D KIM322_10760 DNA polymerase III subunit delta K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D KIM322_02570 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_05400 exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D KIM322_10820 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D KIM322_00080 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KIM322_04380 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KIM322_04390 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KIM322_06770 recD2; ATP-dependent RecD-like DNA helicase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D KIM322_04980 recA; protein RecA K03553 recA; recombination protein RecA
D KIM322_10560 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D KIM322_10550 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D KIM322_09510 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D KIM322_11030 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D KIM322_00040 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D KIM322_09390 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D KIM322_07960 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D KIM322_10800 recR; recombination protein RecR K06187 recR; recombination protein RecR
D KIM322_09560 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D KIM322_07650 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D KIM322_07720 addA; ATP-dependent helicase/nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D KIM322_07730 rexB; ATP-dependent helicase/deoxyribonuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D KIM322_08360 cas1_2; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D KIM322_00060 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D KIM322_00050 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D KIM322_07390 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D KIM322_07290 transcriptional regulator K03530 hupB; DNA-binding protein HU-beta
D KIM322_08500 hbsU; DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D KIM322_10520 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D KIM322_12770 type VI secretion protein ImpB K03502 umuC; DNA polymerase V
D KIM322_09090 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D KIM322_04650 recX; regulatory protein RecX K03565 recX; regulatory protein
D KIM322_07710 dinG; ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D KIM322_10510 oligoribonuclease K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:lxo03029]
D KIM322_08850 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D KIM322_10020 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D KIM322_08990 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D KIM322_06980 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KIM322_11690 fusA; elongation factor G K02355 fusA; elongation factor G
D KIM322_07970 era; GTPase Era K03595 era; GTPase
D KIM322_12920 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D KIM322_10400 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D KIM322_08090 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D KIM322_10340 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D KIM322_04320 gatA; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D KIM322_04330 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D KIM322_04310 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D KIM322_00080 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D KIM322_08790 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D KIM322_08800 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE
D KIM322_10640 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KIM322_10650 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D KIM322_08780 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D KIM322_06420 nifS; aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_06720 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_09900 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KIM322_15090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:lxo02000]
D KIM322_09060 ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KIM322_09050 multidrug ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KIM322_04260 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D KIM322_02200 ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D KIM322_02210 ABC transporter K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D KIM322_14590 ABC transporter ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D KIM322_02220 choS; glycine/betaine ABC transporter permease K05845 opuC; osmoprotectant transport system substrate-binding protein
D KIM322_04950 osmoprotectant ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D KIM322_04940 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D KIM322_04970 opuD; amino acid ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein
D KIM322_02230 choQ; ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D KIM322_04930 hypothetical protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D KIM322_02590 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D KIM322_12850 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D KIM322_12830 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D KIM322_12820 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D KIM322_12840 sugar ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D KIM322_02630 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D KIM322_02640 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D KIM322_02600 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D KIM322_02610 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D KIM322_10920 ABC transporter K02040 pstS; phosphate transport system substrate-binding protein
D KIM322_10910 phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein
D KIM322_10900 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D KIM322_10880 pstB2; phosphate import ATP-binding protein PstB 2 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D KIM322_10890 pstB1; phosphate import ATP-binding protein PstB 1 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D KIM322_03030 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KIM322_13810 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KIM322_13830 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D KIM322_13780 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KIM322_13790 phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D KIM322_13800 phnC; phosphonates import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D KIM322_04080 glnH1_1; glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D KIM322_10030 glnH1_2; glutamine ABC transporter substrate-binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D KIM322_04090 glnM; glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D KIM322_04100 glnP1; glutamine ABC transporter permease K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D KIM322_04070 glnQ; arginine ABC transporter ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D KIM322_13240 ABC transporter permease K17077 artQ; arginine/lysine/histidine transport system permease protein
D KIM322_13230 ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D KIM322_01660 livA; branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D KIM322_01670 livB; branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D KIM322_01680 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D KIM322_01690 livD; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D KIM322_01700 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D KIM322_08530 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D KIM322_08510 methionine ABC transporter permease K02072 metI; D-methionine transport system permease protein
D KIM322_08520 metN; methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D KIM322_02420 ABC transporter ATP-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D KIM322_02430 ABC transporter ATP-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D KIM322_02410 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D KIM322_02400 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D KIM322_01200 amino acid ABC transporter substrate-binding protein K17073 lysX1; putative lysine transport system substrate-binding protein
D KIM322_01190 peptide ABC transporter ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D KIM322_01470 glutamine ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D KIM322_01490 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D KIM322_01480 polar amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D KIM322_04130 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D KIM322_04140 oppB_1; peptide ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D KIM322_04150 peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D KIM322_04160 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D KIM322_04170 oppF_1; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D KIM322_09300 oppA_1; peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KIM322_09310 oppA_2; peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KIM322_09320 oppA_3; peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KIM322_10280 oppA_4; peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D KIM322_09340 oppB_2; peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D KIM322_09330 oppC; peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D KIM322_09360 oppD; dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D KIM322_09350 oppF_2; peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D KIM322_01030 ABC transporter permease K16785 ecfT; energy-coupling factor transport system permease protein
D KIM322_11380 ecfT; energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D KIM322_11400 ecfA1; energy-coupling factor transporter ATP-binding protein EcfA1 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KIM322_11390 ecfA2; energy-coupling factor transporter ATP-binding protein EcfA2 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KIM322_01040 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D KIM322_03780 membrane protein K16925 ykoE; energy-coupling factor transport system permease protein
D KIM322_13260 ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D KIM322_13270 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D KIM322_09210 hypothetical protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D KIM322_09220 hypothetical protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D KIM322_09230 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D KIM322_00190 hypothetical protein K25154 evrC; viologen exporter family transport system permease protein
D KIM322_00480 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D KIM322_06160 ABC transporter permease K25154 evrC; viologen exporter family transport system permease protein
D KIM322_00180 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein
D KIM322_00470 ABC transporter permease K25155 evrB; viologen exporter family transport system permease protein
D KIM322_06150 hypothetical protein K25155 evrB; viologen exporter family transport system permease protein
D KIM322_00170 ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D KIM322_00460 peptide ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D KIM322_06140 multidrug ABC transporter ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D KIM322_10150 ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D KIM322_10160 ABC transporter ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D KIM322_00450 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KIM322_03790 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D KIM322_03810 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D KIM322_04190 antibiotic ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D KIM322_00440 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KIM322_03000 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KIM322_03800 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KIM322_04200 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KIM322_05620 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KIM322_07860 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KIM322_11160 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D KIM322_01640 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KIM322_01650 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KIM322_01990 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KIM322_05660 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D KIM322_14900 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KIM322_00240 yabE_1; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KIM322_00560 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KIM322_01630 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KIM322_02000 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KIM322_05670 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KIM322_11830 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KIM322_15170 yabE_2; ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D KIM322_01790 iolT2; MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D KIM322_01800 iolT1; MFS transporter K06609 iolT; MFS transporter, SP family, major inositol transporter
D KIM322_13910 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D KIM322_02510 lmrB; MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D KIM322_04740 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D KIM322_04730 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D KIM322_04440 hypothetical protein K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D KIM322_01010 hypothetical protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D KIM322_14100 PTS beta-glucoside transporter subunit EIIBCA K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D KIM322_13340 fruA; PTS fructose transporter subunit IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D KIM322_02370 pts2A; PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D KIM322_02360 mtlA; PTS mannitol transporter subunit IICB K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D KIM322_03930 PTS cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D KIM322_03920 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D KIM322_00310 pts6C; permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_03960 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_04500 ptcC; permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_05960 ywbA; putative permease IIC component YwbA K02761 celB; cellobiose PTS system EIIC component
D KIM322_11190 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_12620 permease IIC component K02761 celB; cellobiose PTS system EIIC component
D KIM322_14770 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component
D KIM322_04840 pthA; PTS sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D KIM322_02770 manL; PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D KIM322_03120 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KIM322_03900 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D KIM322_02780 manM; PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_03100 PTS fructose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_03270 PTS sugar transporter K02795 manY; mannose PTS system EIIC component
D KIM322_12310 manY2; PTS sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component
D KIM322_02790 manN; PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D KIM322_03110 PTS fructose transporter subunit IID K02796 manZ; mannose PTS system EIID component
D KIM322_12300 manZ2; PTS trehalose transporter subunit IIBC K02796 manZ; mannose PTS system EIID component
D KIM322_03250 PTS fructose transporter subunit IIA K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D KIM322_03260 PTS sorbose transporter subunit IIC K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D KIM322_03850 PTS sugar transporter K19507 gfrB; fructoselysine/glucoselysine PTS system EIIB component [EC:2.7.1.-]
D KIM322_03860 PTS sugar transporter K19508 gfrC; fructoselysine/glucoselysine PTS system EIIC component
D KIM322_03280 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D KIM322_03870 PTS mannose transporter subunit IID K19509 gfrD; fructoselysine/glucoselysine PTS system EIID component
D KIM322_12280 PTS fructose transporter subunit IIA K11194 levD; fructose PTS system EIIA component [EC:2.7.1.202]
D KIM322_14390 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D KIM322_14380 PTS beta-glucoside transporter subunit IIBC K03475 ulaA; ascorbate PTS system EIIC component
D KIM322_08470 glpF3; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D KIM322_03490 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D KIM322_03530 mechanosensitive ion channel protein MscS K22044 ybiO; moderate conductance mechanosensitive channel
D KIM322_03750 transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D KIM322_04680 hemolysin transporter protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D KIM322_13310 murein hydrolase transporter LrgA K05338 lrgA; holin-like protein
D KIM322_12440 arcD1; amino acid APC transporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D KIM322_11130 cobalt transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D KIM322_13690 glcA; L-lactate permease K03303 lutP; lactate permease
D KIM322_08570 napA3; sodium:proton antiporter K26730 napA; Na+:H+ antiporter
D KIM322_12980 cytosine permease K10974 codB; cytosine permease
D KIM322_12220 xanthine permease K16169 pbuX; xanthine permease
D KIM322_14980 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D KIM322_15000 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D KIM322_04050 nucleoside permease K11535 nupC; nucleoside transport protein
D KIM322_13680 kup2; putative potassium transport system protein kup 2 K03549 kup; KUP system potassium uptake protein
D KIM322_07240 riboflavin transporter K23675 fmnP; riboflavin transporter
D KIM322_06860 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D KIM322_08560 hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter
D KIM322_00150 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:lxo02044]
D KIM322_06640 ytdD; hypothetical protein K02221 yggT; YggT family protein
D KIM322_06910 competence protein K02237 comEA; competence protein ComEA
D KIM322_12730 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D KIM322_06920 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D KIM322_05020 DNA/RNA helicase K02240 comFA; competence protein ComFA
D KIM322_05030 hypothetical protein K02242 comFC; competence protein ComFC
D KIM322_05730 cglA; competence protein K02243 comGA; competence protein ComGA
D KIM322_05740 type II secretion system protein F K02244 comGB; competence protein ComGB
D KIM322_05750 competence protein ComGC K02245 comGC; competence protein ComGC
D KIM322_05760 hypothetical protein K02246 comGD; competence protein ComGD
D KIM322_05780 hypothetical protein K02248 comGF; competence protein ComGF
D KIM322_11730 prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D KIM322_05050 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D KIM322_10960 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D KIM322_03710 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D KIM322_11470 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D KIM322_09180 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D KIM322_09270 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D KIM322_10540 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D KIM322_09900 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D KIM322_15090 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:lxo02042]
D KIM322_03750 transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D KIM322_04680 hemolysin transporter protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D KIM322_07330 hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:lxo02022]
D KIM322_00930 PAS domain-containing sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D KIM322_00920 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D KIM322_09910 lisK; two-component sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D KIM322_09920 lisR; DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D KIM322_13330 lytS; sensor protein LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D KIM322_13320 lytR_2; sensory transduction protein LytR K07705 lytT; two-component system, LytTR family, response regulator LytT
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:lxo04812]
D KIM322_06320 mreB_1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KIM322_06480 mreB_2; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KIM322_06620 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KIM322_06610 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D KIM322_02150 parA; sporulation initiation inhibitor Soj K03496 parA; chromosome partitioning protein
D KIM322_02140 parB_1; nucleoid occlusion protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D KIM322_02160 parB_2; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:lxo04147]
D KIM322_08620 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D KIM322_05280 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KIM322_14140 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D KIM322_05290 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D KIM322_07140 kpyK; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D KIM322_10640 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D KIM322_08790 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D KIM322_05910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D KIM322_05520 guanosine monophosphate reductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D KIM322_06980 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D KIM322_10170 diadenosine tetraphosphate hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D KIM322_02460 hicD2; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_08240 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D KIM322_04580 thil; 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D KIM322_11460 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D KIM322_08750 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D KIM322_11090 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D KIM322_05840 glpK1; glycerol kinase 1 K00864 glpK; glycerol kinase [EC:2.7.1.30]
D KIM322_14050 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D KIM322_09740 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D KIM322_10530 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D KIM322_05300 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D KIM322_11110 gpmA_1; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D KIM322_13540 gpmA_2; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:lxo02048]
D KIM322_08360 cas1_2; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D KIM322_02490 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D KIM322_08420 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D KIM322_08400 type I-E CRISPR-associated protein Cse2/CasB K19046 casB; CRISPR system Cascade subunit CasB
D KIM322_08390 type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC
D KIM322_08380 type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD
D KIM322_08370 type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE
D KIM322_02470 cas9; CRISPR-associated endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D KIM322_04380 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KIM322_04390 hypothetical protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D KIM322_05790 restriction endonuclease subunit M K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D KIM322_14710 mazF; mRNA-degrading endonuclease K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D KIM322_10380 hypothetical protein K03973 pspC; phage shock protein C
D KIM322_06620 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D KIM322_06320 mreB_1; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KIM322_06480 mreB_2; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D KIM322_07470 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D KIM322_07460 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D KIM322_06420 nifS; aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D KIM322_06720 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:lxo01504]
D KIM322_14590 ABC transporter ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D KIM322_02660 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D KIM322_14830 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D KIM322_14820 dltB; D-alanyl-lipoteichoic acid biosynthesis protein DltB K03739 dltB; membrane protein involved in D-alanine export
D KIM322_14810 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D KIM322_14800 dltD; D-alanyl-lipoteichoic acid biosynthesis protein DltD K03740 dltD; D-alanine transfer protein
D KIM322_04260 ABC transporter ATP-binding protein K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:lxo03100]
D KIM322_t00450 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D KIM322_t00240 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D KIM322_t00320 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D KIM322_t00540 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D KIM322_t00440 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D KIM322_t00010 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D KIM322_05540 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D KIM322_05550 2,5-diketo-D-gluconic acid reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D KIM322_12120 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D KIM322_13250 lox; L-lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D KIM322_05710 oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D KIM322_08030 msrA_1; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D KIM322_08050 msrA_2; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D KIM322_08210 hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D KIM322_08070 2-Cys peroxiredoxin K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D KIM322_03650 ferredoxin--NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D KIM322_09030 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D KIM322_07620 RNA methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D KIM322_05260 ptcA; putrescine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D KIM322_12000 hypothetical protein K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D KIM322_13860 nucleoside deoxyribosyltransferase K08728 E2.4.2.6; nucleoside deoxyribosyltransferase [EC:2.4.2.6]
D KIM322_05090 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D KIM322_02060 apbE; FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D KIM322_04120 frlD; fructosamine kinase FrlD K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218]
D KIM322_12130 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D KIM322_03170 tagatose-6-phosphate kinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D KIM322_09400 dihydroxyacetone kinase K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D KIM322_08020 putative pyruvate, phosphate dikinase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D KIM322_05420 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D KIM322_05080 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D KIM322_02050 protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D KIM322_13850 protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D KIM322_14040 protein-tyrosine-phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D KIM322_09990 haloacid dehalogenase K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D KIM322_00100 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D KIM322_12690 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D KIM322_12680 rnmV; ribonuclease M5 K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D KIM322_03140 hypothetical protein K25767 nag31; exo-acting protein-alpha-N-acetylgalactosaminidase [EC:3.2.1.217]
D KIM322_06840 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D KIM322_03240 phosphosugar isomerase K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D KIM322_03290 sugar isomerase K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D KIM322_04110 frlB; fructosamine deglycase FrlB K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-]
D KIM322_10360 nnrD; ADP-dependent (S)-NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D KIM322_13730 hypothetical protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D KIM322_08270 copB; copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D KIM322_04060 pacL; calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D KIM322_01460 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D KIM322_12710 magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D KIM322_01870 iolH; protein IolH K06605 iolH; myo-inositol catabolism protein IolH
D KIM322_03880 SIS domain-containing protein K19504 gfrE; glucoselysine-6-phosphate deglycase
D KIM322_03890 fructosamine deglycase K19510 gfrF; fructoselysine-6-phosphate deglycase
C 99982 Energy metabolism
C 99983 Lipid metabolism
D KIM322_07340 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D KIM322_07520 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D KIM322_02580 DNA nuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
D KIM322_03690 mprF; phosphatidylglycerol lysyltransferase K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D KIM322_07200 ribT; reductase K02859 ribT; riboflavin biosynthesis RibT protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D KIM322_06680 cold-shock protein K03704 cspA; cold shock protein
D KIM322_04750 arsC; regulatory protein Spx K16509 spxA; regulatory protein spx
C 99974 Translation
C 99975 Protein processing
D KIM322_06990 tig; trigger factor K03545 tig; trigger factor
D KIM322_03730 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D KIM322_04760 mecA; adaptor protein MecA K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D KIM322_06470 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D KIM322_09010 O-methyltransferase K07461 K07461; putative endonuclease
D KIM322_07380 DNA processing protein DprA K04096 smf; DNA processing protein
D KIM322_07680 dnaD; DNA replication protein DnaD K02086 dnaD; DNA replication protein
D KIM322_01140 hypothetical protein K07478 ycaJ; putative ATPase
D KIM322_06380 recombinase RarA K07478 ycaJ; putative ATPase
D KIM322_01590 tra1077G; transposase K07497 K07497; putative transposase
D KIM322_14310 hypothetical protein K07497 K07497; putative transposase
D KIM322_15030 hypothetical protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D KIM322_10810 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D KIM322_02820 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D KIM322_09200 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D KIM322_12080 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D KIM322_08280 branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D KIM322_08220 2-oxoglutarate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D KIM322_08430 2-oxoglutarate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D KIM322_14990 citP; 2-oxoglutarate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D KIM322_06850 bipA; GTP-binding protein K06207 typA; GTP-binding protein
D KIM322_07990 phoH; phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
C 99994 Others
D KIM322_10870 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D KIM322_08310 cutC; copper homeostasis protein K06201 cutC; copper homeostasis protein
D KIM322_05870 membrane protein K26996 sdpI; immunity protein, SdpI family
D KIM322_11270 hemolysin expression modulating protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D KIM322_04770 coiA; competence protein K06198 coiA; competence protein CoiA
D KIM322_10120 pheT_2; hypothetical protein K06878 K06878; tRNA-binding protein
D KIM322_02680 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D KIM322_00660 hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D KIM322_04560 hypothetical protein K07058 K07058; membrane protein
D KIM322_01070 lemA; membrane protein K03744 lemA; LemA protein
D KIM322_03640 dedA; membrane protein K03975 dedA; membrane-associated protein
C 99997 Function unknown
D KIM322_12500 phosphohydrolase K06885 K06885; uncharacterized protein
D KIM322_04630 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D KIM322_04360 membrane protein K06890 K06890; uncharacterized protein
D KIM322_12870 hydrolase K06950 K06950; uncharacterized protein
D KIM322_09710 membrane protein K07035 K07035; uncharacterized protein
D KIM322_07070 oxidoreductase K07124 K07124; uncharacterized protein
D KIM322_08670 short-chain dehydrogenase K07124 K07124; uncharacterized protein
D KIM322_06330 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D KIM322_08000 hypothetical protein K09117 K09117; uncharacterized protein
D KIM322_12990 hypothetical protein K09703 K09703; uncharacterized protein
D KIM322_09190 UPF0122 protein K09787 K09787; uncharacterized protein
D KIM322_07180 RNA-binding protein K00243 K00243; uncharacterized protein
D KIM322_01960 UPF0246 protein K09861 K09861; uncharacterized protein
D KIM322_12610 hypothetical protein K09963 K09963; uncharacterized protein
D KIM322_09070 UPF0154 protein K09976 K09976; uncharacterized protein
D KIM322_08870 DNA-binding protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 23, 2024