+E Transcription factors KO #

  Transcription Factors - Mycobacterium tuberculosis variant africanum

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D MAF_13390 alkA; putative ADA regulatory protein ALKA (regulatory protein of adaptative response) K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family D MAF_19960 putative transcriptional regulatory protein (probably LYSR-family) K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor C DeoR family C LacI family C GntR family D MAF_08040 putative transcriptional regulatory protein (probably GNTR-family) K03710 K03710; GntR family transcriptional regulator D MAF_05930 putative transcriptional regulatory protein (GNTR-family) K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MAF_04990 putative transcriptional regulatory protein (probably GNTR-family) K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D MAF_38700 ethR; transcriptional regulatory repressor protein (TETR-family) ETHR K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D MAF_14970 putative transcriptional regulatory protein K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D MAF_35870 transcriptional regulatory protein (probably TETR-family) K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MAF_35690 putative transcriptional regulatory protein (probably TETR-family) K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MAF_07000 putative transcriptional regulatory protein K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system D MAF_19860 mce3R; putative transcriptional repressor (probably TETR-family) MCE3R K27107 mce3R; TetR/AcrR family transcriptional regulator, mce3 operon repressor D MAF_34190 putative transcriptional regulatory protein K22295 K22295; TetR/AcrR family transcriptional regulator, repressor for neighboring sulfatase D MAF_30730 putative transcriptional regulatory protein (probably DEOR-family) K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response C Lrp/AsnC family D MAF_33020 putative transcriptional regulatory protein (probably ASNC-family) K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family C MerR family D MAF_03550 hspR; putative heat shock protein transcriptional repressor HspR (MERR family) K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR C Fur family D MAF_23730 furB; putative ferric uptake regulation protein FURB K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D MAF_19320 furA; ferric uptake regulation protein FURA (FUR) K22297 furA; Fur family transcriptional regulator, stress-responsive regulator C IclR family D MAF_17950 putative transcriptional regulatory protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor C CRP/FNR family D MAF_36830 putative transcriptional regulatory protein (probably CRP/FNR-family) K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MAF_16920 putative transcriptional regulatory protein K21884 cmr; CRP/FNR family transcriptional regulator, cAMP and macrophage regulator C Rrf2 family C ArsR family D MAF_26610 putative transcriptional regulatory protein (probably ARSR-family) K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D MAF_26590 putative transcriptional regulatory protein (probably ARSR-family) K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D MAF_20060 putative transcriptional regulatory protein K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D MAF_37530 transcriptional regulatory protein (probably ArsR-family) K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor D MAF_23720 putative transcriptional regulatory protein (probably ARSR-family) K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D MAF_11450 putative transcriptional regulator protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D MAF_04680 putative transcriptional regulatory protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D MAF_27500 putative transcriptional regulatory protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family C Other families D MAF_27150 ideR; iron-dependent repressor and activator IDER K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D MAF_27930 sirR; putative transcriptional repressor SIRR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D MAF_18680 putative transcriptional regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D MAF_32900 birA; putative bifunctional protein BIRA: biotin operon repressor + biotin--[acetyl-CoA-carboxylase] synthetase (biotin--protein ligase) K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D MAF_02130 nadR; putative transcriptional regulatory protein NADR (probably ASNC-family) K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D MAF_38640 conserved hypothetical protein K27097 espR; ESX-1-secreted protein regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D MAF_32710 whiB2; putative transcriptional regulatory protein WHIB-like WHIB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MAF_34300 whiB3; transcriptional regulatory protein WHIB-like WHIB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MAF_32280 whiB1; putative transcriptional regulatory protein WHIB-like WHIB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MAF_36890 whiB4; putative transcriptional regulatory protein WHIB-like WHIB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MAF_00220 whiB5; putative transcriptional regulatory protein WhiB-like WhiB5 K18956 whiB5; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MAF_38770 whiB6; putative transcriptional regulatory protein WHIB-like WHIB6 K18957 whiB6; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MAF_32040 whiB7; putative transcriptional regulatory protein WHIB-like WHIB7 K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MAF_09760 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MAF_01910 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MAF_33410 unnamed protein product K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MAF_12880 embR; putative transcriptional regulatory protein EMBR K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MAF_31310 putative transcriptional regulatory protein K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MAF_39320 parB; putative chromosome partitioning protein PARB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MAF_35960 putative transcription factor K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D MAF_16700 argR; putative arginine repressor argR (AHRC) K03402 argR; transcriptional regulator of arginine metabolism D MAF_23880 hrcA; putative heat shock protein transcriptional repressor HRCA K03705 hrcA; heat-inducible transcriptional repressor D MAF_06830 conserved hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D MAF_14010 pyrR; putative pyrimidine operon regulatory protein PYRR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D MAF_00380 conserved hypothetical protein K07735 algH; putative transcriptional regulator D MAF_27220 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR D MAF_21790 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0