+E Messenger RNA Biogenesis KO
#
Messenger RNA Biogenesis - Monopterus albus (swamp eel)
%
!
AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 109972569 rnmt; LOW QUALITY PROTEIN: mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 109962341 rngtt; mRNA-capping enzyme K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 109957017 cdk7; cyclin-dependent kinase 7 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 109954305 cmtr1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 109966039 cmtr2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 109963350 fam103a1; RNMT-activating mini protein K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 109956697 ncbp1; nuclear cap-binding protein subunit 1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 109961773 nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 109963050 nudt21; cleavage and polyadenylation specificity factor subunit 5 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 109959792 cpsf6; cleavage and polyadenylation specificity factor subunit 6 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 109964866 cpsf7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 109954801 clp1; polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 109974211 pcf11; pre-mRNA cleavage complex 2 protein Pcf11 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 109973952 cpsf1; cleavage and polyadenylation specificity factor subunit 1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 109962342 cpsf2; LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 109955017 cpsf3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 109974481 cleavage and polyadenylation specificity factor subunit 3-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 109952667 cpsf4; cleavage and polyadenylation specificity factor subunit 4 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 109958488 fip1l1; LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 109974828 wdr33; pre-mRNA 3' end processing protein WDR33 K15542 PFS2; polyadenylation factor subunit 2
E 109951932 WD repeat-containing protein 82-like isoform X1 K14962 WDR82; COMPASS component SWD2
E 109959037 wdr82; WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 109963159 serine/threonine-protein phosphatase alpha-2 isoform-like isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109959693 ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109962346 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109968043 ppp1cb; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109973606 serine/threonine-protein phosphatase alpha-2 isoform-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109969433 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 109964481 ssu72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 109970610 cstf1; cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 109954939 cstf2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 109969033 cstf3; cleavage stimulation factor subunit 3 K14408 CSTF3; cleavage stimulation factor subunit 3
E 109963763 sympk; symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 109966897 small nuclear ribonucleoprotein-associated protein B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 109965651 snrpd3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 109971978 snrpe; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 109967806 snrpf; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 109969963 snrpg; small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 109958725 lsm10; U7 snRNA-associated Sm-like protein LSm10 isoform X1 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 109955563 lsm11; U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 109962342 cpsf2; LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 109955017 cpsf3; cleavage and polyadenylation specificity factor subunit 3 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 109974481 cleavage and polyadenylation specificity factor subunit 3-like K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 109954939 cstf2; cleavage stimulation factor subunit 2 isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 109963763 sympk; symplekin K06100 SYMPK; symplekin
E 109957473 slbp; histone RNA hairpin-binding protein isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 109974218 uncharacterized protein LOC109974218 isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 109967394 casp8ap2; CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 109974378 supt4h1; transcription elongation factor SPT4 isoform X1 K15171 SUPT4H1; transcription elongation factor SPT4
E 109973261 supt5h; transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 109966479 mettl3; N6-adenosine-methyltransferase 70 kDa subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 109961417 mettl14; N6-adenosine-methyltransferase subunit METTL14 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 109960183 mettl16; methyltransferase-like protein 16 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 109953052 wtap; pre-mRNA-splicing regulator WTAP K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 109964137 kiaa1429; protein virilizer homolog K22910 VIRMA; protein virilizer
E 109966926 rbm15b; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 109968418 rbm15; putative RNA-binding protein 15 K13190 RBM15; RNA-binding protein 15
E 109955672 zc3h13; zinc finger CCCH domain-containing protein 13 isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 109956751 matrin-3-like isoform X1 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 109958915 trichohyalin-like K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 109960966 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Hakai-like K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 109962185 poly(A) polymerase type 3-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 109973580 papolg; poly(A) polymerase gamma isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 109970539 poly(A) polymerase alpha-B-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 109957013 papd4; poly(A) RNA polymerase GLD2 isoform X1 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 109963569 tut1; speckle targeted PIP5K1A-regulated poly(A) polymerase K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 109964414 bard1; BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 109964404 rbm26; RNA-binding protein 26 isoform X1 K13192 RBM26; RNA-binding protein 26
E 109955881 fto; alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 109973318 alkbh5; RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 109959029 TAR DNA-binding protein 43-like isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
E 109971652 tardbp; LOW QUALITY PROTEIN: TAR DNA-binding protein 43 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 109960380 dhx40; probable ATP-dependent RNA helicase DHX40 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 109967589 kin; DNA/RNA-binding protein KIN17 K13102 KIN; DNA/RNA-binding protein KIN17
D 109958046 mettl8; methyltransferase-like protein 8 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 109964684 mettl22; methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 109964845 fam46b; protein FAM46B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 109972618 fam46a; protein FAM46A K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 109973837 protein FAM46A-like K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 109969886 fam46c; protein FAM46C isoform X1 K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 109970035 zc3h14; zinc finger CCCH domain-containing protein 14 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 109952436 serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule
D 109959537 LOW QUALITY PROTEIN: serrate RNA effector molecule homolog K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 109965564 rbm8a; RNA-binding protein 8A K12876 RBM8A; RNA-binding protein 8A
E 109965695 magoh; protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 109956830 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 109958939 alyref; THO complex subunit 4 isoform X1 K12881 THOC4; THO complex subunit 4
E 109953486 eif4a3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 109964472 ccdc174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 109967533 casc3; protein CASC3 K14323 CASC3; protein CASC3
E 109955743 sap18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 109972792 pnn; pinin K13114 PNN; pinin
E 109962613 LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 109974410 LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus-like K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 109951543 RNA-binding protein with serine-rich domain 1-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 109973213 RNA-binding protein with serine-rich domain 1-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 109964986 srrm1; serine/arginine repetitive matrix protein 1 isoform X1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 109955440 thoc1; THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1
E 109959435 thoc2; THO complex subunit 2 K12879 THOC2; THO complex subunit 2
E 109956685 thoc3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 109956830 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 109958939 alyref; THO complex subunit 4 isoform X1 K12881 THOC4; THO complex subunit 4
E 109956904 thoc5; THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 109967553 thoc6; THO complex subunit 6 homolog K13175 THOC6; THO complex subunit 6
E 109956096 thoc7; THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
E 109953909 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 109971077 pcid2; PCI domain-containing protein 2 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 109958495 transcription and mRNA export factor ENY2-2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 109958681 eny2; transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 109968403 caltractin-like K10840 CETN2; centrin-2
E 109953177 centrin-3-like K16466 CETN3; centrin-3
E 109972627 mcm3ap; germinal-center associated nuclear protein K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 109961702 tpr; nucleoprotein TPR isoform X1 K09291 TPR; nucleoprotein TPR
E 109974728 nucleoprotein TPR-like K09291 TPR; nucleoprotein TPR
E 109956054 rae1; mRNA export factor isoform X1 K14298 RAE1; mRNA export factor
E 109952626 sec13; protein SEC13 homolog K14004 SEC13; protein transport protein SEC13
E 109967818 nup37; nucleoporin Nup37 K14302 NUP37; nuclear pore complex protein Nup37
E 109969446 nup85; nuclear pore complex protein Nup85 K14304 NUP85; nuclear pore complex protein Nup85
E 109962357 nup43; nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 109967665 nup50; nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 109972364 nup54; nucleoporin p54 K14308 NUP54; nuclear pore complex protein Nup54
E 109958056 nup62; nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62
E 109968496 nup88; nuclear pore complex protein Nup88 K14318 NUP88; nuclear pore complex protein Nup88
E 109962542 nup93; nuclear pore complex protein Nup93 K14309 NUP93; nuclear pore complex protein Nup93
E 109974209 nup98; LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 109967610 nup107; nuclear pore complex protein Nup107 K14301 NUP107; nuclear pore complex protein Nup107
E 109974818 nup133; LOW QUALITY PROTEIN: nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 109972300 nup188; LOW QUALITY PROTEIN: nucleoporin NUP188 homolog K14311 NUP188; nuclear pore complex protein Nup188
E 109963907 nup153; nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 109970810 nup155; nuclear pore complex protein Nup155 K14312 NUP155; nuclear pore complex protein Nup155
E 109969129 nup160; nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 109973929 nup35; nucleoporin NUP53 isoform X1 K14313 NUP35; nuclear pore complex protein Nup53
E 109961818 nup205; nuclear pore complex protein Nup205 K14310 NUP205; nuclear pore complex protein Nup205
E 109966057 nup210; nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210
E 109960617 nup214; LOW QUALITY PROTEIN: nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214
E 109959191 nuclear envelope pore membrane protein POM 121-like isoform X1 K14316 POM121; nuclear pore complex protein Nup121
E 109963708 nup58; nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 109968127 nupl2; nucleoporin-like protein 2 isoform X1 K14321 NUPL2; nucleoporin-like protein 2
E 109955482 ndc1; nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 109963867 seh1l; nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1
E 109968299 RANBP2-like and GRIP domain-containing protein 8 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 109968067 sentrin-specific protease 2-like K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 109966032 aaas; aladin isoform X1 K14320 AAAS; aladin
E 109953177 centrin-3-like K16466 CETN3; centrin-3
E 109957325 gle1; LOW QUALITY PROTEIN: nucleoporin GLE1 K18723 GLE1; nucleoporin GLE1
E 109955377 nxf1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 109955175 NTF2-related export protein 2-like K14285 NXT1_2; NTF2-related export protein 1/2
E 109955254 NTF2-related export protein 2-like K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 109953755 ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 109963306 anp32a; acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 109955510 anp32b; acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X1 K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 109951911 acidic leucine-rich nuclear phosphoprotein 32 family member D-like K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 109952055 ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 109965291 ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 109965953 elavl3; ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 109966533 elavl2; ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 109967453 elavl4; ELAV-like protein 4 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 109957406 faf2; FAS-associated factor 2 isoform X1 K18726 FAF2; FAS-associated factor 2
E 109956931 vcp; transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase
E 109952417 transitional endoplasmic reticulum ATPase-like K13525 VCP; transitional endoplasmic reticulum ATPase
E 109955054 vcpkmt; protein-lysine methyltransferase METTL21D K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 109957855 transportin-2 K18727 TNPO2; transportin-2
E 109969466 transportin-2-like K18727 TNPO2; transportin-2
E 109974811 exportin-1-like K14290 XPO1; exportin-1
E 109973586 exportin-1 K14290 XPO1; exportin-1
E 109951183 xpo7; exportin-7 K18460 XPO7; exportin-7
E 109952669 rangap1; ran GTPase-activating protein 1 isoform X1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 109952688 LOW QUALITY PROTEIN: ran GTPase-activating protein 1-like K14319 RANGAP1; Ran GTPase-activating protein 1
D eIF4F and regulatory proteins
E 109964957 eukaryotic translation initiation factor 4E-1A-like isoform X1 K03259 EIF4E; translation initiation factor 4E
E 109961214 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 109964302 eukaryotic translation initiation factor 4E-1A isoform X1 K03259 EIF4E; translation initiation factor 4E
E 109969308 eif4e2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 109957192 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 109951968 eif4a2; eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 109956345 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 109963642 eif4g2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 109951590 eif4g1; eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 109957664 eukaryotic translation initiation factor 4 gamma 1-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 109967057 eif4g3; eukaryotic translation initiation factor 4 gamma 3 K03260 EIF4G; translation initiation factor 4G
E 109956185 eif4b; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B
E 109951797 eif4h; eukaryotic translation initiation factor 4H isoform X1 K24086 EIF4H; translation initiation factor 4H
E 109961516 eukaryotic translation initiation factor 4E-binding protein 1-like K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 109965609 eukaryotic translation initiation factor 4E-binding protein 1-like K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 109961947 eif4ebp2; eukaryotic translation initiation factor 4E-binding protein 2 isoform X1 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 109957767 eif4ebp3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 109959003 eif4enif1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 109967997 protein angel homolog 1-like isoform X1 K18729 ANGEL; protein angel
E 109952812 angel2; protein angel homolog 2 isoform X1 K18729 ANGEL; protein angel
E 109957520 fmr1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 109969416 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 109969866 fxr1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 109962045 cyfip1; cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 109956451 cyfip2; cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 109952157 gemin5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 109955241 tacc3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 109963346 cpeb1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109956779 cytoplasmic polyadenylation element-binding protein 4-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109962034 cpeb2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109959178 cpeb3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109960028 cpeb4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109960579 LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX3X-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109957659 gigyf2; PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 109971925 gigyf1; LOW QUALITY PROTEIN: PERQ amino acid-rich with GYF domain-containing protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 109963864 pabpc1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 109964645 embryonic polyadenylate-binding protein-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 109964928 polyadenylate-binding protein 4-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 109958607 LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 109956669 paip1; polyadenylate-binding protein-interacting protein 1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 109956683 polyadenylate-binding protein-interacting protein 2-like isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 109965797 paip2b; polyadenylate-binding protein-interacting protein 2B isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 109958622 skiv2l; helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 109956461 deformed epidermal autoregulatory factor 1 homolog isoform X1 K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 109953606 mcts1; malignant T-cell-amplified sequence 1 isoform X1 K07575 MCTS; malignant T-cell-amplified sequence
E 109952834 denr; density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 109969664 LOW QUALITY PROTEIN: APOBEC1 complementation factor-like K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 109970282 pym1; partner of Y14 and mago K14294 WIBG; partner of Y14 and mago
E 109958123 hnrnpa3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109970759 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109954841 msi1; RNA-binding protein Musashi homolog 1 K14411 MSI; RNA-binding protein Musashi
E 109955944 RNA-binding protein Musashi homolog 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 109959568 msi2; RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 109966857 dazap1; DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 109956384 hbs1l; HBS1-like protein K14416 HBS1; elongation factor 1 alpha-like protein
E 109973605 pelo; protein pelota homolog isoform X1 K06965 PELO; protein pelota
E 109965981 pabpn1; polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 109966233 pabpn1l; embryonic polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 109956102 ATP-dependent RNA helicase DDX19B K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 109951216 ATP-dependent RNA helicase DDX19A-like K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 109965890 xab2; pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 109952582 sarnp; SAP domain-containing ribonucleoprotein K18732 SARNP; SAP domain-containing ribonucleoprotein
E 109964923 rcc1; regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation
E 109955880 larp6; la-related protein 6 isoform X1 K18733 LARP6; la-related protein 6
E 109957495 transcriptional activator protein Pur-alpha-like K21772 PURA; transcriptional activator protein Pur-alpha
E 109959446 transcriptional activator protein Pur-alpha-like isoform X1 K21772 PURA; transcriptional activator protein Pur-alpha
E 109951324 LOW QUALITY PROTEIN: transcriptional activator protein Pur-beta-like K21799 PURB; transcriptional activator protein Pur-beta
E 109953490 LOW QUALITY PROTEIN: transcriptional activator protein Pur-beta-like K21799 PURB; transcriptional activator protein Pur-beta
E 109974675 poldip3; LOW QUALITY PROTEIN: polymerase delta-interacting protein 3 K22414 POLDIP3; polymerase delta-interacting protein 3
E 109970377 zc3h11a; LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 11A K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 109970189 leng8; leukocyte receptor cluster member 8 K23802 LENG8; SAC3 family protein LENG8/THP3
E 109973594 patl2; protein PAT1 homolog 2 isoform X1 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 109951203 etf1; eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 109964747 eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like K03267 ERF3; peptide chain release factor subunit 3
E 109971848 gspt1; eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 109966845 upf1; regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 109969255 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 109967603 upf2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 109955813 upf3b; regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3
E 109965338 regulator of nonsense transcripts 3A-like K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 109957364 ppp2cb; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 109971173 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 109966816 ppp2ca; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 109960236 ppp2r1b; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 109958487 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109956063 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109955448 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109962247 ppp2r2d; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109960739 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109954812 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 109965450 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 109972804 ppp2r3c; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 109969610 ppp2r3a; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 109955145 ppp2r5c; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109962198 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109962327 ppp2r5a; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109973019 ppp2r5d; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109966624 ppp2r5e; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 109965822 ppp2r5b; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 109964693 smg1; serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 109965598 smg5; protein SMG5 K11125 SMG5; protein SMG5
E 109970497 smg6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 109973982 smg7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 109959222 smg8; LOW QUALITY PROTEIN: protein SMG8 K18734 SMG8; protein SMG8
E 109957659 gigyf2; PERQ amino acid-rich with GYF domain-containing protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 109971925 gigyf1; LOW QUALITY PROTEIN: PERQ amino acid-rich with GYF domain-containing protein 1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 109959156 secisbp2; selenocysteine insertion sequence-binding protein 2 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 109963321 secisbp2l; selenocysteine insertion sequence-binding protein 2-like K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 109968495 dhx34; probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 109952874 gtpbp1; GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1
E 109970358 GTP-binding protein 1-like isoform X1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 109960751 pum3; pumilio homolog 3 isoform X1 K14844 PUF6; pumilio homology domain family member 6
E 109955812 myo5a; unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 109972236 myo5c; unconventional myosin-Vc isoform X1 K10357 MYO5; myosin V
E 109973121 myo5b; unconventional myosin-Vb K10357 MYO5; myosin V
E 109974139 unconventional myosin-Va-like K10357 MYO5; myosin V
E 109974166 unconventional myosin-Vb-like K10357 MYO5; myosin V
E 109961847 protein bicaudal D homolog 1-like isoform X1 K18739 BICD; protein bicaudal D
E 109951938 protein bicaudal D homolog 2-like isoform X1 K18739 BICD; protein bicaudal D
E 109964726 protein bicaudal D homolog 1-like isoform X1 K18739 BICD; protein bicaudal D
E 109966073 bicd2; protein bicaudal D homolog 2 isoform X1 K18739 BICD; protein bicaudal D
E 109966746 protein bicaudal D homolog 2-like K18739 BICD; protein bicaudal D
E 109967960 exd1; piRNA biogenesis protein EXD1 isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 109973284 actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 109972432 actb; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 109958614 myelin basic protein-like isoform X1 K17269 MBP; myelin basic protein
E 109958541 mbp; myelin basic protein K17269 MBP; myelin basic protein
E 109958542 myelin basic protein-like isoform X1 K17269 MBP; myelin basic protein
E 109955479 vim; vimentin K07606 VIM; vimentin
E 109962550 metallothionein K14739 MT1_2; metallothionein 1/2
E 109973991 LOW QUALITY PROTEIN: transcriptional regulator Myc-B-like K04377 MYC; Myc proto-oncogene protein
E 109971489 myc; myc proto-oncogene protein isoform X1 K04377 MYC; Myc proto-oncogene protein
E 109974776 transcriptional regulator Myc-2-like K04377 MYC; Myc proto-oncogene protein
E 109954817 T-box-containing protein TBX6L-like K10180 TBX6; T-box protein 6
E 109973597 T-box transcription factor TBX6-like K10180 TBX6; T-box protein 6
E 109965658 T-box-containing protein TBX6L-like isoform X1 K10180 TBX6; T-box protein 6
E 109962414 nanos homolog 1-like K18741 NANOS1; protein nanos 1
E 109972043 nanos homolog 1-like K18741 NANOS1; protein nanos 1
E 109961494 nanos homolog 2-like K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 109957361 far upstream element-binding protein 3-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 109955386 fubp1; far upstream element-binding protein 1 isoform X1 K13210 FUBP; far upstream element-binding protein
E 109960661 far upstream element-binding protein 3-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 109969523 far upstream element-binding protein 2-like isoform X1 K13210 FUBP; far upstream element-binding protein
E 109956834 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 109961115 elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 109953430 elongation factor 1-alpha isoform X1 K03231 EEF1A; elongation factor 1-alpha
E 109953431 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 109975010 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 109971503 elongation factor 1-alpha-like K03231 EEF1A; elongation factor 1-alpha
E 109955865 eef1g; elongation factor 1-gamma isoform X1 K03233 EEF1G; elongation factor 1-gamma
E 109973923 hax1; HCLS1-associated protein X-1 K16220 HAX1; HCLS1-associated protein X-1
E 109960386 agfg1; arf-GAP domain and FG repeat-containing protein 1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 109966510 arf-GAP domain and FG repeat-containing protein 1-like isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 109959001 stau1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 109960116 stau2; double-stranded RNA-binding protein Staufen homolog 2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 109968187 igf2bp3; insulin-like growth factor 2 mRNA-binding protein 3 isoform X1 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 109965246 polypyrimidine tract-binding protein 1-like isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 109969612 polypyrimidine tract-binding protein 1-like K13218 PTBP1; polypyrimidine tract-binding protein 1
E 109963346 cpeb1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109956779 cytoplasmic polyadenylation element-binding protein 4-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109962034 cpeb2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109959178 cpeb3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109960028 cpeb4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 109957520 fmr1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 109969416 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 109969866 fxr1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 109962045 cyfip1; cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 109956451 cyfip2; cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 109955708 pcbp2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 109966128 poly(rC)-binding protein 2-like isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 109952962 pcbp3; poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109961339 poly(rC)-binding protein 3-like isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109964651 poly(rC)-binding protein 4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109966905 LOW QUALITY PROTEIN: poly(rC)-binding protein 4-like K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 109974817 caprin1; LOW QUALITY PROTEIN: caprin-1 K18743 CAPRIN1; caprin-1
E 109966169 LOW QUALITY PROTEIN: caprin-1-like K18743 CAPRIN1; caprin-1
E 109973969 caprin2; caprin-2 isoform X1 K18744 CAPRIN2; caprin-2
E 109970194 ybx1; nuclease-sensitive element-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 109954661 protein argonaute-3 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109954662 protein argonaute-1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109958684 LOW QUALITY PROTEIN: protein argonaute-3-like K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109958748 protein argonaute-4 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109968105 protein argonaute-2 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 109964957 eukaryotic translation initiation factor 4E-1A-like isoform X1 K03259 EIF4E; translation initiation factor 4E
E 109961214 eukaryotic translation initiation factor 4E-like K03259 EIF4E; translation initiation factor 4E
E 109964302 eukaryotic translation initiation factor 4E-1A isoform X1 K03259 EIF4E; translation initiation factor 4E
E 109969308 eif4e2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 109966845 upf1; regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 109969255 regulator of nonsense transcripts 1-like K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 109960579 LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX3X-like K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 109954660 probable ATP-dependent RNA helicase ddx6 isoform X1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109958632 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109968454 ddx6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109953287 mex3b; RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 109961532 LOW QUALITY PROTEIN: RNA-binding protein MEX3B-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 109974699 mex3a; RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 109969355 RNA-binding protein MEX3B-like K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 109965944 fastk; fas-activated serine/threonine kinase K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 109956106 protein LSM14 homolog B-like isoform X1 K18749 LSM14; protein LSM14
E 109955877 lsm14a; protein LSM14 homolog A isoform X1 K18749 LSM14; protein LSM14
E 109966061 lsm14b; protein LSM14 homolog B K18749 LSM14; protein LSM14
E 109969089 protein LSM14 homolog A-like isoform X1 K18749 LSM14; protein LSM14
E 109955708 pcbp2; poly(rC)-binding protein 2 isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 109966128 poly(rC)-binding protein 2-like isoform X1 K13162 PCBP2; poly(rC)-binding protein 2
E 109970194 ybx1; nuclease-sensitive element-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
E 109964916 limd1; LIM domain-containing protein 1 K16682 AJUBA; LIM domain-containing protein
E 109955854 wtip; Wilms tumor protein 1-interacting protein isoform X1 K16682 AJUBA; LIM domain-containing protein
E 109974427 LOW QUALITY PROTEIN: LIM domain-containing protein ajuba-like K16682 AJUBA; LIM domain-containing protein
E 109951560 mov10; putative helicase MOV-10 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 109969395 putative helicase mov-10-B.1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 109954735 pnrc2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 109967779 transportin-1 K18752 TNPO1; transportin-1
E 109964693 smg1; serine/threonine-protein kinase SMG1 isoform X1 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 109965598 smg5; protein SMG5 K11125 SMG5; protein SMG5
E 109970497 smg6; telomerase-binding protein EST1A K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 109973982 smg7; protein SMG7 isoform X1 K14409 SMG7; protein SMG7
E 109960202 mRNA decay activator protein ZFP36-like K15308 TTP; tristetraprolin
E 109952889 LOW QUALITY PROTEIN: mRNA decay activator protein ZFP36L1-like K18753 ZFP36L; butyrate response factor
E 109964599 LOW QUALITY PROTEIN: mRNA decay activator protein ZFP36L1-like K18753 ZFP36L; butyrate response factor
E 109960263 LOW QUALITY PROTEIN: mRNA decay activator protein ZFP36L1-like K18753 ZFP36L; butyrate response factor
E 109970962 mRNA decay activator protein ZFP36L1-like isoform X1 K18753 ZFP36L; butyrate response factor
E 109974115 LOW QUALITY PROTEIN: mRNA decay activator protein ZFP36L2-B-like K18753 ZFP36L; butyrate response factor
E 109954669 lin28a; protein lin-28 homolog A isoform X1 K18754 LIN28; protein lin-28
E 109963699 protein lin-28 homolog A-like K18754 LIN28; protein lin-28
E 109953121 lin28b; protein lin-28 homolog B isoform X1 K18754 LIN28; protein lin-28
E 109957861 htt; LOW QUALITY PROTEIN: huntingtin K04533 HD; huntingtin
E 109973970 ipo8; importin-8 isoform X1 K18755 IPO8; importin-8
E 109961692 bicc1; protein bicaudal C homolog 1 isoform X1 K18756 BICC1; protein bicaudal C
E 109974295 protein bicaudal C homolog 1-like K18756 BICC1; protein bicaudal C
E 109958123 hnrnpa3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109970759 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 109952408 prkaca; cAMP-dependent protein kinase catalytic subunit alpha K04345 PKA; protein kinase A [EC:2.7.11.11]
E 109957708 cAMP-dependent protein kinase catalytic subunit beta K04345 PKA; protein kinase A [EC:2.7.11.11]
E 109958253 cAMP-dependent protein kinase catalytic subunit beta-like isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 109965931 cAMP-dependent protein kinase catalytic subunit alpha K04345 PKA; protein kinase A [EC:2.7.11.11]
E 109962451 la-related protein 1B-like isoform X1 K18757 LARP1; la-related protein 1
E 109966801 larp1; la-related protein 1 isoform X1 K18757 LARP1; la-related protein 1
E 109956632 atxn2; ataxin-2 isoform X1 K23625 ATXN2_2L; ataxin 2/2L
E 109967554 atxn2l; ataxin-2-like protein K23625 ATXN2_2L; ataxin 2/2L
E 109973619 LOW QUALITY PROTEIN: ataxin-2-like protein K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 109960699 dcp2; m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 109971956 dcp1a; mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 109959790 dcp1b; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 109954930 lsm1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 109965740 lsm2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 109972402 lsm3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 109966843 lsm4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 109959970 lsm5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 109955533 lsm6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 109967458 lsm7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 109974614 lsm8; LSM8 homolog, U6 small nuclear RNA associated isoform X1 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 109959586 kinesin light chain 1-like isoform X1 K10407 KLC; kinesin light chain
E 109953281 klc1; kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 109973551 kinesin light chain 1-like isoform X1 K10407 KLC; kinesin light chain
E 109971449 klc2; kinesin light chain 2 K10407 KLC; kinesin light chain
E 109955812 myo5a; unconventional myosin-Va isoform X1 K10357 MYO5; myosin V
E 109972236 myo5c; unconventional myosin-Vc isoform X1 K10357 MYO5; myosin V
E 109973121 myo5b; unconventional myosin-Vb K10357 MYO5; myosin V
E 109974139 unconventional myosin-Va-like K10357 MYO5; myosin V
E 109974166 unconventional myosin-Vb-like K10357 MYO5; myosin V
E 109964366 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 109964367 tubulin alpha-4A chain K07374 TUBA; tubulin alpha
E 109964369 tubulin alpha chain K07374 TUBA; tubulin alpha
E 109960573 tubulin alpha chain-like K07374 TUBA; tubulin alpha
E 109952579 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 109952595 tubulin alpha-1B chain-like K07374 TUBA; tubulin alpha
E 109952596 tubulin alpha-1 chain-like K07374 TUBA; tubulin alpha
E 109955658 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 109951220 tubulin alpha-1B chain isoform X1 K07374 TUBA; tubulin alpha
E 109975055 tubulin alpha-1B chain-like K07374 TUBA; tubulin alpha
E 109963346 cpeb1; cytoplasmic polyadenylation element-binding protein 1 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109956779 cytoplasmic polyadenylation element-binding protein 4-like K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109962034 cpeb2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109959178 cpeb3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109960028 cpeb4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 109952157 gemin5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 109955241 tacc3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 109958441 trinucleotide repeat-containing gene 6C protein-like isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 109958890 tnrc6a; trinucleotide repeat-containing gene 6A protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 109974631 LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6B protein-like K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 109969491 trinucleotide repeat-containing gene 6C protein-like K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 109971854 tnrc6b; trinucleotide repeat-containing gene 6B protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 109962521 cnot1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 109967889 CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 109967706 cnot2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 109968885 CCR4-NOT transcription complex subunit 3-like K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 109970197 cnot3; CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 109973034 cnot4; CCR4-NOT transcription complex subunit 4 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 109957331 cnot6l; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 109973146 cnot6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 109957528 CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109952160 cnot8; CCR4-NOT transcription complex subunit 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109955824 LOW QUALITY PROTEIN: uncharacterized protein KIAA0355 homolog K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 109974060 dis3l2; DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 109970328 pan2; PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 109960159 pan3; PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 109952645 tob2; protein Tob2 K14443 TOB; protein Tob/BTG
E 109964920 protein BTG4-like K14443 TOB; protein Tob/BTG
E 109952303 protein Tob1-like K14443 TOB; protein Tob/BTG
E 109959845 btg1; protein BTG1 K14443 TOB; protein Tob/BTG
E 109959182 maternal B9.10 protein-like K14443 TOB; protein Tob/BTG
E 109967056 btg3; protein BTG3 K14443 TOB; protein Tob/BTG
E 109969517 LOW QUALITY PROTEIN: protein Tob1-like K14443 TOB; protein Tob/BTG
E 109959003 eif4enif1; eukaryotic translation initiation factor 4E transporter isoform X1 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 109952113 patl1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 109973623 edc3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 109962519 edc4; enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 109957874 nanos3; nanos homolog 3 K18761 NANOS3; protein nanos 3
E 109971341 nanos homolog 2-like K18761 NANOS3; protein nanos 3
E 109967603 upf2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 109955813 upf3b; regulator of nonsense transcripts 3B K14328 UPF3; regulator of nonsense transcripts 3
E 109965338 regulator of nonsense transcripts 3A-like K14328 UPF3; regulator of nonsense transcripts 3
E 109954567 E3 ubiquitin-protein ligase TRIM21-like K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 109951670 trim71; E3 ubiquitin-protein ligase TRIM71 isoform X1 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 109955882 polr2g; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 109959079 interferon-induced, double-stranded RNA-activated protein kinase-like K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 109962058 zar1; LOW QUALITY PROTEIN: zygote arrest protein 1 K18762 ZAR1; zygote arrest protein 1
E 109971876 zar1l; ZAR1-like protein K18762 ZAR1; zygote arrest protein 1
E 109955169 ythdf2; YTH domain-containing family protein 2 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 109960096 ythdf3; YTH domain-containing family protein 3 K20102 YTHDF; YTH domain-containing family protein
E 109964663 ythdf1; YTH domain-containing family protein 1 isoform X1 K20102 YTHDF; YTH domain-containing family protein
E 109966779 YTH domain-containing family protein 1-like isoform X1 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 109954922 nucleolysin TIA-1-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 109959563 tial1; nucleolysin TIAR K13201 TIA1; nucleolysin TIA-1/TIAR
E 109969776 nucleolysin TIA-1-like isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 109963864 pabpc1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 109964645 embryonic polyadenylate-binding protein-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 109964928 polyadenylate-binding protein 4-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 109958607 LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 109959001 stau1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 109960116 stau2; double-stranded RNA-binding protein Staufen homolog 2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 109957520 fmr1; synaptic functional regulator FMR1 K15516 FMR; fragile X mental retardation protein
E 109969416 fragile X mental retardation syndrome-related protein 1-like isoform X1 K15516 FMR; fragile X mental retardation protein
E 109969866 fxr1; fragile X mental retardation syndrome-related protein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 109952055 ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 109965291 ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 109956761 g3bp1; ras GTPase-activating protein-binding protein 1 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 109955549 g3bp2; ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 109972740 eif2a; eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 109968211 eif3b; eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 109957192 eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 109951968 eif4a2; eukaryotic initiation factor 4A-II K03257 EIF4A; translation initiation factor 4A
E 109953486 eif4a3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 109956185 eif4b; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4B K03258 EIF4B; translation initiation factor 4B
E 109956345 eukaryotic translation initiation factor 4 gamma 2-like K03260 EIF4G; translation initiation factor 4G
E 109963642 eif4g2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 109951590 eif4g1; eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 109957664 eukaryotic translation initiation factor 4 gamma 1-like isoform X1 K03260 EIF4G; translation initiation factor 4G
E 109967057 eif4g3; eukaryotic translation initiation factor 4 gamma 3 K03260 EIF4G; translation initiation factor 4G
E 109957509 rps6ka6; ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 109955185 ribosomal protein S6 kinase alpha-1 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 109951058 rps6ka3; ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 109969023 ribosomal protein S6 kinase alpha-2-like K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 109973184 rack1; receptor of activated protein C kinase 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 109959637 TNF receptor-associated factor 2-like isoform X1 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 109960623 traf2; TNF receptor-associated factor 2 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 109969783 TNF receptor-associated factor 2-like K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 109955377 nxf1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
E 109964466 tdrd3; tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3
E 109956100 la-related protein 4-like K18763 LARP4; la-related protein 4
E 109974930 larp4b; la-related protein 4B isoform X1 K18763 LARP4; la-related protein 4
E 109968893 la-related protein 4-like K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 109971956 dcp1a; mRNA-decapping enzyme 1A K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 109959790 dcp1b; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 109960699 dcp2; m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 109954660 probable ATP-dependent RNA helicase ddx6 isoform X1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109958632 probable ATP-dependent RNA helicase ddx6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109968454 ddx6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 109973623 edc3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 109962519 edc4; enhancer of mRNA-decapping protein 4 isoform X1 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 109952113 patl1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 109954930 lsm1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 109965740 lsm2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 109972402 lsm3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 109966843 lsm4; U6 snRNA-associated Sm-like protein LSm4 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 109959970 lsm5; U6 snRNA-associated Sm-like protein LSm5 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 109955533 lsm6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 109967458 lsm7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 109974614 lsm8; LSM8 homolog, U6 small nuclear RNA associated isoform X1 K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 109971310 xrn2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 109970390 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 109957539 dcps; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 109972003 helz; LOW QUALITY PROTEIN: probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 109957813 exosc1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
E 109960681 exosc2; exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 109956749 exosc3; exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E 109957689 exosc4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 109963216 exosc5; exosome complex component RRP46 K12590 RRP46; exosome complex component RRP46
E 109962524 exosc6; exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 109958739 exosc7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
E 109971911 exosc8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 109957920 exosc9; exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 109960138 dis3; exosome complex exonuclease RRP44 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 109951240 dis3l; DIS3-like exonuclease 1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 109971039 exosc10; exosome component 10 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 109961136 c1d; nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 109969154 mphosph6; M-phase phosphoprotein 6 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
D TRAMP complex
E 109958283 non-canonical poly(A) RNA polymerase PAPD7-like isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 109955849 papd5; non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 109971724 papd7; non-canonical poly(A) RNA polymerase PAPD7 isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 109974146 zcchc7; zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
E 109972309 skiv2l2; superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 109958622 skiv2l; helicase SKI2W K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 109956929 ttc37; tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3
E 109972313 wdr61; WD repeat-containing protein 61 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 109957331 cnot6l; CCR4-NOT transcription complex subunit 6-like K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 109973146 cnot6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 109962521 cnot1; CCR4-NOT transcription complex subunit 1 isoform X1 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 109967889 CCR4-NOT transcription complex subunit 2 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 109967706 cnot2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 109968885 CCR4-NOT transcription complex subunit 3-like K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 109970197 cnot3; CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 109973034 cnot4; CCR4-NOT transcription complex subunit 4 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 109957528 CCR4-NOT transcription complex subunit 7 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109952160 cnot8; CCR4-NOT transcription complex subunit 8 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 109972628 cnot9; cell differentiation protein RCD1 homolog isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 109973037 cnot10; CCR4-NOT transcription complex subunit 10 isoform X1 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 109970328 pan2; PAB-dependent poly(A)-specific ribonuclease subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 109960159 pan3; PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 109973316 parn; poly(A)-specific ribonuclease PARN K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 109968984 dhx36; LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 109952645 tob2; protein Tob2 K14443 TOB; protein Tob/BTG
E 109964920 protein BTG4-like K14443 TOB; protein Tob/BTG
E 109952303 protein Tob1-like K14443 TOB; protein Tob/BTG
E 109959845 btg1; protein BTG1 K14443 TOB; protein Tob/BTG
E 109959182 maternal B9.10 protein-like K14443 TOB; protein Tob/BTG
E 109967056 btg3; protein BTG3 K14443 TOB; protein Tob/BTG
E 109969517 LOW QUALITY PROTEIN: protein Tob1-like K14443 TOB; protein Tob/BTG
E 109957867 nocturnin-like K18764 NOCT; nocturnin [EC:3.1.3.108]
E 109966424 noct; nocturnin K18764 NOCT; nocturnin [EC:3.1.3.108]
E 109964929 eri1; 3'-5' exoribonuclease 1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 109973320 eri2; ERI1 exoribonuclease 2 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 109957539 dcps; m7GpppX diphosphatase K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 109966356 pde12; 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 109972251 ireb2; LOW QUALITY PROTEIN: iron-responsive element-binding protein 2 K22416 IREB2; iron-responsive element-binding protein 2
E 109972003 helz; LOW QUALITY PROTEIN: probable helicase with zinc finger domain K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 109969090 helz2; helicase with zinc finger domain 2 isoform X1 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 109972830 nrde2; protein NRDE2 homolog K26109 NRDE2; nuclear exosome regulator NRDE2
E 109974793 samd4a; LOW QUALITY PROTEIN: protein Smaug homolog 1 K27396 SMG; protein Smaug
E 109968519 samd4b; protein Smaug homolog 2 K27396 SMG; protein Smaug
E 109957207 focad; focadhesin K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 109954604 zc3h12a; endoribonuclease ZC3H12A K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 109955686 probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 109958568 ribonuclease ZC3H12A-like K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 109959468 zc3h12b; probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 109968073 zc3h12d; probable ribonuclease ZC3H12D K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 109970966 endoribonuclease ZC3H12A-like K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 109962215 drosha; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 109972697 rexo2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 109959072 enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109952449 beta-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109968883 gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109966147 eno2; gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109970496 eno1; alpha-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 109961890 LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 1, mitochondrial-like K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 109961188 pnpt1; polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 109956115 ATP-dependent 6-phosphofructokinase, muscle type-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109957147 pfkl; ATP-dependent 6-phosphofructokinase, liver type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109965124 ATP-dependent 6-phosphofructokinase, platelet type-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109967100 ATP-dependent 6-phosphofructokinase, platelet type-like K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 109971225 ATP-dependent 6-phosphofructokinase, muscle type-like isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 109966420 hspa9; stress-70 protein, mitochondrial K04043 dnaK; molecular chaperone DnaK
E 109972694 hspd1; 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 109960681 exosc2; exosome complex component RRP4 K03679 RRP4; exosome complex component RRP4
E 109957813 exosc1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 109957689 exosc4; exosome complex component RRP41 K11600 RRP41; exosome complex component RRP41
E 109958739 exosc7; exosome complex component RRP42 K12589 RRP42; exosome complex component RRP42
D Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024