+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Mariniflexile sp. TRM1-10

% ! ACRISPR-Cas system B Universal Cas proteins B Type I CRISPR-Cas system C Type I signiture cas proteins C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C CJ739_3156 Type I restriction enzyme EcoR124II R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C CJ739_3696 Type I restriction enzyme EcoR124II R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C CJ739_3623 Type-1 restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C CJ739_629 Type-1 restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C CJ739_3161 Type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C CJ739_3694 Putative type-1 restriction enzyme specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C CJ739_631 EcoKI restriction-modification system protein HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C CJ739_632 Putative type-1 restriction enzyme specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C CJ739_3624 EcoKI restriction-modification system protein HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C CJ739_3162 Type I restriction enzyme EcoKI M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C CJ739_3626 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C CJ739_3693 Type I restriction enzyme EcoKI M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C CJ739_633 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D CJ739_2023 Type IIS restriction enzyme Eco57I K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type III R-M system B Type IV R-M system C CJ739_3073 5-methylcytosine-specific restriction enzyme B K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] C CJ739_3072 5-methylcytosine-specific restriction enzyme subunit McrC K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM D CJ739_1513 Toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-] D CJ739_1514 Antitoxin YefM K19159 yefM; antitoxin YefM C HipA-HipB D CJ739_3022 Serine/threonine-protein kinase HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CJ739_3025 putative DNA-binding transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD D CJ739_3864 Toxin ParE1 K19092 parE1_3_4; toxin ParE1/3/4 D CJ739_1277 Toxin ParE1 K19092 parE1_3_4; toxin ParE1/3/4 D CJ739_3863 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4 D CJ739_1276 Antitoxin ParD1 K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd D CJ739_827 Toxin Doc K07341 doc; death on curing protein C HigB-HigA D CJ739_2299 mRNA interferase HigB K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D CJ739_2298 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D CJ739_726 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CJ739_2186 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CJ739_3996 DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CJ739_3998 DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CJ739_1521 Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C CJ739_2931 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023