+D Transcription factors KO #

  Transcription Factors - Marinobacter sp. CP1

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Stork head/winged helix factors C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG TOX C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C NAC C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D ACP86_15620 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D ACP86_06375 cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D ACP86_04140 AraC family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator C LysR family D ACP86_08335 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ACP86_18185 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D ACP86_13400 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D ACP86_18745 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D ACP86_20740 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D ACP86_12665 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D ACP86_15450 LysR family transcriptional regulator K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D ACP86_21645 cysB; CysB family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D ACP86_19385 hypothetical protein K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D ACP86_12125 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D ACP86_11965 transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D ACP86_13640 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family D ACP86_00975 transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D ACP86_09205 transcriptional regulator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D ACP86_07160 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D ACP86_10970 pdhR; transcriptional regulator PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D ACP86_05635 GntR family transcriptional regulator K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D ACP86_04085 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D ACP86_08580 BetI family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D ACP86_06370 transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D ACP86_06885 TetR family transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator D ACP86_06330 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D ACP86_19945 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D ACP86_00375 transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D ACP86_04950 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D ACP86_08445 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D ACP86_03010 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D ACP86_20325 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator C Lrp/AsnC family D ACP86_00430 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ACP86_03665 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D ACP86_15410 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D ACP86_02460 LuxR family transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D ACP86_20390 transcriptional regulator K21748 alkS; LuxR family transcriptional regulator, alkane degradation pathway regulator C MarR family D ACP86_09835 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D ACP86_19905 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D ACP86_20000 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin C MerR family D ACP86_03850 MerR family transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D ACP86_18845 MerR family transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D ACP86_03885 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D ACP86_08205 MerR family transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D ACP86_18955 MerR family transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA C Fur family D ACP86_05925 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D ACP86_08135 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D ACP86_11960 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D ACP86_19505 hypothetical protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein C CRP/FNR family D ACP86_07055 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D ACP86_14575 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D ACP86_16365 Crp/Fnr family transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D ACP86_05035 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator C Rrf2 family D ACP86_18445 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D ACP86_04965 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D ACP86_20185 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D ACP86_07525 arsenate reductase K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D ACP86_11785 ArsR family transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator C XRE family C PadR family C Other families D ACP86_01040 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D ACP86_11190 biotin K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D ACP86_12970 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D ACP86_06670 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D ACP86_19285 hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA D ACP86_01785 ATPase AAA K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D ACP86_00965 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D ACP86_11830 hypothetical protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D ACP86_11930 hypothetical protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D ACP86_07875 ATPase AAA K11908 vasH; sigma-54 dependent transcriptional regulator D ACP86_16025 Fis family transcriptional regulator K15836 fhlA; formate hydrogenlyase transcriptional activator D ACP86_17715 XRE family transcriptional regulator K07726 K07726; putative transcriptional regulator D ACP86_12055 Cro/Cl family transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D ACP86_03655 pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D ACP86_05020 ferredoxin K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D ACP86_09900 ferredoxin K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D ACP86_16815 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D ACP86_09030 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D ACP86_02370 transcriptional regulator K05785 rfaH; transcriptional antiterminator RfaH D ACP86_04185 hypothetical protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D ACP86_03755 phenylacetic acid degradation protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D ACP86_11330 hypothetical protein K06140 rnk; regulator of nucleoside diphosphate kinase D ACP86_08070 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D ACP86_05990 hypothetical protein K07733 alpA; prophage regulatory protein D ACP86_16400 hypothetical protein K07733 alpA; prophage regulatory protein D ACP86_17005 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D ACP86_17015 hypothetical protein K07733 alpA; prophage regulatory protein D ACP86_08080 hypothetical protein K07735 algH; putative transcriptional regulator D ACP86_00795 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D ACP86_12795 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D ACP86_13860 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D ACP86_14195 protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: October 1, 2025 #
Classification taken and modified from TRANSFAC 7.0