+E Ribosome biogenesis KO
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Ribosome Biogenesis - Moraxella catarrhalis 25239
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D MC25239_01616 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D MC25239_00641 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C MC25239_01615 era; GTP-binding protein Era K03595 era; GTPase
C MC25239_01188 obg; GTP-binding protein obg K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C MC25239_00387 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C MC25239_00099 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C MC25239_01681 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
C MC25239_01704 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
C MC25239_00280 nusG; Transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D MC25239_00097 rsuA; Ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D MC25239_01021 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D MC25239_00033 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D MC25239_00025 rsmC; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D MC25239_01204 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D MC25239_00664 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D MC25239_01333 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D MC25239_00823 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D MC25239_01692 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D MC25239_00500 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D MC25239_01302 rsmJ; Ribosomal RNA small subunit methyltransferase J K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
C 23S rRNA modification factors
D MC25239_01596 rlmA; Ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D MC25239_00060 rlmB_1; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D MC25239_00451 rlmE; Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D MC25239_01668 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D MC25239_00320 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D MC25239_01080 rlmL; Ribosomal RNA large subunit methyltransferase L K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D MC25239_01146 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D MC25239_00181 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D MC25239_00100 rluA_1; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D MC25239_01654 rluA_2; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D MC25239_00853 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D MC25239_01545 rluC; Ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D MC25239_01038 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D MC25239_01431 rluE; Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
B ribosomal protein modification factors
C MC25239_01414 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C MC25239_00305 ydaF; Putative ribosomal N-acetyltransferase YdaF K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
C MC25239_00407 rimM; Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
C MC25239_00710 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C MC25239_00614 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
C MC25239_01147 prmB; 50S ribosomal protein L3 glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
C MC25239_01148 hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
B rRNA processing factors
C MC25239_01616 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
C MC25239_01546 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
C MC25239_01517 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
C MC25239_01756 yqgF; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C MC25239_01615 era; GTP-binding protein Era K03595 era; GTPase
C MC25239_01227 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C MC25239_01139 der; GTP-binding protein EngA K03977 engA; GTPase
C MC25239_01188 obg; GTP-binding protein obg K03979 obgE; GTPase [EC:3.6.5.-]
C MC25239_00662 hflX; GTP-binding protein HflX K03665 hflX; GTPase
B Other maturation factors
C MC25239_00030 rimN; t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C MC25239_00372 spoT; Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C MC25239_01677 rbfA; RbfA protein K02834 rbfA; ribosome-binding factor A
C MC25239_01682 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
C MC25239_00196 hypothetical protein K09710 ybeB; ribosome-associated protein
C MC25239_00844 putative rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
C MC25239_00450 RNA-binding protein K07574 yhbY; RNA-binding protein
C MC25239_01737 hypothetical protein K09889 yjgA; ribosome-associated protein
C MC25239_00836 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
C MC25239_01487 hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2024