+E	Ribosome biogenesis	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Ribosome Biogenesis - Mycoplasma crocodyli</h2>
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A<b>Eukaryotic type</b>
B  Sno RNPs
C    Box C/D snoRNPs
C    Box H/ACA snoRNPs
B  90S particles
C    U3 small nucleolar RNA-associated proteins
C    Helicases
C    GTPase
C    RNase
D      MCRO_0056 rnc; ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
C    Kinase
C    Other 90S particles
B  Pre-40S particles
C    Kinases
C    Export and cytoplasmic maturation factors
C    Other pre-40S particles
B  Pre-60S particles
C    Helicases
C    GTPases
C    RNases
D      RNase MRP
C    Kinases
C    Export and cytoplasmic maturation factors
C    5-FMC complex
C    Ribosome quality control proteins
C    Other pre-60S particles
B  Other ribosome biogenesis factors
C    MCRO_0112 era; GTP-binding protein Era	K03595 era; GTPase 
C    MCRO_0493 putative rRNA maturation-associated GTP-binding protein	K03979 obgE; GTPase [EC:3.6.5.-] 
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A<b>Prokaryotic type</b>
B  Sno RNPs
C    Box C/D snoRNPs
C    Box H/ACA snoRNPs
B  rRNA transcription factors
C    MCRO_0014 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA 
C    MCRO_0360 nusB; transcription anti-termination factor NusB	K03625 nusB; transcription antitermination protein NusB 
C    MCRO_0108 nusG; transcription anti-termination factor NusG	K02601 nusG; transcription termination/antitermination protein NusG 
B  rRNA modification factors
C    16S rRNA modification factors
D      MCRO_0613 rsuA; ribosomal small subunit pseudouridine synthase A	K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] 
D      MCRO_0009 ksgA; dimethyladenosine transferase	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] 
D      MCRO_0060 putative methyltransferase	K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] 
D      MCRO_0429 RNA methyltransferase, RsmE family	K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] 
D      MCRO_0012 gidB; S-adenosyl-L-methionine dependent methyltransferase	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] 
D      MCRO_0432 mraW; S-adenosyl-methyltransferase	K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] 
D      MCRO_0730 conserved hypothetical protein	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] 
C    23S rRNA modification factors
D      MCRO_0598 tRNA/rRNA methylase	K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] 
D      MCRO_0549 putative alpha/beta knot-forming protein	K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] 
D      MCRO_0637 hypothetical RNA methyltransferase	K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] 
D      MCRO_0454 rluB; ribosomal large subunit pseudouridine synthase B	K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] 
D      MCRO_0516 rluC; ribosomal large subunit pseudouridylate synthase C	K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] 
D      MCRO_0697 rluD; ribosomal large subunit pseudouridine synthase D	K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] 
B  ribosomal protein modification factors
B  rRNA processing factors
C    MCRO_0056 rnc; ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3] 
C    MCRO_0218 putative Holliday junction resolvase	K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] 
B  rRNA helicases
B  GTPases
C    MCRO_0112 era; GTP-binding protein Era	K03595 era; GTPase 
C    MCRO_0306 rsgA; ribosome small subunit-dependent GTPase A	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] 
C    MCRO_0660 engA; GTP-binding protein	K03977 engA; GTPase 
C    MCRO_0493 putative rRNA maturation-associated GTP-binding protein	K03979 obgE; GTPase [EC:3.6.5.-] 
C    MCRO_0066 putative GTP-binding protein	K14540 rbgA; ribosome biogenesis GTPase A 
B  Other maturation factors
C    MCRO_0241 SUA5-like translation suppressor	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] 
C    MCRO_0508 rbfA; ribosome-binding factor A	K02834 rbfA; ribosome-binding factor A 
C    MCRO_0003 conserved domain protein	K14761 rlbA; ribosome-associated protein 
C    MCRO_0114 conserved hypothetical metalloprotease	K07042 ybeY; probable rRNA maturation factor 
C    MCRO_0100 putative GTP-binding translation elongation factor EngD	K06942 ychF; ribosome-binding ATPase 
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A<b>Related small nucleolar RNAs</b>
B  Box C/D snoRNAs
C    SnoRNAs involved in processing reactions
C    SnoRNAs act as guides for 2'-O-ribose methylation
B  Box H/ACA snoRNAs
C    SnoRNAs involved in processing reactions
C    SnoRNAs act as guides for pseudouridynation
B  Other snoRNA
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#Last updated: April 22, 2024