+D	GENES	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a> &nbsp; KEGG Orthology (KO) - Mycoplasma cottewii </h2>
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A09100 Metabolism
B
B  09101 Carbohydrate metabolism
C    00010 Glycolysis / Gluconeogenesis [PATH:mcot00010]
D      NX779_03270 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NX779_01010 pfkA; 6-phosphofructokinase	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D      NX779_04275 fba; class II fructose-1,6-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NX779_00965 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      NX779_00985 gap; type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      NX779_00990 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      NX779_00975 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      NX779_02795 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NX779_01005 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      NX779_02605 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      NX779_02600 alpha-ketoacid dehydrogenase subunit beta	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      NX779_02595 2-oxo acid dehydrogenase subunit E2	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_00380 L-lactate dehydrogenase	K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D      NX779_00125 adhP; alcohol dehydrogenase AdhP	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      NX779_04095 phospho-sugar mutase	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NX779_01160 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D      NX779_02555 PTS glucose transporter subunit IIA	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      NX779_04130 PTS transporter subunit EIIC	K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D      NX779_00090 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_00095 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C    00020 Citrate cycle (TCA cycle) [PATH:mcot00020]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02605 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      NX779_02600 alpha-ketoacid dehydrogenase subunit beta	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      NX779_02595 2-oxo acid dehydrogenase subunit E2	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C    00030 Pentose phosphate pathway [PATH:mcot00030]
D      NX779_03270 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NX779_02915 rpe; ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D      NX779_01340 tkt; transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      NX779_00605 rpiB; ribose 5-phosphate isomerase B	K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D      NX779_04090 deoC; deoxyribose-phosphate aldolase	K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D      NX779_04095 phospho-sugar mutase	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NX779_00370 ribose-phosphate diphosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      NX779_01160 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D      NX779_04275 fba; class II fructose-1,6-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NX779_01010 pfkA; 6-phosphofructokinase	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C    00040 Pentose and glucuronate interconversions
D      NX779_02915 rpe; ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C    00051 Fructose and mannose metabolism [PATH:mcot00051]
D      NX779_03205 mannose-6-phosphate isomerase	K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D      NX779_01010 pfkA; 6-phosphofructokinase	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D      NX779_01270 srlD; sorbitol-6-phosphate dehydrogenase	K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D      NX779_04275 fba; class II fructose-1,6-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NX779_00965 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      NX779_00605 rpiB; ribose 5-phosphate isomerase B	K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D      NX779_01265 PTS transporter subunit EIIC	K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C    00052 Galactose metabolism [PATH:mcot00052]
D      NX779_04095 phospho-sugar mutase	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NX779_01010 pfkA; 6-phosphofructokinase	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D      NX779_03690 alpha-glucosidase	K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C    00053 Ascorbate and aldarate metabolism
C    00500 Starch and sucrose metabolism [PATH:mcot00500]
D      NX779_03730 glycoside hydrolase family 13 protein	K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D      NX779_03750 glycoside hydrolase family 13 protein	K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D      NX779_03755 glycoside hydrolase family 13 protein	K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D      NX779_03760 glycoside hydrolase family 13 protein	K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D      NX779_03690 alpha-glucosidase	K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D      NX779_03695 glycoside hydrolase family 65 protein	K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D      NX779_03745 pgmB; beta-phosphoglucomutase	K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D      NX779_02555 PTS glucose transporter subunit IIA	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      NX779_00090 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_00095 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_04095 phospho-sugar mutase	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NX779_03270 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C    00520 Amino sugar and nucleotide sugar metabolism [PATH:mcot00520]
D      NX779_02555 PTS glucose transporter subunit IIA	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      NX779_01505 nagA; N-acetylglucosamine-6-phosphate deacetylase	K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D      NX779_02025 nagB; glucosamine-6-phosphate deaminase	K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D      NX779_02015 N-acetylmannosamine-6-phosphate 2-epimerase	K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D      NX779_01515 N-acetylneuraminate lyase	K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D      NX779_04130 PTS transporter subunit EIIC	K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D      NX779_00090 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_00095 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_04095 phospho-sugar mutase	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NX779_03270 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NX779_03205 mannose-6-phosphate isomerase	K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C    00620 Pyruvate metabolism [PATH:mcot00620]
D      NX779_02605 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      NX779_02600 alpha-ketoacid dehydrogenase subunit beta	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      NX779_02595 2-oxo acid dehydrogenase subunit E2	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_00125 adhP; alcohol dehydrogenase AdhP	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D      NX779_02580 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      NX779_02585 pta; phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NX779_01005 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      NX779_00380 L-lactate dehydrogenase	K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C    00630 Glyoxylate and dicarboxylate metabolism [PATH:mcot00630]
D      NX779_00610 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00640 Propanoate metabolism [PATH:mcot00640]
D      NX779_02580 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      NX779_02585 pta; phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_00380 L-lactate dehydrogenase	K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C    00650 Butanoate metabolism
C    00660 C5-Branched dibasic acid metabolism
C    00562 Inositol phosphate metabolism
D      NX779_00965 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B  09102 Energy metabolism
C    00190 Oxidative phosphorylation [PATH:mcot00190]
D      NX779_03520 ATP F0F1 synthase subunit alpha	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      NX779_00650 atpA; F0F1 ATP synthase subunit alpha	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      NX779_00660 atpD; F0F1 ATP synthase subunit beta	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      NX779_03515 F0F1 ATP synthase subunit beta	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      NX779_00655 atpG; ATP synthase F1 subunit gamma	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      NX779_00645 F0F1 ATP synthase subunit delta	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      NX779_00665 F0F1 ATP synthase subunit epsilon	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      NX779_00630 F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      NX779_00640 atpF; F0F1 ATP synthase subunit B	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      NX779_00635 atpE; ATP synthase F0 subunit C	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      NX779_01600 inorganic diphosphatase	K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C    00195 Photosynthesis
C    00196 Photosynthesis - antenna proteins
C    00710 Carbon fixation by Calvin cycle [PATH:mcot00710]
D      NX779_00990 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      NX779_00985 gap; type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      NX779_04275 fba; class II fructose-1,6-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NX779_01340 tkt; transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D      NX779_00605 rpiB; ribose 5-phosphate isomerase B	K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D      NX779_00965 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      NX779_02915 rpe; ribulose-phosphate 3-epimerase	K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C    00720 Other carbon fixation pathways [PATH:mcot00720]
D      NX779_00865 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      NX779_02585 pta; phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NX779_02580 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
C    00680 Methane metabolism [PATH:mcot00680]
D      NX779_00610 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NX779_02795 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NX779_04275 fba; class II fructose-1,6-bisphosphate aldolase	K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D      NX779_01010 pfkA; 6-phosphofructokinase	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D      NX779_02580 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
D      NX779_02585 pta; phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NX779_00975 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C    00910 Nitrogen metabolism
C    00920 Sulfur metabolism
D      NX779_01690 bifunctional oligoribonuclease/PAP phosphatase NrnA	K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D      NX779_04260 bifunctional oligoribonuclease/PAP phosphatase NrnA	K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B  09103 Lipid metabolism
C    00061 Fatty acid biosynthesis
D      NX779_03645 phosphopantetheine-binding protein	K02078 acpP; acyl carrier protein
C    00062 Fatty acid elongation
C    00071 Fatty acid degradation
D      NX779_00125 adhP; alcohol dehydrogenase AdhP	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C    00073 Cutin, suberine and wax biosynthesis
C    00100 Steroid biosynthesis
C    00120 Primary bile acid biosynthesis
C    00121 Secondary bile acid biosynthesis
C    00140 Steroid hormone biosynthesis
C    00561 Glycerolipid metabolism [PATH:mcot00561]
D      NX779_03365 glpK; glycerol kinase GlpK	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      NX779_02940 plsX; phosphate acyltransferase PlsX	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      NX779_01365 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      NX779_03355 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      NX779_00615 sulfatase-like hydrolase/transferase	K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C    00564 Glycerophospholipid metabolism [PATH:mcot00564]
D      NX779_02220 glycerol-3-phosphate dehydrogenase	K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D      NX779_03360 glpO; type 2 glycerol-3-phosphate oxidase	K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D      NX779_01365 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      NX779_03355 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D      NX779_00180 glycerophosphodiester phosphodiesterase	K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D      NX779_01105 phosphatidate cytidylyltransferase	K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D      NX779_04355 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D      NX779_04210 cls; cardiolipin synthase	K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C    00565 Ether lipid metabolism
C    00600 Sphingolipid metabolism
C    00590 Arachidonic acid metabolism
C    00591 Linoleic acid metabolism
C    00592 alpha-Linolenic acid metabolism
C    01040 Biosynthesis of unsaturated fatty acids
B
B  09104 Nucleotide metabolism
C    00230 Purine metabolism [PATH:mcot00230]
D      NX779_04095 phospho-sugar mutase	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D      NX779_00370 ribose-phosphate diphosphokinase	K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D      NX779_00595 purB; adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D      NX779_01845 adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      NX779_04115 purine-nucleoside phosphorylase	K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D      NX779_02805 hpt; hypoxanthine phosphoribosyltransferase	K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D      NX779_02810 hpt; hypoxanthine phosphoribosyltransferase	K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D      NX779_01640 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D      NX779_03395 gmk; guanylate kinase	K00942 gmk; guanylate kinase [EC:2.7.4.8]
D      NX779_00745 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NX779_00735 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      NX779_01850 RelA/SpoT family protein	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      NX779_00590 adenylosuccinate synthase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      NX779_01960 deoxynucleoside kinase	K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D      NX779_03185 TIGR00282 family metallophosphoesterase	K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D      NX779_03870 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
C    00240 Pyrimidine metabolism [PATH:mcot00240]
D      NX779_01290 pyrH; UMP kinase	K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D      NX779_04285 CTP synthase	K01937 pyrG; CTP synthase [EC:6.3.4.2]
D      NX779_02230 cmk; (d)CMP kinase	K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D      NX779_01545 udk; uridine kinase	K00876 udk; uridine kinase [EC:2.7.1.48]
D      NX779_00620 upp; uracil phosphoribosyltransferase	K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D      NX779_03185 TIGR00282 family metallophosphoesterase	K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D      NX779_03675 thymidine phosphorylase	K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D      NX779_04100 thymidine phosphorylase	K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D      NX779_03875 cdd; cytidine deaminase	K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D      NX779_00745 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NX779_00735 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      NX779_01960 deoxynucleoside kinase	K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D      NX779_03340 dCMP deaminase family protein	K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D      NX779_04440 tmk; dTMP kinase	K00943 tmk; dTMP kinase [EC:2.7.4.9]
D      NX779_04255 thymidine kinase	K00857 tdk; thymidine kinase [EC:2.7.1.21]
D      NX779_01985 thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B  09105 Amino acid metabolism
C    00250 Alanine, aspartate and glutamate metabolism [PATH:mcot00250]
D      NX779_00590 adenylosuccinate synthase	K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D      NX779_00595 purB; adenylosuccinate lyase	K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
C    00260 Glycine, serine and threonine metabolism [PATH:mcot00260]
D      NX779_00610 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NX779_00975 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00270 Cysteine and methionine metabolism [PATH:mcot00270]
D      NX779_04010 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D      NX779_03190 metK; methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      NX779_01940 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D      NX779_02835 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_03385 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_00380 L-lactate dehydrogenase	K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C    00280 Valine, leucine and isoleucine degradation [PATH:mcot00280]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00290 Valine, leucine and isoleucine biosynthesis
C    00300 Lysine biosynthesis
D      NX779_01245 M20 family metallopeptidase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C    00310 Lysine degradation
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00220 Arginine biosynthesis
C    00330 Arginine and proline metabolism
C    00340 Histidine metabolism
C    00350 Tyrosine metabolism
D      NX779_00125 adhP; alcohol dehydrogenase AdhP	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C    00360 Phenylalanine metabolism
C    00380 Tryptophan metabolism
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B  09106 Metabolism of other amino acids
C    00410 beta-Alanine metabolism
C    00430 Taurine and hypotaurine metabolism [PATH:mcot00430]
D      NX779_02585 pta; phosphate acetyltransferase	K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D      NX779_02580 acetate kinase	K00925 ackA; acetate kinase [EC:2.7.2.1]
C    00440 Phosphonate and phosphinate metabolism
C    00450 Selenocompound metabolism [PATH:mcot00450]
D      NX779_04010 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D      NX779_03255 aminotransferase class V-fold PLP-dependent enzyme	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      NX779_02660 trxB; thioredoxin-disulfide reductase	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      NX779_00355 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C    00460 Cyanoamino acid metabolism
D      NX779_00610 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C    00470 D-Amino acid metabolism
C    00480 Glutathione metabolism [PATH:mcot00480]
D      NX779_00475 M17 family metallopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B
B  09107 Glycan biosynthesis and metabolism
C    00510 N-Glycan biosynthesis
C    00513 Various types of N-glycan biosynthesis
C    00512 Mucin type O-glycan biosynthesis
C    00515 Mannose type O-glycan biosynthesis
C    00514 Other types of O-glycan biosynthesis
C    00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C    00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C    00533 Glycosaminoglycan biosynthesis - keratan sulfate
C    00531 Glycosaminoglycan degradation
C    00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C    00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C    00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C    00604 Glycosphingolipid biosynthesis - ganglio series
C    00511 Other glycan degradation
C    00540 Lipopolysaccharide biosynthesis
C    00542 O-Antigen repeat unit biosynthesis
C    00541 O-Antigen nucleotide sugar biosynthesis
D      NX779_03205 mannose-6-phosphate isomerase	K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C    00550 Peptidoglycan biosynthesis
C    00552 Teichoic acid biosynthesis [PATH:mcot00552]
D      NX779_00615 sulfatase-like hydrolase/transferase	K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C    00571 Lipoarabinomannan (LAM) biosynthesis
C    00572 Arabinogalactan biosynthesis - Mycobacterium
C    00543 Exopolysaccharide biosynthesis
B
B  09108 Metabolism of cofactors and vitamins
C    00730 Thiamine metabolism [PATH:mcot00730]
D      NX779_03435 thiI; tRNA 4-thiouridine(8) synthase ThiI	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D      NX779_02910 rsgA; ribosome small subunit-dependent GTPase A	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      NX779_03870 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
C    00740 Riboflavin metabolism [PATH:mcot00740]
D      NX779_00430 Cof-type HAD-IIB family hydrolase	K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D      NX779_01385 riboflavin kinase	K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D      NX779_01470 FAD synthetase family protein	K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C    00750 Vitamin B6 metabolism
C    00760 Nicotinate and nicotinamide metabolism [PATH:mcot00760]
D      NX779_03600 nicotinate phosphoribosyltransferase	K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D      NX779_04115 purine-nucleoside phosphorylase	K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D      NX779_01920 nadE; NAD(+) synthase	K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D      NX779_04385 isochorismatase family protein	K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D      NX779_02510 NAD(+) kinase	K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C    00770 Pantothenate and CoA biosynthesis [PATH:mcot00770]
D      NX779_02565 coaD; pantetheine-phosphate adenylyltransferase	K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D      NX779_01415 coaE; dephospho-CoA kinase	K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D      NX779_03345 4'-phosphopantetheinyl transferase superfamily protein	K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C    00780 Biotin metabolism
C    00785 Lipoic acid metabolism [PATH:mcot00785]
D      NX779_02610 lipoate--protein ligase	K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D      NX779_04075 lipoate--protein ligase	K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02605 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      NX779_02600 alpha-ketoacid dehydrogenase subunit beta	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      NX779_02595 2-oxo acid dehydrogenase subunit E2	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C    00790 Folate biosynthesis [PATH:mcot00790]
D      NX779_01820 Nif3-like dinuclear metal center hexameric protein	K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D      NX779_03350 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      NX779_00715 Mur ligase family protein	K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C    00670 One carbon pool by folate [PATH:mcot00670]
D      NX779_03350 dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      NX779_00865 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase	K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D      NX779_00610 serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      NX779_01720 fmt; methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      NX779_01985 thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D      NX779_03265 5-formyltetrahydrofolate cyclo-ligase	K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C    00830 Retinol metabolism
C    00860 Porphyrin metabolism
C    00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B  09109 Metabolism of terpenoids and polyketides
C    00900 Terpenoid backbone biosynthesis
C    00902 Monoterpenoid biosynthesis
C    00909 Sesquiterpenoid and triterpenoid biosynthesis
C    00904 Diterpenoid biosynthesis
C    00906 Carotenoid biosynthesis
C    00905 Brassinosteroid biosynthesis
C    00981 Insect hormone biosynthesis
C    00908 Zeatin biosynthesis
C    00903 Limonene degradation
C    00907 Pinene, camphor and geraniol degradation
C    01052 Type I polyketide structures
C    00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C    01051 Biosynthesis of ansamycins
D      NX779_01340 tkt; transketolase	K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C    01059 Biosynthesis of enediyne antibiotics
C    01056 Biosynthesis of type II polyketide backbone
C    01057 Biosynthesis of type II polyketide products
C    00253 Tetracycline biosynthesis
C    00523 Polyketide sugar unit biosynthesis
C    01054 Nonribosomal peptide structures
C    01053 Biosynthesis of siderophore group nonribosomal peptides
C    01055 Biosynthesis of vancomycin group antibiotics
B
B  09110 Biosynthesis of other secondary metabolites
C    00940 Phenylpropanoid biosynthesis
C    00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C    00941 Flavonoid biosynthesis
C    00944 Flavone and flavonol biosynthesis
C    00942 Anthocyanin biosynthesis
C    00943 Isoflavonoid biosynthesis
C    00946 Degradation of flavonoids
C    00901 Indole alkaloid biosynthesis
C    00403 Indole diterpene alkaloid biosynthesis
C    00950 Isoquinoline alkaloid biosynthesis
C    00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C    00996 Biosynthesis of various alkaloids
C    00232 Caffeine metabolism
C    00965 Betalain biosynthesis
C    00966 Glucosinolate biosynthesis
C    00402 Benzoxazinoid biosynthesis
C    00311 Penicillin and cephalosporin biosynthesis
C    00332 Carbapenem biosynthesis
C    00261 Monobactam biosynthesis
C    00331 Clavulanic acid biosynthesis
C    00521 Streptomycin biosynthesis
D      NX779_04095 phospho-sugar mutase	K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C    00524 Neomycin, kanamycin and gentamicin biosynthesis
C    00525 Acarbose and validamycin biosynthesis
C    00401 Novobiocin biosynthesis
C    00404 Staurosporine biosynthesis
C    00405 Phenazine biosynthesis
C    00333 Prodigiosin biosynthesis
C    00254 Aflatoxin biosynthesis
C    00998 Biosynthesis of various antibiotics
D      NX779_03645 phosphopantetheine-binding protein	K02078 acpP; acyl carrier protein
C    00999 Biosynthesis of various plant secondary metabolites
D      NX779_03190 metK; methionine adenosyltransferase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C    00997 Biosynthesis of various other secondary metabolites
B
B  09111 Xenobiotics biodegradation and metabolism
C    00362 Benzoate degradation
C    00627 Aminobenzoate degradation
C    00364 Fluorobenzoate degradation
C    00625 Chloroalkane and chloroalkene degradation [PATH:mcot00625]
D      NX779_00125 adhP; alcohol dehydrogenase AdhP	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C    00361 Chlorocyclohexane and chlorobenzene degradation
C    00623 Toluene degradation
C    00622 Xylene degradation
C    00633 Nitrotoluene degradation
C    00642 Ethylbenzene degradation
C    00643 Styrene degradation
C    00791 Atrazine degradation
C    00930 Caprolactam degradation
C    00363 Bisphenol degradation
C    00621 Dioxin degradation
C    00626 Naphthalene degradation [PATH:mcot00626]
D      NX779_00125 adhP; alcohol dehydrogenase AdhP	K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C    00624 Polycyclic aromatic hydrocarbon degradation
C    00365 Furfural degradation
C    00984 Steroid degradation
C    00980 Metabolism of xenobiotics by cytochrome P450
C    00982 Drug metabolism - cytochrome P450
C    00983 Drug metabolism - other enzymes
B
B  09112 Not included in regular maps
C    09113 Global maps only
#
A09120 Genetic Information Processing
B
B  09121 Transcription
C    03020 RNA polymerase [PATH:mcot03020]
D      NX779_00580 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      NX779_00585 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      NX779_03840 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      NX779_04290 rpoE; DNA-directed RNA polymerase subunit delta	K03048 rpoE; DNA-directed RNA polymerase subunit delta
C    03022 Basal transcription factors
C    03040 Spliceosome
B
B  09122 Translation
C    03010 Ribosome [PATH:mcot03010]
D      NX779_01250 rpsB; 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      NX779_03945 rpsC; 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      NX779_03585 rpsD; 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      NX779_00480 rpsF; 30S ribosomal protein S6	K02990 RP-S6; small subunit ribosomal protein S6
D      NX779_00450 rpsG; 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      NX779_03905 rpsH; 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      NX779_03785 rpsI; 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      NX779_03980 rpsJ; 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      NX779_03845 rpsK; 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      NX779_00445 rpsL; 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      NX779_03850 rpsM; 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      NX779_03910 type Z 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      NX779_02330 rpsO; 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      NX779_02145 rpsP; 30S ribosomal protein S16	K02959 RP-S16; small subunit ribosomal protein S16
D      NX779_03930 rpsQ; 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      NX779_00490 rpsR; 30S ribosomal protein S18	K02963 RP-S18; small subunit ribosomal protein S18
D      NX779_03955 rpsS; 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      NX779_01440 rpsT; 30S ribosomal protein S20	K02968 RP-S20; small subunit ribosomal protein S20
D      NX779_01305 rpsU; 30S ribosomal protein S21	K02970 RP-S21; small subunit ribosomal protein S21
D      NX779_00545 rplA; 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      NX779_03960 rplB; 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      NX779_03975 rplC; 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      NX779_03970 rplD; 50S ribosomal protein L4	K02926 RP-L4; large subunit ribosomal protein L4
D      NX779_03915 rplE; 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      NX779_03900 rplF; 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      NX779_00570 rplL; 50S ribosomal protein L7/L12	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      NX779_00495 rplI; 50S ribosomal protein L9	K02939 RP-L9; large subunit ribosomal protein L9
D      NX779_00565 rplJ; 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      NX779_00540 rplK; 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      NX779_03790 rplM; 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      NX779_03925 rplN; 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      NX779_03885 rplO; 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      NX779_03940 rplP; 50S ribosomal protein L16	K02878 RP-L16; large subunit ribosomal protein L16
D      NX779_03835 rplQ; 50S ribosomal protein L17	K02879 RP-L17; large subunit ribosomal protein L17
D      NX779_03895 rplR; 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      NX779_02160 rplS; 50S ribosomal protein L19	K02884 RP-L19; large subunit ribosomal protein L19
D      NX779_02540 rplT; 50S ribosomal protein L20	K02887 RP-L20; large subunit ribosomal protein L20
D      NX779_03295 rplU; 50S ribosomal protein L21	K02888 RP-L21; large subunit ribosomal protein L21
D      NX779_03950 rplV; 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      NX779_03965 rplW; 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      NX779_03920 rplX; 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      NX779_03305 rpmA; 50S ribosomal protein L27	K02899 RP-L27; large subunit ribosomal protein L27
D      NX779_03140 rpmB; 50S ribosomal protein L28	K02902 RP-L28; large subunit ribosomal protein L28
D      NX779_03935 rpmC; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      NX779_01205 rpmF; 50S ribosomal protein L32	K02911 RP-L32; large subunit ribosomal protein L32
D      NX779_00525 rpmG; 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      NX779_01095 rpmG; 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      NX779_04495 rpmH; 50S ribosomal protein L34	K02914 RP-L34; large subunit ribosomal protein L34
D      NX779_02545 rpmI; 50S ribosomal protein L35	K02916 RP-L35; large subunit ribosomal protein L35
D      NX779_03855 rpmJ; 50S ribosomal protein L36	K02919 RP-L36; large subunit ribosomal protein L36
C    00970 Aminoacyl-tRNA biosynthesis [PATH:mcot00970]
D      NX779_00930 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      NX779_00920 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      NX779_00955 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      NX779_01075 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      NX779_00950 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      NX779_00960 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      NX779_00925 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
D      NX779_04300 gltX; glutamate--tRNA ligase	K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D      NX779_00840 aspartyl/glutamyl-tRNA amidotransferase subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      NX779_00845 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      NX779_00835 aspartyl/glutamyl-tRNA amidotransferase subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      NX779_00295 alaS; alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      NX779_02400 aspS; aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      NX779_00775 asnS; asparagine--tRNA ligase	K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D      NX779_01795 glycine--tRNA ligase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      NX779_02755 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      NX779_00220 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      NX779_00515 cysS; cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      NX779_00355 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      NX779_01720 fmt; methionyl-tRNA formyltransferase	K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D      NX779_02060 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      NX779_03685 leuS; leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      NX779_03320 ileS; isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      NX779_00325 lysS; lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      NX779_01300 argS; arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      NX779_02850 proS; proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      NX779_02405 hisS; histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      NX779_01190 pheS; phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      NX779_01195 pheT; phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      NX779_03595 tyrS; tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      NX779_02525 trpS; tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C    03013 Nucleocytoplasmic transport
C    03015 mRNA surveillance pathway
C    03008 Ribosome biogenesis in eukaryotes
B
B  09123 Folding, sorting and degradation
C    03060 Protein export [PATH:mcot03060]
D      NX779_03880 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      NX779_02715 secG; preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      NX779_04485 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      NX779_00690 secA; preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      NX779_02135 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      NX779_03175 ftsY; signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      NX779_03325 signal peptidase II	K03101 lspA; signal peptidase II [EC:3.4.23.36]
C    04141 Protein processing in endoplasmic reticulum
C    04130 SNARE interactions in vesicular transport
C    04120 Ubiquitin mediated proteolysis
C    04122 Sulfur relay system [PATH:mcot04122]
D      NX779_01700 mnmA; tRNA 2-thiouridine(34) synthase MnmA	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      NX779_03435 thiI; tRNA 4-thiouridine(8) synthase ThiI	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C    03050 Proteasome
C    03018 RNA degradation [PATH:mcot03018]
D      NX779_02795 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NX779_02720 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      NX779_02130 rny; ribonuclease Y	K18682 rny; ribonucrease Y [EC:3.1.-.-]
D      NX779_02495 ribonuclease J	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      NX779_02890 ribonuclease J	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      NX779_01010 pfkA; 6-phosphofructokinase	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D      NX779_01680 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
B
B  09124 Replication and repair
C    03030 DNA replication [PATH:mcot03030]
D      NX779_03430 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NX779_01110 PolC-type DNA polymerase III	K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D      NX779_04450 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NX779_04435 DNA polymerase III subunit delta	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      NX779_01435 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NX779_00010 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NX779_00500 dnaB; replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      NX779_01805 toprim domain-containing protein	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      NX779_00485 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_03055 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_02170 ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      NX779_03425 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NX779_00830 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03410 Base excision repair [PATH:mcot03410]
D      NX779_03210 uracil-DNA glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D      NX779_03420 mutM; DNA-formamidopyrimidine glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      NX779_01390 deoxyribonuclease IV	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D      NX779_03425 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NX779_00830 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03420 Nucleotide excision repair [PATH:mcot03420]
D      NX779_00710 uvrA; excinuclease ABC subunit UvrA	K03701 uvrA; excinuclease ABC subunit A
D      NX779_00705 uvrB; excinuclease ABC subunit UvrB	K03702 uvrB; excinuclease ABC subunit B
D      NX779_02480 uvrC; excinuclease ABC subunit UvrC	K03703 uvrC; excinuclease ABC subunit C
D      NX779_00795 UvrD-helicase domain-containing protein	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      NX779_03425 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NX779_00830 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03430 Mismatch repair [PATH:mcot03430]
D      NX779_00795 UvrD-helicase domain-containing protein	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      NX779_01405 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      NX779_01410 xseB; exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      NX779_00485 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_03055 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_03430 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NX779_01110 PolC-type DNA polymerase III	K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D      NX779_00010 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NX779_04450 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NX779_01435 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NX779_04435 DNA polymerase III subunit delta	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      NX779_00830 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C    03440 Homologous recombination [PATH:mcot03440]
D      NX779_00485 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_03055 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_01785 recO; DNA repair protein RecO	K03584 recO; DNA repair protein RecO (recombination protein O)
D      NX779_04445 recR; recombination mediator RecR	K06187 recR; recombination protein RecR
D      NX779_02180 recA; recombinase RecA	K03553 recA; recombination protein RecA
D      NX779_03425 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NX779_01310 helix-hairpin-helix domain-containing protein	K03550 ruvA; holliday junction DNA helicase RuvA
D      NX779_01315 ruvB; Holliday junction branch migration DNA helicase RuvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      NX779_02315 AAA family ATPase	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      NX779_03430 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NX779_01110 PolC-type DNA polymerase III	K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D      NX779_00010 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NX779_04450 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NX779_01435 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NX779_04435 DNA polymerase III subunit delta	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
C    03450 Non-homologous end-joining
C    03460 Fanconi anemia pathway
B
B  09126 Chromosome
C    03082 ATP-dependent chromatin remodeling
C    03083 Polycomb repressive complex
B
B  09125 Information processing in viruses
C    03230 Viral genome structure
C    03240 Viral replication
C    03250 Viral life cycle - HIV-1
C    03260 Virion - Human immunodeficiency virus
C    03271 Virion - Rotavirus
C    03262 Virion - Coronavirus
C    03261 Virion - Influenza virus
C    03263 Virion - Enterovirus
C    03264 Virion - Flavivirus
C    03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C    03266 Virion - Herpesvirus
C    03268 Virion - Orthopoxvirus
C    03267 Virion - Adenovirus
C    03259 Virion - Bacteriophages T4 and T7
C    03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B  09131 Membrane transport
C    02010 ABC transporters [PATH:mcot02010]
D      NX779_03990 extracellular solute-binding protein	K11070 potC; spermidine/putrescine transport system permease protein
D      NX779_03995 ABC transporter permease	K11071 potB; spermidine/putrescine transport system permease protein
D      NX779_04000 ABC transporter ATP-binding protein	K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D      NX779_02685 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      NX779_03700 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      NX779_00905 ABC transporter permease	K23535 nupB; general nucleoside transport system permease protein
D      NX779_00910 ABC transporter permease	K23536 nupC; general nucleoside transport system permease protein
D      NX779_00900 ABC transporter ATP-binding protein	K23537 nupA; general nucleoside transport system ATP-binding protein
D      NX779_03155 ptsS; phosphate ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      NX779_03160 pstA; phosphate ABC transporter permease PstA	K02037 pstC; phosphate transport system permease protein
D      NX779_03165 pstB; phosphate ABC transporter ATP-binding protein PstB	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      NX779_02250 ABC transporter substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      NX779_04475 PhnD/SsuA/transferrin family substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      NX779_02240 ABC transporter permease subunit	K02042 phnE; phosphonate transport system permease protein
D      NX779_04465 ABC transporter permease subunit	K02042 phnE; phosphonate transport system permease protein
D      NX779_04470 phnC; phosphonate ABC transporter ATP-binding protein	K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D      NX779_00285 ABC transporter permease	K15581 oppB; oligopeptide transport system permease protein
D      NX779_00280 ABC transporter permease	K15582 oppC; oligopeptide transport system permease protein
D      NX779_00275 ATP-binding cassette domain-containing protein	K15583 oppD; oligopeptide transport system ATP-binding protein
D      NX779_00270 ATP-binding cassette domain-containing protein	K10823 oppF; oligopeptide transport system ATP-binding protein
D      NX779_03815 energy-coupling factor transporter transmembrane protein EcfT	K16785 ecfT; energy-coupling factor transport system permease protein
D      NX779_03825 energy-coupling factor transporter ATPase	K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D      NX779_03820 energy-coupling factor transporter ATPase	K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
C    02060 Phosphotransferase system (PTS) [PATH:mcot02060]
D      NX779_02560 ptsP; phosphoenolpyruvate--protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      NX779_00810 HPr family phosphocarrier protein	K02784 ptsH; phosphocarrier protein HPr
D      NX779_02555 PTS glucose transporter subunit IIA	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      NX779_04130 PTS transporter subunit EIIC	K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D      NX779_00090 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_00095 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_01265 PTS transporter subunit EIIC	K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C    03070 Bacterial secretion system [PATH:mcot03070]
D      NX779_02715 secG; preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      NX779_03880 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      NX779_04485 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      NX779_00690 secA; preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      NX779_03175 ftsY; signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      NX779_02135 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      NX779_03065 type IV secretory system conjugative DNA transfer family protein	K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B  09132 Signal transduction
C    02020 Two-component system [PATH:mcot02020]
D      NX779_03155 ptsS; phosphate ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      NX779_00005 dnaA; chromosomal replication initiator protein DnaA	K02313 dnaA; chromosomal replication initiator protein
C    04010 MAPK signaling pathway
C    04013 MAPK signaling pathway - fly
C    04016 MAPK signaling pathway - plant
C    04011 MAPK signaling pathway - yeast
C    04012 ErbB signaling pathway
C    04014 Ras signaling pathway
C    04015 Rap1 signaling pathway
C    04310 Wnt signaling pathway
C    04330 Notch signaling pathway
C    04340 Hedgehog signaling pathway
C    04341 Hedgehog signaling pathway - fly
C    04350 TGF-beta signaling pathway
C    04390 Hippo signaling pathway
C    04391 Hippo signaling pathway - fly
C    04392 Hippo signaling pathway - multiple species
C    04370 VEGF signaling pathway
C    04371 Apelin signaling pathway
C    04630 JAK-STAT signaling pathway
C    04064 NF-kappa B signaling pathway
C    04668 TNF signaling pathway
C    04066 HIF-1 signaling pathway
C    04068 FoxO signaling pathway
C    04020 Calcium signaling pathway
C    04070 Phosphatidylinositol signaling system
C    04072 Phospholipase D signaling pathway
C    04071 Sphingolipid signaling pathway
C    04024 cAMP signaling pathway
C    04022 cGMP-PKG signaling pathway
C    04151 PI3K-Akt signaling pathway
C    04152 AMPK signaling pathway
C    04150 mTOR signaling pathway
C    04075 Plant hormone signal transduction
B
B  09133 Signaling molecules and interaction
C    04080 Neuroactive ligand-receptor interaction
C    04060 Cytokine-cytokine receptor interaction
C    04061 Viral protein interaction with cytokine and cytokine receptor
C    04512 ECM-receptor interaction
C    04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B  09141 Transport and catabolism
C    04144 Endocytosis
C    04145 Phagosome
C    04142 Lysosome
C    04146 Peroxisome
C    04140 Autophagy - animal
C    04138 Autophagy - yeast
C    04136 Autophagy - other
C    04137 Mitophagy - animal
C    04139 Mitophagy - yeast
C    04148 Efferocytosis
B
B  09143 Cell growth and death
C    04110 Cell cycle
C    04111 Cell cycle - yeast
C    04112 Cell cycle - Caulobacter
C    04113 Meiosis - yeast
C    04114 Oocyte meiosis
C    04210 Apoptosis
C    04214 Apoptosis - fly
C    04215 Apoptosis - multiple species
C    04216 Ferroptosis
C    04217 Necroptosis
C    04115 p53 signaling pathway
C    04218 Cellular senescence
B
B  09144 Cellular community - eukaryotes
C    04510 Focal adhesion
C    04520 Adherens junction
C    04530 Tight junction
C    04540 Gap junction
C    04550 Signaling pathways regulating pluripotency of stem cells
B
B  09145 Cellular community - prokaryotes
C    02024 Quorum sensing [PATH:mcot02024]
D      NX779_00285 ABC transporter permease	K15581 oppB; oligopeptide transport system permease protein
D      NX779_00280 ABC transporter permease	K15582 oppC; oligopeptide transport system permease protein
D      NX779_00275 ATP-binding cassette domain-containing protein	K15583 oppD; oligopeptide transport system ATP-binding protein
D      NX779_00270 ATP-binding cassette domain-containing protein	K10823 oppF; oligopeptide transport system ATP-binding protein
D      NX779_04485 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
D      NX779_02715 secG; preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      NX779_03880 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      NX779_00690 secA; preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      NX779_03175 ftsY; signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      NX779_02135 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C    05111 Biofilm formation - Vibrio cholerae
C    02025 Biofilm formation - Pseudomonas aeruginosa
C    02026 Biofilm formation - Escherichia coli
B
B  09142 Cell motility
C    02030 Bacterial chemotaxis
C    02040 Flagellar assembly
D      NX779_01810 sigma-70 family RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor
C    04814 Motor proteins
C    04820 Cytoskeleton in muscle cells
D      NX779_02795 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C    04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B  09151 Immune system
C    04640 Hematopoietic cell lineage
C    04610 Complement and coagulation cascades
C    04611 Platelet activation
C    04613 Neutrophil extracellular trap formation
C    04620 Toll-like receptor signaling pathway
C    04624 Toll and Imd signaling pathway
C    04621 NOD-like receptor signaling pathway
C    04622 RIG-I-like receptor signaling pathway
C    04623 Cytosolic DNA-sensing pathway
C    04625 C-type lectin receptor signaling pathway
C    04650 Natural killer cell mediated cytotoxicity
C    04612 Antigen processing and presentation
C    04660 T cell receptor signaling pathway
C    04658 Th1 and Th2 cell differentiation
C    04659 Th17 cell differentiation
C    04657 IL-17 signaling pathway
C    04662 B cell receptor signaling pathway
C    04664 Fc epsilon RI signaling pathway
C    04666 Fc gamma R-mediated phagocytosis
C    04670 Leukocyte transendothelial migration
C    04672 Intestinal immune network for IgA production
C    04062 Chemokine signaling pathway
B
B  09152 Endocrine system
C    04911 Insulin secretion
C    04910 Insulin signaling pathway
C    04922 Glucagon signaling pathway
C    04923 Regulation of lipolysis in adipocytes
C    04920 Adipocytokine signaling pathway
C    03320 PPAR signaling pathway
C    04929 GnRH secretion
C    04912 GnRH signaling pathway
C    04913 Ovarian steroidogenesis
C    04915 Estrogen signaling pathway
C    04914 Progesterone-mediated oocyte maturation
C    04917 Prolactin signaling pathway
C    04921 Oxytocin signaling pathway
C    04926 Relaxin signaling pathway
C    04935 Growth hormone synthesis, secretion and action
C    04918 Thyroid hormone synthesis
C    04919 Thyroid hormone signaling pathway
C    04928 Parathyroid hormone synthesis, secretion and action
C    04916 Melanogenesis
C    04924 Renin secretion
C    04614 Renin-angiotensin system
C    04925 Aldosterone synthesis and secretion
C    04927 Cortisol synthesis and secretion
B
B  09153 Circulatory system
C    04260 Cardiac muscle contraction
C    04261 Adrenergic signaling in cardiomyocytes
C    04270 Vascular smooth muscle contraction
B
B  09154 Digestive system
C    04970 Salivary secretion
C    04971 Gastric acid secretion
C    04972 Pancreatic secretion
C    04976 Bile secretion
C    04973 Carbohydrate digestion and absorption
C    04974 Protein digestion and absorption
C    04975 Fat digestion and absorption
C    04979 Cholesterol metabolism
C    04977 Vitamin digestion and absorption
C    04980 Cobalamin transport and metabolism
C    04978 Mineral absorption
B
B  09155 Excretory system
C    04962 Vasopressin-regulated water reabsorption
C    04960 Aldosterone-regulated sodium reabsorption
C    04961 Endocrine and other factor-regulated calcium reabsorption
C    04964 Proximal tubule bicarbonate reclamation
C    04966 Collecting duct acid secretion
B
B  09156 Nervous system
C    04724 Glutamatergic synapse
C    04727 GABAergic synapse
C    04725 Cholinergic synapse
C    04728 Dopaminergic synapse
C    04726 Serotonergic synapse
C    04720 Long-term potentiation
C    04730 Long-term depression
C    04723 Retrograde endocannabinoid signaling
C    04721 Synaptic vesicle cycle
C    04722 Neurotrophin signaling pathway
B
B  09157 Sensory system
C    04744 Phototransduction
C    04745 Phototransduction - fly
C    04740 Olfactory transduction
C    04742 Taste transduction
C    04750 Inflammatory mediator regulation of TRP channels
B
B  09158 Development and regeneration
C    04320 Dorso-ventral axis formation
C    04360 Axon guidance
C    04361 Axon regeneration
C    04380 Osteoclast differentiation
B
B  09149 Aging
C    04211 Longevity regulating pathway
C    04212 Longevity regulating pathway - worm
C    04213 Longevity regulating pathway - multiple species
B
B  09159 Environmental adaptation
C    04710 Circadian rhythm
C    04713 Circadian entrainment
C    04711 Circadian rhythm - fly
C    04712 Circadian rhythm - plant
C    04714 Thermogenesis
C    04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B  09161 Cancer: overview
C    05200 Pathways in cancer
C    05202 Transcriptional misregulation in cancer
C    05206 MicroRNAs in cancer
C    05205 Proteoglycans in cancer
C    05204 Chemical carcinogenesis - DNA adducts
C    05207 Chemical carcinogenesis - receptor activation
C    05208 Chemical carcinogenesis - reactive oxygen species
C    05203 Viral carcinogenesis
C    05230 Central carbon metabolism in cancer
C    05231 Choline metabolism in cancer
C    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B  09162 Cancer: specific types
C    05210 Colorectal cancer
C    05212 Pancreatic cancer
C    05225 Hepatocellular carcinoma
C    05226 Gastric cancer
C    05214 Glioma
C    05216 Thyroid cancer
C    05221 Acute myeloid leukemia
C    05220 Chronic myeloid leukemia
C    05217 Basal cell carcinoma
C    05218 Melanoma
C    05211 Renal cell carcinoma
C    05219 Bladder cancer
C    05215 Prostate cancer
C    05213 Endometrial cancer
C    05224 Breast cancer
C    05222 Small cell lung cancer
C    05223 Non-small cell lung cancer
B
B  09172 Infectious disease: viral
C    05166 Human T-cell leukemia virus 1 infection
C    05170 Human immunodeficiency virus 1 infection
C    05161 Hepatitis B
C    05160 Hepatitis C
C    05171 Coronavirus disease - COVID-19
C    05164 Influenza A
C    05162 Measles
C    05168 Herpes simplex virus 1 infection
C    05163 Human cytomegalovirus infection
C    05167 Kaposi sarcoma-associated herpesvirus infection
C    05169 Epstein-Barr virus infection
C    05165 Human papillomavirus infection
B
B  09171 Infectious disease: bacterial
C    05110 Vibrio cholerae infection
C    05120 Epithelial cell signaling in Helicobacter pylori infection
C    05130 Pathogenic Escherichia coli infection
C    05132 Salmonella infection
C    05131 Shigellosis
C    05135 Yersinia infection
C    05133 Pertussis
C    05134 Legionellosis
C    05150 Staphylococcus aureus infection
C    05152 Tuberculosis
C    05100 Bacterial invasion of epithelial cells
B
B  09174 Infectious disease: parasitic
C    05146 Amoebiasis
C    05144 Malaria
C    05145 Toxoplasmosis
C    05140 Leishmaniasis
C    05142 Chagas disease
C    05143 African trypanosomiasis
B
B  09163 Immune disease
C    05310 Asthma
C    05322 Systemic lupus erythematosus
C    05323 Rheumatoid arthritis
C    05320 Autoimmune thyroid disease
C    05321 Inflammatory bowel disease
C    05330 Allograft rejection
C    05332 Graft-versus-host disease
C    05340 Primary immunodeficiency
B
B  09164 Neurodegenerative disease
C    05010 Alzheimer disease
C    05012 Parkinson disease
C    05014 Amyotrophic lateral sclerosis
C    05016 Huntington disease
C    05017 Spinocerebellar ataxia
C    05020 Prion disease
C    05022 Pathways of neurodegeneration - multiple diseases
B
B  09165 Substance dependence
C    05030 Cocaine addiction
C    05031 Amphetamine addiction
C    05032 Morphine addiction
C    05033 Nicotine addiction
C    05034 Alcoholism
B
B  09166 Cardiovascular disease
C    05417 Lipid and atherosclerosis
C    05418 Fluid shear stress and atherosclerosis
C    05410 Hypertrophic cardiomyopathy
C    05412 Arrhythmogenic right ventricular cardiomyopathy
C    05414 Dilated cardiomyopathy
C    05415 Diabetic cardiomyopathy
C    05416 Viral myocarditis
B
B  09167 Endocrine and metabolic disease
C    04930 Type II diabetes mellitus
C    04940 Type I diabetes mellitus
C    04950 Maturity onset diabetes of the young
C    04936 Alcoholic liver disease
C    04932 Non-alcoholic fatty liver disease
C    04931 Insulin resistance
C    04933 AGE-RAGE signaling pathway in diabetic complications
C    04934 Cushing syndrome
B
B  09175 Drug resistance: antimicrobial
C    01501 beta-Lactam resistance
D      NX779_00285 ABC transporter permease	K15581 oppB; oligopeptide transport system permease protein
D      NX779_00280 ABC transporter permease	K15582 oppC; oligopeptide transport system permease protein
D      NX779_00275 ATP-binding cassette domain-containing protein	K15583 oppD; oligopeptide transport system ATP-binding protein
D      NX779_00270 ATP-binding cassette domain-containing protein	K10823 oppF; oligopeptide transport system ATP-binding protein
C    01502 Vancomycin resistance
C    01503 Cationic antimicrobial peptide (CAMP) resistance
B
B  09176 Drug resistance: antineoplastic
C    01521 EGFR tyrosine kinase inhibitor resistance
C    01524 Platinum drug resistance
C    01523 Antifolate resistance
C    01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B  09181 Protein families: metabolism
C    01000 Enzymes [BR:mcot01000]
C    01001 Protein kinases [BR:mcot01001]
D      NX779_02905 serine/threonine protein kinase	K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C    01009 Protein phosphatases and associated proteins [BR:mcot01009]
D      NX779_01010 pfkA; 6-phosphofructokinase	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D      NX779_02900 serine/threonine-protein phosphatase	K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C    01002 Peptidases and inhibitors [BR:mcot01002]
D      NX779_03325 signal peptidase II	K03101 lspA; signal peptidase II [EC:3.4.23.36]
D      NX779_01765 DJ-1/PfpI family protein	K03152 thiJ; protein deglycase [EC:3.5.1.124]
D      NX779_00815 CPBP family intramembrane metalloprotease	K07052 K07052; CAAX protease family protein
D      NX779_00310 pepF; oligoendopeptidase F	K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D      NX779_03505 M13 family peptidase	K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D      NX779_00475 M17 family metallopeptidase	K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D      NX779_01245 M20 family metallopeptidase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      NX779_03865 map; type I methionyl aminopeptidase	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      NX779_01100 Xaa-Pro peptidase family protein	K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D      NX779_04415 ftsH; ATP-dependent zinc metalloprotease FtsH	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      NX779_01740 lon; endopeptidase La	K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
C    01003 Glycosyltransferases
C    01005 Lipopolysaccharide biosynthesis proteins
C    01011 Peptidoglycan biosynthesis and degradation proteins
C    01004 Lipid biosynthesis proteins [BR:mcot01004]
D      NX779_02940 plsX; phosphate acyltransferase PlsX	K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D      NX779_01365 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY	K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D      NX779_03355 1-acyl-sn-glycerol-3-phosphate acyltransferase	K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C    01008 Polyketide biosynthesis proteins
C    01006 Prenyltransferases
C    01007 Amino acid related enzymes [BR:mcot01007]
D      NX779_04300 gltX; glutamate--tRNA ligase	K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D      NX779_03595 tyrS; tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      NX779_02525 trpS; tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      NX779_00515 cysS; cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      NX779_01300 argS; arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      NX779_00355 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      NX779_03320 ileS; isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      NX779_02060 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      NX779_03685 leuS; leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      NX779_00325 lysS; lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      NX779_02400 aspS; aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      NX779_00775 asnS; asparagine--tRNA ligase	K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D      NX779_02405 hisS; histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      NX779_01795 glycine--tRNA ligase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      NX779_00220 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      NX779_02850 proS; proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      NX779_02755 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      NX779_00295 alaS; alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      NX779_01190 pheS; phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      NX779_01195 pheT; phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      NX779_04010 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C    00199 Cytochrome P450
C    00194 Photosynthesis proteins [BR:mcot00194]
D      NX779_00665 F0F1 ATP synthase subunit epsilon	K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D      NX779_00660 atpD; F0F1 ATP synthase subunit beta	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      NX779_03515 F0F1 ATP synthase subunit beta	K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D      NX779_00655 atpG; ATP synthase F1 subunit gamma	K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D      NX779_03520 ATP F0F1 synthase subunit alpha	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      NX779_00650 atpA; F0F1 ATP synthase subunit alpha	K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D      NX779_00645 F0F1 ATP synthase subunit delta	K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D      NX779_00640 atpF; F0F1 ATP synthase subunit B	K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D      NX779_00635 atpE; ATP synthase F0 subunit C	K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D      NX779_00630 F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B  09182 Protein families: genetic information processing
C    03000 Transcription factors [BR:mcot03000]
D      NX779_02835 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_03385 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_01670 hrcA; heat-inducible transcriptional repressor HrcA	K03705 hrcA; heat-inducible transcriptional repressor
C    03021 Transcription machinery [BR:mcot03021]
D      NX779_03840 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      NX779_00580 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      NX779_00585 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      NX779_04290 rpoE; DNA-directed RNA polymerase subunit delta	K03048 rpoE; DNA-directed RNA polymerase subunit delta
D      NX779_01810 sigma-70 family RNA polymerase sigma factor	K03086 rpoD; RNA polymerase primary sigma factor
D      NX779_01125 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      NX779_01400 nusB; transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB
D      NX779_00535 nusG; transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG
D      NX779_02465 greA; transcription elongation factor GreA	K03624 greA; transcription elongation factor GreA
C    03019 Messenger RNA biogenesis [BR:mcot03019]
D      NX779_02935 rnc; ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      NX779_02495 ribonuclease J	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      NX779_02890 ribonuclease J	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      NX779_02130 rny; ribonuclease Y	K18682 rny; ribonucrease Y [EC:3.1.-.-]
D      NX779_02720 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
D      NX779_03215 HD domain-containing protein	K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D      NX779_01825 DEAD/DEAH box helicase	K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D      NX779_02795 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NX779_01010 pfkA; 6-phosphofructokinase	K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D      NX779_01680 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
C    03041 Spliceosome
C    03011 Ribosome [BR:mcot03011]
D      NX779_01250 rpsB; 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      NX779_03945 rpsC; 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      NX779_03585 rpsD; 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      NX779_00480 rpsF; 30S ribosomal protein S6	K02990 RP-S6; small subunit ribosomal protein S6
D      NX779_00450 rpsG; 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      NX779_03905 rpsH; 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      NX779_03785 rpsI; 30S ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      NX779_03980 rpsJ; 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      NX779_03845 rpsK; 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      NX779_00445 rpsL; 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      NX779_03850 rpsM; 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      NX779_03910 type Z 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      NX779_02330 rpsO; 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      NX779_02145 rpsP; 30S ribosomal protein S16	K02959 RP-S16; small subunit ribosomal protein S16
D      NX779_03930 rpsQ; 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      NX779_00490 rpsR; 30S ribosomal protein S18	K02963 RP-S18; small subunit ribosomal protein S18
D      NX779_03955 rpsS; 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      NX779_01440 rpsT; 30S ribosomal protein S20	K02968 RP-S20; small subunit ribosomal protein S20
D      NX779_01305 rpsU; 30S ribosomal protein S21	K02970 RP-S21; small subunit ribosomal protein S21
D      NX779_00545 rplA; 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      NX779_03960 rplB; 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      NX779_03975 rplC; 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      NX779_03970 rplD; 50S ribosomal protein L4	K02926 RP-L4; large subunit ribosomal protein L4
D      NX779_03915 rplE; 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      NX779_03900 rplF; 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      NX779_00495 rplI; 50S ribosomal protein L9	K02939 RP-L9; large subunit ribosomal protein L9
D      NX779_00565 rplJ; 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      NX779_00540 rplK; 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      NX779_00570 rplL; 50S ribosomal protein L7/L12	K02935 RP-L7; large subunit ribosomal protein L7/L12
D      NX779_03790 rplM; 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      NX779_03925 rplN; 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      NX779_03885 rplO; 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      NX779_03940 rplP; 50S ribosomal protein L16	K02878 RP-L16; large subunit ribosomal protein L16
D      NX779_03835 rplQ; 50S ribosomal protein L17	K02879 RP-L17; large subunit ribosomal protein L17
D      NX779_03895 rplR; 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      NX779_02160 rplS; 50S ribosomal protein L19	K02884 RP-L19; large subunit ribosomal protein L19
D      NX779_02540 rplT; 50S ribosomal protein L20	K02887 RP-L20; large subunit ribosomal protein L20
D      NX779_03295 rplU; 50S ribosomal protein L21	K02888 RP-L21; large subunit ribosomal protein L21
D      NX779_03950 rplV; 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      NX779_03965 rplW; 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      NX779_03920 rplX; 50S ribosomal protein L24	K02895 RP-L24; large subunit ribosomal protein L24
D      NX779_03305 rpmA; 50S ribosomal protein L27	K02899 RP-L27; large subunit ribosomal protein L27
D      NX779_03140 rpmB; 50S ribosomal protein L28	K02902 RP-L28; large subunit ribosomal protein L28
D      NX779_03935 rpmC; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      NX779_01205 rpmF; 50S ribosomal protein L32	K02911 RP-L32; large subunit ribosomal protein L32
D      NX779_00525 rpmG; 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      NX779_01095 rpmG; 50S ribosomal protein L33	K02913 RP-L33; large subunit ribosomal protein L33
D      NX779_04495 rpmH; 50S ribosomal protein L34	K02914 RP-L34; large subunit ribosomal protein L34
D      NX779_02545 rpmI; 50S ribosomal protein L35	K02916 RP-L35; large subunit ribosomal protein L35
D      NX779_03855 rpmJ; 50S ribosomal protein L36	K02919 RP-L36; large subunit ribosomal protein L36
C    03009 Ribosome biogenesis [BR:mcot03009]
D      NX779_02935 rnc; ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      NX779_01780 era; GTPase Era	K03595 era; GTPase
D      NX779_01915 obgE; GTPase ObgE	K03979 obgE; GTPase [EC:3.6.5.-]
D      NX779_01125 nusA; transcription termination factor NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      NX779_01400 nusB; transcription antitermination factor NusB	K03625 nusB; transcription antitermination protein NusB
D      NX779_00535 nusG; transcription termination/antitermination protein NusG	K02601 nusG; transcription termination/antitermination protein NusG
D      NX779_00030 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D      NX779_03390 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D      NX779_03400 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D      NX779_00415 16S rRNA (uracil(1498)-N(3))-methyltransferase	K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D      NX779_04350 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      NX779_01210 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D      NX779_03285 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase	K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D      NX779_00520 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D      NX779_02140 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D      NX779_01565 rRNA pseudouridine synthase	K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D      NX779_00820 RluA family pseudouridine synthase	K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D      NX779_03330 RluA family pseudouridine synthase	K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D      NX779_02150 16S rRNA processing protein RimM	K02860 rimM; 16S rRNA processing protein RimM
D      NX779_02800 ruvX; Holliday junction resolvase RuvX	K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D      NX779_01825 DEAD/DEAH box helicase	K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D      NX779_02910 rsgA; ribosome small subunit-dependent GTPase A	K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D      NX779_02225 der; ribosome biogenesis GTPase Der	K03977 engA; GTPase
D      NX779_02165 ylqF; ribosome biogenesis GTPase YlqF	K14540 rbgA; ribosome biogenesis GTPase A
D      NX779_01330 yqeH; ribosome biogenesis GTPase YqeH	K06948 yqeH; 30S ribosome assembly GTPase
D      NX779_04235 Sua5/YciO/YrdC/YwlC family protein	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      NX779_01850 RelA/SpoT family protein	K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D      NX779_01460 rbfA; 30S ribosome-binding factor RbfA	K02834 rbfA; ribosome-binding factor A
D      NX779_01120 rimP; ribosome maturation factor RimP	K09748 rimP; ribosome maturation factor RimP
D      NX779_01775 ybeY; rRNA maturation RNase YbeY	K07042 ybeY; probable rRNA maturation factor
D      NX779_04340 ychF; redox-regulated ATPase YchF	K06942 ychF; ribosome-binding ATPase
C    03016 Transfer RNA biogenesis [BR:mcot03016]
D      NX779_02850 proS; proline--tRNA ligase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      NX779_03320 ileS; isoleucine--tRNA ligase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      NX779_03685 leuS; leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      NX779_00355 metG; methionine--tRNA ligase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      NX779_01300 argS; arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      NX779_00325 lysS; lysine--tRNA ligase	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      NX779_02400 aspS; aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      NX779_00295 alaS; alanine--tRNA ligase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      NX779_00775 asnS; asparagine--tRNA ligase	K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D      NX779_01795 glycine--tRNA ligase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      NX779_02755 thrS; threonine--tRNA ligase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      NX779_00220 serS; serine--tRNA ligase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      NX779_00515 cysS; cysteine--tRNA ligase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      NX779_02060 valine--tRNA ligase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      NX779_02405 hisS; histidine--tRNA ligase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      NX779_01190 pheS; phenylalanine--tRNA ligase subunit alpha	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      NX779_01195 pheT; phenylalanine--tRNA ligase subunit beta	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      NX779_03595 tyrS; tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      NX779_02525 trpS; tryptophan--tRNA ligase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      NX779_03240 HIT family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      NX779_00725 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB	K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D      NX779_03810 tRNA pseudouridine synthase A	K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D      NX779_01465 truB; tRNA pseudouridine(55) synthase TruB	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D      NX779_04235 Sua5/YciO/YrdC/YwlC family protein	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      NX779_00140 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D      NX779_04380 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D      NX779_04490 rnpA; ribonuclease P protein component	K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D      NX779_04300 gltX; glutamate--tRNA ligase	K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D      NX779_04455 nucleoside deaminase	K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D      NX779_00330 dusB; tRNA dihydrouridine synthase DusB	K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D      NX779_02530 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D      NX779_01880 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D      NX779_03200 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D      NX779_02155 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD	K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D      NX779_01645 tRNA (cytidine(34)-2'-O)-methyltransferase	K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D      NX779_01155 RNA methyltransferase	K03437 spoU; RNA methyltransferase, TrmH family
D      NX779_01700 mnmA; tRNA 2-thiouridine(34) synthase MnmA	K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D      NX779_03435 thiI; tRNA 4-thiouridine(8) synthase ThiI	K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D      NX779_04420 tilS; tRNA lysidine(34) synthetase TilS	K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D      NX779_02825 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D      NX779_00760 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D      NX779_02820 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D      NX779_02720 rnr; ribonuclease R	K12573 rnr; ribonuclease R [EC:3.1.13.1]
C    03012 Translation factors [BR:mcot03012]
D      NX779_01140 infB; translation initiation factor IF-2	K02519 infB; translation initiation factor IF-2
D      NX779_02550 infC; translation initiation factor IF-3	K02520 infC; translation initiation factor IF-3
D      NX779_01255 tsf; translation elongation factor Ts	K02357 tsf; elongation factor Ts
D      NX779_00460 tuf; elongation factor Tu	K02358 tuf; elongation factor Tu
D      NX779_00455 fusA; elongation factor G	K02355 fusA; elongation factor G
D      NX779_04250 prfA; peptide chain release factor 1	K02835 prfA; peptide chain release factor 1
D      NX779_01295 frr; ribosome recycling factor	K02838 frr; ribosome recycling factor
D      NX779_04245 prmC; peptide chain release factor N(5)-glutamine methyltransferase	K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D      NX779_00375 pth; aminoacyl-tRNA hydrolase	K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D      NX779_03860 infA; translation initiation factor IF-1	K02518 infA; translation initiation factor IF-1
D      NX779_01725 efp; elongation factor P	K02356 efp; elongation factor P
C    03110 Chaperones and folding catalysts [BR:mcot03110]
D      NX779_01665 AAA family ATPase	K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D      NX779_01680 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      NX779_01685 dnaJ; molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      NX779_04405 Hsp33 family molecular chaperone HslO	K04083 hslO; molecular chaperone Hsp33
D      NX779_01675 nucleotide exchange factor GrpE	K03687 GRPE; molecular chaperone GrpE
D      NX779_04415 ftsH; ATP-dependent zinc metalloprotease FtsH	K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D      NX779_00630 F0F1 ATP synthase subunit A	K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D      NX779_04035 thioredoxin family protein	K03671 TXN; thioredoxin
C    04131 Membrane trafficking [BR:mcot04131]
D      NX779_00985 gap; type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      NX779_01005 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
C    04121 Ubiquitin system
C    03051 Proteasome
C    03032 DNA replication proteins [BR:mcot03032]
D      NX779_02835 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_03385 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_02215 HU family DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      NX779_00005 dnaA; chromosomal replication initiator protein DnaA	K02313 dnaA; chromosomal replication initiator protein
D      NX779_00500 dnaB; replicative DNA helicase	K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D      NX779_01805 toprim domain-containing protein	K02316 dnaG; DNA primase [EC:2.7.7.101]
D      NX779_03415 DnaD domain protein	K03346 dnaB; replication initiation and membrane attachment protein
D      NX779_03410 ATP-binding protein	K11144 dnaI; primosomal protein DnaI
D      NX779_00485 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_03055 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_03430 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NX779_01110 PolC-type DNA polymerase III	K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D      NX779_00010 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NX779_01435 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NX779_04435 DNA polymerase III subunit delta	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      NX779_04450 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NX779_02170 ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      NX779_03425 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NX779_00830 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      NX779_00045 gyrA; DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      NX779_00040 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      NX779_02080 DNA topoisomerase 4 subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      NX779_02075 parE; DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      NX779_04310 DNA topoisomerase	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C    03036 Chromosome and associated proteins [BR:mcot03036]
D      NX779_02835 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_03385 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_02935 rnc; ribonuclease III	K03685 rnc; ribonuclease III [EC:3.1.26.3]
D      NX779_02215 HU family DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      NX779_00005 dnaA; chromosomal replication initiator protein DnaA	K02313 dnaA; chromosomal replication initiator protein
D      NX779_02930 chromosome segregation protein SMC	K03529 smc; chromosome segregation protein
D      NX779_01575 segregation/condensation protein A	K05896 scpA; segregation and condensation protein A
D      NX779_01570 scpB; SMC-Scp complex subunit ScpB	K06024 scpB; segregation and condensation protein B
D      NX779_01220 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      NX779_01225 cell division protein SepF	K09772 sepF; cell division inhibitor SepF
D      NX779_02980 ParA family protein	K03496 parA; chromosome partitioning protein
D      NX779_02080 DNA topoisomerase 4 subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      NX779_02075 parE; DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D      NX779_04380 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D      NX779_04350 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D      NX779_02530 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D      NX779_01880 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D      NX779_03200 trmFO; methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D      NX779_02335 Fic family protein	K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D      NX779_04110 Fic family protein	K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D      NX779_02345 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC	K03978 engB; GTP-binding protein
D      NX779_02670 whiA; DNA-binding protein WhiA	K09762 whiA; cell division protein WhiA
C    03400 DNA repair and recombination proteins [BR:mcot03400]
D      NX779_03210 uracil-DNA glycosylase	K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D      NX779_03420 mutM; DNA-formamidopyrimidine glycosylase	K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D      NX779_01390 deoxyribonuclease IV	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D      NX779_00830 ligA; NAD-dependent DNA ligase LigA	K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D      NX779_03425 polA; DNA polymerase I	K02335 polA; DNA polymerase I [EC:2.7.7.7]
D      NX779_00710 uvrA; excinuclease ABC subunit UvrA	K03701 uvrA; excinuclease ABC subunit A
D      NX779_00705 uvrB; excinuclease ABC subunit UvrB	K03702 uvrB; excinuclease ABC subunit B
D      NX779_02480 uvrC; excinuclease ABC subunit UvrC	K03703 uvrC; excinuclease ABC subunit C
D      NX779_00795 UvrD-helicase domain-containing protein	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      NX779_00580 DNA-directed RNA polymerase subunit beta	K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D      NX779_00585 rpoC; DNA-directed RNA polymerase subunit beta'	K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D      NX779_03840 DNA-directed RNA polymerase subunit alpha	K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D      NX779_04290 rpoE; DNA-directed RNA polymerase subunit delta	K03048 rpoE; DNA-directed RNA polymerase subunit delta
D      NX779_01405 xseA; exodeoxyribonuclease VII large subunit	K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D      NX779_01410 xseB; exodeoxyribonuclease VII small subunit	K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D      NX779_03430 DNA polymerase III subunit alpha	K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D      NX779_01110 PolC-type DNA polymerase III	K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D      NX779_00010 DNA polymerase III subunit beta	K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D      NX779_01435 holA; DNA polymerase III subunit delta	K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D      NX779_04435 DNA polymerase III subunit delta	K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D      NX779_04450 dnaX; DNA polymerase III subunit gamma/tau	K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D      NX779_00485 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_03055 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_02315 AAA family ATPase	K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D      NX779_02180 recA; recombinase RecA	K03553 recA; recombination protein RecA
D      NX779_01310 helix-hairpin-helix domain-containing protein	K03550 ruvA; holliday junction DNA helicase RuvA
D      NX779_01315 ruvB; Holliday junction branch migration DNA helicase RuvB	K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D      NX779_01785 recO; DNA repair protein RecO	K03584 recO; DNA repair protein RecO (recombination protein O)
D      NX779_04445 recR; recombination mediator RecR	K06187 recR; recombination protein RecR
D      NX779_02205 Holliday junction resolvase RecU	K03700 recU; recombination protein U
D      NX779_00045 gyrA; DNA gyrase subunit A	K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D      NX779_00040 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B	K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D      NX779_04310 DNA topoisomerase	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D      NX779_02215 HU family DNA-binding protein	K03530 hupB; DNA-binding protein HU-beta
D      NX779_00745 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      NX779_00735 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta	K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D      NX779_01690 bifunctional oligoribonuclease/PAP phosphatase NrnA	K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D      NX779_04260 bifunctional oligoribonuclease/PAP phosphatase NrnA	K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C    03029 Mitochondrial biogenesis [BR:mcot03029]
D      NX779_01140 infB; translation initiation factor IF-2	K02519 infB; translation initiation factor IF-2
D      NX779_02550 infC; translation initiation factor IF-3	K02520 infC; translation initiation factor IF-3
D      NX779_01255 tsf; translation elongation factor Ts	K02357 tsf; elongation factor Ts
D      NX779_00460 tuf; elongation factor Tu	K02358 tuf; elongation factor Tu
D      NX779_00455 fusA; elongation factor G	K02355 fusA; elongation factor G
D      NX779_01780 era; GTPase Era	K03595 era; GTPase
D      NX779_03595 tyrS; tyrosine--tRNA ligase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      NX779_03685 leuS; leucine--tRNA ligase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      NX779_02400 aspS; aspartate--tRNA ligase	K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D      NX779_01795 glycine--tRNA ligase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      NX779_01300 argS; arginine--tRNA ligase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      NX779_00840 aspartyl/glutamyl-tRNA amidotransferase subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      NX779_00845 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      NX779_00835 aspartyl/glutamyl-tRNA amidotransferase subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      NX779_00485 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_03055 single-stranded DNA-binding protein	K03111 ssb; single-strand DNA-binding protein
D      NX779_01680 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      NX779_01675 nucleotide exchange factor GrpE	K03687 GRPE; molecular chaperone GrpE
D      NX779_01685 dnaJ; molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      NX779_04485 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B  09183 Protein families: signaling and cellular processes
C    02000 Transporters [BR:mcot02000]
D      NX779_01870 ABC transporter ATP-binding protein/permease	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      NX779_01875 ABC transporter B family permease/ATP-binding protein	K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D      NX779_03990 extracellular solute-binding protein	K11070 potC; spermidine/putrescine transport system permease protein
D      NX779_03995 ABC transporter permease	K11071 potB; spermidine/putrescine transport system permease protein
D      NX779_04000 ABC transporter ATP-binding protein	K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D      NX779_02685 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      NX779_03700 ABC transporter ATP-binding protein	K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D      NX779_00905 ABC transporter permease	K23535 nupB; general nucleoside transport system permease protein
D      NX779_00910 ABC transporter permease	K23536 nupC; general nucleoside transport system permease protein
D      NX779_00900 ABC transporter ATP-binding protein	K23537 nupA; general nucleoside transport system ATP-binding protein
D      NX779_02690 sugar ABC transporter permease	K02025 ABC.MS.P; multiple sugar transport system permease protein
D      NX779_02695 ABC transporter permease subunit	K02026 ABC.MS.P1; multiple sugar transport system permease protein
D      NX779_03155 ptsS; phosphate ABC transporter substrate-binding protein	K02040 pstS; phosphate transport system substrate-binding protein
D      NX779_03160 pstA; phosphate ABC transporter permease PstA	K02037 pstC; phosphate transport system permease protein
D      NX779_03165 pstB; phosphate ABC transporter ATP-binding protein PstB	K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D      NX779_02250 ABC transporter substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      NX779_04475 PhnD/SsuA/transferrin family substrate-binding protein	K02044 phnD; phosphonate transport system substrate-binding protein
D      NX779_02240 ABC transporter permease subunit	K02042 phnE; phosphonate transport system permease protein
D      NX779_04465 ABC transporter permease subunit	K02042 phnE; phosphonate transport system permease protein
D      NX779_04470 phnC; phosphonate ABC transporter ATP-binding protein	K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D      NX779_00285 ABC transporter permease	K15581 oppB; oligopeptide transport system permease protein
D      NX779_00280 ABC transporter permease	K15582 oppC; oligopeptide transport system permease protein
D      NX779_00275 ATP-binding cassette domain-containing protein	K15583 oppD; oligopeptide transport system ATP-binding protein
D      NX779_00270 ATP-binding cassette domain-containing protein	K10823 oppF; oligopeptide transport system ATP-binding protein
D      NX779_03815 energy-coupling factor transporter transmembrane protein EcfT	K16785 ecfT; energy-coupling factor transport system permease protein
D      NX779_03825 energy-coupling factor transporter ATPase	K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D      NX779_03820 energy-coupling factor transporter ATPase	K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D      NX779_03670 hypothetical protein	K25147 berB; beta-exotoxin I transport system permease protein
D      NX779_03665 ABC transporter ATP-binding protein	K25148 berA; beta-exotoxin I transport system ATP-binding protein
D      NX779_00170 ABC transporter permease	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      NX779_00165 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      NX779_03800 FtsX-like permease family protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      NX779_04410 ABC transporter ATP-binding protein	K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D      NX779_02560 ptsP; phosphoenolpyruvate--protein phosphotransferase	K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D      NX779_00810 HPr family phosphocarrier protein	K02784 ptsH; phosphocarrier protein HPr
D      NX779_02555 PTS glucose transporter subunit IIA	K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D      NX779_04130 PTS transporter subunit EIIC	K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D      NX779_00090 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_00095 PTS transporter subunit EIIC	K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D      NX779_01265 PTS transporter subunit EIIC	K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D      NX779_03370 aquaporin family protein	K02440 glpF; glycerol uptake facilitator
D      NX779_00720 mgtE; magnesium transporter	K06213 mgtE; magnesium transporter
D      NX779_00860 TrkH family potassium uptake protein	K03498 trkH; trk/ktr system potassium uptake protein
D      NX779_00855 NAD-binding protein	K03499 trkA; trk/ktr system potassium uptake protein
D      NX779_00225 chromate transporter	K07240 chrA; chromate transporter
D      NX779_00230 chromate transporter	K07240 chrA; chromate transporter
C    02044 Secretion system [BR:mcot02044]
D      NX779_03340 dCMP deaminase family protein	K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D      NX779_03065 type IV secretory system conjugative DNA transfer family protein	K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D      NX779_00690 secA; preprotein translocase subunit SecA	K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D      NX779_02715 secG; preprotein translocase subunit SecG	K03075 secG; preprotein translocase subunit SecG
D      NX779_03880 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      NX779_02135 ffh; signal recognition particle protein	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      NX779_03175 ftsY; signal recognition particle-docking protein FtsY	K03110 ftsY; fused signal recognition particle receptor
D      NX779_04485 yidC; membrane protein insertase YidC	K03217 yidC; YidC/Oxa1 family membrane protein insertase
C    02042 Bacterial toxins
C    02022 Two-component system
C    02035 Bacterial motility proteins
C    03037 Cilium and associated proteins
C    04812 Cytoskeleton proteins [BR:mcot04812]
D      NX779_01220 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      NX779_02980 ParA family protein	K03496 parA; chromosome partitioning protein
C    04147 Exosome [BR:mcot04147]
D      NX779_02795 eno; phosphopyruvate hydratase	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      NX779_00985 gap; type I glyceraldehyde-3-phosphate dehydrogenase	K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D      NX779_00990 phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      NX779_01005 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      NX779_01680 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      NX779_03270 glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      NX779_00460 tuf; elongation factor Tu	K02358 tuf; elongation factor Tu
D      NX779_03240 HIT family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      NX779_00380 L-lactate dehydrogenase	K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D      NX779_03870 adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      NX779_01845 adenine phosphoribosyltransferase	K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D      NX779_03365 glpK; glycerol kinase GlpK	K00864 glpK; glycerol kinase [EC:2.7.1.30]
D      NX779_02095 dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_02590 lpdA; dihydrolipoyl dehydrogenase	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      NX779_00965 tpiA; triose-phosphate isomerase	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C    02048 Prokaryotic defense system [BR:mcot02048]
D      NX779_01035 type I restriction-modification system subunit M	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D      NX779_02420 site-specific DNA-methyltransferase	K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D      NX779_02835 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_03385 DNA cytosine methyltransferase	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      NX779_02425 site-specific DNA-methyltransferase	K24451 zim; modification methylase
D      NX779_04105 type II toxin-antitoxin system RelB/DinJ family antitoxin	K07473 dinJ; DNA-damage-inducible protein J
D      NX779_01220 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      NX779_02080 DNA topoisomerase 4 subunit A	K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D      NX779_02075 parE; DNA topoisomerase IV subunit B	K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C    04030 G protein-coupled receptors
C    04050 Cytokine receptors
C    04054 Pattern recognition receptors
C    03310 Nuclear receptors
C    04040 Ion channels
C    04031 GTP-binding proteins
C    04052 Cytokines and neuropeptides
C    04515 Cell adhesion molecules
C    04090 CD molecules
C    01504 Antimicrobial resistance genes
C    00535 Proteoglycans
C    00536 Glycosaminoglycan binding proteins
C    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C    04091 Lectins
C    04990 Domain-containing proteins not elsewhere classified
B
B  09185 Viral protein families
C    03200 Viral proteins
C    03210 Viral fusion proteins
B
B  09184 RNA family
C    03100 Non-coding RNAs [BR:mcot03100]
D      NX779_00930 tRNA-Ala	K14218 tRNA-Ala; tRNA Ala
D      NX779_00920 tRNA-Arg	K14219 tRNA-Arg; tRNA Arg
D      NX779_00955 tRNA-Asp	K14221 tRNA-Asp; tRNA Asp
D      NX779_01075 tRNA-Gln	K14223 tRNA-Gln; tRNA Gln
D      NX779_00950 tRNA-Met	K14230 tRNA-Met; tRNA Met
D      NX779_00960 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      NX779_00925 tRNA-Pro	K14232 tRNA-Pro; tRNA Pro
#
A09190 Not Included in Pathway or Brite
B
B  09191 Unclassified: metabolism
C    99980 Enzymes with EC numbers
D      NX779_00120 FMN-dependent NADH-azoreductase	K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D      NX779_00245 msrB; peptide-methionine (R)-S-oxide reductase MsrB	K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D      NX779_00340 peroxiredoxin	K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D      NX779_02655 prolipoprotein diacylglyceryl transferase	K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D      NX779_02665 prolipoprotein diacylglyceryl transferase	K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D      NX779_02945 DAK2 domain-containing protein	K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D      NX779_02650 hprK; HPr(Ser) kinase/phosphatase	K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D      NX779_00175 TatD family hydrolase	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      NX779_00115 TatD family hydrolase	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      NX779_00025 rnmV; ribonuclease M5	K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D      NX779_00390 alpha-xylosidase	K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D      NX779_03405 def; peptide deformylase	K01462 PDF; peptide deformylase [EC:3.5.1.88]
D      NX779_04015 RidA family protein	K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D      NX779_02340 cation-translocating P-type ATPase	K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D      NX779_04370 HAD-IC family P-type ATPase	K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D      NX779_02815 mgtA; magnesium-translocating P-type ATPase	K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C    99981 Carbohydrate metabolism
C    99982 Energy metabolism
D      NX779_03260 iron-sulfur cluster assembly scaffold protein	K04488 iscU; nitrogen fixation protein NifU and related proteins
C    99983 Lipid metabolism
C    99984 Nucleotide metabolism
D      NX779_00740 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	K03647 nrdI; protein involved in ribonucleotide reduction
C    99985 Amino acid metabolism
C    99986 Glycan metabolism
C    99987 Cofactor metabolism
C    99988 Secondary metabolism
C    99999 Others
B
B  09192 Unclassified: genetic information processing
C    99973 Transcription
D      NX779_04030 cold shock domain-containing protein	K03704 cspA; cold shock protein
C    99974 Translation
C    99975 Protein processing
D      NX779_01735 tig; trigger factor	K03545 tig; trigger factor
D      NX779_02725 smpB; SsrA-binding protein SmpB	K03664 smpB; SsrA-binding protein
C    99976 Replication and repair
D      NX779_02855 ribonuclease H family protein	K06993 K06993; ribonuclease H-related protein
D      NX779_01865 DNA-processing protein DprA	K04096 smf; DNA processing protein
D      NX779_01745 replication-associated recombination protein A	K07478 ycaJ; putative ATPase
C    99979 Viral proteins
C    99998 Others
B
B  09193 Unclassified: signaling and cellular processes
C    99977 Transport
C    99978 Cell growth
C    99993 Cell motility
C    99995 Signaling proteins
D      NX779_01000 typA; translational GTPase TypA	K06207 typA; GTP-binding protein
C    99992 Structural proteins
C    99994 Others
D      NX779_03170 phoU; phosphate signaling complex protein PhoU	K02039 phoU; phosphate transport system protein
D      NX779_03195 copper homeostasis protein CutC	K06201 cutC; copper homeostasis protein
B
B  09194 Poorly characterized
C    99996 General function prediction only
D      NX779_03605 hypothetical protein	K06878 K06878; tRNA-binding protein
D      NX779_01660 LemA family protein	K03744 lemA; LemA protein
C    99997 Function unknown
D      NX779_04295 HD domain-containing protein	K06885 K06885; uncharacterized protein
D      NX779_00190 alpha/beta hydrolase	K06889 K06889; uncharacterized protein
D      NX779_00730 lysophospholipase	K06889 K06889; uncharacterized protein
D      NX779_00765 prolyl oligopeptidase family serine peptidase	K06889 K06889; uncharacterized protein
D      NX779_03315 alpha/beta hydrolase	K06889 K06889; uncharacterized protein
D      NX779_02470 dicarboxylate/amino acid:cation symporter	K06956 K06956; uncharacterized protein
D      NX779_00305 DUF4143 domain-containing protein	K07133 K07133; uncharacterized protein
D      NX779_00680 ATP-binding protein	K07133 K07133; uncharacterized protein
D      NX779_03275 ATP-binding protein	K07133 K07133; uncharacterized protein
D      NX779_03180 DNA-binding protein	K09787 K09787; uncharacterized protein
D      NX779_01345 YneF family protein	K09976 K09976; uncharacterized protein
D      NX779_03300 ribosomal-processing cysteine protease Prp	K07584 ysxB; uncharacterized protein
D      NX779_01130 YlxR family protein	K07742 ylxR; uncharacterized protein
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#<hr>
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#Last updated: June 24, 2024