+D GENES KO
#
KEGG Orthology (KO) - Candidatus Megaira endosymbiont of Mesostigma viride
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:menm00010]
D LF888_04045 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LF888_00915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LF888_01760 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LF888_01155 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D LF888_01160 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D LF888_01165 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00020 Citrate cycle (TCA cycle) [PATH:menm00020]
D LF888_04480 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LF888_01565 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LF888_01520 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LF888_06315 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LF888_06320 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_03425 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LF888_03420 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LF888_00600 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LF888_01465 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LF888_01470 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LF888_01180 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LF888_04305 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LF888_01155 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D LF888_01160 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D LF888_01165 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:menm00030]
D LF888_04045 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LF888_01910 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LF888_01360 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LF888_05045 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LF888_06035 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LF888_05195 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
C 00040 Pentose and glucuronate interconversions [PATH:menm00040]
D LF888_03690 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LF888_01910 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:menm00051]
D LF888_03385 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LF888_05185 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LF888_00915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LF888_06035 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism
D LF888_05090 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
C 00053 Ascorbate and aldarate metabolism
D LF888_03690 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:menm00500]
D LF888_00630 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LF888_04045 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:menm00520]
D LF888_04435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LF888_04445 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D LF888_04440 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LF888_05460 NTP transferase domain-containing protein K11528 glmU; UDP-N-acetylglucosamine pyrophosphorylase [EC:2.7.7.23]
D LF888_04520 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D LF888_04515 NTP transferase domain-containing protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D LF888_01275 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LF888_01395 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LF888_04670 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D LF888_06155 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D LF888_03690 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LF888_05090 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LF888_04045 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LF888_05185 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LF888_03385 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00620 Pyruvate metabolism [PATH:menm00620]
D LF888_01155 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D LF888_01160 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D LF888_01165 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02865 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LF888_04305 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LF888_01180 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LF888_01760 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:menm00630]
D LF888_04305 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LF888_04480 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D LF888_01565 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LF888_01415 3-oxoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LF888_01770 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D LF888_01775 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LF888_02420 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04275 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04775 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_02460 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:menm00640]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LF888_01770 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D LF888_01775 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LF888_03420 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LF888_03425 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:menm00650]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LF888_01035 abhydrolase domain-containing 18 K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LF888_05135 phaC; class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D LF888_02020 phaZ; polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D LF888_01415 3-oxoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D LF888_00600 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LF888_01465 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LF888_01470 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LF888_00655 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D LF888_00650 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D LF888_01650 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
C 00660 C5-Branched dibasic acid metabolism
D LF888_03420 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LF888_03425 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:menm00562]
D LF888_05845 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D LF888_00915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:menm00190]
D LF888_05495 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D LF888_05500 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D LF888_05505 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D LF888_05510 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D LF888_05515 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D LF888_05525 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D LF888_06225 nuoG; NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D LF888_06230 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D LF888_06235 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D LF888_06240 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D LF888_06245 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D LF888_06250 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D LF888_06255 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D LF888_06260 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D LF888_00600 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LF888_01465 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LF888_01470 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LF888_01545 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LF888_01540 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LF888_01535 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LF888_02915 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LF888_03610 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D LF888_02910 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D LF888_02900 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D LF888_03615 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LF888_02250 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LF888_04390 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LF888_04395 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LF888_01010 cytochrome c family protein K08738 CYC; cytochrome c
D LF888_01955 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LF888_01945 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LF888_01950 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LF888_01960 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LF888_01940 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LF888_04605 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LF888_04590 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LF888_04595 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LF888_04600 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LF888_01490 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D LF888_00325 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:menm00710]
D LF888_01360 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D LF888_06035 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D LF888_00915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D LF888_01910 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D LF888_05045 fructose-6-phosphate aldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D LF888_01760 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LF888_02865 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D LF888_04305 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:menm00720]
D LF888_01760 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D LF888_04305 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D LF888_01180 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D LF888_00600 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D LF888_01465 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D LF888_01470 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D LF888_03425 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D LF888_03420 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LF888_01520 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LF888_01565 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D LF888_01200 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
C 00680 Methane metabolism [PATH:menm00680]
D LF888_02460 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LF888_04305 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00910 Nitrogen metabolism [PATH:menm00910]
D LF888_02280 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LF888_02420 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04275 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04775 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
C 00920 Sulfur metabolism
D LF888_01205 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:menm00061]
D LF888_00890 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D LF888_05395 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LF888_04215 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LF888_00895 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LF888_00885 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LF888_03975 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LF888_02830 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:menm00071]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LF888_02970 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism
D LF888_01410 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:menm00564]
D LF888_04085 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D LF888_01410 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D LF888_00990 phospholipase D family protein K17717 pld; phospholipase D [EC:3.1.4.4]
D LF888_06545 phospholipase D family protein K17717 pld; phospholipase D [EC:3.1.4.4]
D LF888_02970 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D LF888_01710 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D LF888_01330 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LF888_01335 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D LF888_00660 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D LF888_03145 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism
D LF888_00990 phospholipase D family protein K17717 pld; phospholipase D [EC:3.1.4.4]
D LF888_06545 phospholipase D family protein K17717 pld; phospholipase D [EC:3.1.4.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:menm01040]
D LF888_03230 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:menm00230]
D LF888_05195 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D LF888_02960 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D LF888_04770 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LF888_05020 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LF888_05610 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D LF888_05935 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D LF888_03865 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LF888_03860 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LF888_00015 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D LF888_04990 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D LF888_06200 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LF888_05835 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D LF888_03475 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:menm00240]
D LF888_06220 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D LF888_05020 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LF888_01820 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D LF888_00015 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D LF888_02995 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D LF888_03865 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LF888_03860 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D LF888_02145 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D LF888_03035 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LF888_01385 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D LF888_04785 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:menm00250]
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LF888_01225 hypothetical protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LF888_02280 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LF888_04755 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LF888_02420 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04275 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04775 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C 00260 Glycine, serine and threonine metabolism [PATH:menm00260]
D LF888_01870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LF888_02425 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LF888_00255 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D LF888_00260 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D LF888_02460 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LF888_01840 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_01330 phosphatidylcholine/phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D LF888_00935 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:menm00270]
D LF888_04040 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D LF888_04770 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D LF888_01870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LF888_02425 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LF888_01730 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LF888_04305 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00280 Valine, leucine and isoleucine degradation [PATH:menm00280]
D LF888_01730 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LF888_01770 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01965 PCCA; propionyl-CoA carboxylase alpha subunit [EC:6.4.1.3]
D LF888_01775 acyl-CoA carboxylase subunit beta K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D LF888_00655 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D LF888_00650 3-oxoacid CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:menm00290]
D LF888_00935 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D LF888_01730 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:menm00300]
D LF888_01870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LF888_02425 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LF888_01735 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LF888_04455 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D LF888_04425 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D LF888_04420 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LF888_04095 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D LF888_00450 PLP-dependent aminotransferase family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D LF888_05655 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LF888_05650 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:menm00310]
D LF888_06320 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:menm00220]
D LF888_01225 hypothetical protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LF888_02420 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04275 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04775 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_02280 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LF888_05980 hypothetical protein K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
C 00330 Arginine and proline metabolism [PATH:menm00330]
D LF888_04040 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D LF888_04755 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism [PATH:menm00350]
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LF888_00455 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
C 00360 Phenylalanine metabolism [PATH:menm00360]
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LF888_00455 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
C 00380 Tryptophan metabolism [PATH:menm00380]
D LF888_06320 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:menm00400]
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism
D LF888_02280 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D LF888_00715 MBL fold metallo-hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:menm00450]
D LF888_01195 NAD(P)/FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LF888_00620 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D LF888_04975 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:menm00460]
D LF888_00630 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D LF888_02460 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:menm00470]
D LF888_01060 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LF888_01400 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LF888_02690 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LF888_04095 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
C 00480 Glutathione metabolism [PATH:menm00480]
D LF888_04630 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LF888_02920 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LF888_01520 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D LF888_04040 fused MFS/spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:menm00540]
D LF888_03970 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LF888_05455 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LF888_03980 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LF888_03965 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LF888_03205 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LF888_05325 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LF888_01695 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D LF888_00905 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LF888_04350 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LF888_05320 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LF888_05330 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:menm00541]
D LF888_05090 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D LF888_03690 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D LF888_03385 mannose-1-phosphate guanylyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D LF888_05185 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D LF888_04440 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D LF888_04670 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D LF888_06155 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:menm00550]
D LF888_01275 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LF888_01395 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LF888_01390 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LF888_02690 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LF888_05655 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LF888_01400 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LF888_05650 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LF888_01715 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LF888_05645 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LF888_02635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LF888_03955 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LF888_04995 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LF888_05660 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LF888_02695 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LF888_04070 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LF888_01985 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:menm00730]
D LF888_03830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_03835 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_03475 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism
D LF888_04555 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:menm00760]
D LF888_03620 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D LF888_04890 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LF888_04895 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D LF888_04900 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
C 00770 Pantothenate and CoA biosynthesis [PATH:menm00770]
D LF888_01065 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D LF888_04820 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D LF888_06360 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D LF888_00300 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D LF888_01730 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:menm00780]
D LF888_00895 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LF888_00885 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LF888_03975 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LF888_02830 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LF888_06265 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:menm00785]
D LF888_02305 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D LF888_01615 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_01155 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D LF888_01160 pyruvate dehydrogenase complex E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D LF888_01165 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D LF888_06315 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D LF888_06320 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
C 00790 Folate biosynthesis [PATH:menm00790]
D LF888_03790 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D LF888_03260 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D LF888_03255 folP; dihydropteroate synthase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15]
D LF888_03250 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LF888_02715 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D LF888_01935 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LF888_05640 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LF888_05630 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LF888_04335 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:menm00670]
D LF888_03250 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D LF888_01200 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D LF888_02460 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D LF888_04235 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LF888_01385 thyX; FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D LF888_03390 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:menm00860]
D LF888_01840 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D LF888_01185 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_00590 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_04175 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LF888_01995 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D LF888_04830 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D LF888_04915 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D LF888_04840 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D LF888_04835 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D LF888_02915 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LF888_02250 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:menm00130]
D LF888_04565 UbiA family prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LF888_05925 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D LF888_04555 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LF888_01875 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D LF888_01005 FAD-dependent monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D LF888_03660 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D LF888_06280 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D LF888_00455 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:menm00900]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LF888_04555 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D LF888_03065 idi; isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D LF888_01270 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LF888_01715 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:menm00907]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D LF888_01360 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:menm00946]
D LF888_00630 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:menm00261]
D LF888_00335 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
D LF888_01870 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D LF888_02425 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D LF888_01735 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D LF888_04455 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
D LF888_05845 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D LF888_05395 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LF888_00885 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LF888_02830 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:menm00998]
D LF888_00890 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D LF888_00350 sbnA; 2,3-diaminopropionate biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
C 00999 Biosynthesis of various plant secondary metabolites
D LF888_00630 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
D LF888_00350 sbnA; 2,3-diaminopropionate biosynthesis protein SbnA K21949 sbnA; N-(2-amino-2-carboxyethyl)-L-glutamate synthase [EC:2.5.1.140]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:menm00362]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LF888_02660 dioxygenase
C 00627 Aminobenzoate degradation
D LF888_04555 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:menm00930]
D LF888_04620 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:menm03020]
D LF888_00770 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LF888_00775 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LF888_03460 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:menm03010]
D LF888_01815 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LF888_03550 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LF888_00155 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LF888_03495 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LF888_05870 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LF888_00725 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LF888_03510 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LF888_05485 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LF888_03585 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LF888_03465 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LF888_00720 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LF888_03470 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LF888_03515 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LF888_03995 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LF888_00835 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LF888_03535 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LF888_05865 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LF888_03560 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LF888_03450 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LF888_05780 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LF888_00755 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LF888_03565 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LF888_03580 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LF888_03575 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LF888_03520 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LF888_03505 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LF888_00765 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LF888_05860 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LF888_00760 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LF888_00750 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LF888_05490 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LF888_03530 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LF888_03485 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LF888_03545 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LF888_03455 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LF888_03500 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LF888_02740 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LF888_03925 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LF888_05125 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LF888_03555 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LF888_03570 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LF888_03525 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LF888_00860 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D LF888_05120 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LF888_03190 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LF888_03540 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LF888_03490 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LF888_03185 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LF888_04210 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LF888_00830 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LF888_05355 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LF888_03930 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LF888_01340 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LF888_03165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LF888_05730 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:menm00970]
D LF888_02405 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LF888_04585 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LF888_05450 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LF888_00525 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LF888_03285 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LF888_03370 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LF888_06305 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LF888_05685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LF888_03595 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LF888_03235 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LF888_02320 tRNA-His K14226 tRNA-His; tRNA His
D LF888_03085 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LF888_04415 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LF888_02815 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LF888_04355 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LF888_04290 tRNA-Met K14230 tRNA-Met; tRNA Met
D LF888_05480 tRNA-Met K14230 tRNA-Met; tRNA Met
D LF888_01460 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LF888_02730 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LF888_04270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LF888_00035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LF888_06365 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LF888_00120 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LF888_00840 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LF888_00735 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LF888_03600 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LF888_01825 tRNA-Val K14237 tRNA-Val; tRNA Val
D LF888_04120 tRNA-Val K14237 tRNA-Val; tRNA Val
D LF888_01185 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_00590 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_04195 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LF888_04190 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LF888_04200 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LF888_03900 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LF888_00980 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LF888_03115 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LF888_03110 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LF888_02710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LF888_03405 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LF888_05015 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LF888_04975 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LF888_04235 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D LF888_04560 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LF888_04055 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LF888_05765 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LF888_06290 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D LF888_04985 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LF888_03785 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LF888_05280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LF888_05545 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LF888_05540 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LF888_02115 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LF888_04375 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:menm03060]
D LF888_03480 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LF888_00740 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LF888_00910 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LF888_05895 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LF888_05855 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LF888_05885 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LF888_05970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LF888_04720 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LF888_03000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LF888_01230 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LF888_00680 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LF888_05690 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D LF888_03400 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D LF888_02600 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LF888_03175 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:menm04122]
D LF888_03830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_03835 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_05995 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:menm03018]
D LF888_03880 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D LF888_05145 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LF888_03990 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LF888_04310 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LF888_03630 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D LF888_00110 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LF888_00790 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LF888_01215 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:menm03030]
D LF888_04815 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LF888_00875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LF888_05960 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LF888_00595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LF888_02515 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LF888_00805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LF888_01590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LF888_00625 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LF888_05310 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LF888_02890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LF888_02560 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LF888_02070 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LF888_03275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:menm03410]
D LF888_01280 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LF888_03655 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LF888_04475 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LF888_03650 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LF888_03675 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LF888_01790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LF888_03275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:menm03420]
D LF888_01605 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LF888_02895 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D LF888_02620 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D LF888_02975 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D LF888_02085 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LF888_03275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:menm03430]
D LF888_01755 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LF888_02300 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D LF888_02085 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LF888_03720 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LF888_04165 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LF888_01790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LF888_02890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LF888_00875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LF888_01590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LF888_05960 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LF888_02515 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LF888_00595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LF888_04815 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LF888_00805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LF888_03275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:menm03440]
D LF888_01790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LF888_02890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LF888_01610 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D LF888_01675 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LF888_05950 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D LF888_00880 recA; recombinase RecA K03553 recA; recombination protein RecA
D LF888_01970 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LF888_01975 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LF888_02055 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LF888_00785 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LF888_00875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LF888_01590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LF888_05960 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LF888_02515 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LF888_00595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LF888_04815 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LF888_00805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LF888_03380 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:menm02010]
D LF888_04865 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D LF888_04860 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D LF888_04855 ABC transporter permease subunit K11071 potB; spermidine/putrescine transport system permease protein
D LF888_04850 potA; polyamine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D LF888_00075 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D LF888_02550 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LF888_01055 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LF888_01050 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LF888_01220 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D LF888_04135 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D LF888_04140 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D LF888_03810 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D LF888_06130 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein
D LF888_06140 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D LF888_06135 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D LF888_03780 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D LF888_03775 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LF888_04765 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D LF888_01555 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D LF888_01560 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D LF888_05920 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D LF888_05905 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D LF888_01680 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LF888_05880 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LF888_03040 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D LF888_03045 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D LF888_02415 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:menm03070]
D LF888_01635 TolC family protein K12340 tolC; outer membrane protein
D LF888_05895 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LF888_05855 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LF888_00740 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LF888_00910 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LF888_03480 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LF888_05885 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LF888_05970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LF888_04720 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LF888_00680 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LF888_03000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LF888_01230 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LF888_05690 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D LF888_03400 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D LF888_01095 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3
D LF888_03135 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9
D LF888_05815 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9
D LF888_01105 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D LF888_01110 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D LF888_01115 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D LF888_01120 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D LF888_03130 hypothetical protein K03203 virB8; type IV secretion system protein VirB8
D LF888_05810 virB8 family protein K03203 virB8; type IV secretion system protein VirB8
D LF888_05820 hypothetical protein K03195 virB10; type IV secretion system protein VirB10
D LF888_01100 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D LF888_02940 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D LF888_05825 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D LF888_05830 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:menm02020]
D LF888_05875 winged helix-turn-helix domain-containing protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D LF888_01720 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D LF888_01725 response regulator transcription factor K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D LF888_05235 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D LF888_01435 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D LF888_01865 HAD-IC family P-type ATPase K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D LF888_01860 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D LF888_02250 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LF888_01595 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LF888_04025 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LF888_04010 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LF888_04015 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D LF888_02420 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04275 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04775 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_06345 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D LF888_06350 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LF888_04080 HAMP domain-containing histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D LF888_00815 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D LF888_00810 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
D LF888_01175 hypothetical protein K13588 chpT; histidine phosphotransferase ChpT
D LF888_01545 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D LF888_01540 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LF888_01535 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D LF888_01010 cytochrome c family protein K08738 CYC; cytochrome c
D LF888_04390 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D LF888_04395 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D LF888_01635 TolC family protein K12340 tolC; outer membrane protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D LF888_01545 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:menm02024]
D LF888_05970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LF888_00740 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LF888_00910 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LF888_03480 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LF888_05885 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LF888_04720 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LF888_00680 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LF888_03000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LF888_01230 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D LF888_05315 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:menm01501]
D LF888_04075 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LF888_01635 TolC family protein K12340 tolC; outer membrane protein
D LF888_03955 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LF888_04995 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LF888_05660 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LF888_05130 blaOXA; class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:menm01502]
D LF888_01400 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LF888_01060 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LF888_05650 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D LF888_05645 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LF888_02635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:menm01503]
D LF888_05235 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D LF888_01635 TolC family protein K12340 tolC; outer membrane protein
D LF888_03970 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:menm01000]
C 01001 Protein kinases [BR:menm01001]
D LF888_01720 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D LF888_06345 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D LF888_04080 HAMP domain-containing histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:menm01009]
D LF888_01020 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:menm01002]
D LF888_03175 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D LF888_05800 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LF888_04170 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K07010 K07010; putative glutamine amidotransferase
D LF888_04435 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D LF888_00640 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D LF888_04630 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D LF888_04420 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D LF888_04955 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D LF888_03270 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D LF888_02340 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D LF888_05205 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D LF888_00615 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LF888_05235 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D LF888_03090 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D LF888_02695 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LF888_04070 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LF888_01985 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LF888_04530 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D LF888_00940 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D LF888_03340 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LF888_02600 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D LF888_03875 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D LF888_01745 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D LF888_02210 HK97 family phage prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D LF888_02440 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D LF888_05240 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D LF888_05245 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:menm01003]
D LF888_03955 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:menm01005]
D LF888_03970 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D LF888_03205 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D LF888_05455 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D LF888_03980 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D LF888_03625 phosphatase PAP2 family protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-]
D LF888_03965 lpxI; UDP-2,3-diacylglucosamine diphosphatase LpxI K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D LF888_05325 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D LF888_05330 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D LF888_05320 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D LF888_00905 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D LF888_04350 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D LF888_01695 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:menm01011]
D LF888_01275 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D LF888_01395 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D LF888_01390 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D LF888_02690 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D LF888_05655 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D LF888_01400 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D LF888_01060 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D LF888_05645 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D LF888_02635 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D LF888_00820 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LF888_03955 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D LF888_04995 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D LF888_05660 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LF888_02695 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LF888_04070 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D LF888_01985 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D LF888_05390 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D LF888_03015 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:menm01004]
D LF888_05395 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D LF888_04215 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D LF888_00895 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D LF888_00885 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D LF888_03975 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D LF888_02830 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D LF888_03230 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D LF888_01410 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:menm01008]
D LF888_00335 MbtH family NRPS accessory protein K05375 mbtH; MbtH protein
C 01006 Prenyltransferases [BR:menm01006]
D LF888_01270 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D LF888_01715 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D LF888_04360 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LF888_04565 UbiA family prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D LF888_02915 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:menm01007]
D LF888_06290 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D LF888_01185 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_00590 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_02115 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LF888_04375 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LF888_05015 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LF888_04985 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LF888_04975 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LF888_05765 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LF888_04560 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LF888_04055 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LF888_00980 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LF888_05280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LF888_03115 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LF888_03110 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LF888_03405 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LF888_03785 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LF888_02710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LF888_03900 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LF888_05545 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LF888_05540 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LF888_00090 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D LF888_01840 hemA; 5-aminolevulinate synthase K00643 E2.3.1.37; 5-aminolevulinate synthase [EC:2.3.1.37]
D LF888_01730 aminotransferase class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:menm00194]
D LF888_01940 atpC; ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D LF888_01945 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D LF888_01950 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D LF888_01955 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D LF888_01960 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D LF888_04590 ATP F0F1 synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LF888_04595 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D LF888_04600 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D LF888_04605 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LF888_04610 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:menm03000]
D LF888_05535 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LF888_03825 Rrf2 family transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D LF888_06265 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D LF888_04755 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D LF888_00695 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D LF888_05040 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LF888_06935 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LF888_05600 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D LF888_01785 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D LF888_03355 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D LF888_02470 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D LF888_00950 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:menm03021]
D LF888_03460 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LF888_00770 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LF888_00775 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LF888_05315 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D LF888_05295 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D LF888_03755 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D LF888_06210 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D LF888_00745 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LF888_03355 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D LF888_05300 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D LF888_04310 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:menm03019]
D LF888_05145 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LF888_02595 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LF888_03630 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D LF888_03990 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D LF888_04310 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D LF888_00110 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LF888_00790 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LF888_01215 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D LF888_03880 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
C 03041 Spliceosome
C 03011 Ribosome [BR:menm03011]
D LF888_01815 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D LF888_03550 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D LF888_00155 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D LF888_03495 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D LF888_05870 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D LF888_00725 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D LF888_03510 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D LF888_05485 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D LF888_03585 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D LF888_03465 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D LF888_00720 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D LF888_03470 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D LF888_03515 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D LF888_03995 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D LF888_00835 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D LF888_03535 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D LF888_05865 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D LF888_03560 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D LF888_03450 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D LF888_05780 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D LF888_00755 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D LF888_03565 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D LF888_03580 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D LF888_03575 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D LF888_03520 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D LF888_03505 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D LF888_05860 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D LF888_00760 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D LF888_00750 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D LF888_00765 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D LF888_05490 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D LF888_03530 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D LF888_03485 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D LF888_03545 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D LF888_03455 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D LF888_03500 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D LF888_02740 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D LF888_03925 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D LF888_05125 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D LF888_03555 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D LF888_03570 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D LF888_03525 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D LF888_05120 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D LF888_03190 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D LF888_03540 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D LF888_03490 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D LF888_03185 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D LF888_04210 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D LF888_00830 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D LF888_05355 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D LF888_03930 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D LF888_01340 ykgO; type B 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D LF888_00860 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D LF888_03165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LF888_05730 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:menm03009]
D LF888_02595 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LF888_02590 era; GTPase Era K03595 era; GTPase
D LF888_04380 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D LF888_03355 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D LF888_03755 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D LF888_06210 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D LF888_00745 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D LF888_03850 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D LF888_04285 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D LF888_02075 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D LF888_05030 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LF888_00955 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D LF888_03945 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D LF888_03605 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D LF888_06205 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D LF888_06005 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D LF888_01575 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D LF888_04060 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D LF888_02255 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D LF888_04470 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D LF888_04645 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D LF888_02850 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D LF888_02790 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D LF888_05145 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D LF888_03195 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D LF888_02170 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D LF888_03105 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LF888_06200 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D LF888_03745 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D LF888_03760 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D LF888_05160 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D LF888_01905 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D LF888_03315 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:menm03016]
D LF888_01185 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_00590 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_03785 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D LF888_05765 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D LF888_04055 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LF888_04975 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D LF888_04985 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LF888_00980 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LF888_03900 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D LF888_02710 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D LF888_03405 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D LF888_05015 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D LF888_04560 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D LF888_05280 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D LF888_05545 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D LF888_05540 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D LF888_02115 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LF888_04375 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D LF888_02430 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LF888_05560 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D LF888_04000 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D LF888_03830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_03835 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_03105 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D LF888_04360 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D LF888_02285 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D LF888_05025 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LF888_01205 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D LF888_05350 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D LF888_02495 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D LF888_00985 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D LF888_01700 ribonuclease H-like domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D LF888_06290 lysine--tRNA ligase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D LF888_03115 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D LF888_03110 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D LF888_04155 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D LF888_06335 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D LF888_04800 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D LF888_04090 mtaB; tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D LF888_06270 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D LF888_02735 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D LF888_05995 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D LF888_03845 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein
D LF888_01295 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D LF888_04295 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D LF888_05630 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D LF888_01935 6-carboxytetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D LF888_05640 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D LF888_04335 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D LF888_01255 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D LF888_05805 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D LF888_00610 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D LF888_05180 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D LF888_01015 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D LF888_05335 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D LF888_03990 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:menm03012]
D LF888_03750 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LF888_02705 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LF888_03325 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D LF888_05555 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D LF888_03590 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LF888_00730 fusA; elongation factor G K02355 fusA; elongation factor G
D LF888_01320 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D LF888_06215 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D LF888_05570 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D LF888_00855 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D LF888_05270 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D LF888_05850 efp; elongation factor P K02356 efp; elongation factor P
D LF888_02675 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:menm03110]
D LF888_04540 AAA family ATPase K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D LF888_05375 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D LF888_04525 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D LF888_02445 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D LF888_01020 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D LF888_00110 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LF888_04320 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D LF888_00790 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LF888_00105 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LF888_04325 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D LF888_02490 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D LF888_02090 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D LF888_00795 co-chaperone GroES K04078 groES; chaperonin GroES
D LF888_05235 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D LF888_00615 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D LF888_04605 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D LF888_03000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LF888_05575 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D LF888_00070 trxA; thioredoxin K03671 TXN; thioredoxin
D LF888_02625 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D LF888_04535 glutaredoxin K03676 grxC; glutaredoxin 3
D LF888_01285 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
C 04131 Membrane trafficking [BR:menm04131]
D LF888_05020 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D LF888_01020 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:menm03051]
D LF888_01020 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:menm03032]
D LF888_02560 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D LF888_01580 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_06830 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_06860 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_04220 HU family DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D LF888_01595 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LF888_00625 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D LF888_05310 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D LF888_02890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LF888_00875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LF888_01590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LF888_00805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LF888_02515 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LF888_00595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LF888_04815 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LF888_05960 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LF888_02070 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D LF888_03275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LF888_04250 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LF888_05345 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LF888_00925 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LF888_03870 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LF888_00150 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:menm03036]
D LF888_02595 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D LF888_01580 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_06830 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_06860 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_04220 HU family DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D LF888_01595 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D LF888_05635 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D LF888_04265 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LF888_05660 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D LF888_05605 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D LF888_00960 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D LF888_01405 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D LF888_02630 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LF888_03640 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LF888_02150 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D LF888_05910 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LF888_05915 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D LF888_05005 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D LF888_01075 ParA family protein K03496 parA; chromosome partitioning protein
D LF888_05035 ParA family protein K03496 parA; chromosome partitioning protein
D LF888_06720 ParA family protein K03496 parA; chromosome partitioning protein
D LF888_06790 ParA family protein K03496 parA; chromosome partitioning protein
D LF888_05040 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LF888_06935 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LF888_00925 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LF888_03870 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LF888_05025 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D LF888_05030 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D LF888_03350 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D LF888_06045 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D LF888_06800 site-specific integrase K04763 xerD; integrase/recombinase XerD
D LF888_05250 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LF888_05975 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:menm03400]
D LF888_04240 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LF888_06405 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D LF888_01280 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D LF888_03035 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D LF888_05535 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D LF888_06400 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D LF888_04475 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D LF888_03655 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D LF888_03650 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LF888_03675 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D LF888_01790 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D LF888_03275 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D LF888_02895 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D LF888_02620 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D LF888_02975 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D LF888_02085 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D LF888_00770 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D LF888_00775 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D LF888_03460 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D LF888_01605 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D LF888_01755 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D LF888_02300 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D LF888_03720 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D LF888_04165 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D LF888_00875 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D LF888_01590 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D LF888_00805 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D LF888_02515 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D LF888_00595 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D LF888_04815 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D LF888_05960 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D LF888_02890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LF888_00880 recA; recombinase RecA K03553 recA; recombination protein RecA
D LF888_01970 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D LF888_01975 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D LF888_02055 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D LF888_03380 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D LF888_04280 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D LF888_01610 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D LF888_00785 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D LF888_01675 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D LF888_05950 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D LF888_05700 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D LF888_05785 UvrD-helicase domain-containing protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D LF888_01085 PD-(D/E)XK nuclease family protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D LF888_04250 gyrA; DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D LF888_05345 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D LF888_00150 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D LF888_01580 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_06830 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_06860 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D LF888_04220 HU family DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D LF888_03340 umuD; translesion error-prone DNA polymerase V autoproteolytic subunit K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D LF888_03865 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D LF888_03860 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:menm03029]
D LF888_01540 cytochrome b/b6 K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D LF888_03750 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D LF888_02705 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D LF888_05555 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D LF888_03590 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LF888_00730 fusA; elongation factor G K02355 fusA; elongation factor G
D LF888_02590 era; GTPase Era K03595 era; GTPase
D LF888_02115 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D LF888_04055 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D LF888_00980 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D LF888_04985 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D LF888_04195 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D LF888_04190 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D LF888_04200 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D LF888_02890 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D LF888_06310 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D LF888_00110 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LF888_02490 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D LF888_00790 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LF888_00795 co-chaperone GroES K04078 groES; chaperonin GroES
D LF888_00105 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D LF888_03830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_03835 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_04325 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D LF888_01285 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D LF888_05250 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D LF888_02915 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D LF888_03615 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D LF888_02250 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D LF888_05970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LF888_03635 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D LF888_04180 SCO family protein K07152 SCO1; protein SCO1
D LF888_01020 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:menm02000]
D LF888_05880 ABC transporter ATP-binding protein/permease K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D LF888_03915 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LF888_04930 ATP-binding cassette domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LF888_06010 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LF888_00250 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LF888_00500 ABC transporter ATP-binding protein/permease K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D LF888_03040 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D LF888_03045 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D LF888_02415 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D LF888_01190 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D LF888_04865 extracellular solute-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D LF888_04860 potC; spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D LF888_04855 ABC transporter permease subunit K11071 potB; spermidine/putrescine transport system permease protein
D LF888_04850 potA; polyamine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D LF888_00535 ABC transporter permease subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D LF888_00530 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D LF888_02550 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D LF888_01055 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D LF888_01050 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D LF888_00075 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D LF888_04465 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LF888_04810 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D LF888_04635 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D LF888_04640 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D LF888_01220 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D LF888_04135 metal ABC transporter permease K09816 znuB; zinc transport system permease protein
D LF888_04140 metal ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D LF888_03810 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D LF888_06140 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D LF888_06130 hypothetical protein K10107 kpsE; capsular polysaccharide transport system permease protein
D LF888_06135 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D LF888_05920 LptF/LptG family permease K07091 lptF; lipopolysaccharide export system permease protein
D LF888_05905 LptF/LptG family permease K11720 lptG; lipopolysaccharide export system permease protein
D LF888_01680 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D LF888_03780 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D LF888_03775 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D LF888_04765 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D LF888_01555 heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D LF888_01560 ccmA; heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D LF888_04805 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D LF888_01290 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D LF888_01250 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LF888_04905 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LF888_06050 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D LF888_01855 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D LF888_04075 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D LF888_01495 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LF888_03320 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LF888_03410 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D LF888_03100 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D LF888_02920 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D LF888_04875 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel
D LF888_03335 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D LF888_02025 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D LF888_02030 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D LF888_00645 CrcB family protein K06199 crcB; fluoride exporter
D LF888_01380 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D LF888_04015 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D LF888_03855 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase
D LF888_01635 TolC family protein K12340 tolC; outer membrane protein
D LF888_06310 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D LF888_05695 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D LF888_01045 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA
D LF888_00675 translocation/assembly module TamB domain-containing protein K09800 tamB; translocation and assembly module TamB
D LF888_01685 LptA/OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D LF888_01690 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D LF888_03725 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D LF888_01900 hemolysin family protein K06189 corC; hemolysin (HlyC) family protein
D LF888_03920 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D LF888_04745 DMT family transporter K15270 sam; S-adenosylmethionine uptake transporter
D LF888_05165 cation:proton antiporter K03455 KEA1_2_3; K+:H+ antiporter
D LF888_02220 DUF4040 domain-containing protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D LF888_02225 Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D LF888_02230 Na+/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D LF888_02235 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D LF888_02240 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D LF888_02245 hypothetical protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D LF888_03095 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D LF888_02215 mnhG; monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D LF888_00820 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D LF888_02860 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D LF888_01525 AEC family transporter K24180 mleP; malate permease and related proteins
D LF888_02500 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D LF888_02955 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D LF888_00295 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter
D LF888_02630 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D LF888_05215 FTR1 family protein K07243 FTR; high-affinity iron transporter
D LF888_06895 SemiSWEET transporter K15383 K15383; MtN3 and saliva related transmembrane protein
D LF888_04510 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D LF888_02040 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D LF888_01780 thioredoxin family protein K08344 scsB; suppressor for copper-sensitivity B
D LF888_01325 HlyD family secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D LF888_02410 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D LF888_03050 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D LF888_05680 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D LF888_01375 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:menm02044]
D LF888_01635 TolC family protein K12340 tolC; outer membrane protein
D LF888_02415 type I secretion system permease/ATPase K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D LF888_02410 HlyD family type I secretion periplasmic adaptor subunit K12537 hasE; membrane fusion protein, type I secretion system
D LF888_03040 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D LF888_03045 ATP-binding cassette domain-containing protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D LF888_03050 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D LF888_05800 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LF888_01095 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3
D LF888_01100 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D LF888_02940 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D LF888_01105 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D LF888_01110 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D LF888_01115 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D LF888_01120 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D LF888_03130 hypothetical protein K03203 virB8; type IV secretion system protein VirB8
D LF888_05810 virB8 family protein K03203 virB8; type IV secretion system protein VirB8
D LF888_03135 virB9; P-type conjugative transfer protein VirB9 K03204 virB9; type IV secretion system protein VirB9
D LF888_05815 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9
D LF888_05820 hypothetical protein K03195 virB10; type IV secretion system protein VirB10
D LF888_05825 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D LF888_05830 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D LF888_06565 conjugal transfer protein TraG N-terminal domain-containing protein K12056 traG; conjugal transfer mating pair stabilization protein TraG
D LF888_06575 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D LF888_06580 traN; conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D LF888_06595 trbC; type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC
D LF888_06600 TraU family protein K12060 traU; conjugal transfer pilus assembly protein TraU
D LF888_06605 conjugal transfer protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW
D LF888_06620 TraC family protein K12063 traC; conjugal transfer ATP-binding protein TraC
D LF888_06630 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D LF888_06640 hypothetical protein K12067 traE; conjugal transfer pilus assembly protein TraE
D LF888_06570 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D LF888_03855 autotransporter domain-containing protein K12686 apeE; outer membrane lipase/esterase
D LF888_04015 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D LF888_04025 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LF888_04010 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LF888_04720 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D LF888_03000 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D LF888_05895 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D LF888_00740 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D LF888_05855 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D LF888_00910 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D LF888_03480 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D LF888_01230 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D LF888_00680 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D LF888_05885 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D LF888_05970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D LF888_05690 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D LF888_03400 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:menm02042]
D LF888_01380 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:menm02022]
D LF888_05875 winged helix-turn-helix domain-containing protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D LF888_01720 ATP-binding protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D LF888_01725 response regulator transcription factor K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D LF888_03010 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D LF888_06345 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D LF888_06350 sigma-54 dependent transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D LF888_04080 HAMP domain-containing histidine kinase K07716 pleC; two-component system, cell cycle sensor histidine kinase PleC [EC:2.7.13.3]
D LF888_00815 PleD family two-component system response regulator K02488 pleD; two-component system, cell cycle response regulator [EC:2.7.7.65]
D LF888_00810 response regulator K11443 divK; two-component system, cell cycle response regulator DivK
C 02035 Bacterial motility proteins [BR:menm02035]
D LF888_05800 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D LF888_04015 fimbria/pilus outer membrane usher protein K07347 fimD; outer membrane usher protein
D LF888_04025 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D LF888_04010 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:menm04812]
D LF888_05910 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LF888_03640 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LF888_04265 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D LF888_01075 ParA family protein K03496 parA; chromosome partitioning protein
D LF888_05035 ParA family protein K03496 parA; chromosome partitioning protein
D LF888_06720 ParA family protein K03496 parA; chromosome partitioning protein
D LF888_06790 ParA family protein K03496 parA; chromosome partitioning protein
D LF888_05040 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D LF888_06935 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:menm04147]
D LF888_01020 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D LF888_00140 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D LF888_00790 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D LF888_00110 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D LF888_04045 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D LF888_03590 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D LF888_02430 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D LF888_01030 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D LF888_03475 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D LF888_01225 hypothetical protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D LF888_02420 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04275 glutamine synthetase beta-grasp domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04775 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D LF888_04175 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D LF888_00455 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D LF888_01170 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_02520 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D LF888_00915 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:menm02048]
D LF888_02380 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D LF888_00555 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-]
D LF888_03640 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D LF888_05910 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D LF888_00925 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D LF888_03870 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D LF888_01185 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_00590 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D LF888_01600 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D LF888_03830 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D LF888_03835 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:menm01504]
D LF888_05190 acetyltransferase K00663 aacA; aminoglycoside 6'-N-acetyltransferase [EC:2.3.1.82]
D LF888_02100 aminoglycoside phosphotransferase family protein K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D LF888_02905 CatB-related O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D LF888_02950 CatB-related O-acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D LF888_01635 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:menm03100]
D LF888_02405 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LF888_04585 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D LF888_05450 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LF888_00525 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LF888_03285 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D LF888_03370 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D LF888_06305 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D LF888_05685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D LF888_03595 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LF888_03235 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D LF888_02320 tRNA-His K14226 tRNA-His; tRNA His
D LF888_03085 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D LF888_04415 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LF888_02815 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D LF888_04355 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D LF888_04290 tRNA-Met K14230 tRNA-Met; tRNA Met
D LF888_05480 tRNA-Met K14230 tRNA-Met; tRNA Met
D LF888_01460 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D LF888_02730 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D LF888_04270 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LF888_00035 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LF888_06365 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D LF888_00120 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LF888_00840 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D LF888_00735 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D LF888_03600 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D LF888_01825 tRNA-Val K14237 tRNA-Val; tRNA Val
D LF888_04120 tRNA-Val K14237 tRNA-Val; tRNA Val
D LF888_03165 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D LF888_05730 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D LF888_03245 CADD family putative folate metabolism protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D LF888_05385 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D LF888_00010 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D LF888_02825 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D LF888_01845 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D LF888_04825 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D LF888_06275 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D LF888_04980 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D LF888_00580 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D LF888_01365 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LF888_02605 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D LF888_04725 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LF888_04845 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D LF888_04920 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D LF888_04760 ferredoxin family protein K05524 fdxA; ferredoxin
D LF888_03840 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
D LF888_03665 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D LF888_05775 COQ9 family protein K18587 COQ9; ubiquinone biosynthesis protein COQ9
D LF888_01585 ubiquinone-binding protein K18588 COQ10; coenzyme Q-binding protein COQ10
C 99988 Secondary metabolism
C 99999 Others
D LF888_02450 dienelactone hydrolase family protein K06999 K06999; phospholipase/carboxylesterase
D LF888_03080 acetate--CoA ligase family protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D LF888_03770 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D LF888_04410 tig; trigger factor K03545 tig; trigger factor
D LF888_01740 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D LF888_02290 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D LF888_04950 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D LF888_00585 hypothetical protein K03630 radC; DNA repair protein RadC
D LF888_02840 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D LF888_04910 YraN family protein K07460 yraN; putative endonuclease
D LF888_00145 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D LF888_06115 transposase K07483 K07483; transposase
D LF888_06390 transposase K07483 K07483; transposase
D LF888_02330 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D LF888_06475 IS256 family transposase K07493 K07493; putative transposase
D LF888_06110 IS3 family transposase K07497 K07497; putative transposase
D LF888_06385 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D LF888_05955 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D LF888_06000 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D LF888_02050 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D LF888_01040 NTP/NDP exchange transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D LF888_02105 NTP/NDP exchange transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D LF888_02785 NTP/NDP exchange transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D LF888_00185 oligopeptide:H+ symporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D LF888_04125 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D LF888_05290 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D LF888_02585 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D LF888_05220 septation protein IspZ K06190 ispZ; intracellular septation protein
D LF888_05445 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
D LF888_00520 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
D LF888_03225 TfoX/Sxy family protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D LF888_03220 typA; translational GTPase TypA K06207 typA; GTP-binding protein
C 99992 Structural proteins
D LF888_00080 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D LF888_06065 capsular biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D LF888_06070 hypothetical protein K07266 kpsC; capsular polysaccharide export protein
D LF888_04005 OmpW family protein K07275 ompW; outer membrane protein
D LF888_03310 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
C 99994 Others
D LF888_01930 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D LF888_04935 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
B
B 09194 Poorly characterized
C 99996 General function prediction only
D LF888_02485 tRNA-binding protein K06878 K06878; tRNA-binding protein
D LF888_04385 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D LF888_01835 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D LF888_05230 rhodanese domain-containing protein K07146 K07146; UPF0176 protein
C 99997 Function unknown
D LF888_00670 hypothetical protein K06867 K06867; uncharacterized protein
D LF888_01625 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D LF888_05940 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D LF888_04570 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D LF888_06900 Bax inhibitor-1/YccA family protein K06890 K06890; uncharacterized protein
D LF888_05380 hypothetical protein K06893 K06893; uncharacterized protein
D LF888_04650 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein
D LF888_02760 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D LF888_06415 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D LF888_04245 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D LF888_03155 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D LF888_05750 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D LF888_01025 HEPN domain-containing protein K07076 K07076; uncharacterized protein
D LF888_01920 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein
D LF888_04300 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein
D LF888_02980 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D LF888_02535 DUF167 domain-containing protein K09131 K09131; uncharacterized protein
D LF888_03815 DUF1284 domain-containing protein K09706 K09706; uncharacterized protein
D LF888_01240 Trm112 family protein K09791 K09791; uncharacterized protein
D LF888_01655 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D LF888_02565 ClpXP protease specificity-enhancing factor SspB K09985 K09985; uncharacterized protein
D LF888_04100 DUF1013 domain-containing protein K09987 K09987; uncharacterized protein
D LF888_01630 DUF2497 domain-containing protein K09991 K09991; uncharacterized protein
D LF888_04505 mitochondrial fission ELM1 family protein K07276 K07276; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 20, 2024