+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Methanocella conradii

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D Mtc_1797 Protein implicated in ribosomal biogenesis, Nop56p-like protein K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs D Mtc_m4 putative Zn-ribbon RNA-binding protein (Nop10p family) K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase C Kinase C Other 90S particles D Mtc_1755 universal archaeal KH domain protein K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases D Mtc_1754 Putative Serine/threonine protein kinase involved in cell cycle control K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Mtc_2311 serine/threonine protein kinase K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D Mtc_1871 putative nucleotide kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D Mtc_2489 hypothetical protein K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] C Other pre-40S particles D Mtc_0004 putative ATPase, RNase L inhibitor(RLI)-like protein K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases D Mtc_2424 putative GTPase K06943 NOG1; nucleolar GTP-binding protein C RNases D RNase MRP E Mtc_1331 rnp1; ribonuclease P protein subunit Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E Mtc_0870 rnp2; ribonuclease P protein subunit Rpp14 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E Mtc_0351 rnp3; RNase P/RNase MRP subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] C Kinases C Export and cytoplasmic maturation factors D Mtc_0439 aif6; translation initiation factor eIF-6, putative K03264 EIF6; translation initiation factor 6 D Mtc_2505 NMD protein affecting ribosome stability and mRNA decay K07562 NMD3; 60S ribosomal export protein NMD3 D Mtc_0868 rRNA metabolism protein, SBDS family K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D Mtc_0225 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Mtc_0227 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Mtc_0260 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles D Mtc_1583 Protein involved in ribosomal biogenesis K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 B Other ribosome biogenesis factors C Mtc_0671 small GTP-binding domain protein K03595 era; GTPase # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D Mtc_1797 Protein implicated in ribosomal biogenesis, Nop56p-like protein K14564 NOP56; nucleolar protein 56 D Mtc_1799 flpA; rRNA 2'-O-methyltransferase fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D Mtc_1910 rpl7ae; LSU ribosomal protein L7AE K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D Mtc_0857 snoRNP protein GAR1 K07569 gar1; RNA-binding protein D Mtc_m4 putative Zn-ribbon RNA-binding protein (Nop10p family) K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors C Mtc_2149 NusA family KH domain protein, archaeal K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D Mtc_2251 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Mtc_2242 putative rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D Mtc_1976 rrmJ; 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Mtc_2242 putative rRNA methylase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] B ribosomal protein modification factors C Mtc_0515 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C Mtc_1126 Acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C Mtc_1089 Acetyltransferase, including N-acetylases of ribosomal protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] B rRNA processing factors B rRNA helicases C Mtc_1998 Superfamily II DNA and RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C Mtc_0671 small GTP-binding domain protein K03595 era; GTPase C Mtc_0091 hflX; GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C Mtc_1566 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C Mtc_2172 putative RNA-binding protein containing KH domain, possibly ribosomal protein K07574 yhbY; RNA-binding protein C Mtc_2105 putative GTPase, probable translation factor K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 22, 2025