+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Myxococcus fulvus

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D MFUL124B02_22475 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D MFUL124B02_21610 metallophosphoesterase K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] D MFUL124B02_16415 serine/threonine protein phosphatase K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase C Other 90S particles B Pre-40S particles C Kinases D MFUL124B02_14720 hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D MFUL124B02_41250 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C MFUL124B02_34655 ATPase AAA K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C MFUL124B02_22465 era; GTPase Era K03595 era; GTPase C MFUL124B02_08230 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C MFUL124B02_25700 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor C MFUL124B02_33270 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor C MFUL124B02_40905 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor C MFUL124B02_18755 DksA K06204 dksA; RNA polymerase-binding transcription factor C MFUL124B02_12690 antitermination factor NusA K02600 nusA; transcription termination/antitermination protein NusA C MFUL124B02_28640 transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB C MFUL124B02_19130 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D MFUL124B02_09625 RsuA family pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D MFUL124B02_12625 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D MFUL124B02_07880 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D MFUL124B02_11870 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D MFUL124B02_16240 SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D MFUL124B02_24510 SAM-dependent methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D MFUL124B02_06605 16S rRNA methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D MFUL124B02_43215 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D MFUL124B02_32690 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D MFUL124B02_23640 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D MFUL124B02_22720 hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D MFUL124B02_27990 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D MFUL124B02_19080 RNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D MFUL124B02_18585 50S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D MFUL124B02_07030 50S rRNA methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D MFUL124B02_25300 pseudouridine synthase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D MFUL124B02_30580 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D MFUL124B02_32500 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D MFUL124B02_12275 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D MFUL124B02_17575 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D MFUL124B02_12490 oxidoreductase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264] D MFUL124B02_34820 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D MFUL124B02_08165 RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D MFUL124B02_31670 methyltransferase K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D MFUL124B02_23680 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D MFUL124B02_37425 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D MFUL124B02_07255 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D MFUL124B02_11345 50S rRNA methyltransferase K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224] D MFUL124B02_27990 RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D MFUL124B02_22315 SAM-dependent methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D MFUL124B02_34835 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D MFUL124B02_40140 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D MFUL124B02_22020 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D MFUL124B02_15365 RsuA family pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D MFUL124B02_22685 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D MFUL124B02_34400 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D MFUL124B02_19650 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MFUL124B02_24875 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MFUL124B02_32245 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MFUL124B02_06425 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MFUL124B02_07970 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MFUL124B02_16090 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C MFUL124B02_25210 alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C MFUL124B02_38760 acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C MFUL124B02_01910 alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C MFUL124B02_19070 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] C MFUL124B02_02075 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] C MFUL124B02_23665 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM C MFUL124B02_08250 ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] C MFUL124B02_15270 YcaO-like fatty acid binding domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C MFUL124B02_06640 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C MFUL124B02_22475 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] C MFUL124B02_20415 hypothetical protein K08300 rne; ribonuclease E [EC:3.1.26.12] C MFUL124B02_32865 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] C MFUL124B02_33815 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C MFUL124B02_38205 RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] C MFUL124B02_21605 heavy metal transporter K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C MFUL124B02_34135 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C MFUL124B02_22465 era; GTPase Era K03595 era; GTPase C MFUL124B02_14415 ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C MFUL124B02_22460 GTP-binding protein Der K03977 engA; GTPase C MFUL124B02_08230 GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] C MFUL124B02_26830 GTP-binding protein HflX K03665 hflX; GTPase C MFUL124B02_07645 GTP-binding protein HflX K03665 hflX; GTPase B Other maturation factors C MFUL124B02_09150 translation factor Sua5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C MFUL124B02_25680 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C MFUL124B02_01635 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C MFUL124B02_12710 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C MFUL124B02_12685 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C MFUL124B02_07035 hypothetical protein K09710 ybeB; ribosome-associated protein C MFUL124B02_28515 rRNA maturation factor K07042 ybeY; probable rRNA maturation factor C MFUL124B02_06445 RNA-binding protein K07574 yhbY; RNA-binding protein C MFUL124B02_31010 ribosomal biogenesis GTPase K05808 hpf; ribosome hibernation promoting factor C MFUL124B02_06240 ribosomal biogenesis GTPase K05808 hpf; ribosome hibernation promoting factor C MFUL124B02_02430 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase C MFUL124B02_28705 ribosomal protein L32p K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024