+E Transcription factors KO #

  Transcription Factors - Mannheimia haemolytica 89010807N

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D WC39_07655 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D WC39_09925 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE C LysR family D WC39_02795 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D WC39_09640 transcriptional regulator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D WC39_08565 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D WC39_12010 transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D WC39_02815 cysB; CysB family transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D WC39_07290 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D WC39_12940 cell density-dependent motility repressor K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT C DeoR family D WC39_05145 transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D WC39_13650 DeoR faimly transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D WC39_13520 srlR; transcriptional regulator K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D WC39_00955 transcriptional regulator K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor C LacI family D WC39_12960 XylR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D WC39_11470 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D WC39_07420 PurR family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D WC39_11795 sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D WC39_08485 transcriptional regulator K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D WC39_12955 transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor C GntR family D WC39_09670 fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D WC39_00575 GntR family transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D WC39_01475 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D WC39_08225 tetracycline repressor protein TetR K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D WC39_06515 AcrR family transcriptional regulator K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor D WC39_12265 slmA; division inhibitor protein K05501 slmA; TetR/AcrR family transcriptional regulator D WC39_12015 GntR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator C Lrp/AsnC family D WC39_00110 transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D WC39_07245 hypothetical protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D WC39_03415 transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family C MerR family D WC39_04330 transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D WC39_08255 transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D WC39_08270 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C Fur family D WC39_02955 Fur family transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family D WC39_02665 transcriptional regulator K21602 yiaJ; IclR family transcriptional regulator, carbohydrate utilization repressor C CRP/FNR family D WC39_12275 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D WC39_06455 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D WC39_08930 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor C ArsR family C XRE family C PadR family C Other families D WC39_12285 biotin synthase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D WC39_03615 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D WC39_05610 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D WC39_13470 Nlp family transcriptional regulator K07724 ner; Ner family transcriptional regulator D WC39_10940 DNA-binding protein K07724 ner; Ner family transcriptional regulator D WC39_12450 DNA-binding protein K07724 ner; Ner family transcriptional regulator D WC39_00050 DNA-binding protein K07724 ner; Ner family transcriptional regulator D WC39_11615 transcriptional regulator K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D WC39_13475 transcriptional regulator K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor D WC39_00905 hypothetical protein K02647 cdaR; carbohydrate diacid regulator D WC39_05445 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D WC39_12065 transcriptional repressor protein MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D WC39_12365 proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family D WC39_04150 transcription antiterminator BglG K03491 licR; probable licABCH operon transcriptional regulator C Others D WC39_04715 BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D WC39_12700 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D WC39_12695 RepB plasmid partition K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D WC39_03020 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D WC39_07255 transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D WC39_13490 mannitol operon repressor K02562 mtlR; mannitol operon repressor D WC39_06130 transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D WC39_09435 uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D WC39_07460 DNA-binding protein K07733 alpA; prophage regulatory protein D WC39_07485 transcriptional regulator K07733 alpA; prophage regulatory protein D WC39_04695 hypothetical protein K07735 algH; putative transcriptional regulator D WC39_03560 molecular chaperone DnaK K06204 dksA; RNA polymerase-binding transcription factor D WC39_07715 NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR D WC39_04535 regulatory protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D WC39_02585 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0