+D GENES KO
#
KEGG Orthology (KO) - Marinithermus hydrothermalis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:mhd00010]
D Marky_1792 N-acylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Marky_1955 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Marky_1785 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Marky_1478 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Marky_0758 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Marky_1209 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Marky_1211 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Marky_1330 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Marky_1210 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Marky_1732 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Marky_0155 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Marky_0003 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Marky_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Marky_1390 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Marky_0617 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Marky_1234 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Marky_1235 Pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Marky_0618 Dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_0697 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Marky_0696 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Marky_0239 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Marky_1370 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1612 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1817 transcriptional regulator, IclR family K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1818 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1958 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:mhd00020]
D Marky_1069 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Marky_1058 aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Marky_1438 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Marky_1855 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Marky_1856 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_0697 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Marky_0696 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Marky_1374 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Marky_1375 Succinyl-CoA ligase (ADP-forming) subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Marky_1616 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Marky_1615 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Marky_1618 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Marky_1617 succinate dehydrogenase cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Marky_1418 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Marky_1259 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Marky_1958 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Marky_0617 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Marky_1234 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Marky_1235 Pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Marky_0618 Dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:mhd00030]
D Marky_1955 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Marky_1022 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D Marky_1024 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Marky_0919 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Marky_0815 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Marky_0944 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Marky_0945 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Marky_1231 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Marky_1177 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Marky_0469 Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Marky_0650 PfkB domain protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D Marky_1862 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Marky_0395 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Marky_0642 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Marky_0679 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Marky_0758 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Marky_1478 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Marky_1785 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:mhd00040]
D Marky_0606 L-iditol 2-dehydrogenase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D Marky_1656 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Marky_0919 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Marky_1255 Aldehyde Dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D Marky_0448 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:mhd00051]
D Marky_0903 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Marky_1835 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Marky_0493 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Marky_0731 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Marky_0448 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Marky_0082 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
D Marky_0081 mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D Marky_1785 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Marky_1478 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Marky_0758 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Marky_1209 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00052 Galactose metabolism [PATH:mhd00052]
D Marky_2158 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Marky_2157 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Marky_1822 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Marky_1792 N-acylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Marky_1785 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Marky_0237 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D Marky_0902 Glycosyl hydrolase family 32 domain protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Marky_1819 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D Marky_1656 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:mhd00500]
D Marky_0902 Glycosyl hydrolase family 32 domain protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Marky_1819 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Marky_0738 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Marky_1436 4-alpha-glucanotransferase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Marky_0751 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D Marky_0750 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D Marky_1792 N-acylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Marky_1955 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Marky_0903 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:mhd00620]
D Marky_1370 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1612 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1817 transcriptional regulator, IclR family K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1818 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_0697 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Marky_0696 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Marky_0617 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Marky_1234 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Marky_1235 Pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Marky_0618 Dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1410 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Marky_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Marky_0372 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Marky_0819 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Marky_0820 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Marky_0371 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Marky_1351 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Marky_0239 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Marky_1976 D-lactate dehydrogenase (cytochrome) K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D Marky_0028 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Marky_1258 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Marky_1259 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Marky_1418 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Marky_0885 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Marky_1958 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Marky_1390 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Marky_1223 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_0959 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Marky_0960 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Marky_0673 homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14]
D Marky_0365 beta-lactamase domain protein
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mhd00630]
D Marky_1224 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D Marky_1223 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D Marky_1259 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Marky_1069 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Marky_1058 aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Marky_1370 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1612 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1817 transcriptional regulator, IclR family K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1818 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_2148 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Marky_0409 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Marky_1003 Methylmalonyl-CoA mutase domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Marky_1004 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Marky_1414 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Marky_1037 D-lactate dehydrogenase (cytochrome) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Marky_0417 FAD linked oxidase domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D Marky_1549 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Marky_0871 Glyoxylate reductase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Marky_1509 Alanine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Marky_1283 Glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D Marky_1019 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Marky_0482 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Marky_0787 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Marky_0788 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Marky_0785 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_0786 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Marky_0679 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Marky_0946 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Marky_1513 Arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
C 00640 Propanoate metabolism [PATH:mhd00640]
D Marky_1370 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1612 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1817 transcriptional regulator, IclR family K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1818 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1410 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Marky_0710 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Marky_0709 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Marky_0708 Dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_0372 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Marky_0819 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Marky_0820 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Marky_0371 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Marky_1080 Acetylornithine/succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Marky_0409 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Marky_1003 Methylmalonyl-CoA mutase domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Marky_1004 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Marky_1414 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Marky_1375 Succinyl-CoA ligase (ADP-forming) subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Marky_1374 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Marky_1069 2-methylcitrate synthase/citrate synthase II K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D Marky_0163 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D Marky_1058 aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Marky_0162 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D Marky_1224 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D Marky_0239 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Marky_0332 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:mhd00650]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_0879 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Marky_1267 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Marky_1387 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_0923 Enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_1486 Butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Marky_1487 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Marky_2148 MaoC domain protein dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
D Marky_0946 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D Marky_1616 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Marky_1615 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Marky_1618 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Marky_1617 succinate dehydrogenase cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Marky_1080 Acetylornithine/succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Marky_0935 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Marky_0697 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Marky_0696 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Marky_0917 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Marky_0025 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Marky_0956 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Marky_0957 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:mhd00660]
D Marky_0956 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Marky_0957 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Marky_1375 Succinyl-CoA ligase (ADP-forming) subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Marky_1374 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Marky_0954 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Marky_0953 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Marky_0952 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:mhd00562]
D Marky_1038 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Marky_0943 Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Marky_0947 Myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D Marky_0948 Acetolactate synthase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D Marky_0942 myo-inositol catabolism IolB domain protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D Marky_1209 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:mhd00190]
D Marky_0504 NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Marky_0505 NAD(P)H-quinone oxidoreductase subunit K K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Marky_0506 NAD(P)H-quinone oxidoreductase subunit J K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Marky_0507 NAD(P)H-quinone oxidoreductase subunit H K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Marky_0508 NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Marky_0509 NADH-quinone oxidoreductase, F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Marky_0510 NADH-quinone oxidoreductase, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Marky_0511 NADH dehydrogenase (quinone) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Marky_0512 NAD(P)H-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D Marky_0513 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Marky_0514 NADH-ubiquinone oxidoreductase chain 4L K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Marky_0515 proton-translocating NADH-quinone oxidoreductase, chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Marky_0516 proton-translocating NADH-quinone oxidoreductase, chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Marky_0517 proton-translocating NADH-quinone oxidoreductase, chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Marky_0574 NADH dehydrogenase (ubiquinone) K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Marky_1616 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Marky_1615 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Marky_1618 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Marky_1617 succinate dehydrogenase cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Marky_1959 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Marky_1962 cytochrome c oxidase, subunit IV K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D Marky_1963 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Marky_1964 cytochrome c oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D Marky_0361 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Marky_1501 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Marky_1965 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D Marky_1961 cytochrome c oxidase, subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D Marky_0357 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Marky_1034 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Marky_1502 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Marky_1960 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Marky_1966 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D Marky_2012 cytochrome c class I K08738 CYC; cytochrome c
D Marky_1600 V-type ATP synthase alpha chain K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D Marky_1599 V-type ATP synthase beta chain K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D Marky_1602 V-type ATP synthase subunit C K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D Marky_1598 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D Marky_1603 V-type proton ATPase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D Marky_1601 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D Marky_1605 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D Marky_1604 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D Marky_0054 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:mhd00710]
D Marky_1210 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Marky_1211 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Marky_1330 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Marky_1478 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Marky_0815 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Marky_0944 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Marky_0945 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Marky_1177 Ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D Marky_1209 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Marky_0919 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Marky_1231 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Marky_0885 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Marky_1958 Phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Marky_1390 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Marky_1259 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:mhd00720]
D Marky_1390 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Marky_0885 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Marky_1259 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Marky_1418 Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Marky_1616 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Marky_1615 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Marky_1618 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Marky_1617 succinate dehydrogenase cytochrome b subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Marky_1374 succinyl-CoA synthetase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Marky_1375 Succinyl-CoA ligase (ADP-forming) subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_0697 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Marky_0696 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Marky_1438 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Marky_1058 aconitate hydratase 1 K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Marky_0372 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Marky_0819 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Marky_0820 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Marky_0371 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Marky_0409 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Marky_1004 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Marky_1414 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Marky_1003 Methylmalonyl-CoA mutase domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Marky_0823 Bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Marky_1160 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Marky_1410 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Marky_1370 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1612 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1817 transcriptional regulator, IclR family K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1818 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:mhd00680]
D Marky_0482 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Marky_1509 Alanine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Marky_0679 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Marky_0003 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Marky_0885 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D Marky_1259 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Marky_0758 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11]
D Marky_1478 fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D Marky_1785 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Marky_1410 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Marky_1370 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1612 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1817 transcriptional regulator, IclR family K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1818 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1732 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Marky_0155 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Marky_1168 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Marky_0918 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D Marky_0962 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
D Marky_0672 3-isopropylmalate dehydratase large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D Marky_0671 3-isopropylmalate dehydratase small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
C 00910 Nitrogen metabolism [PATH:mhd00910]
D Marky_1844 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Marky_1848 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1847 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1845 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1807 Nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D Marky_1808 Nitrate reductase cytochrome c-type subunit (NapB) K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D Marky_0377 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Marky_0810 Glutamate dehydrogenase (NAD(P)(+)) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Marky_0811 Glutamate dehydrogenase (NAD(P)(+)) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Marky_1019 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Marky_1283 Glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
C 00920 Sulfur metabolism [PATH:mhd00920]
D Marky_1832 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Marky_1865 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Marky_1831 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Marky_0676 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Marky_1868 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D Marky_0518 CoA-disulfide reductase K18367 CoADR; CoA-dependent NAD(P)H sulfur oxidoreductase [EC:1.8.1.18]
D Marky_0027 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Marky_1331 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Marky_0637 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Marky_0988 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Marky_0572 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Marky_0634 Cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:mhd00061]
D Marky_0372 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Marky_0819 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Marky_0820 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Marky_0371 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Marky_0842 Acyl carrier protein K02078 acpP; acyl carrier protein
D Marky_0844 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Marky_0845 3-oxoacyl-(acyl-carrier-protein) synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Marky_1880 3-oxoacyl-(acyl-carrier-protein) synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Marky_2144 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Marky_0841 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Marky_0729 dihydropteridine reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_0843 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_1670 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_0343 (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Marky_0351 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Marky_1306 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1388 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1389 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:mhd00071]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_0041 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_1386 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_1387 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Marky_0040 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Marky_1644 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Marky_1588 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Marky_1306 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1388 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1389 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:mhd00074]
D Marky_1667 Holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Marky_0842 Acyl carrier protein K02078 acpP; acyl carrier protein
D Marky_0844 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:mhd00561]
D Marky_0679 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Marky_0660 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Marky_0414 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Marky_1001 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_1570 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_1761 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_0426 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Marky_1243 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00564 Glycerophospholipid metabolism [PATH:mhd00564]
D Marky_1901 Glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Marky_0659 Glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D Marky_1001 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_1570 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_1761 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_0426 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Marky_1988 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Marky_1194 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Marky_0936 glycerophosphoryl diester phosphodiesterase
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:mhd00592]
D Marky_0041 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_1386 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:mhd00230]
D Marky_1100 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Marky_1439 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Marky_1862 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Marky_0395 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Marky_0642 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Marky_0561 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Marky_1565 Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Marky_1566 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Marky_0562 Phosphoribosylformylglycinamidine synthase 2 K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Marky_0565 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Marky_0564 Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Marky_2213 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Marky_1688 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Marky_1689 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Marky_0566 Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Marky_0567 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Marky_0905 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Marky_0092 Multifunctional protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Marky_0893 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Marky_0922 Purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Marky_2115 Multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Marky_2089 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Marky_0232 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Marky_2235 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Marky_0639 protein of unknown function DUF84 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D Marky_0384 Nucleoside-triphosphatase rdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Marky_0911 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Marky_1624 Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Marky_0853 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Marky_1625 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Marky_0852 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Marky_0828 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1]
D Marky_2003 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Marky_2111 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Marky_0759 Deoxyadenosine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D Marky_0477 Adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D Marky_0884 metallophosphoesterase K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60]
D Marky_1705 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Marky_0630 NUDIX hydrolase K18445 ndx1; diadenosine hexaphosphate hydrolase (ATP-forming) [EC:3.6.1.61]
D Marky_1831 Adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D Marky_1832 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Marky_1865 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Marky_1525 phosphoribosyltransferase
D Marky_1526 phosphoribosyltransferase
C 00240 Pyrimidine metabolism [PATH:mhd00240]
D Marky_1512 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Marky_0779 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Marky_1403 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Marky_1404 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Marky_1406 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Marky_1405 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Marky_1903 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Marky_1905 Orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Marky_1197 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Marky_2235 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Marky_0467 Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Marky_1426 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Marky_0674 Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Marky_0973 Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Marky_0092 Multifunctional protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Marky_1580 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Marky_1402 Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Marky_0387 Indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D Marky_0238 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Marky_1125 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Marky_0076 Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D Marky_0853 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Marky_1625 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Marky_0852 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Marky_0759 Deoxyadenosine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D Marky_0754 Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Marky_1398 Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Marky_1352 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Marky_0884 metallophosphoesterase K24670 K24670; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / phosphoenolpyruvate phosphatase [EC:3.1.4.16 3.1.3.60]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:mhd00250]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_2092 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Marky_1509 Alanine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Marky_1253 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Marky_0776 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Marky_0777 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Marky_2111 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Marky_0567 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Marky_1403 Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Marky_1080 Acetylornithine/succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Marky_0935 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Marky_0810 Glutamate dehydrogenase (NAD(P)(+)) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Marky_0811 Glutamate dehydrogenase (NAD(P)(+)) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Marky_2140 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Marky_1019 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Marky_1512 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Marky_0779 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Marky_0564 Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Marky_0133 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Marky_0561 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:mhd00260]
D Marky_1492 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Marky_1381 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Marky_1494 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Marky_0487 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Marky_1495 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Marky_2242 Threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Marky_0482 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Marky_1509 Alanine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Marky_0679 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Marky_1732 metalloenzyme domain protein K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Marky_0155 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Marky_1168 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Marky_0621 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Marky_1094 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D Marky_0787 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Marky_0788 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Marky_0785 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_0786 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D Marky_1110 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Marky_1123 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Marky_1203 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Marky_1202 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:mhd00270]
D Marky_0637 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Marky_1159 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Marky_0623 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Marky_1409 S-adenosylmethionine decarboxylase related protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Marky_1619 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Marky_1408 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Marky_2115 Multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Marky_1095 Methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Marky_1674 Cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Marky_0635 Methyltransferase type 11 K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D Marky_0392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Marky_0393 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Marky_1492 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Marky_1381 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Marky_1494 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Marky_0487 Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Marky_0988 Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Marky_0572 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Marky_0634 Cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Marky_1165 Cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Marky_2055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_0027 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Marky_1331 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Marky_0239 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Marky_1259 Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Marky_1110 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Marky_1123 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Marky_1168 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:mhd00280]
D Marky_2055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Marky_0710 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Marky_0709 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Marky_0708 Dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_0040 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Marky_1644 Acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_0041 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_1386 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_0409 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Marky_1003 Methylmalonyl-CoA mutase domain protein K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D Marky_1004 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Marky_1414 methylmalonyl-CoA mutase, large subunit K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D Marky_0691 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Marky_0692 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Marky_0916 Methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D Marky_0917 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:mhd00290]
D Marky_0954 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Marky_0953 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Marky_0952 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Marky_0956 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Marky_0957 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Marky_0958 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Marky_0950 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Marky_2055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Marky_0959 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Marky_0960 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:mhd00300]
D Marky_1494 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Marky_1492 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Marky_1381 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Marky_1261 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Marky_0673 homocitrate synthase K01655 LYS21; homocitrate synthase [EC:2.3.3.14]
D Marky_0672 3-isopropylmalate dehydratase large subunit K16792 aksD; methanogen homoaconitase large subunit [EC:4.2.1.114]
D Marky_0671 3-isopropylmalate dehydratase small subunit K16793 aksE; methanogen homoaconitase small subunit [EC:4.2.1.114]
D Marky_1533 3-isopropylmalate dehydrogenase K05824 LYS12; homoisocitrate dehydrogenase [EC:1.1.1.87]
D Marky_0669 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D Marky_0668 lysine biosynthesis enzyme LysX K05827 lysX; [lysine-biosynthesis-protein LysW]---L-2-aminoadipate ligase [EC:6.3.2.43]
D Marky_0666 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D Marky_0667 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D Marky_0665 Acetylornithine/succinyldiaminopimelate aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Marky_0663 Acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
D Marky_0756 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Marky_1444 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:mhd00310]
D Marky_1856 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1588 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_1162 Acetylornithine/succinyldiaminopimelate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Marky_0935 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Marky_1461 ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00220 Arginine biosynthesis [PATH:mhd00220]
D Marky_1757 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Marky_0776 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Marky_0777 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Marky_0850 arginase K01476 rocF; arginase [EC:3.5.3.1]
D Marky_0564 Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Marky_1019 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Marky_1512 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Marky_0779 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Marky_0810 Glutamate dehydrogenase (NAD(P)(+)) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Marky_0811 Glutamate dehydrogenase (NAD(P)(+)) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_0778 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Marky_1755 Arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Marky_0535 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Marky_1756 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Marky_0669 lysine biosynthesis protein LysW K05826 lysW; alpha-aminoadipate/glutamate carrier protein LysW
D Marky_0666 acetylglutamate kinase K05828 lysZ; [amino group carrier protein]-L-2-aminoadipate/L-glutamate 6-kinase [EC:2.7.2.17 2.7.2.19]
D Marky_0667 N-acetyl-gamma-glutamyl-phosphate reductase K05829 lysY; [amino group carrier protein]-6-phospho-L-2-aminoadipate/5-phospho-L-glutamate reductase [EC:1.2.1.103 1.2.1.106]
D Marky_0665 Acetylornithine/succinyldiaminopimelate aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Marky_0663 Acetyl-lysine deacetylase K05831 lysK; [amino group carrier protein]-lysine/ornithine hydrolase [EC:3.5.1.130 3.5.1.132]
C 00330 Arginine and proline metabolism [PATH:mhd00330]
D Marky_0622 Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Marky_1686 agmatinase K27683 apauh; N1-aminopropylagmatine ureohydrolase [EC:3.5.3.24]
D Marky_1408 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Marky_1409 S-adenosylmethionine decarboxylase related protein K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Marky_1619 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Marky_1162 Acetylornithine/succinyldiaminopimelate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Marky_0231 Agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D Marky_0240 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Marky_0850 arginase K01476 rocF; arginase [EC:3.5.3.1]
D Marky_1189 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Marky_2141 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D Marky_2140 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Marky_1887 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Marky_1888 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Marky_0450 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_1461 ornithine cyclodeaminase/mu-crystallin K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:mhd00340]
D Marky_0139 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Marky_0138 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Marky_1477 Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Marky_0649 Imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Marky_1476 Imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Marky_0648 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Marky_0647 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Marky_1873 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Marky_1000 Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Marky_1006 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D Marky_2057 Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D Marky_2056 Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
C 00350 Tyrosine metabolism [PATH:mhd00350]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_0647 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Marky_1927 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Marky_1264 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D Marky_1265 flavin reductase domain protein FMN-binding protein K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D Marky_1263 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D Marky_1262 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D Marky_0935 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D Marky_1642 Tryptophanase K01668 E4.1.99.2; tyrosine phenol-lyase [EC:4.1.99.2]
C 00360 Phenylalanine metabolism [PATH:mhd00360]
D Marky_1927 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Marky_1274 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Marky_1272 phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D Marky_1366 phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D Marky_1367 phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D Marky_1368 phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D Marky_1369 phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D Marky_1280 Enoyl-CoA hydratase/isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_0879 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Marky_1267 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_0647 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Marky_0240 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Marky_1898 Rieske (2Fe-2S) iron-sulfur domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:mhd00380]
D Marky_1513 Arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D Marky_1856 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1588 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_1927 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Marky_0240 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:mhd00400]
D Marky_1146 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Marky_0119 phospho-2-dehydro-3-deoxyheptonate aldolase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D Marky_1545 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Marky_1546 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Marky_1544 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Marky_0675 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Marky_1543 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Marky_0254 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Marky_0253 response regulator receiver protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Marky_0250 Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Marky_0127 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Marky_1308 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Marky_1203 Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Marky_1202 Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Marky_1170 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D Marky_1145 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Marky_1353 Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_0647 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:mhd00410]
D Marky_1339 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Marky_1080 Acetylornithine/succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Marky_0235 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00430 Taurine and hypotaurine metabolism [PATH:mhd00430]
D Marky_2236 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Marky_1253 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D Marky_1410 Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D Marky_2166 beta-lactamase domain protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:mhd00450]
D Marky_0572 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Marky_0634 Cystathionine gamma-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D Marky_1159 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D Marky_1674 Cystathionine gamma-synthase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D Marky_1899 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Marky_0044 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Marky_1832 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Marky_1865 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Marky_1180 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:mhd00460]
D Marky_2236 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Marky_0482 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:mhd00470]
D Marky_1769 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Marky_0398 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Marky_0564 Phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Marky_0382 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Marky_1447 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Marky_2170 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
C 00480 Glutathione metabolism [PATH:mhd00480]
D Marky_2236 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Marky_2186 UPF0271 protein ybgL K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Marky_0570 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Marky_1438 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Marky_1024 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D Marky_1408 Spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mhd00520]
D Marky_0116 Bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Marky_1582 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Marky_0052 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Marky_1451 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Marky_1811 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Marky_1137 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Marky_0133 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Marky_0903 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Marky_1955 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Marky_1835 Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Marky_1792 N-acylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Marky_1656 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Marky_2158 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Marky_2157 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Marky_1822 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Marky_0493 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Marky_0731 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Marky_0738 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Marky_1854 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_2075 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:mhd00541]
D Marky_0116 Bifunctional protein glmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Marky_1582 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Marky_1654 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Marky_1653 GHMP kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D Marky_1656 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Marky_0738 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Marky_1854 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_2075 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_1852 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Marky_1853 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Marky_2077 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Marky_0493 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Marky_0731 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:mhd00540]
D Marky_0344 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Marky_0341 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Marky_0340 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
C 00542 O-Antigen repeat unit biosynthesis [PATH:mhd00542]
D Marky_1581 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:mhd00550]
D Marky_0052 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Marky_1451 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Marky_1450 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Marky_1447 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Marky_0756 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Marky_0398 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Marky_1444 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Marky_1195 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Marky_0770 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Marky_1446 glycosyl transferase family 4 K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Marky_1449 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Marky_1448 cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_1083 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_0464 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Marky_1443 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:mhd00552]
D Marky_0770 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Marky_1581 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Marky_0961 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Marky_0268 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Marky_1243 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Marky_1826 glycosyl transferase, WecB/TagA/CpsF family
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
D Marky_1581 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00543 Exopolysaccharide biosynthesis [PATH:mhd00543]
D Marky_1581 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Marky_0494 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:mhd00730]
D Marky_1745 Phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Marky_1746 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Marky_1391 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Marky_1317 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Marky_1744 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D Marky_2048 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Marky_1743 Thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Marky_1741 Thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Marky_0963 Thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Marky_0225 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Marky_1705 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Marky_1936 TENA/THI-4 domain-containing protein K20896 TENA_E; formylaminopyrimidine deformylase / aminopyrimidine aminohydrolase [EC:3.5.1.- 3.5.99.-]
C 00740 Riboflavin metabolism [PATH:mhd00740]
D Marky_1639 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Marky_1641 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Marky_1638 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Marky_1640 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Marky_1099 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Marky_1265 flavin reductase domain protein FMN-binding protein K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D Marky_1100 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Marky_1439 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Marky_0219 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:mhd00750]
D Marky_1947 Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D Marky_1495 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Marky_1228 Pyridoxal biosynthesis lyase pdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Marky_1227 Glutamine amidotransferase subunit pdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:mhd00760]
D Marky_2092 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Marky_2091 Quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Marky_2090 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Marky_0319 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Marky_0893 purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Marky_0922 Purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Marky_0092 Multifunctional protein surE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Marky_0266 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Marky_0213 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Marky_0485 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Marky_0614 NAD(P)(+) transhydrogenase (AB-specific) K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Marky_0615 pyruvate kinase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D Marky_0616 NAD(P)(+) transhydrogenase (AB-specific) K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D Marky_0935 Succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:mhd00770]
D Marky_0956 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Marky_0957 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Marky_0958 Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Marky_0950 Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Marky_0497 3-methyl-2-oxobutanoatehydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Marky_0498 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Marky_0235 Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Marky_1890 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Marky_1622 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Marky_1342 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Marky_1186 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Marky_1667 Holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Marky_2055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Marky_1339 Aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:mhd00780]
D Marky_0841 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Marky_0729 dihydropteridine reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_0843 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_1670 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_0343 (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Marky_0351 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Marky_1881 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Marky_1879 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Marky_1878 Dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Marky_1882 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Marky_1884 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:mhd00785]
D Marky_0695 Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D Marky_0694 Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_0617 2-oxo-acid dehydrogenase E1 subunit, homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D Marky_1234 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D Marky_1235 Pyruvate dehydrogenase (acetyl-transferring) K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D Marky_0618 Dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D Marky_1855 2-oxoglutarate dehydrogenase, E1 subunit K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D Marky_1856 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D Marky_0710 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D Marky_0709 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D Marky_0708 Dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D Marky_0787 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Marky_0788 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Marky_0785 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Marky_0786 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:mhd00790]
D Marky_0730 GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D Marky_0291 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D Marky_0290 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Marky_0292 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Marky_0288 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Marky_1009 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Marky_1639 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Marky_0658 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Marky_0775 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Marky_0657 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Marky_0656 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Marky_0781 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Marky_0066 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Marky_2161 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Marky_0307 molybdopterin converting factor, subunit 1 K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D Marky_0063 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Marky_0128 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Marky_0585 Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:mhd00670]
D Marky_0823 Bifunctional protein folD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Marky_0482 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Marky_1566 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Marky_0905 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Marky_0785 Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D Marky_1352 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Marky_1160 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Marky_0536 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D Marky_0748 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D Marky_0623 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Marky_0392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Marky_0787 glycine dehydrogenase (decarboxylating) subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D Marky_0788 glycine dehydrogenase (decarboxylating) subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_0786 Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:mhd00860]
D Marky_0769 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Marky_1684 Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Marky_1347 Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Marky_0834 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Marky_0286 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Marky_1685 Uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Marky_1870 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Marky_1143 Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Marky_1141 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D Marky_1142 Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Marky_1866 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Marky_1869 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Marky_0519 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D Marky_1959 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Marky_1996 Cobyrinic acid A,C-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Marky_1767 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Marky_1994 Cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Marky_1992 Cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Marky_1993 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Marky_1933 magnesium protoporphyrin chelatase putative K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D Marky_1736 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mhd00130]
D Marky_1340 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Marky_0272 menaquinone biosynthesis decarboxylase, SCO4490 family K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Marky_0219 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Marky_0207 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Marky_0024 o-succinylbenzoic acid (OSB) synthetase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D Marky_1147 phenylacetic acid degradation-related protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D Marky_1484 protein of unknown function DUF178 K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D Marky_1483 putative menaquinone biosynthesis protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D Marky_1173 S-adenosylhomocysteine deaminase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D Marky_0101 futalosine nucleosidase K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D Marky_1174 menaquinone biosynthesis protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D Marky_0102 protein of unknown function DUF191 K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:mhd00900]
D Marky_2048 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Marky_1193 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Marky_0220 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Marky_0221 4-diphosphocytidyl-2-C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Marky_1938 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Marky_1797 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Marky_0555 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_0219 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Marky_0055 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Marky_0809 Geranyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Marky_1195 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:mhd00907]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_0917 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Marky_0041 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_1386 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Marky_0815 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Marky_0944 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Marky_0945 Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:mhd00523]
D Marky_1854 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_2075 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_1852 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Marky_1853 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Marky_2077 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Marky_1852 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:mhd00311]
D Marky_2050 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D Marky_1954 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis [PATH:mhd00332]
D Marky_1887 Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Marky_1888 Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:mhd00261]
D Marky_1832 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Marky_1865 Sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D Marky_1492 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Marky_1381 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Marky_1261 Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:mhd00521]
D Marky_1792 N-acylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
D Marky_1038 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Marky_0943 Inositol 2-dehydrogenase K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D Marky_1854 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_2075 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_1852 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Marky_1853 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Marky_2077 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Marky_1792 N-acylmannosamine kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:mhd00525]
D Marky_1854 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_2075 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Marky_1852 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:mhd00401]
D Marky_1145 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_0647 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Marky_0254 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Marky_0253 response regulator receiver protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Marky_0844 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Marky_0729 dihydropteridine reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_0843 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_1670 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_0351 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Marky_0842 Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Marky_0623 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:mhd00362]
D Marky_2146 alpha/beta hydrolase fold protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D Marky_0041 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_1386 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_0712 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Marky_0435 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Marky_1843 Carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D Marky_1387 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Marky_1588 Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D Marky_0879 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Marky_1267 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:mhd00627]
D Marky_0240 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Marky_1351 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Marky_0219 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D Marky_0881 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:mhd00361]
D Marky_0712 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D Marky_0881 haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:mhd00622]
D Marky_0712 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D Marky_0041 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_1386 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:mhd00643]
D Marky_0240 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D Marky_0712 Glyoxalase/bleomycin resistance protein/dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D Marky_1278 Enoyl-CoA hydratase/isomerase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:mhd00984]
D Marky_0041 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Marky_1386 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:mhd03020]
D Marky_0446 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Marky_0447 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Marky_1698 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Marky_1623 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:mhd03010]
D Marky_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0037 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Marky_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Marky_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Marky_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Marky_2110 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Marky_1199 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Marky_1720 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Marky_1699 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Marky_1709 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Marky_0088 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Marky_1730 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Marky_1712 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Marky_0771 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Marky_1727 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Marky_1700 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Marky_1731 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Marky_1701 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Marky_1713 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Marky_0799 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Marky_1522 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Marky_1717 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Marky_0086 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Marky_1722 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Marky_0461 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Marky_0462 hypothetical protein K19033 PSRP4; 30S ribosomal protein S31/Thx
D Marky_0443 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Marky_1723 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Marky_1726 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Marky_1725 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Marky_1714 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Marky_1711 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Marky_0085 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Marky_0444 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Marky_0442 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Marky_0445 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Marky_0772 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Marky_1716 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Marky_1707 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Marky_1719 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Marky_1697 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Marky_1710 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Marky_1518 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Marky_0098 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Marky_0263 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Marky_1721 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Marky_1724 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Marky_1715 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Marky_0396 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Marky_0264 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Marky_0031 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Marky_1718 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Marky_1708 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Marky_1399 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Marky_0846 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Marky_0439 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Marky_0097 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Marky_1702 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:mhd00970]
D Marky_R0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Marky_R0026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Marky_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Marky_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Marky_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Marky_R0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Marky_R0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Marky_R0055 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Marky_R0017 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Marky_R0045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Marky_R0042 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Marky_R0002 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Marky_R0025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Marky_R0003 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Marky_R0004 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Marky_R0008 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Marky_R0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Marky_R0034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Marky_R0056 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Marky_R0040 tRNA-His K14226 tRNA-His; tRNA His
D Marky_R0049 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Marky_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0011 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Marky_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Marky_R0024 tRNA-Met K14230 tRNA-Met; tRNA Met
D Marky_R0027 tRNA-Met K14230 tRNA-Met; tRNA Met
D Marky_R0051 tRNA-Met K14230 tRNA-Met; tRNA Met
D Marky_R0052 tRNA-Met K14230 tRNA-Met; tRNA Met
D Marky_R0018 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Marky_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Marky_R0035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Marky_R0036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Marky_R0013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Marky_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Marky_R0030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Marky_R0031 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Marky_R0019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Marky_R0022 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Marky_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Marky_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Marky_R0020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Marky_R0005 tRNA-Val K14237 tRNA-Val; tRNA Val
D Marky_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val
D Marky_R0044 tRNA-Val K14237 tRNA-Val; tRNA Val
D Marky_R0053 tRNA-Val K14237 tRNA-Val; tRNA Val
D Marky_0769 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Marky_0968 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Marky_2211 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Marky_1249 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Marky_1626 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Marky_0600 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Marky_2036 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Marky_1221 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Marky_1319 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Marky_1226 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Marky_1379 Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Marky_1380 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Marky_1504 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Marky_1250 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Marky_1155 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Marky_1180 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Marky_1858 Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Marky_0868 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Marky_1980 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Marky_1232 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Marky_1108 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Marky_0762 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Marky_2124 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Marky_1220 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Marky_1782 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Marky_1783 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Marky_0459 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Marky_1052 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
D Marky_1577 double-stranded RNA binding domain protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:mhd03060]
D Marky_1706 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Marky_0440 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Marky_1564 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Marky_0864 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Marky_1041 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Marky_1457 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Marky_1523 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Marky_R0060 RNA component of signal recognition particle K01983 ffs; signal recognition particle 4.5S RNA
D Marky_0768 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Marky_0117 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Marky_1085 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Marky_0118 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Marky_1074 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Marky_0032 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
D Marky_0026 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Marky_0156 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Marky_0157 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Marky_1397 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:mhd04122]
D Marky_1391 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Marky_0027 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Marky_1331 Thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D Marky_0573 tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Marky_0066 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Marky_0307 molybdopterin converting factor, subunit 1 K21142 moaX; MoaE-MoaD fusion protein [EC:2.8.1.12]
D Marky_1068 UBA/THIF-type NAD/FAD binding protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D Marky_2161 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Marky_0063 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Marky_1317 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Marky_0476 thiamineS protein K03154 thiS; sulfur carrier protein
D Marky_1742 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:mhd03018]
D Marky_0003 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Marky_0798 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Marky_1161 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Marky_0129 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Marky_0171 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Marky_1230 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Marky_0338 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Marky_0797 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Marky_1785 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Marky_0431 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Marky_0717 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Marky_1185 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:mhd03030]
D Marky_0969 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_1812 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_0569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Marky_2165 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Marky_0202 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Marky_1589 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Marky_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Marky_0084 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Marky_0889 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Marky_0087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Marky_0915 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Marky_0298 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Marky_1136 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Marky_0991 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:mhd03410]
D Marky_2125 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Marky_0210 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Marky_0858 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Marky_1876 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Marky_0908 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Marky_1649 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Marky_1206 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Marky_1136 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Marky_0866 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Marky_0991 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:mhd03420]
D Marky_1239 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Marky_1886 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D Marky_0136 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D Marky_0763 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D Marky_1312 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Marky_1136 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Marky_0991 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:mhd03430]
D Marky_1489 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D Marky_2074 MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2
D Marky_1488 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D Marky_1312 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Marky_0866 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Marky_0087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Marky_0569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Marky_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Marky_2165 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Marky_1589 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Marky_0202 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Marky_0969 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_1812 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_0991 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:mhd03440]
D Marky_0866 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Marky_0087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Marky_2053 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D Marky_1005 Recombination protein O RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Marky_0836 Recombination protein recR K06187 recR; recombination protein RecR
D Marky_0337 Protein recA K03553 recA; recombination protein RecA
D Marky_1136 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Marky_1354 Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D Marky_0492 Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Marky_1092 Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Marky_0309 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Marky_0873 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Marky_1118 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Marky_0569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Marky_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Marky_2165 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Marky_1589 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Marky_0202 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Marky_0969 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_1812 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_2233 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:mhd02010]
D Marky_1088 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Marky_1087 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Marky_1086 Polyamine-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Marky_0065 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Marky_1733 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Marky_2225 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Marky_1734 ABC-type transporter, integral membrane subunit K02011 afuB; iron(III) transport system permease protein
D Marky_2226 ABC-type transporter, integral membrane subunit K02011 afuB; iron(III) transport system permease protein
D Marky_1735 Fe(3+)-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Marky_2227 spermidine/putrescine ABC transporter ATPase subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Marky_0222 ABC transporter, periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein
D Marky_0223 ABC-type transporter, integral membrane subunit K02063 thiP; thiamine transport system permease protein
D Marky_0056 ABC-type glycine betaine transport, periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Marky_0057 ABC-type transporter, integral membrane subunit K02001 proW; glycine betaine/proline transport system permease protein
D Marky_0058 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Marky_1517 ABC-type glycine betaine transport, periplasmic subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D Marky_1514 ABC-type transporter, integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D Marky_1516 ABC-type transporter, integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D Marky_1515 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Marky_1332 Glycerol-3-phosphate-transporting ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Marky_1820 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Marky_0992 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Marky_0206 ABC-type transporter, integral membrane subunit K23535 nupB; general nucleoside transport system permease protein
D Marky_0205 ABC-type transporter, integral membrane subunit K23536 nupC; general nucleoside transport system permease protein
D Marky_0993 Monosaccharide-transporting ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D Marky_2154 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Marky_2155 ABC-type transporter, integral membrane subunit K17316 gtsB; glucose/mannose transport system permease protein
D Marky_2156 ABC-type transporter, integral membrane subunit K17317 gtsC; glucose/mannose transport system permease protein
D Marky_0940 extracellular solute-binding protein family 1 K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Marky_0939 ABC-type transporter, integral membrane subunit K17238 inoF; inositol-phosphate transport system permease protein
D Marky_0938 ABC-type transporter, integral membrane subunit K17239 inoG; inositol-phosphate transport system permease protein
D Marky_0937 Glycerol-3-phosphate-transporting ATPase K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Marky_1991 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Marky_2175 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Marky_1990 ABC-type transporter, integral membrane subunit K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Marky_1989 ABC-type transporter, integral membrane subunit K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Marky_0593 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Marky_0594 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Marky_0595 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Marky_0596 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Marky_0060 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D Marky_0062 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Marky_0061 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Marky_1472 ABC-type transporter, periplasmic subunit family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Marky_1471 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein
D Marky_1470 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D Marky_1469 Phosphonate-transporting ATPase K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Marky_1018 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1268 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1303 amino acid/amide ABC transporter substrate-binding protein, haat family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_2062 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_2149 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1017 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1269 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1305 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_2061 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_2150 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1016 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_1270 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1304 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_2060 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_2151 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_1015 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1307 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_2059 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_2152 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1014 Monosaccharide-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_1271 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_1302 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_2058 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_2153 Phosphonate-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_0790 ABC-type metal ion transporter, periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein
D Marky_1393 ABC-type transporter, integral membrane subunit K09816 znuB; zinc transport system permease protein
D Marky_1394 Phosphonate-transporting ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Marky_1883 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Marky_1179 putative sodium ABC transporter permease protein K09696 natB; sodium transport system permease protein
D Marky_1178 Sulfate-transporting ATPase K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Marky_2078 protein of unknown function DUF214 K09808 lolC_E_F; lipoprotein-releasing system permease protein
D Marky_0921 Phosphonate-transporting ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Marky_0454 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Marky_0453 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Marky_0452 Heme-transporting ATPase K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Marky_0406 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Marky_0405 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Marky_0473 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Marky_1463 Sulfate-transporting ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Marky_1552 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Marky_1555 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Marky_1573 Xenobiotic-transporting ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Marky_1572 Xenobiotic-transporting ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:mhd03070]
D Marky_1045 outer membrane efflux protein K12340 tolC; outer membrane protein
D Marky_0864 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Marky_0440 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Marky_1564 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Marky_1706 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Marky_1041 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Marky_1457 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Marky_0768 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Marky_1523 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Marky_0117 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Marky_1085 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Marky_0118 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Marky_0151 general secretion pathway protein I
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:mhd02020]
D Marky_0593 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Marky_1485 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Marky_0164 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Marky_0165 putative tricarboxylic transport membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D Marky_0166 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Marky_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D Marky_1258 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Marky_1178 Sulfate-transporting ATPase K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Marky_1179 putative sodium ABC transporter permease protein K09696 natB; sodium transport system permease protein
D Marky_1848 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1847 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1845 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1846 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D Marky_1421 two component transcriptional regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D Marky_1576 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR
D Marky_2122 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR
D Marky_1019 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_1636 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Marky_0296 Extracellular solute-binding protein, family 7 K11688 dctP; TRAP-type transport system periplasmic protein
D Marky_0315 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; TRAP-type transport system periplasmic protein
D Marky_0294 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; TRAP-type transport system small permease protein
D Marky_0314 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; TRAP-type transport system small permease protein
D Marky_0295 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; TRAP-type transport system large permease protein
D Marky_0313 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; TRAP-type transport system large permease protein
D Marky_0103 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_0920 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_0929 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_1020 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_2012 cytochrome c class I K08738 CYC; cytochrome c
D Marky_1045 outer membrane efflux protein K12340 tolC; outer membrane protein
D Marky_2210 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Marky_1582 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome [PATH:mhd04146]
D Marky_1306 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1388 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1389 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1509 Alanine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D Marky_1438 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Marky_0917 Hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D Marky_0350 Superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]
D Marky_1419 Manganese/iron superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Marky_0850 arginase K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:mhd02024]
D Marky_0393 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Marky_0254 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Marky_0253 response regulator receiver protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Marky_1421 two component transcriptional regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D Marky_0224 Polyamine-transporting ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Marky_1018 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1268 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1303 amino acid/amide ABC transporter substrate-binding protein, haat family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_2062 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_2149 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1017 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1269 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1305 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_2061 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_2150 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1016 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_1270 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1304 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_2060 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_2151 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_1015 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1307 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_2059 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_2152 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1014 Monosaccharide-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_1271 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_1302 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_2058 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_2153 Phosphonate-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_1306 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1388 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1389 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_0103 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_0920 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_0929 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_1020 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_1641 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Marky_0023 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_1013 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_1563 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_1629 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_2240 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_0022 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_1012 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_1562 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_1628 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_2239 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_0021 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_1011 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_1561 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_1627 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_2238 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_1560 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Marky_1559 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Marky_0237 Tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D Marky_1041 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Marky_1163 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_1800 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_1801 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_0864 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Marky_0440 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Marky_1564 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Marky_1706 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Marky_1457 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Marky_0768 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Marky_1523 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D Marky_1460 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Marky_0003 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:mhd04981]
D Marky_0536 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D Marky_0748 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D Marky_0482 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 04980 Cobalamin transport and metabolism [PATH:mhd04980]
D Marky_1767 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Marky_0320 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
D Marky_1006 Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells [PATH:mhd05100]
D Marky_0765 hypothetical protein K13730 inlA; internalin A
D Marky_1977 leucine-rich repeat-containing protein K13730 inlA; internalin A
D Marky_0262 hypothetical protein K13735 yeeJ; adhesin/invasin
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:mhd01501]
D Marky_1047 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Marky_1048 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Marky_1045 outer membrane efflux protein K12340 tolC; outer membrane protein
D Marky_0464 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Marky_1443 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:mhd01502]
D Marky_0398 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Marky_1769 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Marky_1444 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Marky_1446 glycosyl transferase family 4 K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Marky_1449 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:mhd01503]
D Marky_0470 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Marky_1213 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Marky_1485 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Marky_1047 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Marky_1048 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Marky_1045 outer membrane efflux protein K12340 tolC; outer membrane protein
D Marky_0344 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:mhd01000]
C 01001 Protein kinases [BR:mhd01001]
D Marky_0049 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Marky_0829 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Marky_1072 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Marky_1611 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Marky_1677 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:mhd01009]
D Marky_0392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Marky_1785 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Marky_0323 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Marky_0830 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:mhd01002]
D Marky_0032 Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Marky_2120 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Marky_0911 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Marky_0561 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Marky_1283 Glutamate synthase (ferredoxin) K00284 GLU; glutamate synthase (ferredoxin) [EC:1.4.7.1]
D Marky_0133 Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Marky_2050 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 IAL; isopenicillin-N N-acyltransferase like protein
D Marky_0255 Abortive infection protein K07052 K07052; CAAX protease family protein
D Marky_1437 Abortive infection protein K07052 K07052; CAAX protease family protein
D Marky_1661 Abortive infection protein K07052 K07052; CAAX protease family protein
D Marky_2106 Abortive infection protein K07052 K07052; CAAX protease family protein
D Marky_2194 peptidase M3A and M3B thimet/oligopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Marky_1926 peptidase M16 domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D Marky_0570 cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Marky_1953 Glutamate carboxypeptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D Marky_0030 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Marky_1704 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Marky_1208 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Marky_2139 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Marky_0327 Carboxypeptidase Taq K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D Marky_0401 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Marky_0430 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Marky_1192 peptidase M50 K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Marky_1485 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Marky_2033 Aqualysin 1 K20754 pstI; aqualysin 1 [EC:3.4.21.111]
D Marky_1163 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_1800 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_1801 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_1433 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Marky_0643 anti-sigma H sporulation factor, LonB K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Marky_1431 anti-sigma H sporulation factor, LonB K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Marky_1074 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Marky_0450 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Marky_1498 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Marky_1556 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Marky_1954 peptidase S45 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D Marky_0328 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Marky_2030 hypothetical protein K13282 cphB; cyanophycinase [EC:3.4.15.6]
D Marky_0094 Peptidase S54, rhomboid domain protein K07059 rho2; rhomboid family protease [EC:3.4.21.105]
D Marky_1327 ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Marky_2236 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D Marky_1591 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein
D Marky_1590 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:mhd01003]
D Marky_1243 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Marky_1448 cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_1083 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_0494 glycosyl transferase group 1 K20999 pslF; polysaccharide biosynthesis protein PslF
D Marky_0961 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Marky_1581 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Marky_0684 glycosyl transferase group 1 K22908 mggS; mannosylglucosylglycerate synthase [EC:2.4.1.-]
D Marky_1158 Sterol 3-beta-glucosyltransferase K05841 E2.4.1.173; sterol 3beta-glucosyltransferase [EC:2.4.1.173]
D Marky_0750 Alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
D Marky_0082 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:mhd01005]
D Marky_0344 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Marky_0341 UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Marky_0340 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Marky_1654 Phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Marky_1581 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:mhd01011]
D Marky_0052 UDP-N-acetylglucosamine1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Marky_1451 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Marky_1450 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Marky_1447 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Marky_0756 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Marky_0398 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Marky_1769 Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Marky_0382 Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Marky_1446 glycosyl transferase family 4 K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Marky_1449 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Marky_0770 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Marky_1320 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Marky_0464 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Marky_1443 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Marky_1448 cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_1083 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_0030 Peptidase M23 K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D Marky_0602 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Marky_1207 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Marky_0105 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Marky_0470 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Marky_1213 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:mhd01004]
D Marky_0844 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Marky_0845 3-oxoacyl-(acyl-carrier-protein) synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Marky_1880 3-oxoacyl-(acyl-carrier-protein) synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Marky_2144 Beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Marky_0841 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Marky_0729 dihydropteridine reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_0843 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_1670 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Marky_0343 (3R)-hydroxymyristoyl-(acyl-carrier-protein)dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Marky_0351 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Marky_1370 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1612 Acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1817 transcriptional regulator, IclR family K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1818 Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Marky_1306 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1388 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1389 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_2145 o-succinylbenzoate--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Marky_0414 Phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Marky_1001 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_1570 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_1761 Glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Marky_0426 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:mhd01006]
D Marky_0055 Polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Marky_0809 Geranyltranstransferase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Marky_1195 Undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Marky_1396 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Marky_1340 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Marky_1959 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:mhd01007]
D Marky_0769 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Marky_1626 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Marky_0459 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Marky_1052 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Marky_1155 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Marky_0762 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Marky_1180 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Marky_1232 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Marky_0868 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Marky_1980 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Marky_1108 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Marky_1221 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Marky_1226 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Marky_1319 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Marky_1220 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Marky_1379 Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Marky_1380 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Marky_1250 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Marky_2124 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Marky_1504 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Marky_0600 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Marky_2036 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Marky_1782 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Marky_1783 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Marky_0033 Aspartate transaminase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D Marky_0647 Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Marky_0621 pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D Marky_1881 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Marky_0665 Acetylornithine/succinyldiaminopimelate aminotransferase K05830 lysJ; [amino-group carrier protein]-gamma-(L-lysyl/L-ornithyl)-L-glutamate aminotransferase [EC:2.6.1.118 2.6.1.124]
D Marky_1080 Acetylornithine/succinyldiaminopimelate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D Marky_1162 Acetylornithine/succinyldiaminopimelate aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82]
D Marky_1879 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Marky_1347 Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Marky_2055 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Marky_1509 Alanine--glyoxylate transaminase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:mhd03000]
D Marky_0941 transcriptional regulator, DeoR family K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D Marky_0680 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Marky_2222 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Marky_2063 transcriptional regulator, GntR family with UTRA sensor domain K03710 K03710; GntR family transcriptional regulator
D Marky_0039 regulatory protein TetR K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D Marky_1254 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Marky_2143 TPR repeat-containing protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D Marky_1758 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Marky_0549 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Marky_2013 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D Marky_1257 regulatory protein MerR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D Marky_0287 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Marky_0789 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Marky_0578 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Marky_1395 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Marky_0103 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_0920 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_0929 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_1020 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Marky_1837 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Marky_1392 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Marky_0404 regulatory protein ArsR K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Marky_0544 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Marky_1884 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Marky_0807 Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor
D Marky_0083 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Marky_1028 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Marky_2005 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Marky_2202 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Marky_2248 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Marky_0652 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Marky_2032 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Marky_1621 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Marky_0308 Heat-inducible transcription repressor hrcA K03705 hrcA; heat-inducible transcriptional repressor
D Marky_1505 transcriptional regulator, PaaX family K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D Marky_1402 Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Marky_0070 Transcriptional repressor nrdR K07738 nrdR; transcriptional repressor NrdR
D Marky_1440 Protein mraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:mhd03021]
D Marky_1698 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Marky_0446 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Marky_0447 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Marky_1623 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Marky_1460 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Marky_1071 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Marky_0860 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Marky_0822 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Marky_0441 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Marky_1107 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA
D Marky_1230 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:mhd03019]
D Marky_1577 double-stranded RNA binding domain protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Marky_0797 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Marky_0338 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Marky_1161 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Marky_0129 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Marky_0171 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Marky_0003 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Marky_0798 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Marky_1230 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Marky_1785 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Marky_0431 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Marky_0717 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Marky_0080 UPF0042 nucleotide-binding protein yhbJ K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:mhd03011]
D Marky_2110 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Marky_1199 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Marky_1720 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Marky_1699 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Marky_1709 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Marky_0088 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Marky_1730 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Marky_1712 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Marky_0771 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Marky_1727 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Marky_1700 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Marky_1731 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Marky_1701 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Marky_1713 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Marky_0799 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Marky_1522 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Marky_1717 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Marky_0086 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Marky_1722 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Marky_0461 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Marky_0462 hypothetical protein K19033 PSRP4; 30S ribosomal protein S31/Thx
D Marky_0443 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Marky_1723 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Marky_1726 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Marky_1725 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Marky_1714 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Marky_1711 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Marky_0085 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Marky_0444 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Marky_0442 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Marky_0445 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Marky_0772 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Marky_1716 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Marky_1707 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Marky_1719 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Marky_1697 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Marky_1710 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Marky_1518 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Marky_0098 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Marky_0263 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Marky_1721 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Marky_1724 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Marky_1715 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Marky_0264 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Marky_0031 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Marky_1718 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Marky_1708 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Marky_1399 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Marky_0846 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Marky_0439 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Marky_0097 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Marky_1702 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Marky_0396 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D Marky_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0037 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Marky_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Marky_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Marky_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:mhd03009]
D Marky_1577 double-stranded RNA binding domain protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Marky_0557 GTP-binding protein Era-like-protein K03595 era; GTPase
D Marky_0265 GTPase obg K03979 obgE; GTPase [EC:3.6.5.-]
D Marky_0860 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Marky_0822 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Marky_0441 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Marky_2035 pseudouridine synthase Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Marky_0651 Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Marky_1286 NusB/RsmB/TIM44 K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Marky_1459 methyltransferase small K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D Marky_1343 Conserved hypothetical protein CHP00095 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Marky_2250 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Marky_1441 Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Marky_1786 Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Marky_0502 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Marky_1795 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Marky_0711 Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Marky_0503 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Marky_1607 methyltransferase small K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Marky_2073 Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Marky_1475 (Uracil-5)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Marky_2088 pseudouridine synthase Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Marky_0499 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Marky_1520 Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D Marky_0389 Ribosomal protein S12 methylthiotransferase rimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Marky_0791 Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Marky_0601 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Marky_0129 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Marky_0484 GTP-binding protein engA K03977 engA; GTPase
D Marky_0898 GTP-binding proten HflX K03665 hflX; GTPase
D Marky_0965 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Marky_2003 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Marky_1138 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Marky_0859 Ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D Marky_0269 iojap-like protein K09710 ybeB; ribosome-associated protein
D Marky_1128 metalloprotease ybeY K07042 ybeY; probable rRNA maturation factor
D Marky_1554 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Marky_0381 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Marky_0847 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:mhd03016]
D Marky_1185 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Marky_1238 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Marky_0194 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Marky_0193 protein of unknown function DUF101 K24956 ZBTB8OS; protein archease
D Marky_0769 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Marky_2124 Prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Marky_1232 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Marky_1980 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Marky_1180 Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Marky_1626 Glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Marky_0762 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Marky_1108 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Marky_1221 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Marky_0600 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Marky_2036 Threonyl/alanyl tRNA synthetase SAD K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Marky_1226 Asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Marky_1504 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Marky_1250 Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Marky_1155 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Marky_0868 Valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Marky_1220 Histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Marky_1782 Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Marky_1783 Phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Marky_0459 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Marky_1052 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Marky_1166 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Marky_1528 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Marky_0780 MiaB-like tRNA modifying enzyme K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase [EC:2.8.4.5]
D Marky_1337 tRNA (adenine-N(1)-)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D Marky_0020 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Marky_1738 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Marky_2085 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Marky_1150 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D Marky_1391 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Marky_0965 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Marky_1396 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Marky_1348 tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Marky_2251 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Marky_1043 Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Marky_R0041 RNA component of RNaseP K01978 rnpB; RNase P catalytic RNA component
D Marky_0383 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Marky_1372 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D Marky_0336 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Marky_1379 Glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Marky_1380 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Marky_1319 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Marky_0554 TIM-barrel protein, yjbN family K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D Marky_1428 (Dimethylallyl)adenosine tRNA methylthiotransferase miaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Marky_0583 RNA methyltransferase, TrmH family, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D Marky_1328 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Marky_1519 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Marky_0140 tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D Marky_0662 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Marky_0719 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Marky_0573 tRNA-specific 2-thiouridylase mnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Marky_0475 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Marky_0334 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D Marky_0888 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Marky_0656 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Marky_0658 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Marky_0657 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Marky_0781 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Marky_0900 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Marky_1778 Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Marky_1317 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Marky_1151 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Marky_1063 universal protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Marky_1458 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Marky_0302 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Marky_1161 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Marky_0798 Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:mhd03012]
D Marky_0862 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Marky_0096 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Marky_1198 Elongation factor Ts K02357 tsf; elongation factor Ts
D Marky_0438 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Marky_1728 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Marky_1066 small GTP-binding protein K02355 fusA; elongation factor G
D Marky_1729 translation elongation factor G K02355 fusA; elongation factor G
D Marky_0545 Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Marky_1196 Ribosome-recycling factor K02838 frr; ribosome recycling factor
D Marky_1039 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Marky_0397 Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Marky_1703 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Marky_0818 Elongation factor P K02356 efp; elongation factor P
D Marky_0036 hypothetical protein K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:mhd03110]
D Marky_1987 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Marky_1378 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Marky_1432 ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Marky_1326 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Marky_0431 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Marky_0717 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Marky_1510 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D Marky_0433 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Marky_1341 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D Marky_0432 Protein grpE K03687 GRPE; molecular chaperone GrpE
D Marky_0026 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Marky_0156 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Marky_0157 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Marky_1397 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Marky_0718 10 kDa chaperonin K04078 groES; chaperonin GroES
D Marky_1485 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Marky_0401 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Marky_0430 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Marky_1163 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_1800 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_1801 peptidase S8 and S53 subtilisin kexin sedolisin K14645 K14645; serine protease [EC:3.4.21.-]
D Marky_0636 Peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D Marky_0899 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Marky_0413 thioredoxin K03671 TXN; thioredoxin
D Marky_1973 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:mhd04131]
D Marky_2235 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Marky_1211 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Marky_1330 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Marky_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:mhd04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:mhd03032]
D Marky_0915 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Marky_0429 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Marky_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D Marky_0084 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Marky_0889 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Marky_0087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Marky_0569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Marky_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Marky_1589 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Marky_0202 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Marky_0969 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_1812 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_2165 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Marky_0298 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Marky_1136 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Marky_0991 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Marky_1025 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Marky_0248 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Marky_0110 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:mhd03036]
D Marky_1577 double-stranded RNA binding domain protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Marky_0429 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Marky_0433 chaperone DnaJ domain protein K05516 cbpA; curved DNA-binding protein
D Marky_0434 transcriptional regulator, MerR family K18997 cbpM; chaperone modulatory protein CbpM
D Marky_0001 Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D Marky_1254 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Marky_1215 SMC domain protein K03529 smc; chromosome segregation protein
D Marky_1053 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Marky_0964 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Marky_1453 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Marky_1555 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Marky_1443 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Marky_1363 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Marky_1452 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Marky_1448 cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_1552 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Marky_1454 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Marky_0521 AFG1-family ATPase K06916 zapE; cell division protein ZapE
D Marky_0470 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Marky_1213 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Marky_1047 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Marky_0463 septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D Marky_1081 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Marky_1082 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Marky_0895 DivIVA domain protein K04074 divIVA; cell division initiation protein
D Marky_0339 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Marky_0466 Rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Marky_0465 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Marky_1083 rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_0258 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Marky_2249 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Marky_2248 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Marky_2251 tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Marky_2250 Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Marky_1328 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Marky_1218 integrase family protein K03733 xerC; integrase/recombinase XerC
D Marky_0869 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
C 03400 DNA repair and recombination proteins [BR:mhd03400]
D Marky_0121 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Marky_0490 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Marky_0210 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Marky_2125 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Marky_0318 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Marky_0546 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Marky_2007 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Marky_0908 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Marky_1649 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Marky_1876 HhH-GPD family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D Marky_0858 Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Marky_1206 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Marky_0425 Endonuclease V K05982 nfi; deoxyribonuclease V [EC:3.1.21.7]
D Marky_0866 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Marky_0991 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Marky_1136 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Marky_1886 UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D Marky_0136 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D Marky_0763 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D Marky_1312 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Marky_0446 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Marky_0447 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Marky_1698 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Marky_1623 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Marky_1239 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Marky_1489 DNA mismatch repair protein mutS K03555 mutS; DNA mismatch repair protein MutS
D Marky_2074 MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2
D Marky_1488 DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D Marky_0569 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Marky_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Marky_1589 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Marky_0202 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Marky_0969 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_1812 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Marky_2165 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Marky_0087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Marky_0337 Protein recA K03553 recA; recombination protein RecA
D Marky_1354 Holliday junction ATP-dependent DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D Marky_0492 Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Marky_1092 Crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Marky_2233 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Marky_1321 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Marky_1322 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D Marky_1377 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Marky_2053 DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D Marky_0309 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Marky_0873 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Marky_1118 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Marky_1005 Recombination protein O RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Marky_0836 Recombination protein recR K06187 recR; recombination protein RecR
D Marky_1551 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Marky_1672 UvrD/REP helicase K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Marky_1673 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Marky_0279 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Marky_0983 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Marky_2070 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Marky_1025 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Marky_0248 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Marky_0110 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Marky_0429 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Marky_0171 ATP-dependent DNA helicase, RecQ family K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Marky_1153 Regulatory protein recX K03565 recX; regulatory protein
D Marky_1863 PHP domain protein K02347 polX; DNA polymerase (family X)
D Marky_0853 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Marky_1625 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Marky_0852 Ribonucleoside-diphosphate reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Marky_0676 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:mhd03029]
D Marky_0862 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Marky_0096 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Marky_1198 Elongation factor Ts K02357 tsf; elongation factor Ts
D Marky_0438 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Marky_1728 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Marky_1066 small GTP-binding protein K02355 fusA; elongation factor G
D Marky_1729 translation elongation factor G K02355 fusA; elongation factor G
D Marky_1427 beta-lactamase domain protein K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-]
D Marky_0557 GTP-binding protein Era-like-protein K03595 era; GTPase
D Marky_0459 Tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Marky_1980 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Marky_1221 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Marky_0762 Arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Marky_0968 Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Marky_2211 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Marky_1249 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Marky_0087 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Marky_0892 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Marky_0431 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Marky_0432 Protein grpE K03687 GRPE; molecular chaperone GrpE
D Marky_0717 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Marky_0718 10 kDa chaperonin K04078 groES; chaperonin GroES
D Marky_1510 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D Marky_1391 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Marky_0869 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Marky_1959 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D Marky_1041 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Marky_0990 electron transport protein SCO1/SenC K07152 SCO1; protein SCO1
D Marky_2027 band 7 protein K17081 PHB2; prohibitin 2
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:mhd02000]
D Marky_1573 Xenobiotic-transporting ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Marky_1572 Xenobiotic-transporting ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Marky_0346 Xenobiotic-transporting ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Marky_1088 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Marky_1087 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Marky_1086 Polyamine-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Marky_0065 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Marky_1733 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Marky_2225 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Marky_1734 ABC-type transporter, integral membrane subunit K02011 afuB; iron(III) transport system permease protein
D Marky_2226 ABC-type transporter, integral membrane subunit K02011 afuB; iron(III) transport system permease protein
D Marky_1735 Fe(3+)-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Marky_2227 spermidine/putrescine ABC transporter ATPase subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Marky_0222 ABC transporter, periplasmic binding protein, thiB subfamily K02064 thiB; thiamine transport system substrate-binding protein
D Marky_0223 ABC-type transporter, integral membrane subunit K02063 thiP; thiamine transport system permease protein
D Marky_0224 Polyamine-transporting ATPase K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D Marky_0056 ABC-type glycine betaine transport, periplasmic subunit K02002 proX; glycine betaine/proline transport system substrate-binding protein
D Marky_0057 ABC-type transporter, integral membrane subunit K02001 proW; glycine betaine/proline transport system permease protein
D Marky_0058 glycine betaine/L-proline ABC transporter, ATPase subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D Marky_1517 ABC-type glycine betaine transport, periplasmic subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D Marky_1514 ABC-type transporter, integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D Marky_1516 ABC-type transporter, integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D Marky_1515 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Marky_1749 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Marky_1748 Taurine-transporting ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Marky_1332 Glycerol-3-phosphate-transporting ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Marky_1820 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Marky_2154 extracellular solute-binding protein family 1 K17315 gtsA; glucose/mannose transport system substrate-binding protein
D Marky_2155 ABC-type transporter, integral membrane subunit K17316 gtsB; glucose/mannose transport system permease protein
D Marky_2156 ABC-type transporter, integral membrane subunit K17317 gtsC; glucose/mannose transport system permease protein
D Marky_0940 extracellular solute-binding protein family 1 K17237 inoE; inositol-phosphate transport system substrate-binding protein
D Marky_0939 ABC-type transporter, integral membrane subunit K17238 inoF; inositol-phosphate transport system permease protein
D Marky_0938 ABC-type transporter, integral membrane subunit K17239 inoG; inositol-phosphate transport system permease protein
D Marky_0937 Glycerol-3-phosphate-transporting ATPase K17240 inoK; inositol-phosphate transport system ATP-binding protein
D Marky_1991 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Marky_2175 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Marky_1990 ABC-type transporter, integral membrane subunit K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Marky_1989 ABC-type transporter, integral membrane subunit K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Marky_0992 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Marky_0206 ABC-type transporter, integral membrane subunit K23535 nupB; general nucleoside transport system permease protein
D Marky_0205 ABC-type transporter, integral membrane subunit K23536 nupC; general nucleoside transport system permease protein
D Marky_0993 Monosaccharide-transporting ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D Marky_0681 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Marky_1051 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Marky_2221 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Marky_0682 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D Marky_1050 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D Marky_2173 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D Marky_2220 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D Marky_0683 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Marky_1049 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Marky_2174 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Marky_2219 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Marky_1924 periplasmic binding protein/LacI transcriptional regulator K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D Marky_1923 ABC-type transporter, integral membrane subunit K02057 ABC.SS.P; simple sugar transport system permease protein
D Marky_1922 Monosaccharide-transporting ATPase K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Marky_0593 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Marky_0594 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Marky_0595 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Marky_0596 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Marky_0060 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D Marky_0062 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Marky_0061 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Marky_1472 ABC-type transporter, periplasmic subunit family 3 K09969 aapJ; general L-amino acid transport system substrate-binding protein
D Marky_1471 polar amino acid ABC transporter, inner membrane subunit K09970 aapQ; general L-amino acid transport system permease protein
D Marky_1470 polar amino acid ABC transporter, inner membrane subunit K09971 aapM; general L-amino acid transport system permease protein
D Marky_1469 Phosphonate-transporting ATPase K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Marky_1018 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1268 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1303 amino acid/amide ABC transporter substrate-binding protein, haat family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_2062 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_2149 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Marky_1017 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1269 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1305 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_2061 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_2150 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Marky_1016 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_1270 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1304 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_2060 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_2151 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Marky_1015 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1307 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_2059 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_2152 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Marky_1014 Monosaccharide-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_1271 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_1302 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_2058 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_2153 Phosphonate-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Marky_1474 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Marky_1473 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Marky_0023 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_1013 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_1563 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_1629 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_2240 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Marky_0022 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_1012 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_1562 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_1628 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_2239 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Marky_0021 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_1011 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_1561 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_1627 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_2238 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Marky_1560 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Marky_1559 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Marky_1187 ABC-type transporter, periplasmic subunit K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Marky_1766 ABC-type transporter, periplasmic subunit K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Marky_2000 ABC-type transporter, periplasmic subunit K25034 btuF; cobalamin transport system substrate-binding protein
D Marky_1999 ABC-type transporter, integral membrane subunit K25027 btuC; cobalamin transport system permease protein
D Marky_1998 Iron-chelate-transporting ATPase K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Marky_0790 ABC-type metal ion transporter, periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein
D Marky_1393 ABC-type transporter, integral membrane subunit K09816 znuB; zinc transport system permease protein
D Marky_1394 Phosphonate-transporting ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Marky_1883 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Marky_0406 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Marky_0405 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Marky_0473 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Marky_1463 Sulfate-transporting ATPase K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Marky_1179 putative sodium ABC transporter permease protein K09696 natB; sodium transport system permease protein
D Marky_1178 Sulfate-transporting ATPase K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Marky_2078 protein of unknown function DUF214 K09808 lolC_E_F; lipoprotein-releasing system permease protein
D Marky_0921 Phosphonate-transporting ATPase K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Marky_0454 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Marky_0453 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Marky_0452 Heme-transporting ATPase K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Marky_1552 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Marky_1555 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Marky_1762 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein
D Marky_1763 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein
D Marky_1764 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D Marky_0013 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Marky_0855 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Marky_0932 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Marky_2162 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Marky_0012 heme exporter protein CcmA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Marky_0856 Sulfate-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Marky_0933 Phosphonate-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Marky_2101 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Marky_2103 Fe(3+)-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Marky_2163 heme exporter protein CcmA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Marky_0599 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Marky_1033 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Marky_0598 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Marky_1032 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Marky_1112 Polyamine-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Marky_1895 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Marky_1834 anion transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D Marky_1844 major facilitator superfamily MFS_1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D Marky_0007 major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D Marky_2232 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D Marky_1650 MIP family channel protein K09873 TIP; aquaporin TIP
D Marky_0310 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Marky_1771 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Marky_1772 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Marky_1934 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Marky_0415 MscS Mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D Marky_1524 magnesium transporter K06213 mgtE; magnesium transporter
D Marky_1481 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Marky_1480 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Marky_1776 CrcB-like protein K06199 crcB; fluoride exporter
D Marky_1126 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Marky_1045 outer membrane efflux protein K12340 tolC; outer membrane protein
D Marky_0892 surface antigen (D15) K07277 SAM50; outer membrane protein insertion porin family
D Marky_0542 putative metal cation transporter K07238 TC.ZIP; zinc transporter, ZIP family
D Marky_1048 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Marky_1635 protein of unknown function DUF6 transmembrane K03298 TC.DME; drug/metabolite transporter, DME family
D Marky_0170 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Marky_1815 putative sodium symporter protein K14393 actP; cation/acetate symporter
D Marky_0271 sodium/hydrogen exchanger K03316 nhaP; Na+:H+ antiporter
D Marky_2137 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Marky_0158 TrkA-C domain protein K07228 khtT; K+:H+ antiporter subunit KhtT
D Marky_0159 sodium/hydrogen exchanger K26732 khtU; K+:H+ antiporter subunit KhtU
D Marky_0391 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D Marky_0390 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Marky_1780 uracil-xanthine permease K02824 uraA; uracil permease
D Marky_1079 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Marky_1148 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Marky_1172 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Marky_2237 Chromate transporter K07240 chrA; chromate transporter
D Marky_0296 Extracellular solute-binding protein, family 7 K11688 dctP; TRAP-type transport system periplasmic protein
D Marky_0315 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; TRAP-type transport system periplasmic protein
D Marky_0294 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; TRAP-type transport system small permease protein
D Marky_0314 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; TRAP-type transport system small permease protein
D Marky_0295 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; TRAP-type transport system large permease protein
D Marky_0313 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; TRAP-type transport system large permease protein
D Marky_1344 Na+/Picotransporter K03324 yjbB; phosphate:Na+ symporter
D Marky_1320 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Marky_0796 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Marky_0164 protein of unknown function DUF112 transmembrane K07793 tctA; putative tricarboxylic transport membrane protein
D Marky_0165 putative tricarboxylic transport membrane protein K07794 tctB; putative tricarboxylic transport membrane protein
D Marky_0166 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D Marky_1448 cell cycle protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D Marky_1647 Propionyl-CoA carboxylase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Marky_0451 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Marky_0997 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Marky_1035 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Marky_2018 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Marky_1848 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1847 nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1845 respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D Marky_1047 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Marky_1974 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:mhd02044]
D Marky_1045 outer membrane efflux protein K12340 tolC; outer membrane protein
D Marky_2120 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Marky_1636 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Marky_0148 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Marky_2113 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Marky_0147 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D Marky_0966 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D Marky_1534 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Marky_1535 fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Marky_1536 General secretion pathway protein M K02664 pilO; type IV pilus assembly protein PilO
D Marky_0236 twitching motility protein K02669 pilT; twitching motility protein PilT
D Marky_2112 twitching motility protein K02669 pilT; twitching motility protein PilT
D Marky_2246 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D Marky_2247 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Marky_1457 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Marky_0864 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Marky_0440 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Marky_1564 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Marky_1706 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Marky_1523 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Marky_0768 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Marky_1041 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Marky_0117 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Marky_1085 Sec-independent protein translocase protein tatA/E-like protein K03116 tatA; sec-independent protein translocase protein TatA
D Marky_0118 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:mhd02042]
D Marky_1126 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Marky_2094 Hly-III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:mhd02022]
D Marky_1677 integral membrane sensor signal transduction histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D Marky_1421 two component transcriptional regulator, LuxR family K20264 fusR; two-component system, NarL family, response regulator FusR
D Marky_1576 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR
D Marky_2122 two component transcriptional regulator, LuxR family K11618 liaR; two-component system, NarL family, response regulator LiaR
C 02035 Bacterial motility proteins [BR:mhd02035]
D Marky_0236 twitching motility protein K02669 pilT; twitching motility protein PilT
D Marky_2112 twitching motility protein K02669 pilT; twitching motility protein PilT
D Marky_1636 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Marky_0148 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Marky_2113 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Marky_0147 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D Marky_0966 Type II secretion system F domain protein K02653 pilC; type IV pilus assembly protein PilC
D Marky_2120 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Marky_1536 General secretion pathway protein M K02664 pilO; type IV pilus assembly protein PilO
D Marky_1535 fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Marky_1534 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:mhd04812]
D Marky_1184 UPF0103/Mediator of ErbB2-driven cell motility-containing protein K06990 MEMO1; MEMO1 family protein
D Marky_0339 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Marky_1454 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Marky_1453 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Marky_0463 septum site-determining protein minC K03610 minC; septum site-determining protein MinC
D Marky_1081 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Marky_1082 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Marky_0258 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Marky_2249 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Marky_2248 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:mhd04147]
D Marky_0003 Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Marky_1211 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Marky_1330 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Marky_1210 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Marky_0004 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Marky_0717 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Marky_0431 Chaperone protein dnaK K04043 dnaK; molecular chaperone DnaK
D Marky_1955 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Marky_0232 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Marky_0438 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Marky_1728 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Marky_1528 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Marky_0239 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Marky_1306 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1388 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1389 Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D Marky_1055 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Marky_0392 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Marky_1705 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Marky_0777 Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Marky_0776 Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Marky_1927 Aromatic-L-amino-acid decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D Marky_2158 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Marky_0660 Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Marky_1019 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Marky_0834 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Marky_0775 transcriptional coactivator/pterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D Marky_1168 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Marky_0905 Bifunctional purine biosynthesis protein purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Marky_0707 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Marky_1646 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Marky_0810 Glutamate dehydrogenase (NAD(P)(+)) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Marky_0811 Glutamate dehydrogenase (NAD(P)(+)) K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D Marky_2027 band 7 protein K17081 PHB2; prohibitin 2
D Marky_1209 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:mhd02048]
D Marky_0279 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Marky_0983 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Marky_2070 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Marky_0189 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Marky_0280 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Marky_0984 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Marky_2071 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Marky_0274 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Marky_0976 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Marky_2068 metal dependent phosphohydrolase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Marky_0278 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Marky_2069 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Marky_0176 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Marky_2064 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Marky_2065 CRISPR-associated protein Csh1 domain protein K19114 csh1; CRISPR-associated protein Csh1
D Marky_2066 CRISPR-associated protein, Csh2 family K19115 csh2; CRISPR-associated protein Csh2
D Marky_0276 CRISPR-associated protein, Csd1 family K19117 csd1; CRISPR-associated protein Csd1
D Marky_0277 CRISPR-associated protein, Csd2 family K19118 csd2; CRISPR-associated protein Csd2
D Marky_0275 CRISPR-associated protein Cas5 family K19119 cas5d; CRISPR-associated protein Cas5d
D Marky_0978 CRISPR-associated protein, Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D Marky_0979 CRISPR-associated protein, Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D Marky_0980 CRISPR-associated protein, Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D Marky_0981 CRISPR-associated protein Cas5 family K19125 casD; CRISPR system Cascade subunit CasD
D Marky_0982 CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
D Marky_0181 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Marky_0180 CRISPR-associated protein TM1810 domain protein K19138 csm2; CRISPR-associated protein Csm2
D Marky_0179 CRISPR-associated RAMP protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Marky_0178 CRISPR-associated RAMP protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Marky_0177 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Marky_1909 CRISPR-associated protein TM1795 family protein K07061 cmr1; CRISPR-associated protein Cmr1
D Marky_1911 CRISPR-associated protein, Crm2 family K19076 cmr2; CRISPR-associated protein Cmr2
D Marky_1910 CRISPR-associated protein, Cmr3 K09127 cmr3; CRISPR-associated protein Cmr3
D Marky_1908 CRISPR-associated RAMP protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D Marky_1907 CRISPR-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D Marky_1906 CRISPR-associated RAMP protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D Marky_1117 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Marky_0034 Eco57I restriction endonuclease K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Marky_1297 death-on-curing family protein K07341 doc; death on curing protein
D Marky_1454 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Marky_0339 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Marky_0769 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Marky_1391 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:mhd04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:mhd04090]
C 01504 Antimicrobial resistance genes [BR:mhd01504]
D Marky_1047 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Marky_1048 acriflavin resistance protein K18138 acrB; multidrug efflux pump
D Marky_0549 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D Marky_1045 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:mhd03100]
D Marky_R0010 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Marky_R0026 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Marky_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Marky_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Marky_R0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Marky_R0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Marky_R0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Marky_R0055 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Marky_R0017 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Marky_R0045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Marky_R0042 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Marky_R0002 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Marky_R0025 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Marky_R0003 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Marky_R0004 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Marky_R0008 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Marky_R0021 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Marky_R0034 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Marky_R0056 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Marky_R0040 tRNA-His K14226 tRNA-His; tRNA His
D Marky_R0049 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Marky_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0029 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0039 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0050 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0054 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Marky_R0011 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Marky_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Marky_R0024 tRNA-Met K14230 tRNA-Met; tRNA Met
D Marky_R0027 tRNA-Met K14230 tRNA-Met; tRNA Met
D Marky_R0051 tRNA-Met K14230 tRNA-Met; tRNA Met
D Marky_R0052 tRNA-Met K14230 tRNA-Met; tRNA Met
D Marky_R0018 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Marky_R0015 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Marky_R0035 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Marky_R0036 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Marky_R0013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Marky_R0014 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Marky_R0030 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Marky_R0031 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Marky_R0019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Marky_R0022 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Marky_R0023 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Marky_R0047 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Marky_R0020 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Marky_R0005 tRNA-Val K14237 tRNA-Val; tRNA Val
D Marky_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val
D Marky_R0044 tRNA-Val K14237 tRNA-Val; tRNA Val
D Marky_R0053 tRNA-Val K14237 tRNA-Val; tRNA Val
D Marky_R0012 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0037 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Marky_R0006 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Marky_R0058 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Marky_R0007 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Marky_R0057 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Marky_R0041 RNA component of RNaseP K01978 rnpB; RNase P catalytic RNA component
D Marky_R0060 RNA component of signal recognition particle K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Marky_0130 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Marky_1417 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D Marky_1216 Peptide methionine sulfoxide reductase msrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D Marky_1176 Peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Marky_1691 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24129 K24129; glutaredoxin-dependent peroxiredoxin [EC:1.11.1.25]
D Marky_1864 Ferredoxin--NADP reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Marky_1789 glutaredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D Marky_1104 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Marky_0273 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Marky_0904 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Marky_0480 GCN5-related N-acetyltransferase K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D Marky_0495 glycosidase related protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D Marky_0685 Sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D Marky_0646 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Marky_0115 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Marky_1499 ATP-cone domain protein K05715 2PGK; 2-phosphoglycerate kinase [EC:2.7.2.16]
D Marky_2082 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Marky_1861 Conserved hypothetical protein CHP00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Marky_0215 alpha/beta hydrolase fold protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Marky_0416 Carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D Marky_1275 hypothetical protein K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D Marky_1139 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Marky_1529 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Marky_2114 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Marky_1316 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Marky_1751 UPF0286 protein K07503 nucS; endonuclease [EC:3.1.-.-]
D Marky_1188 hypothetical protein K25649 mgh; mannosylglycerate hydrolase [EC:3.2.1.170]
D Marky_0131 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Marky_1859 Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Marky_1760 LmbE family protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D Marky_0322 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Marky_0728 NUDIX hydrolase K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-]
D Marky_0625 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Marky_1065 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Marky_1774 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Marky_0091 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3]
D Marky_0185 hypothetical protein K24914 lanKC; class III lanthionine synthetase [EC:3.13.2.4]
D Marky_0486 YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Marky_2132 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D Marky_0403 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D Marky_0241 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
D Marky_0479 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
D Marky_0478 Histone deacetylase K04768 acuC; acetoin utilization protein AcuC
D Marky_1929 protein of unknown function DUF224 cysteine-rich region domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D Marky_1930 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D Marky_1932 Lactate utilization protein B/C K00782 lldG; L-lactate dehydrogenase complex protein LldG
D Marky_0104 UPF0747 protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D Marky_1900 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D Marky_1810 NapD family protein K02570 napD; periplasmic nitrate reductase NapD
D Marky_1809 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K02572 napF; ferredoxin-type protein NapF
D Marky_2179 Rieske (2Fe-2S) iron-sulfur domain protein K15878 K15878; rieske iron-sulfur protein
D Marky_2180 Cytochrome b/b6 domain protein K15879 narC; cytochrome b-561
D Marky_1645 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D Marky_1382 protein of unknown function DUF1458 K09165 K09165; dodecin
C 99983 Lipid metabolism
D Marky_1167 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Marky_1240 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Marky_0894 protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Marky_0137 E3 binding domain protein K21687 rpfA; resuscitation-promoting factor RpfA
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D Marky_0713 Glyoxalase/bleomycin resistance protein/dioxygenase K15975 K15975; glyoxalase family protein
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Marky_1668 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Marky_1983 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Marky_2200 glutaredoxin K16509 spxA; regulatory protein spx
C 99974 Translation
D Marky_0068 RNA binding S1 domain protein K07571 K07571; S1 RNA binding domain protein
D Marky_0589 beta-lactamase domain protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D Marky_1434 Trigger factor K03545 tig; trigger factor
D Marky_1212 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Marky_2167 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Marky_1671 OsmC family protein K07397 yhfA; putative redox protein
D Marky_1132 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Marky_0197 Resolvase domain protein K07450 K07450; putative resolvase
D Marky_1119 SMC domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D Marky_0270 UPF0102 protein yraN K07460 yraN; putative endonuclease
D Marky_0556 DNA protecting protein DprA K04096 smf; DNA processing protein
D Marky_1506 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Marky_0075 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Marky_0306 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Marky_1915 transposase IS605 OrfB K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D Marky_2045 phage shock protein A, PspA K03969 pspA; phage shock protein A
D Marky_0835 UPF0133 protein ybaB K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Marky_1592 sodium:neurotransmitter symporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D Marky_0217 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D Marky_1040 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein
D Marky_1181 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D Marky_1284 Stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
C 99993 Cell motility
D Marky_0784 gliding motility protein K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D Marky_1129 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Marky_1183 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
D Marky_1813 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D Marky_1362 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Marky_0456 Cytochrome c-type biogenesis protein ccmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D Marky_1972 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D Marky_0592 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Marky_1021 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Marky_1103 Protein of unknown function DUF1998 K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D Marky_1073 Patatin K07001 K07001; NTE family protein
D Marky_1467 Patatin K07001 K07001; NTE family protein
D Marky_0195 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D Marky_0563 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D Marky_1630 iron-sulfur cluster assembly accessory protein K15724 erpA; iron-sulfur cluster insertion protein
D Marky_1896 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Marky_1897 FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D Marky_1889 ribonuclease BN K07058 K07058; membrane protein
D Marky_0930 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D Marky_1490 Fe-S metabolism associated SufE K02426 sufE; cysteine desulfuration protein SufE
D Marky_0169 SNARE associated Golgi protein-like protein K03975 dedA; membrane-associated protein
D Marky_0009 membrane protein of unknown function K08972 K08972; putative membrane protein
D Marky_0802 protein of unknown function DUF420 K08976 K08976; putative membrane protein
D Marky_0242 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein
D Marky_2134 Protein of unknown function DUF2078, membrane K08982 K08982; putative membrane protein
C 99997 Function unknown
D Marky_2086 Ankyrin K06867 K06867; uncharacterized protein
D Marky_0883 protein of unknown function DUF255 K06888 K06888; uncharacterized protein
D Marky_0641 phospholipase/Carboxylesterase K06889 K06889; uncharacterized protein
D Marky_1956 alpha/beta hydrolase fold protein K06889 K06889; uncharacterized protein
D Marky_0211 CoA-binding domain protein K06929 K06929; uncharacterized protein
D Marky_1521 hypothetical protein K06960 K06960; uncharacterized protein
D Marky_1285 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein
D Marky_1917 peptidase C39 bacteriocin processing K06992 K06992; uncharacterized protein
D Marky_2182 peptidase C39 bacteriocin processing K06992 K06992; uncharacterized protein
D Marky_2095 efflux transporter, hydrophobe/amphiphile efflux-3 (HAE3) family K07003 K07003; uncharacterized protein
D Marky_0527 protein of unknown function DUF132 K07063 K07063; uncharacterized protein
D Marky_0609 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Marky_1587 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Marky_0362 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Marky_1084 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Marky_1867 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Marky_1456 metallophosphoesterase K07098 K07098; uncharacterized protein
D Marky_1152 metallophosphoesterase K07099 K07099; uncharacterized protein
D Marky_1928 membrane protein AbrB duplication K07120 K07120; uncharacterized protein
D Marky_0839 Roadblock/LC7 family protein K07131 K07131; uncharacterized protein
D Marky_1248 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D Marky_2127 protein of unknown function DUF164 K07164 K07164; uncharacterized protein
D Marky_1042 UPF0161 protein yidD K08998 K08998; uncharacterized protein
D Marky_1527 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Marky_0753 protein of unknown function DUF192 K09005 K09005; uncharacterized protein
D Marky_1175 protein of unknown function DUF355 K09129 K09129; uncharacterized protein
D Marky_1775 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Marky_0686 protein of unknown function DUF1684 K09164 K09164; uncharacterized protein
D Marky_0412 protein of unknown function DUF309 K09763 K09763; uncharacterized protein
D Marky_1056 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D Marky_0824 acid phosphatase/vanadium-dependent haloperoxidase related protein K09775 K09775; uncharacterized protein
D Marky_1182 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D Marky_0113 protein of unknown function DUF456 K09793 K09793; uncharacterized protein
D Marky_1969 UPF0753 protein K09822 K09822; uncharacterized protein
D Marky_1696 protein of unknown function DUF402 K07586 ygaC; uncharacterized protein
D Marky_0861 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 28, 2025