+E Transcription factors KO #

  Transcription Factors - Mycolicibacterium helvum

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AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C GRAS C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D MHEL_25860 hypothetical protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MHEL_06380 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family D MHEL_18310 putative HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor C DeoR family D MHEL_49720 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D MHEL_52150 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D MHEL_18280 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D MHEL_20230 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor C LacI family D MHEL_02200 DNA-binding protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor C GntR family D MHEL_48120 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D MHEL_34220 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MHEL_54080 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MHEL_03120 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MHEL_12890 putative GntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MHEL_19190 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MHEL_30850 transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MHEL_36520 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MHEL_40590 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MHEL_42610 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MHEL_52330 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MHEL_57330 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D MHEL_29840 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D MHEL_03780 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MHEL_13040 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MHEL_52610 hypothetical protein K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D MHEL_01880 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D MHEL_24010 ethR; HTH-type transcriptional regulator EthR K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D MHEL_48860 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D MHEL_39450 putative transcriptional regulator, TetR family protein K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MHEL_47490 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MHEL_23240 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MHEL_27600 kstR; HTH-type transcriptional repressor KstR K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MHEL_43760 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MHEL_27770 kstR2; HTH-type transcriptional repressor KstR2 K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MHEL_31020 hypothetical protein K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MHEL_11910 mftR; putative mycofactocin biosynthesis transcriptional regulator MftR K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system D MHEL_22690 HTH-type transcriptional repressor K22295 K22295; TetR/AcrR family transcriptional regulator, repressor for neighboring sulfatase D MHEL_30910 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response C Lrp/AsnC family D MHEL_35240 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D MHEL_35770 lrpA; transcriptional regulator LrpA K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D MHEL_01020 LuxR family transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D MHEL_31550 helix-turn-helix transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism C MarR family D MHEL_48500 hypothetical protein K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator D MHEL_50960 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D MHEL_33110 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D MHEL_16810 hspR; MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR C Fur family D MHEL_00900 furB; transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D MHEL_51660 furA; transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator C IclR family D MHEL_37670 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D MHEL_19570 transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor C CRP/FNR family D MHEL_26600 putative Crp/Fnr-family transriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family D MHEL_33020 hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D MHEL_42810 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D MHEL_32710 putative transcriptional regulator, ArsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D MHEL_44460 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D MHEL_00890 transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D MHEL_38100 DNA-binding protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D MHEL_14980 putative transcriptional regulatory protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D MHEL_45270 clgR; transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family C Other families D MHEL_45630 ideR; iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D MHEL_44870 DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D MHEL_53330 blaI_2; transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D MHEL_36150 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D MHEL_59400 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D MHEL_24100 secretion protein EspR K27097 espR; ESX-1-secreted protein regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D MHEL_34470 whiB3_1; putative transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MHEL_36260 whiB2; transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MHEL_36840 whiB1; transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MHEL_37560 whiB3_2; redox-responsive transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MHEL_26540 whiB4; transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MHEL_21470 whiB5; transcriptional regulator WhiB5 K18956 whiB5; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MHEL_37150 whiB; transcriptional regulator WhiB K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MHEL_58030 hypothetical protein K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MHEL_19510 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MHEL_37510 pucR_2; CdaR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D MHEL_51520 putative regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D MHEL_07530 pucR_1; PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D MHEL_22120 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MHEL_27470 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D MHEL_55220 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D MHEL_01050 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D MHEL_23250 aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D MHEL_12240 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D MHEL_47810 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D MHEL_39150 paiB; transcriptional regulator K07734 paiB; transcriptional regulator D MHEL_22280 UPF0301 protein K07735 algH; putative transcriptional regulator D MHEL_45560 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D MHEL_58470 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024 #
Classification taken and modified from TRANSFAC 7.0