+E Transcription factors KO
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Transcription Factors - Mycolicibacterium helvum
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C GRAS
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D MHEL_25860 hypothetical protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MHEL_06380 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
C LysR family
D MHEL_18310 putative HTH-type transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
C DeoR family
D MHEL_49720 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D MHEL_52150 DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D MHEL_18280 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D MHEL_20230 D-beta-D-heptose 1-phosphate adenosyltransferase K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
C LacI family
D MHEL_02200 DNA-binding protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
C GntR family
D MHEL_48120 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D MHEL_34220 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D MHEL_54080 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D MHEL_03120 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D MHEL_12890 putative GntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D MHEL_19190 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D MHEL_30850 transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D MHEL_36520 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D MHEL_40590 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D MHEL_42610 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D MHEL_52330 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D MHEL_57330 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D MHEL_29840 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
C TetR/AcrR family
D MHEL_03780 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D MHEL_13040 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D MHEL_52610 hypothetical protein K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D MHEL_01880 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D MHEL_24010 ethR; HTH-type transcriptional regulator EthR K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D MHEL_48860 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D MHEL_39450 putative transcriptional regulator, TetR family protein K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D MHEL_47490 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D MHEL_23240 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D MHEL_27600 kstR; HTH-type transcriptional repressor KstR K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D MHEL_43760 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D MHEL_27770 kstR2; HTH-type transcriptional repressor KstR2 K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D MHEL_31020 hypothetical protein K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D MHEL_11910 mftR; putative mycofactocin biosynthesis transcriptional regulator MftR K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system
D MHEL_22690 HTH-type transcriptional repressor K22295 K22295; TetR/AcrR family transcriptional regulator, repressor for neighboring sulfatase
D MHEL_30910 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
C Lrp/AsnC family
D MHEL_35240 AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D MHEL_35770 lrpA; transcriptional regulator LrpA K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
D MHEL_01020 LuxR family transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
D MHEL_31550 helix-turn-helix transcriptional regulator K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism
C MarR family
D MHEL_48500 hypothetical protein K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D MHEL_50960 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D MHEL_33110 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D MHEL_16810 hspR; MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
C Fur family
D MHEL_00900 furB; transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D MHEL_51660 furA; transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
C IclR family
D MHEL_37670 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D MHEL_19570 transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
C CRP/FNR family
D MHEL_26600 putative Crp/Fnr-family transriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
C Rrf2 family
D MHEL_33020 hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D MHEL_42810 transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
C ArsR family
D MHEL_32710 putative transcriptional regulator, ArsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D MHEL_44460 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D MHEL_00890 transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
C XRE family
D MHEL_38100 DNA-binding protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D MHEL_14980 putative transcriptional regulatory protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D MHEL_45270 clgR; transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator
C PadR family
C Other families
D MHEL_45630 ideR; iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D MHEL_44870 DtxR family transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D MHEL_53330 blaI_2; transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D MHEL_36150 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D MHEL_59400 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D MHEL_24100 secretion protein EspR K27097 espR; ESX-1-secreted protein regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D MHEL_34470 whiB3_1; putative transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D MHEL_36260 whiB2; transcriptional regulator WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D MHEL_36840 whiB1; transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D MHEL_37560 whiB3_2; redox-responsive transcriptional regulator WhiB3 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D MHEL_26540 whiB4; transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D MHEL_21470 whiB5; transcriptional regulator WhiB5 K18956 whiB5; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D MHEL_37150 whiB; transcriptional regulator WhiB K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D MHEL_58030 hypothetical protein K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D MHEL_19510 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D MHEL_37510 pucR_2; CdaR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D MHEL_51520 putative regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D MHEL_07530 pucR_1; PucR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D MHEL_22120 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D MHEL_27470 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D MHEL_55220 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D MHEL_01050 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D MHEL_23250 aminopyrimidine aminohydrolase K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D MHEL_12240 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D MHEL_47810 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D MHEL_39150 paiB; transcriptional regulator K07734 paiB; transcriptional regulator
D MHEL_22280 UPF0301 protein K07735 algH; putative transcriptional regulator
D MHEL_45560 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D MHEL_58470 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 29, 2024
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Classification taken and modified from TRANSFAC 7.0