+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Mannheimia haemolytica M42548

% ! ACRISPR-Cas system B Universal Cas proteins C MHH_c16490 cas1; CRISPR-associated endonuclease Cas1, subtype I-C/DVULG K15342 cas1; CRISP-associated protein Cas1 C MHH_c16500 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D MHH_c23760 Cas3-like CRISPR-associated protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D MHH_c16450 cas8c; CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG K19117 csd1; CRISPR-associated protein Csd1 D MHH_c16460 cas7; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG K19118 csd2; CRISPR-associated protein Csd2 D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D MHH_c16440 cas5; CRISPR-associated protein Cas5, subtype I-C/DVULG K19119 cas5d; CRISPR-associated protein Cas5d C Subtype I-D factors D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C MHH_c01680 HsdR-like host restriction; endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C MHH_c24310 putative hsdR-like endonuclease HindVIIP K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C MHH_c12130 putative HsdS-like type I specificity K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C MHH_c01720 hsdS1; specificity determinant HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C MHH_c01740 hsdS2; specificity determinant HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C MHH_c12120 putative HsdS-like type I specificity K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C MHH_c24300 putative hsdS-like specificity determinant HindVIIP K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C MHH_c01690 HsdM-like host modification; DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C MHH_c24290 putative hsdM-like DNA methylase HindVIIP K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C MHH_c12110 putative HsdM-like methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D MHH_c27130 dam; DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72] D MHH_c08200 eco57IBM; site-specific modification DNA-methyltransferase Eco57IBM K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D MHH_c15350 Dam-like adenine-specific DNA methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type III R-M system C MHH_c20220 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5] C MHH_c23800 res; type III restriction-modification system protein Res K01156 res; type III restriction enzyme [EC:3.1.21.5] C MHH_c20200 type III restriction-modification system K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C MHH_c23810 mod; type III restriction-modification system protein Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS D MHH_c02820 pemK; PemK toxin of the PemK-PemI toxin-antitoxin system K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D MHH_c02810 pemI; PemI toxin of the PemK-PemI toxin-antitoxin system K18842 chpS; antitoxin ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D MHH_c10960 putative RelE-like phage protein K06218 relE; mRNA interferase RelE/StbE D MHH_c12860 prevent-host-death family protein K18923 stbD; antitoxin StbD C YafQ-dinJ D MHH_c25730 toxin YafQ K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D MHH_c02370 toxin of the YafQ-DinJ toxin-antitoxin system K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D MHH_c02380 putative RelB-antitoxin and DNA-binding transcriptional repressor K07473 dinJ; DNA-damage-inducible protein J D MHH_c25720 DinJ-like antitoxin K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM C HipA-HipB D MHH_c14830 HipA-like domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D MHH_c22220 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB D MHH_c18050 hypothetical protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D MHH_c17280 hypothetical protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D MHH_c17270 hypothetical protein UPF0150 K18843 hicB; antitoxin HicB D MHH_c18040 hicB; antitoxin HicB K18843 hicB; antitoxin HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD D MHH_c02940 putative plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4 D MHH_c18680 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D MHH_c14980 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4 D MHH_c02930 putative addiction module antidote protein K07746 parD1_3_4; antitoxin ParD1/3/4 D MHH_c20950 putative addiction module antidote protein K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd C HigB-HigA D MHH_c17680 plasmid maintenance system killer K07334 higB-1; toxin HigB-1 D MHH_c17690 putative HTH domain-containing virulence-associated protein K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB D MHH_c10840 vapC; ribonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D MHH_c10830 vagC; putative virulence protein VagC K18829 mvpT; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D MHH_c05280 putative vapC-like nucleic acid-binding protein K07062 fitB; toxin FitB [EC:3.1.-.-] C BC_0920-BC_0921 C Type II TA system related factors D MHH_c00840 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MHH_c23530 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D MHH_c19730 parC; DNA topoisomerase 4 - subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D MHH_c25990 parE; DNA topoisomerase 4 - subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D MHH_c00880 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system D MHH_c22770 hypothetical protein K19167 abiQ; protein AbiQ B Type IV TA system C YeeV-YeeU C CptA-CptB D MHH_c07330 hypothetical protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C MHH_c15630 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023