+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Mannheimia haemolytica M42548
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ACRISPR-Cas system
B Universal Cas proteins
C MHH_c16490 cas1; CRISPR-associated endonuclease Cas1, subtype I-C/DVULG K15342 cas1; CRISP-associated protein Cas1
C MHH_c16500 cas2; CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D MHH_c23760 Cas3-like CRISPR-associated protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-B factors
D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D MHH_c16450 cas8c; CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG K19117 csd1; CRISPR-associated protein Csd1
D MHH_c16460 cas7; CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG K19118 csd2; CRISPR-associated protein Csd2
D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D MHH_c16440 cas5; CRISPR-associated protein Cas5, subtype I-C/DVULG K19119 cas5d; CRISPR-associated protein Cas5d
C Subtype I-D factors
D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D MHH_c16470 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C MHH_c01680 HsdR-like host restriction; endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C MHH_c24310 putative hsdR-like endonuclease HindVIIP K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C MHH_c12130 putative HsdS-like type I specificity K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C MHH_c01720 hsdS1; specificity determinant HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C MHH_c01740 hsdS2; specificity determinant HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C MHH_c12120 putative HsdS-like type I specificity K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C MHH_c24300 putative hsdS-like specificity determinant HindVIIP K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C MHH_c01690 HsdM-like host modification; DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C MHH_c24290 putative hsdM-like DNA methylase HindVIIP K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C MHH_c12110 putative HsdM-like methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D MHH_c27130 dam; DNA adenine methylase Dam K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D MHH_c08200 eco57IBM; site-specific modification DNA-methyltransferase Eco57IBM K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D MHH_c15350 Dam-like adenine-specific DNA methylase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type III R-M system
C MHH_c20220 type III restriction protein res subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
C MHH_c23800 res; type III restriction-modification system protein Res K01156 res; type III restriction enzyme [EC:3.1.21.5]
C MHH_c20200 type III restriction-modification system K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
C MHH_c23810 mod; type III restriction-modification system protein Mod K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
D MHH_c02820 pemK; PemK toxin of the PemK-PemI toxin-antitoxin system K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-]
D MHH_c02810 pemI; PemI toxin of the PemK-PemI toxin-antitoxin system K18842 chpS; antitoxin ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
D MHH_c10960 putative RelE-like phage protein K06218 relE; mRNA interferase RelE/StbE
D MHH_c12860 prevent-host-death family protein K18923 stbD; antitoxin StbD
C YafQ-dinJ
D MHH_c25730 toxin YafQ K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D MHH_c02370 toxin of the YafQ-DinJ toxin-antitoxin system K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D MHH_c02380 putative RelB-antitoxin and DNA-binding transcriptional repressor K07473 dinJ; DNA-damage-inducible protein J
D MHH_c25720 DinJ-like antitoxin K07473 dinJ; DNA-damage-inducible protein J
C YoeB-YefM
C HipA-HipB
D MHH_c14830 HipA-like domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D MHH_c22220 HipA-like protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
C HicA-HicB
D MHH_c18050 hypothetical protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D MHH_c17280 hypothetical protein K07339 hicA; mRNA interferase HicA [EC:3.1.-.-]
D MHH_c17270 hypothetical protein UPF0150 K18843 hicB; antitoxin HicB
D MHH_c18040 hicB; antitoxin HicB K18843 hicB; antitoxin HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
D MHH_c02940 putative plasmid stabilization protein K19092 parE1_3_4; toxin ParE1/3/4
D MHH_c18680 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D MHH_c14980 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D MHH_c02930 putative addiction module antidote protein K07746 parD1_3_4; antitoxin ParD1/3/4
D MHH_c20950 putative addiction module antidote protein K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
C HigB-HigA
D MHH_c17680 plasmid maintenance system killer K07334 higB-1; toxin HigB-1
D MHH_c17690 putative HTH domain-containing virulence-associated protein K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
D MHH_c10840 vapC; ribonuclease VapC K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D MHH_c10830 vagC; putative virulence protein VagC K18829 mvpT; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
D MHH_c05280 putative vapC-like nucleic acid-binding protein K07062 fitB; toxin FitB [EC:3.1.-.-]
C BC_0920-BC_0921
C Type II TA system related factors
D MHH_c00840 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D MHH_c23530 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D MHH_c19730 parC; DNA topoisomerase 4 - subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D MHH_c25990 parE; DNA topoisomerase 4 - subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D MHH_c00880 gltX; glutamyl-tRNA synthetase GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
D MHH_c22770 hypothetical protein K19167 abiQ; protein AbiQ
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D MHH_c07330 hypothetical protein K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C MHH_c15630 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023