+F Chromosome and associated proteins KO
#
Chromosome and Associated Proteins - Mannheimia haemolytica M42548
%
!
AEukaryotic type
B Sister chromatid cohesion proteins
C Cohesin complex
C Adherin complex
C CTF18-RFC complex
C Fork protection complex
C Other sister chromatid cohesion factors
B Meiosis-specific proteins
C Cohesin complex and associated proteins
C Synaptonemal complex
C DSB formation-related proteins
C Others
B Nucleosome assembly factors
C Histones
C Histone chaperones
D Nucleoplasmins
D NAPs (Nucleosome assembly proteins)
D CAF-1
D FACT complex
D Other Histone chaperones and regulators
C HMG (high mobility group) proteins
B Histone modification proteins
C HATs (histone acetyltransferases)
C HAT complexes
D PCAF complex
D STAGA complex
D TFTC complex
D TIP60 complex
D HBO1 complex
D MOZ/MORF complex
D SAGA complex
D SLIK complex
D ADA-HAT complex
D HAT-A2 complex
D ATAC complex
D HATB complex
D NSL complex
D MSL complex
D NuA3 complex
D NuA4 complex
D SAS complex
C HDACs (histone deacetylases)
D Class I HDACs
D Class II HDACs
D SIRTs (sirtuins, class III HDACs)
D Class IV HDACs
C HDAC complexes
D Sin3A-HDAC complex
D BRAF-HDAC complex
D REST complex
D SHIP complex
D MiDAC complex
D SMART complex
D Other HDAC associated proteins
C HMTs (histone methyltransferases)
D HKMTs (histone lysine methyltransferases)
D PRMTs (protein arginine metyltransferases)
C HMT complexes
D COMPASS/SET1 complex
D COMPASS/SET1 complex (yeast)
D MLL-HCF complex
D MLL3/MLL4 complex
D Dot1-containing complex
C Histone demethylases
C Polycomb repressive complex (PRC) and associated proteins
D Canonical PRC1 (PRC1.2/1.4)
E PRC1.4 specific proteins
D Noncanonical PRC1 (PRC1.1)
D Noncanonical PRC1 (PRC1.3/1.5)
D Noncanonical PRC1 (PRC1.6)
D PRC2.1
D PRC2.2
D PR-DUB complex
D Other PRC associated proteins
C Sir proteins
C Other histone modification proteins
B Chromosome condensation proteins
C Condensin I
C Condensin II
C Other regulators of chromosome condensation
B Centromeric chromatin formation proteins
C Kinetochore proteins
D Centromere proteins
D CPC (chromosomal passenger complex)
D KMN network proteins
E MIS12 complex
E NDC80 complex
D Mis6 complex
D COMA complex
D NMS complex
E NDC80 complex
E MIND kinetochore complex
D MIS16-MIS18 complex
D DASH complex
D CBF3 complex
D Others
C SAC (spindle assembly checkpoint) factors
D Core SAC proteins
D Motor proteins
E RZZ complex
E Dynein complex
D Protein kinases
D Others
C Other centromeric chromatin formation proteins
D Shugoshin
D PP2A (protein phosphatase 2A)
B Heterochromatin formation proteins
C HP1 (heterochromatin protein 1)
C MBPs (metylated DNA binding proteins)
C Other heterochromatin formation proteins
B Gene silencing
C RISC (RNA-induced silencing complex)
C piRNA pathway
C RNA interference (RNAi) pathway
D RITS (RNA-induced transcriptional silencing) complex
D RDRC (RNA-directed RNA polymerase complex)
D Other RNAi proteins
C microRNA pathway
D Microprocessor complex
E MHH_c24060 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D RISC loading complex
D Other miRNA pathway proteins
C Transposable elements
B Centrosome formation proteins
C Centriole proteins
C Pericentriolar materials (PCM)
D Centriolar satellite
D Other PCM proteins
C Cyclins
C Kinases and associated factors
D Kinase anchoring protein
C Microtubules and associated factors
D gamma-tubulin ring complex
D Other tubulins
D Dynactin complex
D BRISC complex
D Microtubule-associated proteins
C Augmin complex
C Centrosome duplication proteins
D Centriole replication proteins
D Regulators of centriole replication
D Other centrosome duplication proteins
C Nde1-Su48 complex
C LINC complex
C 3M complex
C Other centriole associated proteins
C Spindle formation proteins
B Sister chromatid separation proteins
C Securin and associated proteins
C Separase
C APC/C complex
C Aurora kinases
D Regulators of Aurora kinases
C TACC proteins
C Polo kinases
C Early mitotic inhibitors
B Chromatin remodeling factors
C BAF complex
C PBAF complex
C GBAF(ncBAF) complex
C CHRAC complex
C RSF complex
C WICH complex
C B-WICH complex
C NORC complex
C BRF complex
C NuRD complex
C NuRF complex
C NuRF complex (fruit fly)
C CERF complex
C SRCAP complex
C INO80 complex
C INO80 complex (yeast)
C RSC complex
C SWI/SNF complex
C SWR1 complex
C ASTRA complex
C Other chromatin remodeling factors
#
AProkaryotic type
B Nucleoid associated proteins
C HNS (histone-like nucleoid structuring protein)
D MHH_c17180 hns; DNA-binding protein Hns K03746 hns; DNA-binding protein H-NS
C HU (heat unstable protein)
D MHH_c00590 hupA; transcriptional dual regulator HU-alpha HupA K05787 hupA; DNA-binding protein HU-alpha
C IHF (integration host factor)
D MHH_c19440 ihfA; integration host factor - subunit alpha IhfA K04764 ihfA; integration host factor subunit alpha
D MHH_c19490 ihfB; integration host factor - subunit beta IhfB K05788 ihfB; integration host factor subunit beta
C Other nucleoid associated proteins
D MHH_c00010 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D MHH_c00470 gmhA1; D-sedoheptulose 7-phosphate isomerase GmhA K12961 diaA; DnaA initiator-associating protein
D MHH_c02130 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D MHH_c27500 fis; DNA-binding transcriptional dual regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D MHH_c02400 hfq; HF-I, host factor for RNA phage Q beta replication Hfq K03666 hfq; host factor-I protein
D MHH_c20750 lrp; leucine-responsive regulatory protein Irp K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D MHH_c21150 ndpA; DNA-associated protein NdpA K06899 ndpA; nucleoid-associated protein
B Chromosome partitioning proteins
C MukBEF complex
D MHH_c19170 mukB; chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D MHH_c19160 mukE; chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D MHH_c19150 mukF; chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
C Condensin-like complex
C Divisome proteins
D MHH_c00830 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D MHH_c16160 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D MHH_c28080 ftsE; cell division ABC transport system - ATP binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D MHH_c00730 ftsI; penicillin-binding protein FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D MHH_c20740 FtsK-like DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D MHH_c00720 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D MHH_c08130 putative FtsN-like cell division protein K03591 ftsN; cell division protein FtsN
D MHH_c00820 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D MHH_c00780 ftsW; lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D MHH_c28070 ftsX; truncated cell division ABC transport system - membrane protein FtsX K09811 ftsX; cell division transport system permease protein
D MHH_c00840 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D MHH_c27780 ZipA-like protein K03528 zipA; cell division protein ZipA
D MHH_c00550 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D MHH_c20640 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D MHH_c26220 AmiB-like N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D MHH_c19230 acrA; AcrA membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
C Inhibitors of FtsZ assembly
D MHH_c08700 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
C Other chromosome partitioning proteins
D MHH_c23620 seqA; negative modulator of initiation of replication SeqA K03645 seqA; negative modulator of initiation of replication
D MHH_c23530 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D MHH_c23520 mreC; cell shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D MHH_c23510 mreD; Rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D MHH_c04840 mrdB; rod shape-determining membrane protein MrdB K05837 rodA; rod shape determining protein RodA
D MHH_c15050 putative Soj-like chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D MHH_c05330 putative chromosome partitioning ATPase K03496 parA; chromosome partitioning protein
D MHH_c08250 putative stage 0 sporulation protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D MHH_c08260 putative transcriptional regulator K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D MHH_c19730 parC; DNA topoisomerase 4 - subunit A ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D MHH_c25990 parE; DNA topoisomerase 4 - subunit B ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D MHH_c05480 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D MHH_c05500 rsmG; 16S rRNA methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D MHH_c07260 xerC; site-specific recombinase XerC K03733 xerC; integrase/recombinase XerC
D MHH_c05090 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D MHH_c26080 mrp; ATPase protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D MHH_c12270 putative Fic family filamentation induced by cAMP cell division protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D MHH_c10560 engB; ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024