+D GENES KO
#
KEGG Orthology (KO) - Mycolicibacter sinensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:mjd00010]
D JDM601_0673 carbohydrate kinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM601_0892 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM601_0646 pfkA_1; 6-phosphofructokinase PfkA_1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_2732 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_1051 glpX; fructose 16-bisphosphatase GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDM601_0357 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM601_2274 tpiA; triosephosphate isomerase Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDM601_2276 gap; glyceraldehyde 3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDM601_2275 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JDM601_0477 gpmA; phosphoglycerate mutase 1 Gpm1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM601_0988 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM601_2128 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDM601_3758 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JDM601_3815 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JDM601_1654 aceE; pyruvate dehydrogenase E1 component AceE K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JDM601_1688 sucB; pyruvate dehydrogenase (E2 component) SucB K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_1452 porA; pyruvate:ferredoxin oxidoreductase PorA alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDM601_1453 porB; pyruvate:ferredoxin oxidoreductase PorB beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDM601_0149 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_3610 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_1950 adhA; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDM601_2391 adhC; NADP-dependent alcohol dehydrogenase AdhC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM601_2777 adh; NADP-dependent alcohol dehydrogenase Adh K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0444 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D JDM601_3945 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDM601_0342 conserved hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JDM601_2443 ppgK; polyphosphate glucokinase PpgK K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D JDM601_0174 pckA; iron-regulated phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:mjd00020]
D JDM601_0813 citA; citrate synthase II CitA K01647 CS; citrate synthase [EC:2.3.3.1]
D JDM601_0816 gltA; citrate synthase I GltA2 K01647 CS; citrate synthase [EC:2.3.3.1]
D JDM601_1082 gltA1; citrate synthase I GltA1 K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D JDM601_2082 acn; aconitate hydratase Acn K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JDM601_2239 acn; aconitate hydratase Acn K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JDM601_3187 icd2; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JDM601_1216 kgd; alpha-ketoglutarate decarboxylase Kgd K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_1452 porA; pyruvate:ferredoxin oxidoreductase PorA alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDM601_1453 porB; pyruvate:ferredoxin oxidoreductase PorB beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDM601_0898 sucD; succinyl-CoA synthetase (alpha chain) SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDM601_0897 sucC; succinyl-CoA synthetase (beta chain) SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDM601_0235 sdhA; succinate dehydrogenase (iron-sulfur subunit) SdhA_1 K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDM601_3145 sdhA; succinate dehydrogenase (flavoprotein subunit) SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDM601_0234 sdhB_1; succinate dehydrogenase (iron-sulfur subunit) SdhB_1 K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDM601_3146 sdhB; succinate dehydrogenase (iron-sulfur protein subunit) SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDM601_3143 sdhC; succinate dehydrogenase (cytochrome B-556 subunit) SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JDM601_3144 sdhD; succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JDM601_1050 fumC; fumarase Fum K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JDM601_1212 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDM601_2572 mqo; malate:quinone oxidoreductase Mqo K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D JDM601_2670 pca; pyruvate carboxylase Pca K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JDM601_0174 pckA; iron-regulated phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JDM601_1654 aceE; pyruvate dehydrogenase E1 component AceE K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JDM601_1688 sucB; pyruvate dehydrogenase (E2 component) SucB K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:mjd00030]
D JDM601_0892 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM601_1977 zwf1; glucose-6-phosphate 1-dehydrogenase Zwf1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM601_2269 zwf2; glucose-6-phosphate 1-dehydrogenase Zwf2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM601_2271 devB; 6-phosphogluconolactonase DevB K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D JDM601_1938 gnd1; 6-phosphogluconate dehydrogenase Gnd1 K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDM601_1978 gnd2; 6-phosphogluconate dehydrogenase decarboxylating Gnd2 K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDM601_2290 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JDM601_2267 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JDM601_2268 tal; transaldolase Tal K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JDM601_1443 rpiB; ribose/galactose isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JDM601_1953 xfp; D-xylulose 5-phosphate Xfp K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D JDM601_0466 deoC; deoxyribose-phosphate aldolase DeoC K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JDM601_1478 ribokinase-like domain-containing protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D JDM601_0980 prsA; ribose-phosphate pyrophosphokinase PrsA K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JDM601_0357 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM601_1051 glpX; fructose 16-bisphosphatase GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDM601_0646 pfkA_1; 6-phosphofructokinase PfkA_1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_2732 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:mjd00040]
D JDM601_0941 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM601_2290 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JDM601_1547 glpK; glycerol kinase GlpK K00854 xylB; xylulokinase [EC:2.7.1.17]
D JDM601_0112 oxidoreductase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D JDM601_2363 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:mjd00051]
D JDM601_3004 manA; mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JDM601_3006 manB; phosphomannomutase PmmA K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JDM601_3133 pmmB; phosphomannomutase PmmB K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JDM601_3015 manB; d-alpha-D-mannose-1-phosphate guanylyltransferase ManB K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JDM601_2363 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D JDM601_0646 pfkA_1; 6-phosphofructokinase PfkA_1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_2732 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_1051 glpX; fructose 16-bisphosphatase GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDM601_0112 oxidoreductase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D JDM601_0357 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM601_2274 tpiA; triosephosphate isomerase Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDM601_1443 rpiB; ribose/galactose isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:mjd00052]
D JDM601_0342 conserved hypothetical protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JDM601_0567 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6]
D JDM601_0566 galT; galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JDM601_0498 galE2; UDP-glucose 4-epimerase GalE2 K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM601_3920 galE1; UDP-glucose 4-epimerase GalE1 K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM601_0941 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM601_0673 carbohydrate kinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM601_4127 glf; UDP-galactopyranose mutase Glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D JDM601_0646 pfkA_1; 6-phosphofructokinase PfkA_1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_2732 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_1434 aglA; alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:mjd00500]
D JDM601_1434 aglA; alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JDM601_0941 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM601_2646 celA; cellobiohydrolase a (14-beta-cellobiosidase a) CelA K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D JDM601_1188 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JDM601_2752 transferase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D JDM601_1328 glgB; 14-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JDM601_3863 glgB; 14-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JDM601_2751 conserved hypothetical protein K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JDM601_1330 glgP; glycogen phosphorylase GlgP K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JDM601_3861 treS; trehalose synthase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D JDM601_3860 malQ; 4-alpha-glucanotransferase MalQ K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D JDM601_3862 conserved hypothetical protein K16146 pep2; maltokinase [EC:2.7.1.175]
D JDM601_1329 glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D JDM601_3864 glycosidase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D JDM601_1187 glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D JDM601_2167 treX; maltooligosyltrehalose synthase TreX K01214 ISA; isoamylase [EC:3.2.1.68]
D JDM601_3859 treX; maltooligosyltrehalose synthase TreX K01214 ISA; isoamylase [EC:3.2.1.68]
D JDM601_3858 treY; maltooligosyltrehalose synthase TreY K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D JDM601_3856 treZ; maltooligosyltrehalose trehalohydrolase TreZ K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D JDM601_3621 otsA; alpha alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D JDM601_3209 otsB2; trehalose-6-phosphate phosphatase OtsB2 K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D JDM601_1510 glycosyl hydrolase K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28]
D JDM601_0673 carbohydrate kinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM601_0892 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:mjd00620]
D JDM601_3945 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDM601_1452 porA; pyruvate:ferredoxin oxidoreductase PorA alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDM601_1453 porB; pyruvate:ferredoxin oxidoreductase PorB beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDM601_1654 aceE; pyruvate dehydrogenase E1 component AceE K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JDM601_1688 sucB; pyruvate dehydrogenase (E2 component) SucB K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_3680 mhpF_1; acetaldehyde dehydrogenase MhpF_1 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D JDM601_1950 adhA; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDM601_2391 adhC; NADP-dependent alcohol dehydrogenase AdhC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM601_0149 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_3610 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_2777 adh; NADP-dependent alcohol dehydrogenase Adh K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D JDM601_3027 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM601_3028 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM601_2128 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDM601_2934 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM601_3045 accA3; bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha chain AccA3 K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D JDM601_1648 accD6; acetyl/propionyl-CoA carboxylase (beta subunit) AccD6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D JDM601_2650 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0444 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D JDM601_1961 lldD2; L-lactate dehydrogenase (cytochrome) LldD2 K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D JDM601_2796 ilvB1_2; acetolactate synthase (large subunit) IlvB1_2 K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D JDM601_3072 ilvB1_2; acetolactate synthase (large subunit) IlvB1_2 K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D JDM601_2615 lldD1_1; L-lactate dehydrogenase (cytochrome) LldD1_1 K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4]
D JDM601_0067 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D JDM601_2368 Zn-dependent glyoxylase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D JDM601_1213 mez_1; (NAD) dependent malate oxidoreductase Mez_1 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JDM601_1878 mez; (NAD) dependent malate oxidoreductase Mez K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JDM601_2670 pca; pyruvate carboxylase Pca K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JDM601_1212 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDM601_2572 mqo; malate:quinone oxidoreductase Mqo K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D JDM601_1050 fumC; fumarase Fum K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JDM601_0174 pckA; iron-regulated phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JDM601_3758 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JDM601_3815 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JDM601_1929 glcB; malate synthase G GlcB K01638 aceB; malate synthase [EC:2.3.3.9]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3993 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mjd00630]
D JDM601_0458 icl; isocitrate lyase Icl K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D JDM601_2004 aceAb; isocitrate lyase AceAb K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D JDM601_1929 glcB; malate synthase G GlcB K01638 aceB; malate synthase [EC:2.3.3.9]
D JDM601_1212 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDM601_0813 citA; citrate synthase II CitA K01647 CS; citrate synthase [EC:2.3.3.1]
D JDM601_0816 gltA; citrate synthase I GltA2 K01647 CS; citrate synthase [EC:2.3.3.1]
D JDM601_1082 gltA1; citrate synthase I GltA1 K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D JDM601_2082 acn; aconitate hydratase Acn K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JDM601_2239 acn; aconitate hydratase Acn K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JDM601_3945 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1325 gloA_1; glyoxalase GloA_1 K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JDM601_3045 accA3; bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha chain AccA3 K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D JDM601_3039 accD5; propionyl-CoA carboxylase beta chain 5 AccD5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JDM601_3040 conserved hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D JDM601_1648 accD6; acetyl/propionyl-CoA carboxylase (beta subunit) AccD6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D JDM601_2221 mutB; methylmalonyl-CoA mutase large subunit MutB K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_2222 mutA; methylmalonyl-CoA mutase small subunit MutA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_0713 mcmA2b; methylmalonyl-CoA mutase alpha subunit McmA2b K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JDM601_0712 mcmA2a; methylmalonyl-CoA mutase beta subunit McmA2a K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDM601_1224 oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D JDM601_1628 oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D JDM601_3050 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D JDM601_3987 katE; catalase KatE K03781 katE; catalase [EC:1.11.1.6]
D JDM601_1663 conserved hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JDM601_1678 glnA2; glutamine synthetase GlnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_1682 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2581 glnA3; glutamine synthetase GlnA3 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_4178 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_1039 glyA; serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM601_1926 gcvB; glycine dehydrogenase GcvB K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JDM601_1692 gcvT; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_1921 gcvH; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D JDM601_1698 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDM601_1216 kgd; alpha-ketoglutarate decarboxylase Kgd K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JDM601_0277 formate dehydrogenase beta subunit selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JDM601_0278 formate dehydrogenase alpha subunit selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JDM601_0276 hybA; Fe-S-cluster-containing hydrogenase HybA K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D JDM601_2660 purU; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:mjd00640]
D JDM601_3945 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDM601_3027 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM601_3028 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM601_1418 pdhA; pyruvate dehydrogenase E1 component (alpha subunit) PdhA K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JDM601_1419 pdhB; pyruvate dehydrogenase E1 component (beta subunit) PdhB K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JDM601_1420 pdhC; dihydrolipoamide S-acetyltransferase E2 component PdhC K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_1578 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_2934 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM601_3045 accA3; bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha chain AccA3 K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D JDM601_1648 accD6; acetyl/propionyl-CoA carboxylase (beta subunit) AccD6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D JDM601_2377 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JDM601_3039 accD5; propionyl-CoA carboxylase beta chain 5 AccD5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JDM601_3040 conserved hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D JDM601_1325 gloA_1; glyoxalase GloA_1 K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JDM601_2221 mutB; methylmalonyl-CoA mutase large subunit MutB K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_2222 mutA; methylmalonyl-CoA mutase small subunit MutA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_0713 mcmA2b; methylmalonyl-CoA mutase alpha subunit McmA2b K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JDM601_0712 mcmA2a; methylmalonyl-CoA mutase beta subunit McmA2a K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDM601_0897 sucC; succinyl-CoA synthetase (beta chain) SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDM601_0898 sucD; succinyl-CoA synthetase (alpha chain) SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDM601_3291 mmsA; methylmalonate semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JDM601_1082 gltA1; citrate synthase I GltA1 K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D JDM601_1080 conserved hypothetical protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D JDM601_2082 acn; aconitate hydratase Acn K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JDM601_2239 acn; aconitate hydratase Acn K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JDM601_1081 methylisocitrate lyase 2 K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D JDM601_0458 icl; isocitrate lyase Icl K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
D JDM601_2004 aceAb; isocitrate lyase AceAb K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30]
C 00650 Butanoate metabolism [PATH:mjd00650]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0459 fadB2; 3-hydroxybutyryl-CoA dehydrogenase FadB2 K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_3680 mhpF_1; acetaldehyde dehydrogenase MhpF_1 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D JDM601_2704 maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D JDM601_0235 sdhA; succinate dehydrogenase (iron-sulfur subunit) SdhA_1 K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDM601_3145 sdhA; succinate dehydrogenase (flavoprotein subunit) SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDM601_0234 sdhB_1; succinate dehydrogenase (iron-sulfur subunit) SdhB_1 K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDM601_3146 sdhB; succinate dehydrogenase (iron-sulfur protein subunit) SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDM601_3143 sdhC; succinate dehydrogenase (cytochrome B-556 subunit) SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JDM601_3144 sdhD; succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JDM601_3245 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM601_2377 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JDM601_0216 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM601_3646 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM601_1452 porA; pyruvate:ferredoxin oxidoreductase PorA alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDM601_1453 porB; pyruvate:ferredoxin oxidoreductase PorB beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDM601_2854 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JDM601_1401 scoA; succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JDM601_2947 scoA; succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JDM601_1402 scoB; succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JDM601_2945 scoB; succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JDM601_0734 ilvG; acetolactate synthase IlvG K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_1629 ilvX; acetohydroxyacid synthase IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_2722 ilvB1; acetolactate synthase (large subunit) IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_2721 ilvH; acetolactate synthase (small subunit) IlvN K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:mjd00660]
D JDM601_0734 ilvG; acetolactate synthase IlvG K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_1629 ilvX; acetohydroxyacid synthase IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_2722 ilvB1; acetolactate synthase (large subunit) IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_2721 ilvH; acetolactate synthase (small subunit) IlvN K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JDM601_0736 acyl-CoA transferase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22]
D JDM601_0897 sucC; succinyl-CoA synthetase (beta chain) SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDM601_0898 sucD; succinyl-CoA synthetase (alpha chain) SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDM601_2691 leuC; 3-isopropylmalate dehydratase (large subunit) LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JDM601_2690 leuD; 3-isopropylmalate dehydratase (small subunit) LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JDM601_2717 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:mjd00562]
D JDM601_0231 suhB; extragenic suppressor protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDM601_2142 impA; inositol-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDM601_4315 ino1; myo-inositol-1-phosphate synthase Ino1 K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D JDM601_2395 pgsA1; pi synthase PgsA1 K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-]
D JDM601_3291 mmsA; methylmalonate semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JDM601_2274 tpiA; triosephosphate isomerase Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:mjd00190]
D JDM601_2859 nuoA; NADH dehydrogenase I (chain a) NuoA (NADH-ubiquinone oxidoreductase chain a) K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D JDM601_2860 nuoB; NADH dehydrogenase I (chain B) NuoB (NADH-ubiquinone oxidoreductase chain B) K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D JDM601_2861 nuoC; NADH dehydrogenase I (chain C) NuoC (NADH-ubiquinone oxidoreductase chain C) K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D JDM601_2862 nuoD; NADH dehydrogenase I (chain D) NuoD (NADH-ubiquinone oxidoreductase chain D) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D JDM601_2863 nuoE; NADH dehydrogenase I (chain E) NuoE (NADH-ubiquinone oxidoreductase chain E) K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D JDM601_2864 nuoF; NADH dehydrogenase I (chain F) NuoF (NADH-ubiquinone oxidoreductase chain F) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D JDM601_2865 nuoG; NADH dehydrogenase I (chain G) NuoG (NADH-ubiquinone oxidoreductase chain G) K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D JDM601_2866 nuoH; NADH dehydrogenase I (chain H) NuoH (NADH-ubiquinone oxidoreductase chain H) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D JDM601_2867 nuoI; NADH dehydrogenase I (chain I) NuoI (NADH-ubiquinone oxidoreductase chain I) K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D JDM601_2868 nuoJ; NADH dehydrogenase I (chain J) NuoJ (NADH-ubiquinone oxidoreductase chain J) K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D JDM601_2869 nuoK; NADH dehydrogenase I (chain K) NuoK (NADH-ubiquinone oxidoreductase chain K) K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D JDM601_2870 nuoL; NADH dehydrogenase I (chain L) NuoL (NADH-ubiquinone oxidoreductase chain L) K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D JDM601_2871 nuoM; NADH dehydrogenase I (chain M) NuoM (NADH-ubiquinone oxidoreductase chain M) K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D JDM601_2872 nuoN; NADH dehydrogenase I (chain N) NuoN (NADH-ubiquinone oxidoreductase chain N) K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D JDM601_0961 dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JDM601_1943 ndh; NADH dehydrogenase Ndh K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JDM601_0235 sdhA; succinate dehydrogenase (iron-sulfur subunit) SdhA_1 K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDM601_3145 sdhA; succinate dehydrogenase (flavoprotein subunit) SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDM601_0234 sdhB_1; succinate dehydrogenase (iron-sulfur subunit) SdhB_1 K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDM601_3146 sdhB; succinate dehydrogenase (iron-sulfur protein subunit) SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDM601_3143 sdhC; succinate dehydrogenase (cytochrome B-556 subunit) SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JDM601_3144 sdhD; succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JDM601_1708 qcrA; Rieske iron-sulfur protein QcrA K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D JDM601_1707 qcrB; ubiquinol-cytochrome C reductase QcrB K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D JDM601_1709 qcrC; ubiquinol-cytochrome C reductase QcrC K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D JDM601_2265 ctaB; cytochrome C oxidase assembly factor CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D JDM601_1703 integral membrane protein K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D JDM601_1710 ctaE; cytochrome C oxidase (subunit III) CtaE K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D JDM601_1170 ctaD; cytochrome C oxidase polypeptide I CtaD K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JDM601_2771 ctaD; cytochrome C oxidase polypeptide I CtaD K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JDM601_1702 ctaC; transmembrane cytochrome C oxidase (subunit II) CtaC K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JDM601_2260 antibiotic ABC transporter transmembrane protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JDM601_1307 atpA; ATP synthase alpha chain AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JDM601_1309 atpD; ATP synthase beta chain AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JDM601_1308 atpG; ATP synthase gamma chain AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JDM601_1306 atpH; ATP synthase delta chain AtpH K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JDM601_1310 atpC; ATP synthase epsilon chain AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JDM601_1303 atpB; ATP synthase a chain AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JDM601_1305 atpF; ATP synthase B chain AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JDM601_1304 atpE; ATP synthase C chain AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JDM601_3911 ppa; inorganic pyrophosphatase Ppa K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D JDM601_2687 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JDM601_2968 pvdS; transcriptional regulatory protein PvdS K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:mjd00710]
D JDM601_2275 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JDM601_2276 gap; glyceraldehyde 3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDM601_0357 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM601_1051 glpX; fructose 16-bisphosphatase GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDM601_2267 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JDM601_1443 rpiB; ribose/galactose isomerase RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JDM601_2274 tpiA; triosephosphate isomerase Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDM601_2290 rpe; ribulose-phosphate 3-epimerase Rpe K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JDM601_2268 tal; transaldolase Tal K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JDM601_3758 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JDM601_3815 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JDM601_1212 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:mjd00720]
D JDM601_3758 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JDM601_3815 ppdK; pyruvate phosphate dikinase PpdK K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D JDM601_2670 pca; pyruvate carboxylase Pca K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JDM601_1212 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDM601_1050 fumC; fumarase Fum K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JDM601_0235 sdhA; succinate dehydrogenase (iron-sulfur subunit) SdhA_1 K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDM601_3145 sdhA; succinate dehydrogenase (flavoprotein subunit) SdhA K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JDM601_0234 sdhB_1; succinate dehydrogenase (iron-sulfur subunit) SdhB_1 K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDM601_3146 sdhB; succinate dehydrogenase (iron-sulfur protein subunit) SdhB K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JDM601_3143 sdhC; succinate dehydrogenase (cytochrome B-556 subunit) SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JDM601_3144 sdhD; succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JDM601_0898 sucD; succinyl-CoA synthetase (alpha chain) SucD K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JDM601_0897 sucC; succinyl-CoA synthetase (beta chain) SucC K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1452 porA; pyruvate:ferredoxin oxidoreductase PorA alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D JDM601_1453 porB; pyruvate:ferredoxin oxidoreductase PorB beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D JDM601_3187 icd2; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JDM601_2082 acn; aconitate hydratase Acn K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JDM601_2239 acn; aconitate hydratase Acn K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D JDM601_2934 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM601_4181 acyl-CoA transferase/carnitine dehydratase K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3]
D JDM601_1325 gloA_1; glyoxalase GloA_1 K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JDM601_2221 mutB; methylmalonyl-CoA mutase large subunit MutB K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_2222 mutA; methylmalonyl-CoA mutase small subunit MutA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_0712 mcmA2a; methylmalonyl-CoA mutase beta subunit McmA2a K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDM601_0713 mcmA2b; methylmalonyl-CoA mutase alpha subunit McmA2b K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JDM601_3194 folD; bifunctional protein: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JDM601_3028 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM601_3027 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM601_3945 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:mjd00680]
D JDM601_0149 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_3610 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_0277 formate dehydrogenase beta subunit selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JDM601_0278 formate dehydrogenase alpha subunit selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D JDM601_0276 hybA; Fe-S-cluster-containing hydrogenase HybA K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D JDM601_1039 glyA; serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM601_0988 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM601_1212 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDM601_0357 fba; fructose-bisphosphate aldolase Fba K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JDM601_1051 glpX; fructose 16-bisphosphatase GlpX K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JDM601_0646 pfkA_1; 6-phosphofructokinase PfkA_1 K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_2732 pfkA; 6-phosphofructokinase PfkA K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JDM601_3027 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
D JDM601_3028 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM601_3945 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDM601_0477 gpmA; phosphoglycerate mutase 1 Gpm1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM601_2718 serA1; D-3-phosphoglycerate dehydrogenase SerA1 K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDM601_0810 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JDM601_2770 serB2; phosphoserine phosphatase SerB2 K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JDM601_1161 fbiC; F420 biosynthesis protein FbiC K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32]
D JDM601_2686 conserved hypothetical protein K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D JDM601_3010 fbiA; F420 biosynthesis protein FbiA K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
D JDM601_3011 fbiB; F420 biosynthesis protein FbiB K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:mjd00910]
D JDM601_0242 narK3_2; integral membrane nitrite extrusion protein NarK3_2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDM601_0245 narK3; integral membrane nitrite extrusion protein NarK3 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDM601_2779 narU; integral membrane nitrite extrusion protein NarU K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDM601_1149 respiratory nitrate reductase subunit alpha narG K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_1150 narH; NarH K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_1152 respiratory nitrate reductase subunit gamma NarI K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_0239 nirB; nitrite reductase NAD(P)H large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D JDM601_0241 nirD; nitrite reductase K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D JDM601_1416 multicopper oxidase type 3 K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D JDM601_2974 nitric-oxide reductase subunit B K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D JDM601_2401 conserved hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D JDM601_2533 alanine rich oxidoreductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D JDM601_1432 gdh; NAD-dependent glutamate dehydrogenase Gdh K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D JDM601_0953 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JDM601_1678 glnA2; glutamine synthetase GlnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_1682 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2581 glnA3; glutamine synthetase GlnA3 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_4178 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_4176 gltB; ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JDM601_4175 gltD; NADH-dependent glutamate synthase (small subunit) GltD K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JDM601_0653 cynS; cyanate lyase CynS K01725 cynS; cyanate lyase [EC:4.2.1.104]
D JDM601_1278 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D JDM601_3880 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D JDM601_2462 conserved hypothetical protein
C 00920 Sulfur metabolism [PATH:mjd00920]
D JDM601_1512 subI; sulfate-binding lipoprotein SubI K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JDM601_1513 cysT; sulfate-transport integral membrane protein ABC transporter CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JDM601_1514 cysW; sulfate-transport integral membrane protein ABC transporter CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D JDM601_1515 cysA1; sulfate-transport ATP-binding protein ABC transporter CysA1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JDM601_2323 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JDM601_2322 ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein
D JDM601_2321 conserved hypothetical protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JDM601_1280 cysN; bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D JDM601_1279 cysD; sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JDM601_1281 cysQ_1; monophosphatase CysQ_1 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JDM601_1771 cysQ; monophosphatase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JDM601_2561 conserved hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D JDM601_1518 cysH; 3'-phosphoadenosine 5'-phosphosulfate reductase CysH K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D JDM601_1519 nirA_2; ferredoxin-dependent nitrite reductase NirA_2 K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D JDM601_0259 putative terminal quinol oxidase subunit I K05908 doxDA; thiosulfate dehydrogenase (quinone) [EC:1.8.5.2]
D JDM601_1560 thiosulfate sulfotransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_3043 cysA2; thiosulfate sulfurtransferase CysA2 K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_3545 cysA2; thiosulfate sulfurtransferase CysA2 K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_1668 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JDM601_1669 cysK1; cysteine synthase a CysK1 K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JDM601_3963 cysK; cysteine synthase CysK K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JDM601_3190 metX; homoserine O-acetyltransferase MetA K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D JDM601_1025 metB; cystathionine gamma-synthase MetB (cgs) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JDM601_0369 metZ; O-succinylhomoserine sulfhydrylase MetZ K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D JDM601_1602 integral membrane protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:mjd00061]
D JDM601_2934 putative acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D JDM601_3045 accA3; bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha chain AccA3 K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D JDM601_1648 accD6; acetyl/propionyl-CoA carboxylase (beta subunit) AccD6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D JDM601_1531 acyl carrier protein K02078 acpP; acyl carrier protein
D JDM601_1651 acpP; meromycolate extension acyl carrier protein AcpM K02078 acpP; acyl carrier protein
D JDM601_1652 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDM601_1383 fas; fatty acid synthase Fas K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D JDM601_0225 fabG; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3393 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3410 fabG; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3595 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3768 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_4239 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_0873 desA1_1; acyl-(acyl-carrier protein) desaturase DesA1_1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D JDM601_3526 desA1; acyl-(acyl-carrier protein) desaturase DesA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D JDM601_1040 desA2; acyl-(acyl-carrier protein) desaturase DesA2 K03922 desA2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.-]
D JDM601_1716 fadD15; long-chain-fatty-acid-CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3414 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3517 acyl-CoA synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3658 fadD4; fatty-acid-CoA ligase FadD4 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3839 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3715 short chain dehydrogenase K28220 scdG; hydroxylacyl dehydrogenase [EC:1.1.-.-]
D JDM601_3751 long-chain fatty-acid CoA ligase
D JDM601_3784 fadD4; fatty-acid-CoA ligase FadD4
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:mjd00071]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0738 fadA6_2; acetyl-CoA acetyltransferase FadA6_2 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_1117 fadA6_3; acetyl-CoA acetyltransferase FadA6_3 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_2546 ltp1; lipid-transfer protein Ltp1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3694 fadA5; acetyl-CoA acetyltransferase FadA5 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3713 fadA6_1; acetyl-CoA acetyltransferase FadA6_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3745 ltp1_1; lipid-transfer protein Ltp1_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1578 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JDM601_0253 fadE2_1; acyl-CoA dehydrogenase FadE2_1 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0703 fadE1_1; acyl-CoA dehydrogenase FadE1_1 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0735 fadE12_1; acyl-CoA dehydrogenase FadE12_1 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0739 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0870 fadE25_2; acyl-CoA dehydrogenase FadE25_2 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0929 fadE13; acyl-CoA dehydrogenase FadE13 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_2515 fadE2_1; acyl-CoA dehydrogenase FadE2_1 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_2850 fadE23; acyl-CoA dehydrogenase FadE23 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_2856 fadE12_3; acyl-CoA dehydrogenase FadE12_3 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_3210 fadE25_2; acyl-CoA dehydrogenase FadE25_2 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_4264 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_2465 fadE20; acyl-CoA dehydrogenase FadE20 K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D JDM601_2944 fadE20; acyl-CoA dehydrogenase FADE20 K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D JDM601_2943 fadE7; acyl-CoA dehydrogenase FadE7 K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JDM601_1716 fadD15; long-chain-fatty-acid-CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3414 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3517 acyl-CoA synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3658 fadD4; fatty-acid-CoA ligase FadD4 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3839 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_1532 pks16; polyketide synthase Pks16 K01909 mbtM; long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:6.2.1.20]
D JDM601_2991 alkB; transmembrane alkane 1-monooxygenase AlkB K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D JDM601_3998 alkB; transmembrane alkane 1-monooxygenase AlkB K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D JDM601_1956 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JDM601_4002 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JDM601_0149 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_3610 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_1950 adhA; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDM601_2391 adhC; NADP-dependent alcohol dehydrogenase AdhC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3751 long-chain fatty-acid CoA ligase
D JDM601_3784 fadD4; fatty-acid-CoA ligase FadD4
C 00073 Cutin, suberine and wax biosynthesis [PATH:mjd00073]
D JDM601_3214 acrA1; short-chain dehydrogenase AcrA1 K28138 acrB; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]
D JDM601_0187 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_0543 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_1423 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_2498 triacylglycerol synthase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_2969 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_2983 triacylglycerol synthase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_3647 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_4029 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
C 00074 Mycolic acid biosynthesis [PATH:mjd00074]
D JDM601_3045 accA3; bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha chain AccA3 K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D JDM601_1648 accD6; acetyl/propionyl-CoA carboxylase (beta subunit) AccD6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D JDM601_1384 acpS; phosphopantetheinyl transferase AcpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JDM601_2550 pptII; phosphopantetheinyl transferase PptII K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D JDM601_1531 acyl carrier protein K02078 acpP; acyl carrier protein
D JDM601_1651 acpP; meromycolate extension acyl carrier protein AcpM K02078 acpP; acyl carrier protein
D JDM601_1652 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDM601_1383 fas; fatty acid synthase Fas K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D JDM601_1650 kasA; 3-oxoacyl-(acyl carrier protein) synthase I K11609 kasA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase I [EC:2.3.1.293]
D JDM601_1649 kasB; 3-oxoacyl-(acyl carrier protein) synthase II K27070 kasB; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase II [EC:2.3.1.294]
D JDM601_2027 kasB; 3-oxoacyl-(acyl carrier protein) synthase II K27070 kasB; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase II [EC:2.3.1.294]
D JDM601_2232 fabG1; 3-oxoacyl-(acyl carrier protein) reductase K11610 mabA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.-]
D JDM601_0658 (3R)-hydroxyacyl-ACP dehydratase subunit HadA K27071 hadA; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadA [EC:4.2.1.-]
D JDM601_0659 (3R)-hydroxyacyl-ACP dehydratase subunit HadB K27072 hadB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadB [EC:4.2.1.-]
D JDM601_4227 (3R)-hydroxyacyl-ACP dehydratase subunit HadB K27689 hadAB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadAB [EC:4.2.1.-]
D JDM601_0660 (3R)-hydroxyacyl-ACP dehydratase subunit HadC K27073 hadC; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadC [EC:4.2.1.-]
D JDM601_0500 conserved hypothetical protein K27074 hadD; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadD [EC:4.2.1.-]
D JDM601_2231 inhA; enoyl-(acyl carrier protein) reductase K11611 inhA; meromycolic acid enoyl-[acyl-carrier protein] reductase [EC:1.3.1.118]
D JDM601_0873 desA1_1; acyl-(acyl-carrier protein) desaturase DesA1_1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D JDM601_3526 desA1; acyl-(acyl-carrier protein) desaturase DesA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D JDM601_1040 desA2; acyl-(acyl-carrier protein) desaturase DesA2 K03922 desA2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.-]
D JDM601_0665 mmaA4; methoxy mycolic acid synthase 4 MmaA4 K26592 mmaA4; hydroxy mycolic acid synthase MmaA4
D JDM601_2025 mmaA4; methoxy mycolic acid synthase 4 MmaA4 K26592 mmaA4; hydroxy mycolic acid synthase MmaA4
D JDM601_2026 mmaA5_1; methoxy mycolic acid synthase 5 MmaA5_1 K26595 mmaA2; cyclopropane mycolic acid synthase MmaA2
D JDM601_2028 mmaA1; methoxy mycolic acid synthase 1 Mma1 K26594 mmaA1; mycolic acid methyltransferase MmaA1 [EC:2.1.1.-]
D JDM601_2029 mmaA5_1; methoxy mycolic acid synthase 5 MmaA5_1 K26596 cmaA2; cyclopropane mycolic acid synthase CmaA2
D JDM601_4116 accD4_1; propionyl-CoA carboxylase beta chain 4 AccD4_1 K27093 accD4; long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.- 2.1.3.-]
D JDM601_3039 accD5; propionyl-CoA carboxylase beta chain 5 AccD5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JDM601_3040 conserved hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D JDM601_3262 fatty-acid-CoA ligase K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-]
D JDM601_4118 fadD32; fatty acyl-AMP ligase FadD32 K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-]
D JDM601_4117 pks13; polyketide synthase Pks13 K12437 pks13; polyketide synthase 13
D JDM601_1396 short-chain type dehydrogenase/reductase K27306 cmrA; mycolic acid reductase
D JDM601_1973 fbpB; secreted antigen 85-B FbpB K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_3084 fbpB; secreted antigen 85-B FbpB K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_4122 fbpA; secreted antigen 85-A FbpA K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_4182 fbpC; secreted antigen 85-C FbpC K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_3276 cut3; cutinase precursor Cut3 K27359 cut3; trehalose dimycolate hydrolase
C 00100 Steroid biosynthesis [PATH:mjd00100]
D JDM601_3604 cyp51B1; cytochrome P450 51B1 Cyp51B1 K05917 CYP51; sterol 14alpha-demethylase [EC:1.14.14.154 1.14.15.36]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:mjd00121]
D JDM601_0876 short-chain type dehydrogenase/reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:mjd00561]
D JDM601_1698 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_2777 adh; NADP-dependent alcohol dehydrogenase Adh K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D JDM601_3977 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JDM601_1848 phosphatase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D JDM601_1425 plsB2; glycerol-3-phosphate acyltransferase PlsB2 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D JDM601_1722 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDM601_1641 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JDM601_0187 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_0543 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_1423 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_2498 triacylglycerol synthase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_2969 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_2983 triacylglycerol synthase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_3647 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_4029 conserved hypothetical protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D JDM601_1973 fbpB; secreted antigen 85-B FbpB K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_3084 fbpB; secreted antigen 85-B FbpB K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_4122 fbpA; secreted antigen 85-A FbpA K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_4182 fbpC; secreted antigen 85-C FbpC K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_0151 lysophospholipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
C 00564 Glycerophospholipid metabolism [PATH:mjd00564]
D JDM601_0559 gpdA1; glycerol-3-phosphate dehydrogenase GpdA1 K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JDM601_2685 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JDM601_1644 glpD1; glycerol-3-phosphate dehydrogenase GlpD1 K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JDM601_3125 glpD2; glycerol-3-phosphate dehydrogenase GlpD2 K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JDM601_1425 plsB2; glycerol-3-phosphate acyltransferase PlsB2 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D JDM601_1722 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JDM601_1641 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D JDM601_3868 glpQ1; glycerophosphoryl diester phosphodiesterase GlpQ1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JDM601_4155 glpQ1; glycerophosphoryl diester phosphodiesterase GlpQ1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JDM601_2598 cdsA; integral membrane phosphatidate cytidylyltransferase CdsA K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JDM601_0420 pssA; CDP-diacylglycerol--serine o-phosphatidyltransferase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D JDM601_0421 psd; phosphatidylserine decarboxylase Psd K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D JDM601_2495 pgsA3; PGP synthase PgsA3 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JDM601_1917 pgsA2; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA2 K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D JDM601_1642 flavoprotein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
C 00600 Sphingolipid metabolism [PATH:mjd00600]
D JDM601_1997 ceramidase K12349 ASAH2; neutral ceramidase [EC:3.5.1.23]
D JDM601_1548 gadB; glutamate decarboxylase GadB K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:mjd00592]
D JDM601_1578 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JDM601_0738 fadA6_2; acetyl-CoA acetyltransferase FadA6_2 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_1117 fadA6_3; acetyl-CoA acetyltransferase FadA6_3 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_2546 ltp1; lipid-transfer protein Ltp1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3694 fadA5; acetyl-CoA acetyltransferase FadA5 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3713 fadA6_1; acetyl-CoA acetyltransferase FadA6_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3745 ltp1_1; lipid-transfer protein Ltp1_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:mjd01040]
D JDM601_0873 desA1_1; acyl-(acyl-carrier protein) desaturase DesA1_1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D JDM601_3526 desA1; acyl-(acyl-carrier protein) desaturase DesA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D JDM601_1040 desA2; acyl-(acyl-carrier protein) desaturase DesA2 K03922 desA2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.-]
D JDM601_0076 desA3_2; linoleoyl-CoA desaturase DesA3_2 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_0861 desA3_1; linoleoyl-CoA desaturase DesA3_1 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_1451 desA3_2; linoleoyl-CoA desaturase DesA3_2 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_2874 desA3_2; linoleoyl-CoA desaturase DesA3_2 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_2965 desA3_1; linoleoyl-CoA desaturase DesA3_1 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_0075 flavodoxin oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D JDM601_2873 flavodoxin oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D JDM601_2966 oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase
D JDM601_1578 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JDM601_0108 tesB2; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_2127 tesB1; acyl-CoA thioesterase II TesB1 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_2387 tesB2; acyl-CoA thioesterase II TesB2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_4058 tesB1; acyl-CoA thioesterase II TesB1 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_4242 tesB2; acyl-CoA thioesterase II TesB2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:mjd00230]
D JDM601_0980 prsA; ribose-phosphate pyrophosphokinase PrsA K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JDM601_3566 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JDM601_3594 purD; phosphoribosylamine-glycine ligase PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JDM601_0904 purN; 5'-phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JDM601_0367 purT; formate-dependent phosphoribosylglycinamide formyltransferase PurT K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D JDM601_3569 purL; phosphoribosylformylglycinamidine synthase II PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JDM601_3574 phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JDM601_3573 purQ; phosphoribosylformylglycinamidine synthase I PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDM601_3551 purM; 5'-phosphoribosyl-5-aminoimidazole synthetase PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JDM601_3033 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AirC) K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JDM601_3032 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (air carboxylase) (AirC) K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JDM601_3581 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase PurC K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D JDM601_3587 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JDM601_0905 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDM601_2371 apt; adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JDM601_3131 deoD; purine nucleoside phosphorylase DeoD K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JDM601_1747 yfiH; membrane protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JDM601_3215 iunH; inosine-uridine nucleoside hydrolase IunH K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1]
D JDM601_3906 hpt; hypoxanthine-guanine phosphoribosyltransferase Hpt K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D JDM601_3222 guaB3; inosine-5'-monophosphate (imp) dehydrogenase GuaB3 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JDM601_3223 guaB2; inosine-5'-monophosphate (imp) dehydrogenase GuaB2 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JDM601_1462 ndk; nucleoside diphosphate kinase NdkA K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDM601_1344 Ham1-related NTPase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JDM601_3218 guaA; GMP synthase GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JDM601_1933 guaB1; inosine-5'-monophosphate dehydrogenase GuaB1 K26110 guaB1; GMP reductase [EC:1.7.1.7]
D JDM601_1879 metal-dependent hydrolase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D JDM601_2307 gmk; guanylate kinase Gmk K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JDM601_2787 nrdE; ribonucleoside-diphosphate reductase (alpha chain) NrdE K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDM601_0215 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM601_2780 nrdF; ribonucleoside-diphosphate reductase (beta chain) NrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM601_1573 dgt; deoxyguanosine triphosphate triphosphohydrolase Dgt K01129 dgt; dGTPase [EC:3.1.5.1]
D JDM601_2370 relA; GTP pyrophosphokinase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JDM601_0491 conserved hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JDM601_0991 conserved hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JDM601_1234 cyaA; adenylate cyclase CyaA K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JDM601_2123 cya_1; membrane-anchored adenylyl cyclase Cya_1 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JDM601_2992 transmembrane protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JDM601_3930 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D JDM601_0363 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JDM601_1700 cbhK; carbohydrate kinase CbhK K00856 ADK; adenosine kinase [EC:2.7.1.20]
D JDM601_3140 add; adenosine deaminase Add K01488 add; adenosine deaminase [EC:3.5.4.4]
D JDM601_3300 adk; adenylate kinase (ATP-AMP transphosphorylase) Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D JDM601_0984 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JDM601_2396 conserved hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D JDM601_1280 cysN; bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D JDM601_1279 cysD; sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JDM601_0272 ureC; urease alpha subunit UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D JDM601_0273 ureB; urease beta subunit UreB K01429 ureB; urease subunit beta [EC:3.5.1.5]
D JDM601_0274 putative urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:mjd00240]
D JDM601_2311 carB; carbamoyl-phosphate synthase large chain CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM601_2312 carA; carbamoyl-phosphate synthase small chain CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM601_2315 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JDM601_2314 pyrC; dihydroorotase PyrC K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JDM601_1756 pyrD; dihydroorotate dehydrogenase PyrD K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D JDM601_0351 pyrE; orotate phosphoribosyltransferase PyrE K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JDM601_2310 pyrF; orotidine 5'-phosphate decarboxylase PyrF K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JDM601_2600 pyrH; uridylate kinase PyrH K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JDM601_1462 ndk; nucleoside diphosphate kinase NdkA K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDM601_0984 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JDM601_3041 nucleotide-binding protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JDM601_1855 pyrG; CTP synthase PyrG K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JDM601_1864 cmk; cytidylate kinase Cmk K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JDM601_3134 upp; uracil phosphoribosyltransferase Upp K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDM601_2316 pyrR; pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDM601_1169 conserved hypothetical protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D JDM601_3142 cdd; cytidine deaminase Cdd K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D JDM601_0322 dcd; deoxycytidine triphosphate deaminase Dcd K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D JDM601_2787 nrdE; ribonucleoside-diphosphate reductase (alpha chain) NrdE K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDM601_0215 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM601_2780 nrdF; ribonucleoside-diphosphate reductase (beta chain) NrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM601_2987 tmk; thymidylate kinase Tmk K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JDM601_2439 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase DutT K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JDM601_3141 deoA; thymidine phosphorylase DeoA K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D JDM601_2510 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JDM601_2504 thyX; thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:mjd00250]
D JDM601_2151 nadB; l-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JDM601_2186 ansA; L-asparaginase AnsA K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JDM601_1701 asnB; asparagine synthetase AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDM601_3640 asparagine synthetase-like protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDM601_0329 aspC; aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JDM601_1836 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDM601_1837 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDM601_0363 purA; adenylosuccinate synthetase PurA K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JDM601_3587 purB; adenylosuccinate lyase PurB K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JDM601_2315 pyrB; aspartate carbamoyltransferase PyrB K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JDM601_3245 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM601_2377 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JDM601_0216 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM601_3646 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM601_4176 gltB; ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JDM601_4175 gltD; NADH-dependent glutamate synthase (small subunit) GltD K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JDM601_1432 gdh; NAD-dependent glutamate dehydrogenase Gdh K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D JDM601_0953 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JDM601_1678 glnA2; glutamine synthetase GlnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_1682 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2581 glnA3; glutamine synthetase GlnA3 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_4178 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2311 carB; carbamoyl-phosphate synthase large chain CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM601_2312 carA; carbamoyl-phosphate synthase small chain CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM601_1321 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D JDM601_3573 purQ; phosphoribosylformylglycinamidine synthase I PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDM601_3251 glmS; glucosamine-fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDM601_3566 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:mjd00260]
D JDM601_3991 ask; aspartate kinase Ask K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM601_3990 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDM601_1293 thrA; homoserine dehydrogenase ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM601_1295 thrB; homoserine kinase ThrB K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JDM601_1294 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D JDM601_1039 glyA; serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM601_1698 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D JDM601_0477 gpmA; phosphoglycerate mutase 1 Gpm1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM601_2718 serA1; D-3-phosphoglycerate dehydrogenase SerA1 K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDM601_0810 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JDM601_2770 serB2; phosphoserine phosphatase SerB2 K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JDM601_1926 gcvB; glycine dehydrogenase GcvB K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JDM601_1692 gcvT; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_1921 gcvH; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D JDM601_0420 pssA; CDP-diacylglycerol--serine o-phosphatidyltransferase PssA K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D JDM601_1023 cbs; cystathionine beta-synthase CBS K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D JDM601_2169 ilvA; threonine dehydratase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JDM601_2131 trpA; tryptophan synthase alpha subunit TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JDM601_2132 trpB; tryptophan synthase beta subunit TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JDM601_2698 argD; acetylornithine aminotransferase ArgD K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D JDM601_2697 acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D JDM601_2699 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D JDM601_2700 ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
C 00270 Cysteine and methionine metabolism [PATH:mjd00270]
D JDM601_1668 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JDM601_1669 cysK1; cysteine synthase a CysK1 K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JDM601_3963 cysK; cysteine synthase CysK K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JDM601_1233 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM601_1023 cbs; cystathionine beta-synthase CBS K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D JDM601_1449 homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D JDM601_1775 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JDM601_1087 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JDM601_2302 metK; s-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JDM601_0533 pnp; 5'-methylthioadenosine phosphorylase Pnp K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D JDM601_1747 yfiH; membrane protein YfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D JDM601_2988 sahH; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JDM601_3991 ask; aspartate kinase Ask K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM601_3990 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDM601_1293 thrA; homoserine dehydrogenase ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM601_1295 thrB; homoserine kinase ThrB K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JDM601_3190 metX; homoserine O-acetyltransferase MetA K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D JDM601_1025 metB; cystathionine gamma-synthase MetB (cgs) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JDM601_3189 metC; O-acetylhomoserine sulfhydrylase MetC K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D JDM601_0369 metZ; O-succinylhomoserine sulfhydrylase MetZ K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D JDM601_1693 ilvE; branched-chain amino acid transaminase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDM601_3984 gshA; glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JDM601_1560 thiosulfate sulfotransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_3043 cysA2; thiosulfate sulfurtransferase CysA2 K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_3545 cysA2; thiosulfate sulfurtransferase CysA2 K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_1212 mdh; malate dehydrogenase Mdh K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JDM601_2718 serA1; D-3-phosphoglycerate dehydrogenase SerA1 K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDM601_0810 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:mjd00280]
D JDM601_1693 ilvE; branched-chain amino acid transaminase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDM601_1418 pdhA; pyruvate dehydrogenase E1 component (alpha subunit) PdhA K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JDM601_1419 pdhB; pyruvate dehydrogenase E1 component (beta subunit) PdhB K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JDM601_1420 pdhC; dihydrolipoamide S-acetyltransferase E2 component PdhC K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_0253 fadE2_1; acyl-CoA dehydrogenase FadE2_1 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0703 fadE1_1; acyl-CoA dehydrogenase FadE1_1 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0735 fadE12_1; acyl-CoA dehydrogenase FadE12_1 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0739 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0870 fadE25_2; acyl-CoA dehydrogenase FadE25_2 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_0929 fadE13; acyl-CoA dehydrogenase FadE13 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_2515 fadE2_1; acyl-CoA dehydrogenase FadE2_1 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_2850 fadE23; acyl-CoA dehydrogenase FadE23 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_2856 fadE12_3; acyl-CoA dehydrogenase FadE12_3 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_3210 fadE25_2; acyl-CoA dehydrogenase FadE25_2 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_4264 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JDM601_1405 fadE19; acyl-CoA dehydrogenase FadE19 K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_0738 fadA6_2; acetyl-CoA acetyltransferase FadA6_2 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_1117 fadA6_3; acetyl-CoA acetyltransferase FadA6_3 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_2546 ltp1; lipid-transfer protein Ltp1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3694 fadA5; acetyl-CoA acetyltransferase FadA5 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3713 fadA6_1; acetyl-CoA acetyltransferase FadA6_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3745 ltp1_1; lipid-transfer protein Ltp1_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3045 accA3; bifunctional protein acetyl-/propionyl-coenzyme A carboxylase alpha chain AccA3 K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
D JDM601_3039 accD5; propionyl-CoA carboxylase beta chain 5 AccD5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JDM601_3040 conserved hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit
D JDM601_1648 accD6; acetyl/propionyl-CoA carboxylase (beta subunit) AccD6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D JDM601_1325 gloA_1; glyoxalase GloA_1 K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D JDM601_2221 mutB; methylmalonyl-CoA mutase large subunit MutB K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_2222 mutA; methylmalonyl-CoA mutase small subunit MutA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_0713 mcmA2b; methylmalonyl-CoA mutase alpha subunit McmA2b K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2]
D JDM601_0712 mcmA2a; methylmalonyl-CoA mutase beta subunit McmA2a K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2]
D JDM601_3293 mmsB; 3-hydroxyisobutyrate dehydrogenase MmsB K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JDM601_3495 mmsB; 3-hydroxyisobutyrate dehydrogenase MmsB K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JDM601_3291 mmsA; methylmalonate semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_2377 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JDM601_1404 accA1; acetyl-/propionyl-coenzyme A carboxylase alpha chain AccA1 K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D JDM601_1403 accD1; acetyl-/propionyl-CoA carboxylase (beta subunit) AccD1 K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D JDM601_2854 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JDM601_1401 scoA; succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JDM601_2947 scoA; succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JDM601_1402 scoB; succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JDM601_2945 scoB; succinyl-CoA:3-ketoacid-coenzyme A transferase (beta subunit) ScoB K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3754 echA7; enoyl-CoA hydratase EchA7
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:mjd00290]
D JDM601_2169 ilvA; threonine dehydratase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JDM601_2691 leuC; 3-isopropylmalate dehydratase (large subunit) LeuC K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JDM601_2690 leuD; 3-isopropylmalate dehydratase (small subunit) LeuD K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JDM601_2717 leuB; 3-isopropylmalate dehydrogenase LeuB K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D JDM601_0734 ilvG; acetolactate synthase IlvG K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_1629 ilvX; acetohydroxyacid synthase IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_2722 ilvB1; acetolactate synthase (large subunit) IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_2721 ilvH; acetolactate synthase (small subunit) IlvN K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JDM601_2720 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JDM601_0156 ilvD; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JDM601_1693 ilvE; branched-chain amino acid transaminase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDM601_0329 aspC; aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JDM601_3993 leuA; 2-isopropylmalate synthase LeuA K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:mjd00300]
D JDM601_1293 thrA; homoserine dehydrogenase ThrA K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JDM601_3991 ask; aspartate kinase Ask K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM601_3990 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDM601_2362 dapA_1; dihydrodipicolinate synthase DapA_1 K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDM601_2503 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDM601_1616 conserved hypothetical protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JDM601_2526 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JDM601_1177 transferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D JDM601_1833 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JDM601_0782 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D JDM601_1178 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JDM601_2468 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JDM601_1292 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JDM601_1738 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-26-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDM601_1739 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-26-diaminopimelate-D-alanyl-D-alanyl ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:mjd00310]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_2943 fadE7; acyl-CoA dehydrogenase FadE7 K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_2377 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JDM601_0216 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM601_3646 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:mjd00220]
D JDM601_1834 argF; ornithine carbamoyltransferase anabolic ArgF K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JDM601_1836 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDM601_1837 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDM601_2661 urea amidolyase-related protein K01941 uca; urea carboxylase [EC:6.3.4.6]
D JDM601_0272 ureC; urease alpha subunit UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D JDM601_0273 ureB; urease beta subunit UreB K01429 ureB; urease subunit beta [EC:3.5.1.5]
D JDM601_0274 putative urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D JDM601_1321 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D JDM601_3573 purQ; phosphoribosylformylglycinamidine synthase I PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDM601_1678 glnA2; glutamine synthetase GlnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_1682 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2581 glnA3; glutamine synthetase GlnA3 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_4178 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2311 carB; carbamoyl-phosphate synthase large chain CarB K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JDM601_2312 carA; carbamoyl-phosphate synthase small chain CarA K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JDM601_1432 gdh; NAD-dependent glutamate dehydrogenase Gdh K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D JDM601_0953 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JDM601_0329 aspC; aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JDM601_2496 N-acetylglutamate synthase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D JDM601_1831 argJ; glutamate N-acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D JDM601_0402 conserved hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D JDM601_1832 argB; acetylglutamate kinase ArgB K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D JDM601_1830 argC; N-acetyl-gamma-glutamyl-phosphate reductase ArgC K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D JDM601_1833 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:mjd00330]
D JDM601_3087 conserved hypothetical protein K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0485 amiB2; amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_1562 amiA2; amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_2609 amiC; amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_0495 proC; pyrroline-5-carboxylate reductase ProC K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JDM601_1468 proB; glutamate 5-kinase protein ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JDM601_1481 proA; gamma-glutamyl phosphate reductase protein ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:mjd00340]
D JDM601_1778 hisG; ATP phosphoribosyltransferase HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JDM601_1777 hisE; phosphoribosyl-AMP pyrophosphatase HisE K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D JDM601_2140 hisI; phosphoribosyl-AMP 16 cyclohydrolase HisI K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D JDM601_2143 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D JDM601_2144 hisH; amidotransferase HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JDM601_2141 hisF; cyclase HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JDM601_2145 hisB; imidazole glycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D JDM601_2146 hisC1; histidinol-phosphate aminotransferase HisC1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_4050 hisC2; histidinol-phosphate aminotransferase HisC2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_2848 monophosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D JDM601_2147 hisD; histidinol dehydrogenase HisD K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3981 s-adenosyl-L-methionine-dependentmethyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
D JDM601_3983 conserved hypothetical protein K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50]
D JDM601_3982 conserved hypothetical protein K07008 egtC; gamma-glutamyl hercynylcysteine S-oxide hydrolase [EC:3.5.1.118]
D JDM601_3980 csdB; selenocysteine lyase CsdB K18913 egtE; hercynylcysteine S-oxide lyase [EC:4.4.1.36]
C 00350 Tyrosine metabolism [PATH:mjd00350]
D JDM601_2146 hisC1; histidinol-phosphate aminotransferase HisC1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_4050 hisC2; histidinol-phosphate aminotransferase HisC2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_2851 oxidoreductase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D JDM601_1858 O-methyltransferase K00545 COMT; catechol O-methyltransferase [EC:2.1.1.6]
D JDM601_0412 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_3511 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_4201 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_4240 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_0149 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_3610 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_1950 adhA; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDM601_2391 adhC; NADP-dependent alcohol dehydrogenase AdhC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM601_0113 HpcH/HpaI K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D JDM601_0216 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM601_3646 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:mjd00360]
D JDM601_0412 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_3511 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_4201 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_4240 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_2640 echA8; enoyl-CoA hydratase EchA8 K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D JDM601_3399 echA10_1; enoyl-CoA hydratase EchA10_1 K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0459 fadB2; 3-hydroxybutyryl-CoA dehydrogenase FadB2 K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDM601_2146 hisC1; histidinol-phosphate aminotransferase HisC1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_4050 hisC2; histidinol-phosphate aminotransferase HisC2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_2811 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D JDM601_0485 amiB2; amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_1562 amiA2; amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_2609 amiC; amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_1956 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JDM601_4002 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JDM601_1131 FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D JDM601_3458 flavin-type monooxygenase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D JDM601_3457 mhpB; extradiol dioxygenase MhpB K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16]
D JDM601_3459 bphD_1; 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate hydrolase BphD_1 K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D JDM601_3489 hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D JDM601_3681 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D JDM601_3679 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D JDM601_3680 mhpF_1; acetaldehyde dehydrogenase MhpF_1 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:mjd00380]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_2943 fadE7; acyl-CoA dehydrogenase FadE7 K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0485 amiB2; amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_1562 amiA2; amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_2609 amiC; amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_3050 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D JDM601_3987 katE; catalase KatE K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:mjd00400]
D JDM601_1725 aroG; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JDM601_2333 aroB; 3-dehydroquinate synthase AroB K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JDM601_2331 aroD; 3-dehydroquinate dehydratase AroD K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D JDM601_2334 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JDM601_2963 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JDM601_2335 aroF; chorismate synthase AroF K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JDM601_2135 trpE; anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDM601_2143 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D JDM601_2133 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D JDM601_2131 trpA; tryptophan synthase alpha subunit TrpA K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JDM601_2132 trpB; tryptophan synthase beta subunit TrpB K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JDM601_0419 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D JDM601_0893 conserved hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D JDM601_4036 tyrA; prephenate dehydrogenase TyrA K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JDM601_4148 pheA; prephenate dehydratase PheA K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D JDM601_2146 hisC1; histidinol-phosphate aminotransferase HisC1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_4050 hisC2; histidinol-phosphate aminotransferase HisC2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:mjd00410]
D JDM601_3890 panD; aspartate 1-decarboxylase precursor PanD K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JDM601_3245 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM601_2377 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3891 panC; pantoate-beta-alanine ligase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_1578 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JDM601_3291 mmsA; methylmalonate semialdehyde dehydrogenase MmsA K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:mjd00430]
D JDM601_3245 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM601_1432 gdh; NAD-dependent glutamate dehydrogenase Gdh K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D JDM601_3028 pta; phosphate acetyltransferase Pta K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JDM601_3027 ackA; acetate kinase AckA K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:mjd00450]
D JDM601_1025 metB; cystathionine gamma-synthase MetB (cgs) K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JDM601_1233 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM601_1775 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JDM601_1087 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JDM601_2251 csd; cysteine desulfurase Csd K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JDM601_2244 trxB1; thioredoxin TrxB1 K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JDM601_4337 trxB2; thioredoxin reductase TrxB2 K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JDM601_1280 cysN; bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D JDM601_1279 cysD; sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JDM601_0268 thiamine-monophosphate kinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JDM601_0267 selA; selenocysteine synthase SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D JDM601_0963 metS; methionyl-tRNA synthetase MetS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:mjd00460]
D JDM601_2186 ansA; L-asparaginase AnsA K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D JDM601_1039 glyA; serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:mjd00470]
D JDM601_3243 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D JDM601_2684 ddl; d-alanine--D-alanine ligase DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDM601_1321 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D JDM601_3573 purQ; phosphoribosylformylglycinamidine synthase I PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JDM601_1341 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3]
D JDM601_1741 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDM601_2468 dapF; diaminopimelate epimerase DapF K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JDM601_1292 lysA; diaminopimelate decarboxylase LysA K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JDM601_2811 D-amino-acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:mjd00480]
D JDM601_0251 oplA; 5-oxoprolinase K01469 OPLAH; 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
D JDM601_0407 carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D JDM601_3984 gshA; glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D JDM601_1690 pepB; leucyl aminopeptidase PepB K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JDM601_1441 pepN; aminopeptidase N PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JDM601_3187 icd2; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JDM601_1938 gnd1; 6-phosphogluconate dehydrogenase Gnd1 K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDM601_1978 gnd2; 6-phosphogluconate dehydrogenase decarboxylating Gnd2 K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JDM601_1977 zwf1; glucose-6-phosphate 1-dehydrogenase Zwf1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM601_2269 zwf2; glucose-6-phosphate 1-dehydrogenase Zwf2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM601_3579 glutathione K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mjd00520]
D JDM601_0981 glmU; UDP-N-acetylglucosamine pyrophosphorylase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JDM601_1313 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM601_0471 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JDM601_0220 lpqI; lipoprotein LpqI K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JDM601_3155 nagA; N-acetylglucosamine-6-phosphate deacetylase NagA K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JDM601_3267 glmM; phosphomannomutase MrsA K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JDM601_3251 glmS; glucosamine-fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDM601_0892 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM601_3004 manA; mannose-6-phosphate isomerase ManA K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JDM601_0673 carbohydrate kinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM601_2443 ppgK; polyphosphate glucokinase PpgK K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D JDM601_0941 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM601_0567 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6]
D JDM601_0566 galT; galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JDM601_0498 galE2; UDP-glucose 4-epimerase GalE2 K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM601_3920 galE1; UDP-glucose 4-epimerase GalE1 K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JDM601_4127 glf; UDP-galactopyranose mutase Glf K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D JDM601_3006 manB; phosphomannomutase PmmA K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JDM601_3133 pmmB; phosphomannomutase PmmB K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JDM601_3015 manB; d-alpha-D-mannose-1-phosphate guanylyltransferase ManB K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JDM601_1188 glgC; glucose-1-phosphate adenylyltransferase GlgC K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D JDM601_0327 rmlA; alpha-D-glucose-1-phosphate thymidylyl-transferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:mjd00541]
D JDM601_0981 glmU; UDP-N-acetylglucosamine pyrophosphorylase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JDM601_0941 galU; UTP-glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JDM601_0327 rmlA; alpha-D-glucose-1-phosphate thymidylyl-transferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDM601_3287 rmlB; dTDP-glucose-46-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDM601_3288 rmlC; dTDP-4-dehydrorhamnose 35-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDM601_3017 rmlD; dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D JDM601_3015 manB; d-alpha-D-mannose-1-phosphate guanylyltransferase ManB K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:mjd00515]
D JDM601_0957 conserved hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:mjd00514]
D JDM601_0957 conserved hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:mjd00542]
D JDM601_1301 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00550 Peptidoglycan biosynthesis [PATH:mjd00550]
D JDM601_1313 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM601_0471 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JDM601_1744 murC; UDP-N-acetylmuramate-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JDM601_1741 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDM601_1738 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-26-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDM601_2684 ddl; d-alanine--D-alanine ligase DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDM601_1739 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-26-diaminopimelate-D-alanyl-D-alanyl ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JDM601_1767 transmembrane protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM601_1740 mraY; phospho-N-acetylmuramoyl-pentappeptidetransferase MurX K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDM601_1743 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol-N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JDM601_0018 rodA; cell division protein RodA K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_1742 ftsW; FtsW-like protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_1737 pbpB; penicillin-binding membrane protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JDM601_0017 pbpA; penicillin-binding protein PbpA K05364 pbpA; penicillin-binding protein A
D JDM601_2633 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM601_3152 dacC; penicillin-binding protein DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM601_3909 dacB1; D-alanyl-D-alanine carboxypeptidase DacB1 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JDM601_3995 UDP-N-acetylmuramyl tripeptide synthase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D JDM601_3996 cobQ2; cobyric acid synthase CobQ2 K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:mjd00552]
D JDM601_1767 transmembrane protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM601_1301 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:mjd00572]
D JDM601_1301 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDM601_3016 wbbL1; dTDP-rha:A-D-GlcNAc-diphosphoryl polyprenol A-3-L-rhamnosyl transferase WbbL1 K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D JDM601_4082 L-rhamnosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D JDM601_4126 glfT; bifunctional UDP-galactofuranosyl transferase GlfT K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D JDM601_4101 transmembrane protein K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D JDM601_4123 transmembrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D JDM601_2419 transmembrane protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D JDM601_4104 embA; integral membrane indolylacetylinositol arabinosyltransferase EmbA K11385 embA; arabinosyltransferase A [EC:2.4.2.-]
D JDM601_4105 embB; integral membrane indolylacetylinositol arabinosyltransferase EmbB K11386 embB; arabinosyltransferase B [EC:2.4.2.-]
D JDM601_0218 transmembrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D JDM601_3018 conserved hypothetical protein K27775 lcp1; cell wall biosynthesis protein
D JDM601_1973 fbpB; secreted antigen 85-B FbpB K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_3084 fbpB; secreted antigen 85-B FbpB K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_4122 fbpA; secreted antigen 85-A FbpA K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_4182 fbpC; secreted antigen 85-C FbpC K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-]
D JDM601_4079 transmembrane protein K22902 K22902; D-galactosaminyltransferase
C 00543 Exopolysaccharide biosynthesis [PATH:mjd00543]
D JDM601_1301 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDM601_1668 cysE; serine acetyltransferase CysE K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:mjd00730]
D JDM601_0395 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D JDM601_0394 thiD; phosphomethylpyrimidine kinase ThiD K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D JDM601_2742 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM601_0386 thiO; thiamine biosynthesis oxidoreductase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D JDM601_2427 dxs1; 1-deoxy-D-xylulose 5-phosphate synthase Dxs1 K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JDM601_0388 thiG; thiamin biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D JDM601_0385 thiE; thiamine-phosphate pyrophosphorylase ThiE K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D JDM601_2682 thiL; thiamine-monophosphate kinase ThiL K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D JDM601_2964 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JDM601_3300 adk; adenylate kinase (ATP-AMP transphosphorylase) Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D JDM601_2729 tena/thi-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:mjd00740]
D JDM601_2285 ribA2; riboflavin biosynthesis protein RibA2 K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JDM601_2289 ribG; bifunctional riboflavin biosynthesis protein RibG K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JDM601_2284 ribH; riboflavin synthase beta chain RibH K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JDM601_2286 ribC; riboflavin synthase alpha chain RibC K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JDM601_2538 ribF; bifunctional fad synthetase/riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JDM601_0303 oxidoreductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
C 00750 Vitamin B6 metabolism [PATH:mjd00750]
D JDM601_0814 pdxH; pyridoxamine 5'-phosphate oxidase PdxH K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D JDM601_1706 pdxH; pyridoxamine 5'-phosphate oxidase PdxH K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D JDM601_0810 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JDM601_1294 thrC; threonine synthase ThrC K01733 thrC; threonine synthase [EC:4.2.3.1]
D JDM601_2388 snzP; pyridoxine biosynthesis protein SnzP K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D JDM601_2386 snoP; glutamine amidotransferase SnoP K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:mjd00760]
D JDM601_2151 nadB; l-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JDM601_2152 nadA; quinolinate synthetase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D JDM601_2150 nadC; nicotinate-nucleotide pyrophosphatase NadC K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D JDM601_1336 pncB; nicotinic acid phosphoribosyltransferase PncB K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JDM601_3131 deoD; purine nucleoside phosphorylase DeoD K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JDM601_1487 nadD; nicotinate-nucleotide adenylyltransferase NadD K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JDM601_0984 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JDM601_2914 nudC; NADH pyrophosphatase NudC K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D JDM601_1476 nadE; glutamine-dependent NAD(+) synthetase NadE K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D JDM601_2094 pncA; pyrazinamidase/nicotinamidase PncA K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D JDM601_1137 transcriptional regulatory protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D JDM601_1851 ppnK; inorganic polyphosphate/ATP-NAD kinase PpnK K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JDM601_3589 pntAa; NAD(P) transhydrogenase (subunit alpha) PntAa K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D JDM601_3588 pntB; NAD(P) transhydrogenase (subunit beta) PntB K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D JDM601_2704 maleate cis-trans isomerase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D JDM601_0216 gabD1; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JDM601_3646 gabD2; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:mjd00770]
D JDM601_0734 ilvG; acetolactate synthase IlvG K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_1629 ilvX; acetohydroxyacid synthase IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_2722 ilvB1; acetolactate synthase (large subunit) IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JDM601_2721 ilvH; acetolactate synthase (small subunit) IlvN K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JDM601_2720 ilvC; ketol-acid reductoisomerase IlvC K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JDM601_0156 ilvD; dihydroxy-acid dehydratase IlvD K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JDM601_1675 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D JDM601_1409 apbA; ketopantoate reductase ApbA K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D JDM601_3891 panC; pantoate-beta-alanine ligase PanC K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JDM601_1037 coaA; pantothenate kinase CoaA K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D JDM601_3889 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D JDM601_2305 dfp; DNA/pantothenate metabolism flavoprotein Dfp K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JDM601_0984 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D JDM601_2668 coaD; phosphopantetheine adenylyltransferase KdtB K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JDM601_1806 coaE; dephospho-CoA kinase CoaE K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JDM601_1384 acpS; phosphopantetheinyl transferase AcpS K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JDM601_1693 ilvE; branched-chain amino acid transaminase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDM601_3890 panD; aspartate 1-decarboxylase precursor PanD K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:mjd00780]
D JDM601_0225 fabG; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3393 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3410 fabG; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3595 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3768 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_4239 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_2162 bioF1; 8-amino-7-oxononanoate synthase BioF1 K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D JDM601_2163 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D JDM601_2161 bioD; dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D JDM601_2157 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D JDM601_3036 birA; bifunctional protein BirA biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:mjd00785]
D JDM601_1686 lipB; lipoate biosynthesis protein B LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D JDM601_1685 lipA; lipoate biosynthesis protein a LipA K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_1654 aceE; pyruvate dehydrogenase E1 component AceE K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JDM601_1688 sucB; pyruvate dehydrogenase (E2 component) SucB K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JDM601_1216 kgd; alpha-ketoglutarate decarboxylase Kgd K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JDM601_1418 pdhA; pyruvate dehydrogenase E1 component (alpha subunit) PdhA K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JDM601_1419 pdhB; pyruvate dehydrogenase E1 component (beta subunit) PdhB K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JDM601_1420 pdhC; dihydrolipoamide S-acetyltransferase E2 component PdhC K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JDM601_1926 gcvB; glycine dehydrogenase GcvB K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JDM601_1692 gcvT; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JDM601_1921 gcvH; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:mjd00790]
D JDM601_2460 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D JDM601_3898 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D JDM601_3896 folB; dihydroneopterin aldolase FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D JDM601_3895 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JDM601_1182 folP2; dihydropteroate synthase 2 FolP2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JDM601_3897 folP1; dihydropteroate synthase 1 FolP1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JDM601_2509 dfrA; dihydrofolate reductase DfrA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JDM601_1460 folC; folylpolyglutamate synthase protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JDM601_2285 ribA2; riboflavin biosynthesis protein RibA2 K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JDM601_0015 trpG; anthranilate synthase component II TrpG K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D JDM601_0958 pabD; para-aminobenzoate synthase component PabD K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D JDM601_3548 pabC; amino acid aminotransferase PabC K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D JDM601_1146 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JDM601_0797 moaA; molybdenum cofactor biosynthesis protein A2 MoaA2 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JDM601_0792 moaC2; molybdenum cofactor biosynthesis protein C 2 MoaC2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JDM601_0794 moaE2; molybdenum cofactor biosynthesis protein E2 MoaE2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JDM601_0422 moeA2; molybdopterin biosynthesis protein MoeA2 K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JDM601_0942 moeA1; molybdopterin biosynthesis protein MoeA1 K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D JDM601_1454 mobA; molybdopterin-guanine dinucleotide biosynthesis protein a MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:mjd00670]
D JDM601_2509 dfrA; dihydrofolate reductase DfrA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JDM601_3194 folD; bifunctional protein: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JDM601_1039 glyA; serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM601_0904 purN; 5'-phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JDM601_0905 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDM601_1692 gcvT; aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JDM601_1775 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D JDM601_2510 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JDM601_2504 thyX; thymidylate synthase ThyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D JDM601_2660 purU; formyltetrahydrofolate deformylase PurU K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JDM601_0940 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D JDM601_1449 homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D JDM601_2302 metK; s-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JDM601_2988 sahH; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JDM601_1926 gcvB; glycine dehydrogenase GcvB K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_1921 gcvH; glycine cleavage system H protein GcvH K02437 gcvH; glycine cleavage system H protein
D JDM601_1023 cbs; cystathionine beta-synthase CBS K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:mjd00860]
D JDM601_2694 gltX; glutamyl-tRNA synthetase GltS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDM601_0504 hemA; glutamyl-tRNA reductase HemA K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D JDM601_0522 hemL; glutamate-1-semialdehyde 21-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JDM601_0507 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JDM601_0505 hemC; porphobilinogen deaminase HemC K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D JDM601_0240 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D JDM601_2424 hemE; uroporphyrinogen decarboxylase HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D JDM601_2423 hemY; protoporphyrinogen oxidase HemY K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D JDM601_2230 hemH; ferrochelatase HemZ K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D JDM601_2422 conserved hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D JDM601_0506 hemD; uroporphyrin-III C-methyltransferase HemD K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D JDM601_2571 cysG; multifunctional enzyme siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D JDM601_2265 ctaB; cytochrome C oxidase assembly factor CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D JDM601_2260 antibiotic ABC transporter transmembrane protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JDM601_3164 cobI; bifunctional protein: CobI-CobJ fusion protein K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D JDM601_3162 cobalamin biosynthesis protein K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D JDM601_3165 cobM; precorrin-4 C11-methyltransferase CobM K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D JDM601_3179 precorrin 6A synthase K02228 cobF; precorrin-6A synthase [EC:2.1.1.152]
D JDM601_3176 cobK; precorrin-6x reductase CobK K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D JDM601_3166 cobL; precorrin-6y methyltransferase CobL K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D JDM601_3163 cobH; precorrin-8x methylmutase CobH K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D JDM601_3169 cobB; cobyrinic acid aC-diamide synthase CobB K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D JDM601_3180 cobN; cobalamin biosynthesis protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D JDM601_1312 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JDM601_3168 cobO; cob(I)alamin adenosyltransferase CobO K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JDM601_3178 cobQ1; cobyric acid synthase CobQ1 K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D JDM601_3170 cobD; cobalamin biosynthesis transmembrane protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D JDM601_0433 cobU; bifunctional cobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D JDM601_1695 cobS; cobalamin 5'-phosphate synthase CobS K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D JDM601_1696 cobT; nicotinate-nucleotide-dimethylbenzimidazol phosphoribosyltransferase CobT K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D JDM601_1666 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D JDM601_3167 magnesium chelatase K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D JDM601_0909 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D JDM601_2111 conserved hypothetical protein K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-]
D JDM601_1967 bfrA; bacterioferritin BfrA K03594 bfr; bacterioferritin [EC:1.16.3.1]
D JDM601_4154 bfrB; bacterioferritin BfrB K22336 bfrB; bacterioferritin B [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mjd00130]
D JDM601_0552 ubiE; ubiquinone/menaquinone methyltransferase MenH K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JDM601_2930 entC; isochorismate synthase EntC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D JDM601_0549 menD; bifunctional 2-succinyl-6-hydroxy-24-cyclohexadiene-1-carboxylate synthase MenD K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D JDM601_0545 menC; muconate cycloisomerase MenC K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D JDM601_0535 menE; O-succinylbenzoic acid-CoA ligase MenE K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D JDM601_0541 menB; naphthoate synthase MenB K01661 menB; naphthoate synthase [EC:4.1.3.36]
D JDM601_1942 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D JDM601_0531 menA; 14-dihydroxy-2-naphthoate octaprenyltransferase MenA K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JDM601_0213 flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:mjd00900]
D JDM601_2427 dxs1; 1-deoxy-D-xylulose 5-phosphate synthase Dxs1 K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JDM601_2590 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JDM601_3874 ispD; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase IspD K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D JDM601_0969 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JDM601_3873 ispF; 2C-methyl-D-erythritol 24-cyclodiphosphate synthase IspF K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D JDM601_2588 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JDM601_1060 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1729 idsA2; geranylgeranyl pyrophosphate synthetase IdsA2 K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JDM601_1033 uppS; short (C15) chain Z-isoprenyl diphosphate synthase UppS K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D JDM601_1566 long (C50) chain Z-isoprenyl diphosphate synthase K14215 E2.5.1.86; trans,polycis-decaprenyl diphosphate synthase [EC:2.5.1.86]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:mjd00903]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3901 monooxygenase K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107]
D JDM601_2488 conserved hypothetical protein K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8]
C 00907 Pinene, camphor and geraniol degradation [PATH:mjd00907]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_2079 iron-regulated short-chain dehydrogenase/reductase K13775 atuG; citronellol/citronellal dehydrogenase
D JDM601_2949 iron-regulated short-chain dehydrogenase/reductase K13775 atuG; citronellol/citronellal dehydrogenase
D JDM601_3764 acyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D JDM601_2854 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JDM601_0738 fadA6_2; acetyl-CoA acetyltransferase FadA6_2 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_1117 fadA6_3; acetyl-CoA acetyltransferase FadA6_3 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_2546 ltp1; lipid-transfer protein Ltp1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3694 fadA5; acetyl-CoA acetyltransferase FadA5 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3713 fadA6_1; acetyl-CoA acetyltransferase FadA6_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3745 ltp1_1; lipid-transfer protein Ltp1_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JDM601_2267 tkt; transketolase Tkt K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics [PATH:mjd01059]
D JDM601_4210 hydrolase K21159 sgcF; epoxide hydrolase
D JDM601_1527 ppsD; phenolpthiocerol synthesis type-I polyketide synthase PpsD K15320 ATX; 6-methylsalicylic acid synthase [EC:2.3.1.165]
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:mjd00523]
D JDM601_0327 rmlA; alpha-D-glucose-1-phosphate thymidylyl-transferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDM601_3287 rmlB; dTDP-glucose-46-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDM601_3288 rmlC; dTDP-4-dehydrorhamnose 35-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDM601_3017 rmlD; dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:mjd01053]
D JDM601_2930 entC; isochorismate synthase EntC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D JDM601_2550 pptII; phosphopantetheinyl transferase PptII K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D JDM601_1528 mbtA; bifunctional enzyme MbtA: salicyl-AMP ligase (SAL-AMP ligase) + salicyl-S-ACP synthetase K04787 mbtA; mycobactin salicyl-AMP ligase [EC:6.3.2.-]
D JDM601_1529 mbtB; phenyloxazoline synthase MbtB K04788 mbtB; mycobactin phenyloxazoline synthetase
D JDM601_1542 mbtE; non-ribosomal peptide synthetase MbtE K04789 mbtE; mycobactin peptide synthetase MbtE
D JDM601_1540 mbtC; polyketide synthase MbtC K04790 mbtC; mycobactin polyketide synthetase MbtC
D JDM601_1541 mbtD; polyketide synthase MbtD K04791 mbtD; mycobactin polyketide synthetase MbtD
D JDM601_1543 mbtF; non-ribosomal peptide synthetase MbtF K04792 mbtF; mycobactin peptide synthetase MbtF
D JDM601_1544 mbtG; lysine-N-oxygenase MbtG K04793 mbtG; mycobactin lysine-N-oxygenase
C 01055 Biosynthesis of vancomycin group antibiotics
D JDM601_3287 rmlB; dTDP-glucose-46-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
D JDM601_0190 nat; arylamine N-acetyltransferase Nat K00622 nat; arylamine N-acetyltransferase [EC:2.3.1.5]
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:mjd00332]
D JDM601_1468 proB; glutamate 5-kinase protein ProB K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JDM601_1481 proA; gamma-glutamyl phosphate reductase protein ProA K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:mjd00261]
D JDM601_1545 MbtH-like protein K05375 mbtH; MbtH protein
D JDM601_1280 cysN; bifunctional enzyme CysN/CysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D JDM601_1279 cysD; sulfate adenylyltransferase subunit 2 CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JDM601_3991 ask; aspartate kinase Ask K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JDM601_3990 asd; aspartate-semialdehyde dehydrogenase Asd K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D JDM601_2362 dapA_1; dihydrodipicolinate synthase DapA_1 K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDM601_2503 dapA; dihydrodipicolinate synthase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JDM601_1616 conserved hypothetical protein K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JDM601_2526 dapB; dihydrodipicolinate reductase DapB K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:mjd00521]
D JDM601_0673 carbohydrate kinase K25026 glk; glucokinase [EC:2.7.1.2]
D JDM601_4315 ino1; myo-inositol-1-phosphate synthase Ino1 K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D JDM601_0231 suhB; extragenic suppressor protein SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDM601_2142 impA; inositol-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JDM601_0327 rmlA; alpha-D-glucose-1-phosphate thymidylyl-transferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDM601_3287 rmlB; dTDP-glucose-46-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JDM601_3288 rmlC; dTDP-4-dehydrorhamnose 35-epimerase RmlC K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D JDM601_3017 rmlD; dTDP-6-deoxy-L-lyxo-4-hexulose reductase RmlD K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JDM601_0673 carbohydrate kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:mjd00525]
D JDM601_0327 rmlA; alpha-D-glucose-1-phosphate thymidylyl-transferase RmlA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JDM601_3287 rmlB; dTDP-glucose-46-dehydratase RmlB K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:mjd00401]
D JDM601_4036 tyrA; prephenate dehydrogenase TyrA K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JDM601_2146 hisC1; histidinol-phosphate aminotransferase HisC1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_4050 hisC2; histidinol-phosphate aminotransferase HisC2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D JDM601_2135 trpE; anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D JDM601_1652 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDM601_0225 fabG; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3393 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3410 fabG; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3595 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3768 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_4239 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JDM601_1531 acyl carrier protein K02078 acpP; acyl carrier protein
D JDM601_1651 acpP; meromycolate extension acyl carrier protein AcpM K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D JDM601_2302 metK; s-adenosylmethionine synthetase MetK K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D JDM601_1729 idsA2; geranylgeranyl pyrophosphate synthetase IdsA2 K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:mjd00362]
D JDM601_2716 pip; proline iminopeptidase Pip K14727 pcaL; 3-oxoadipate enol-lactonase / 4-carboxymuconolactone decarboxylase [EC:3.1.1.24 4.1.1.44]
D JDM601_0738 fadA6_2; acetyl-CoA acetyltransferase FadA6_2 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_1117 fadA6_3; acetyl-CoA acetyltransferase FadA6_3 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_2546 ltp1; lipid-transfer protein Ltp1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3694 fadA5; acetyl-CoA acetyltransferase FadA5 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3713 fadA6_1; acetyl-CoA acetyltransferase FadA6_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3745 ltp1_1; lipid-transfer protein Ltp1_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3681 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D JDM601_3679 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D JDM601_3680 mhpF_1; acetaldehyde dehydrogenase MhpF_1 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D JDM601_2714 protocatechuate 34-dioxygenase alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D JDM601_2713 protocatechuate 34-dioxygenase beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D JDM601_2715 3-carboxy-ciscis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D JDM601_0414 conserved hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D JDM601_3232 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D JDM601_3387 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D JDM601_3502 conserved hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D JDM601_3597 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D JDM601_1956 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JDM601_4002 ferredoxin reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JDM601_2942 dehydrogenase/reductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D JDM601_3480 3-oxoacyl-(acyl carrier protein) reductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D JDM601_3557 3-oxoacyl-(acyl carrier protein) reductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-]
D JDM601_1498 fadE17_1; acyl-CoA dehydrogenase FadE17_1 K04118 pimC; pimeloyl-CoA dehydrogenase large subunit [EC:1.3.1.62]
D JDM601_0851 fadE18_2; acyl-CoA dehydrogenase FadE18_2 K28556 pimD; pimeloyl-CoA dehydrogenase small subunit [EC:1.3.1.62]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D JDM601_2943 fadE7; acyl-CoA dehydrogenase FadE7 K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0459 fadB2; 3-hydroxybutyryl-CoA dehydrogenase FadB2 K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:mjd00627]
D JDM601_4168 ethA; monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-]
D JDM601_4171 ethA; monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-]
D JDM601_0485 amiB2; amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_1562 amiA2; amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_2609 amiC; amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_2650 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D JDM601_3150 hydroxylaminobenzene mutase K01865 hab; (hydroxyamino)benzene mutase [EC:5.4.4.1]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:mjd00364]
D JDM601_2105 conserved hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D JDM601_2511 alanine rich hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:mjd00625]
D JDM601_4024 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D JDM601_1950 adhA; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDM601_2391 adhC; NADP-dependent alcohol dehydrogenase AdhC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM601_0149 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_3610 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_0095 aldehyde dehydrogenase (NAD+) dependent K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_0194 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_1113 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3365 aldA_2; aldehyde dehydrogenase NAD dependent AldA_2 K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3449 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3478 aldA; NAD-dependent aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3519 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3600 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3733 aldA; NAD-dependent aldehyde dehydrogenase AldA K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_3806 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D JDM601_4261 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:mjd00361]
D JDM601_4024 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5]
D JDM601_2105 conserved hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D JDM601_2511 alanine rich hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:mjd00623]
D JDM601_3786 echA16_1; enoyl-CoA hydratase EchA16_1 K07546 bbsH; (E)-benzylidenesuccinyl-CoA hydratase [EC:4.2.1.180]
D JDM601_2105 conserved hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D JDM601_2511 alanine rich hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:mjd00622]
D JDM601_3681 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D JDM601_3679 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D JDM601_3680 mhpF_1; acetaldehyde dehydrogenase MhpF_1 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation
D JDM601_0190 nat; arylamine N-acetyltransferase Nat K00622 nat; arylamine N-acetyltransferase [EC:2.3.1.5]
C 00642 Ethylbenzene degradation
D JDM601_0738 fadA6_2; acetyl-CoA acetyltransferase FadA6_2 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_1117 fadA6_3; acetyl-CoA acetyltransferase FadA6_3 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_2546 ltp1; lipid-transfer protein Ltp1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3694 fadA5; acetyl-CoA acetyltransferase FadA5 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3713 fadA6_1; acetyl-CoA acetyltransferase FadA6_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3745 ltp1_1; lipid-transfer protein Ltp1_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:mjd00643]
D JDM601_0412 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_3511 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_4201 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_4240 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D JDM601_2851 oxidoreductase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D JDM601_0485 amiB2; amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_1562 amiA2; amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JDM601_2609 amiC; amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation [PATH:mjd00791]
D JDM601_2661 urea amidolyase-related protein K01941 uca; urea carboxylase [EC:6.3.4.6]
D JDM601_0272 ureC; urease alpha subunit UreC K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D JDM601_0273 ureB; urease beta subunit UreB K01429 ureB; urease subunit beta [EC:3.5.1.5]
D JDM601_0274 putative urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D JDM601_3358 isochorismatase family protein
C 00930 Caprolactam degradation [PATH:mjd00930]
D JDM601_2991 alkB; transmembrane alkane 1-monooxygenase AlkB K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D JDM601_3998 alkB; transmembrane alkane 1-monooxygenase AlkB K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D JDM601_0116 monooxygenase K03379 chnB; cyclohexanone monooxygenase [EC:1.14.13.22]
D JDM601_3522 monooxygenase K03379 chnB; cyclohexanone monooxygenase [EC:1.14.13.22]
D JDM601_3411 fadE; acyl-CoA dehydrogenase FadE K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-]
D JDM601_1016 echA8; enoyl-CoA hydratase EchA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_1421 echA8_5; enoyl-CoA hydratase EchA8_5 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2243 echA12; enoyl-CoA hydratase EchA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_2766 echA17; enoyl-CoA hydratase EchA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JDM601_0785 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D JDM601_3248 monooxygenase K14520 hapE; 4-hydroxyacetophenone monooxygenase [EC:1.14.13.84]
C 00621 Dioxin degradation [PATH:mjd00621]
D JDM601_3681 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D JDM601_3679 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D JDM601_3680 mhpF_1; acetaldehyde dehydrogenase MhpF_1 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:mjd00626]
D JDM601_1950 adhA; alcohol dehydrogenase AdhA K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D JDM601_2391 adhC; NADP-dependent alcohol dehydrogenase AdhC K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D JDM601_0149 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D JDM601_3610 adhB; zinc-containing alcohol dehydrogenase NAD-dependent AdhB K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D JDM601_2714 protocatechuate 34-dioxygenase alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D JDM601_2713 protocatechuate 34-dioxygenase beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:mjd00984]
D JDM601_0848 choD; cholesterol oxidase precursor ChoD K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D JDM601_3221 choD; cholesterol oxidase precursor ChoD K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D JDM601_1056 cholesterol dehydrogenase K16045 hsd; 3beta-hydroxy-Delta5-steroid dehydrogenase / steroid Delta-isomerase [EC:1.1.1.145 5.3.3.1]
D JDM601_2803 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3609 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3682 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3692 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3693 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3652 cyp142A3; cytochrome P450 142A3 Cyp142A3 K16046 CYP142; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.28]
D JDM601_2408 fatty-acid-CoA ligase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D JDM601_3360 fadD19_2; fatty-acid-CoA ligase FadD19_2 K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D JDM601_3390 fatty-acid-CoA ligase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D JDM601_3648 fadD19_1; fatty-acid-CoA ligase FadD19_1 K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42]
D JDM601_1122 mcr; alpha-methylacyl-CoA racemase Mcr K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D JDM601_3635 fadE26; acyl-CoA dehydrogenase FadE26 K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D JDM601_3636 fadE27; acyl-CoA dehydrogenase FadE27 K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D JDM601_0738 fadA6_2; acetyl-CoA acetyltransferase FadA6_2 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_1117 fadA6_3; acetyl-CoA acetyltransferase FadA6_3 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_2546 ltp1; lipid-transfer protein Ltp1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3694 fadA5; acetyl-CoA acetyltransferase FadA5 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3713 fadA6_1; acetyl-CoA acetyltransferase FadA6_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3745 ltp1_1; lipid-transfer protein Ltp1_1 K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JDM601_3865 fadE34; acyl-CoA dehydrogenase FadE34 K22820 fadE34; 3-oxochol-4-en-24-oyl-CoA dehydrogenase [EC:1.3.99.-]
D JDM601_3684 dehydratase (MaoC-like) K28218 chsH3; 3-oxochol-4,22-dien-24-oyl-CoA hydratase (S-form) [EC:4.2.1.-]
D JDM601_3633 fabG; short-chain type dehydrogenase/reductase K28219 chsB1; (22S)-hydroxy-3-oxochol-4-en-24-oyl-CoA dehydrogenase [EC:1.1.1.-]
D JDM601_3691 fadE28; acyl-CoA dehydrogenase FadE28 K22821 fadE28; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-]
D JDM601_3690 fadE29; acyl-CoA dehydrogenase FadE29 K22822 fadE29; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase beta subunit [EC:1.3.99.-]
D JDM601_3689 conserved hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-]
D JDM601_3688 conserved hypothetical protein K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-]
D JDM601_3687 ltp2_1; lipid-transfer protein acetyl-CoA acetyltransferase (PaaJ-like) Ltp2_1 K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-]
D JDM601_1031 conserved hypothetical protein K01822 ksi; steroid Delta-isomerase [EC:5.3.3.1]
D JDM601_3664 ketosteroid isomerase-like protein K01822 ksi; steroid Delta-isomerase [EC:5.3.3.1]
D JDM601_2019 flavoprotein K16051 tesI; 3-oxo-5alpha-steroid 4-dehydrogenase [EC:1.3.99.5]
D JDM601_3456 dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D JDM601_3683 dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D JDM601_4271 dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D JDM601_4274 dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D JDM601_1615 oxidoreductase K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D JDM601_3357 oxidoreductase K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D JDM601_3668 oxidoreductase K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D JDM601_4270 oxidoreductase K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
D JDM601_3518 hmp; flavodoxin reductase Hmp K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D JDM601_3855 hmp; flavodoxin reductase Hmp K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D JDM601_4248 hmp; flavodoxin reductase Hmp K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30]
D JDM601_1253 acyl-CoA dehydrogenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D JDM601_2318 oxidoreductase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D JDM601_3854 acyl-CoA dehydrogenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D JDM601_4217 acyl-CoA dehydrogenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D JDM601_4249 acyl-CoA dehydrogenase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12]
D JDM601_3852 oxidase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D JDM601_4273 oxidoreductase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-]
D JDM601_3853 bphC; biphenyl-23-diol 12-dioxygenase BphC K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D JDM601_4250 bphC; biphenyl-23-diol 12-dioxygenase BphC K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25]
D JDM601_1132 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate hydrolase BphD K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17]
D JDM601_3424 fadD3_2; fatty-acid-CoA ligase FadD3_2 K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41]
D JDM601_3717 fadD3; fatty-acid-CoA ligase FadD3 K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41]
D JDM601_3715 short chain dehydrogenase K28220 scdG; hydroxylacyl dehydrogenase [EC:1.1.-.-]
D JDM601_3720 fadE33; acyl-CoA dehydrogenase FadE33 K28221 scdC1; 5OH-HIP-CoA dehydrogenase [EC:1.3.99.-]
D JDM601_3716 fadE30; acyl-CoA dehydrogenase FadE30 K28222 scdC2; 5OH-HIP-CoA dehydrogenase [EC:1.3.99.-]
D JDM601_4179 acyl dehydratase K28224 scdD; enoyl-CoA hydratase [EC:4.2.1.-]
D JDM601_3702 short-chain type dehydrogenase/reductase K28225 scdE; 3-hydroxyl acyl-CoA dehydrogenase [EC:1.1.-.-]
D JDM601_3750 short-chain type dehydrogenase/reductase K28225 scdE; 3-hydroxyl acyl-CoA dehydrogenase [EC:1.1.-.-]
D JDM601_3707 2-nitropropane dioxygenase K28226 scdK; acyl-CoA dehydrogenase [EC:1.3.99.-]
D JDM601_3704 echA20; enoyl-CoA hydratase EchA20 K28227 scdY; HIEC-CoA hydrolase [EC:4.1.-.-]
D JDM601_3705 CoA-transferase (alpha subunit) K28228 scdL1; COCHEA-CoA hydrolase alpha subunit [EC:4.1.-.-]
D JDM601_3706 CoA-transferase (beta subunit) K28229 scdL2; COCHEA-CoA hydrolase beta subunit [EC:4.1.-.-]
D JDM601_3718 fadE31; acyl-CoA dehydrogenase FadE31 K28230 scdM1; acyl-CoA dehydrogenase [EC:1.3.99.-]
D JDM601_3719 fadE32; acyl-CoA dehydrogenase FadE32 K28231 scdM2; acyl-CoA dehydrogenase [EC:1.3.99.-]
D JDM601_0721 echA13_1; enoyl-CoA hydratase EchA13_1 K28232 scdN; enoyl-CoA hydratase [EC:4.2.1.-]
D JDM601_3619 echA13_1; enoyl-CoA hydratase EchA13_1 K28232 scdN; enoyl-CoA hydratase [EC:4.2.1.-]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:mjd03020]
D JDM601_0682 rpoB; DNA-directed RNA polymerase beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDM601_0683 rpoC; DNA-directed RNA polymerase beta chain RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDM601_3280 rpoA; DNA-directed RNA polymerase (alpha chain) RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDM601_2306 rpoZ; DNA-directed RNA polymerase (omega chain) RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D JDM601_0789 ercc3; DNA helicase Ercc3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:mjd03010]
D JDM601_rRNA01 rpmG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM601_rRNA02 rplK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM601_rRNA03 rplA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM601_rRNA04 rplJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM601_rRNA05 rplL; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM601_rRNA06 rpsL; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM601_1805 rpsA; ribosomal protein S1 RpsA K02945 RP-S1; small subunit ribosomal protein S1
D JDM601_2611 rpsB; 30S ribosomal protein S2 RpsB K02967 RP-S2; small subunit ribosomal protein S2
D JDM601_3332 rpsC; 30S ribosomal protein S3 RpsC K02982 RP-S3; small subunit ribosomal protein S3
D JDM601_3281 rpsD; 30S ribosomal protein S4 RpsD K02986 RP-S4; small subunit ribosomal protein S4
D JDM601_3315 rpsE; 30S ribosomal protein S5 RpsE K02988 RP-S5; small subunit ribosomal protein S5
D JDM601_4308 rpsF; 30S ribosomal protein S6 RpsF K02990 RP-S6; small subunit ribosomal protein S6
D JDM601_0695 rpsG; 30S ribosomal protein S7 RpsG K02992 RP-S7; small subunit ribosomal protein S7
D JDM601_3318 rpsH; 30S ribosomal protein S8 RpsH K02994 RP-S8; small subunit ribosomal protein S8
D JDM601_3268 rpsI; ribosomal protein S9 RpsI K02996 RP-S9; small subunit ribosomal protein S9
D JDM601_3339 rpsJ; 30S ribosomal protein S10 RpsJ K02946 RP-S10; small subunit ribosomal protein S10
D JDM601_3282 rpsK; 30S ribosomal protein S11 RpsK K02948 RP-S11; small subunit ribosomal protein S11
D JDM601_0694 rpsL; 30S ribosomal protein S12 RpsL K02950 RP-S12; small subunit ribosomal protein S12
D JDM601_3283 rpsM; 30S ribosomal protein S13 RpsM K02952 RP-S13; small subunit ribosomal protein S13
D JDM601_3319 rpsN; 30S ribosomal protein S14 RpsN K02954 RP-S14; small subunit ribosomal protein S14
D JDM601_2537 rpsO; 30S ribosomal protein S15 RpsO K02956 RP-S15; small subunit ribosomal protein S15
D JDM601_2631 rpsP; 30S ribosomal protein S16 RpsP K02959 RP-S16; small subunit ribosomal protein S16
D JDM601_3329 rpsQ; 30S ribosomal protein S17 RpsQ K02961 RP-S17; small subunit ribosomal protein S17
D JDM601_4306 rpsR; 30S ribosomal protein S18-1 RpsR1 K02963 RP-S18; small subunit ribosomal protein S18
D JDM601_3334 rpsS; 50S ribosomal protein S19 RpsS K02965 RP-S19; small subunit ribosomal protein S19
D JDM601_1503 rpsT; 30S ribosomal protein S20 RpsT K02968 RP-S20; small subunit ribosomal protein S20
D JDM601_0664 rplA; 50S ribosomal protein L1 RplA K02863 RP-L1; large subunit ribosomal protein L1
D JDM601_3335 rplB; 50S ribosomal protein L2 RplB K02886 RP-L2; large subunit ribosomal protein L2
D JDM601_3338 rplC; 50S ribosomal protein L3 RplC K02906 RP-L3; large subunit ribosomal protein L3
D JDM601_3337 rplD; 50S ribosomal protein L4 RplD K02926 RP-L4; large subunit ribosomal protein L4
D JDM601_3320 rplE; 50S ribosomal protein L5 RplE K02931 RP-L5; large subunit ribosomal protein L5
D JDM601_3317 rplF; 50S ribosomal protein L6 RplF K02933 RP-L6; large subunit ribosomal protein L6
D JDM601_4305 rplI; 50S ribosomal protein L9 RplI K02939 RP-L9; large subunit ribosomal protein L9
D JDM601_0677 rplJ; 50S ribosomal protein L10 RplJ K02864 RP-L10; large subunit ribosomal protein L10
D JDM601_0663 rplK; 50S ribosomal protein L11 RplK K02867 RP-L11; large subunit ribosomal protein L11
D JDM601_0678 rplL; 50S ribosomal protein L7/L12 RplL K02935 RP-L7; large subunit ribosomal protein L7/L12
D JDM601_3269 rplM; 50S ribosomal protein L13 RplM K02871 RP-L13; large subunit ribosomal protein L13
D JDM601_3322 rplN; 50S ribosomal protein L14 RplN K02874 RP-L14; large subunit ribosomal protein L14
D JDM601_3313 rplO; 50S ribosomal protein L15 RplO K02876 RP-L15; large subunit ribosomal protein L15
D JDM601_3331 rplP; 50S ribosomal protein L16 RplP K02878 RP-L16; large subunit ribosomal protein L16
D JDM601_3279 rplQ; 50S ribosomal protein L17 RplQ K02879 RP-L17; large subunit ribosomal protein L17
D JDM601_3316 rplR; 50S ribosomal protein L18 RplR K02881 RP-L18; large subunit ribosomal protein L18
D JDM601_2626 rplS; 50S ribosomal protein L19 RplS K02884 RP-L19; large subunit ribosomal protein L19
D JDM601_1822 rplT; 50S ribosomal protein L20 RplT K02887 RP-L20; large subunit ribosomal protein L20
D JDM601_1464 rplU; 50S ribosomal protein L21 RplU K02888 RP-L21; large subunit ribosomal protein L21
D JDM601_3333 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JDM601_3336 rplW; 50S ribosomal protein L23 RplW K02892 RP-L23; large subunit ribosomal protein L23
D JDM601_3321 rplX; 50S ribosomal protein L24 RplX K02895 RP-L24; large subunit ribosomal protein L24
D JDM601_0972 rplY; 50S ribosomal protein L25 RplY K02897 RP-L25; large subunit ribosomal protein L25
D JDM601_1466 rpmA; 50S ribosomal protein L27 RpmA K02899 RP-L27; large subunit ribosomal protein L27
D JDM601_2679 rpmB; 50S ribosomal protein L28 RpmB2_1 K02902 RP-L28; large subunit ribosomal protein L28
D JDM601_3330 rpmC; 50S ribosomal protein L29 RpmC K02904 RP-L29; large subunit ribosomal protein L29
D JDM601_3314 rpmD; 50S ribosomal protein L30 RpmD K02907 RP-L30; large subunit ribosomal protein L30
D JDM601_1297 rpmE; 50S ribosomal protein L31 RpmE K02909 RP-L31; large subunit ribosomal protein L31
D JDM601_0931 rpmF; 50S ribosomal protein L32 RpmF K02911 RP-L32; large subunit ribosomal protein L32
D JDM601_0657 rpmG; 50S ribosomal protein L33 type 2 RpmG2 K02913 RP-L33; large subunit ribosomal protein L33
D JDM601_4346 rpmH; 50S ribosomal protein L34 RpmH K02914 RP-L34; large subunit ribosomal protein L34
D JDM601_1821 rpmI; 50S ribosomal protein L35 RpmL K02916 RP-L35; large subunit ribosomal protein L35
D JDM601_3284 rpmJ; 50S ribosomal protein L36 RpmJ K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:mjd00970]
D JDM601_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JDM601_tRNA15 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JDM601_tRNA37 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JDM601_tRNA14 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM601_tRNA18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM601_tRNA22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM601_tRNA44 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM601_tRNA25 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM601_tRNA12 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JDM601_tRNA33 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JDM601_tRNA16 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM601_tRNA36 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM601_tRNA11 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM601_tRNA35 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM601_tRNA05 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM601_tRNA23 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM601_tRNA32 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM601_tRNA21 tRNA-His K14226 tRNA-His; tRNA His
D JDM601_tRNA01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JDM601_tRNA03 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA28 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA30 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA10 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM601_tRNA20 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM601_tRNA08 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM601_tRNA26 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM601_tRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM601_tRNA13 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JDM601_tRNA24 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM601_tRNA29 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM601_tRNA41 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM601_tRNA42 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM601_tRNA43 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM601_tRNA45 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM601_tRNA46 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM601_tRNA07 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM601_tRNA39 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM601_tRNA40 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM601_tRNA09 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JDM601_tRNA06 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JDM601_tRNA27 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM601_tRNA31 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM601_tRNA34 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM601_tRNA04 tRNA-Ser K14238 tRNA-Sec; tRNA Sec
D JDM601_2694 gltX; glutamyl-tRNA synthetase GltS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDM601_2702 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JDM601_2734 gatA; glutamyl-tRNA (Gln) amidotransferase (subunit A) GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JDM601_2728 gatB; glutamyl-tRNA(Gln) amidotransferase (subunit B) GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JDM601_2735 gatC; glutamyl-tRNA(Gln) amidotransferase (subunit C) GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JDM601_2341 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDM601_2355 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDM601_1570 glyS; glycyl-tRNA synthetase GlyS K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JDM601_2397 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDM601_4143 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM601_0267 selA; selenocysteine synthase SelA K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D JDM601_3871 cysS; cysteinyl-tRNA synthetase 1 CysS1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDM601_0963 metS; methionyl-tRNA synthetase MetS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDM601_2292 fmt; methionyl-tRNA formyltransferase Fmt K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JDM601_1459 valS; valyl-tRNA synthetase protein ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDM601_4322 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDM601_2190 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDM601_3888 lysS; lysyl-tRNA synthetase 1 LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDM601_1291 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDM601_2569 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDM601_2367 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDM601_1827 pheS; phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDM601_1828 pheT; phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDM601_1847 tyrS; tyrosyl-tRNA synthase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDM601_3159 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:mjd03008]
D JDM601_2657 rnc; ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDM601_1394 orn; oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:mjd03060]
D JDM601_3301 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D JDM601_0661 secE; preprotein translocase (tail-anchored membrane protein) SecE K03073 secE; preprotein translocase subunit SecE
D JDM601_2273 secG; protein-export membrane protein (translocase subunit) SecG K03075 secG; preprotein translocase subunit SecG
D JDM601_2374 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D JDM601_2373 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D JDM601_2375 yajC; membrane protein secretion factor YajC K03210 yajC; preprotein translocase subunit YajC
D JDM601_4344 transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM601_1916 secA2; preprotein translocase ATPase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM601_2971 secA1; preprotein translocase SecA1 1 subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM601_2635 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDM601_2647 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JDM601_1719 conserved hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JDM601_2116 tatA; sec-independent protein translocase membrane-bound protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D JDM601_1198 tatB; protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D JDM601_2115 tatC; sec-independent protein translocase transmembrane protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D JDM601_2625 lepB; signal peptidase I LepB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDM601_2185 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:mjd04141]
D JDM601_1596 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D JDM601_0238 hsp; heat shock protein Hsp (heat-stress-induced ribosome-binding protein A) K13993 HSP20; HSP20 family protein
D JDM601_3067 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:mjd04122]
D JDM601_2742 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM601_1560 thiosulfate sulfotransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_3043 cysA2; thiosulfate sulfurtransferase CysA2 K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_3545 cysA2; thiosulfate sulfurtransferase CysA2 K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JDM601_2741 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JDM601_0794 moaE2; molybdenum cofactor biosynthesis protein E2 MoaE2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D JDM601_0797 moaA; molybdenum cofactor biosynthesis protein A2 MoaA2 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D JDM601_0796 moaD2; molybdenum cofactor biosynthesis protein D 2 MoaD2 K03636 moaD; sulfur-carrier protein
D JDM601_2921 moeB1; molybdenum cofactor biosynthesis protein MoeB1 K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D JDM601_0792 moaC2; molybdenum cofactor biosynthesis protein C 2 MoaC2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D JDM601_0387 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome [PATH:mjd03050]
D JDM601_1786 ATPase K13527 mpa; proteasome-associated ATPase
D JDM601_1796 prcA; proteasome (alpha subunit) PrcA K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D JDM601_1795 prcB; proteasome (beta subunit) PrcB K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:mjd03018]
D JDM601_1463 rne; ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12]
D JDM601_0988 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM601_2535 gpsI; bifunctional protein polyribonucleotide nucleotidyltransferase GpsI K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JDM601_1220 deaD; cold-shock DEAD-box protein DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDM601_3678 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM601_1296 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JDM601_2502 hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JDM601_0338 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D JDM601_0431 groEL; 60 kDa chaperonin 2 GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_3237 groEL; 60 kDa chaperone (GroEL1) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_2687 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JDM601_2968 pvdS; transcriptional regulatory protein PvdS K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JDM601_4331 pcnA; poly(a) polymerase PcnA K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:mjd03030]
D JDM601_1711 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_3994 dnaQ; DNA polymerase III (epsilon subunit) DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_2180 dnaE; DNA polymerase III alpha subunit DnaE1 K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM601_4010 dnaZX; DNA polymerase III (subunit gamma/tau) DnaZX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM601_3929 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM601_1502 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM601_0002 dnaN; DNA polymerase III (beta chain) DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM601_4304 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JDM601_1575 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D JDM601_1430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDM601_4307 ssb; single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D JDM601_1666 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D JDM601_2624 rnhB; ribonuclease HII protein RnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JDM601_1802 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM601_2737 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:mjd03410]
D JDM601_3952 nth; endonuclease III Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JDM601_2680 ung; uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM601_3882 mutY; adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JDM601_1846 mpg; 3-methyladenine DNA glycosylase Mpg K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JDM601_0890 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JDM601_2656 fpg; formamidopyrimidine-DNA glycosylase Fpg K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JDM601_1444 formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JDM601_3116 nei; endonuclease VIII Nei K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JDM601_1320 alkA; Ada regulatory protein AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JDM601_1185 tagA; DNA-3-methyladenine glycosylase I TagA K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JDM601_1228 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM601_1365 glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM601_3073 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM601_0401 xthA; exodeoxyribonuclease III protein XthA K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D JDM601_0685 end; endonuclease IV (apurinase) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JDM601_1802 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM601_2737 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:mjd03420]
D JDM601_0983 mfd; transcription-repair coupling factor Mfd (TrcF) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JDM601_1814 uvrA; excinuclease ABC (subunit A-DNA-binding ATPase) UvrA K03701 uvrA; excinuclease ABC subunit A
D JDM601_1809 uvrB; excinuclease ABC (subunit B-helicase) UvrB K03702 uvrB; excinuclease ABC subunit B
D JDM601_2282 uvrC; excinuclease ABC (subunit c-nuclease) UvrC K03703 uvrC; excinuclease ABC subunit C
D JDM601_0894 uvrD1; ATP-dependent DNA helicase II UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_2912 uvrD2; ATP-dependent DNA helicase II UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_2916 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_1802 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM601_2737 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JDM601_0789 ercc3; DNA helicase Ercc3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:mjd03430]
D JDM601_0894 uvrD1; ATP-dependent DNA helicase II UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_2912 uvrD2; ATP-dependent DNA helicase II UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_2916 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_1058 xseA; exodeoxyribonuclease VII (large subunit) XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JDM601_1057 exodeoxyribonuclease K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JDM601_1430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDM601_4307 ssb; single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D JDM601_2180 dnaE; DNA polymerase III alpha subunit DnaE1 K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM601_0002 dnaN; DNA polymerase III (beta chain) DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM601_4010 dnaZX; DNA polymerase III (subunit gamma/tau) DnaZX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM601_1502 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM601_3929 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM601_1711 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_3994 dnaQ; DNA polymerase III (epsilon subunit) DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_2737 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:mjd03440]
D JDM601_1430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDM601_4307 ssb; single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D JDM601_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JDM601_1563 recO; recombination protein O RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JDM601_4003 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JDM601_2483 RecA protein K03553 recA; recombination protein RecA
D JDM601_1802 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM601_2379 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JDM601_2378 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JDM601_2380 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JDM601_2677 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JDM601_0643 recB; exodeoxyribonuclease V (beta chain) RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D JDM601_0644 recC; exodeoxyribonuclease V (gamma chain) RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D JDM601_0642 recD; exodeoxyribonuclease V (alpha chain) RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JDM601_2180 dnaE; DNA polymerase III alpha subunit DnaE1 K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM601_0002 dnaN; DNA polymerase III (beta chain) DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM601_4010 dnaZX; DNA polymerase III (subunit gamma/tau) DnaZX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM601_1502 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM601_3929 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM601_1711 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_3994 dnaQ; DNA polymerase III (epsilon subunit) DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_2297 priA; primosomal protein N' PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
D JDM601_0881 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D JDM601_3038 putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:mjd03250]
D JDM601_0010 ppiA; iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:mjd02010]
D JDM601_1512 subI; sulfate-binding lipoprotein SubI K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JDM601_1513 cysT; sulfate-transport integral membrane protein ABC transporter CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JDM601_1514 cysW; sulfate-transport integral membrane protein ABC transporter CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D JDM601_1515 cysA1; sulfate-transport ATP-binding protein ABC transporter CysA1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JDM601_2323 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JDM601_2322 ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein
D JDM601_2321 conserved hypothetical protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JDM601_1945 modA; molybdate-binding lipoprotein ModA K02020 modA; molybdate transport system substrate-binding protein
D JDM601_1946 modB; molybdenum-transport integral membrane protein ABC transporter ModB K02018 modB; molybdate transport system permease protein
D JDM601_1947 modC; molybdenum-transport ATP-binding protein ABC transporter ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D JDM601_1209 sugC; sugar-transport ATP-binding protein ABC transporter SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JDM601_2084 sugar-transport ATP-binding protein ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JDM601_1206 lpqY; sugar-binding lipoprotein LpqY K10236 thuE; trehalose/maltose transport system substrate-binding protein
D JDM601_1207 sugA; sugar-transport integral membrane protein ABC transporter SugA K10237 thuF; trehalose/maltose transport system permease protein
D JDM601_1208 sugB; sugar-transport integral membrane protein ABC transporter SugB K10238 thuG; trehalose/maltose transport system permease protein
D JDM601_0122 mce1A; MCE-family protein Mce1A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0123 mce1B; MCE-family protein Mce1B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0124 mce1C; MCE-family protein Mce1C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0125 mce1D; MCE-family protein Mce1D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0126 lprK; MCE family lipoprotein LprK K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0127 mce1F; MCE-family protein Mce1F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0135 mce5F; Mce family protein Mce5F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0136 mce5E; Mce family protein Mce5E K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0137 mce5D; MCE-family protein Mce5D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0138 mce5C; Mce family protein Mce5C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0139 mce5B; Mce family protein Mce5B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0140 mce5A; Mce family protein Mce5A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1096 mce5F; Mce family protein Mce5F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1097 mce6E; MCE family lipoprotein Mce6E K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1098 mce6D; MCE-family protein Mce6D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1099 mce6C; MCE-family protein Mce6C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1100 mce5B; Mce family protein Mce5B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1101 mce5A; Mce protein Mce5A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2893 mce5A; Mce protein Mce5A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2894 mce5B; Mce family protein Mce5B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2895 mce6C; MCE-family protein Mce6C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2896 mce5D; MCE-family protein Mce5D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2897 mce6E; MCE family lipoprotein Mce6E K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2898 mce5F; Mce family protein Mce5F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3468 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3469 lprM_1; MCE family lipoprotein LprM K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3470 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3471 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3472 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3473 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3625 mce4F; MCE-family protein Mce4F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3626 lprN; MCE family lipoprotein LprN K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3627 mce4D; MCE-family protein Mce4D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3628 mce4C; MCE-family protein Mce4C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3629 mce4B; MCE-family protein Mce4B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3630 mce4A; MCE-family protein Mce4A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3790 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3791 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3792 putative Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3793 mce6C; MCE-family protein Mce6C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3794 mce1B; MCE-family protein Mce1B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3795 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4280 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4281 virulence factor Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4282 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4283 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4284 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4285 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0120 yrbE1A; integral membrane protein YrbE1A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0121 yrbE1B; integral membrane protein YrbE1B K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0141 integral ABC-type transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0142 yrbE5A; YrbE family protein YrbE5A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0710 yrbE4A; integral membrane protein YrbE4a K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0711 yrbE4B; integral membrane protein YrbE4b K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_1102 integral ABC-type transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_1103 yrbE5A; YrbE family protein YrbE5A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_2891 yrbE5A; YrbE family protein YrbE5A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_2892 integral ABC-type transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_3631 yrbE4B; membrane protein YrbE4B K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_3632 yrbE4A; membrane protein YrbE4A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_3796 yrbE4B; integral membrane protein YrbE4b K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_3797 yrbE6A; integral membrane protein YrbE6A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_4286 yrbE4B; integral membrane protein YrbE4b K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_4287 yrbE4A; integral membrane protein YrbE4a K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0681 mkl; ribonucleotide-transport ATP-binding protein ABC transporter Mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JDM601_3025 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3530 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3534 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3538 phoS2_1; periplasmic phosphate-binding lipoprotein PhoS2_1 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3531 pstC2; phosphate-transport integral membrane ABC transporter PstC2 K02037 pstC; phosphate transport system permease protein
D JDM601_3537 pstC2_1; phosphate-transport integral membrane ABC transporter PstC2_1 K02037 pstC; phosphate transport system permease protein
D JDM601_3532 pstA1; phosphate-transport integral membrane ABC transporter PstA1 K02038 pstA; phosphate transport system permease protein
D JDM601_3536 pstA; phosphate-transport integral membrane ABC transporter PstA K02038 pstA; phosphate transport system permease protein
D JDM601_3535 phoT; phosphate-transport ATP-binding protein ABC transporter PhoT K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JDM601_2478 glutamate binding protein K10005 gluB; glutamate transport system substrate-binding protein
D JDM601_2479 hypothetical protein K10006 gluC; glutamate transport system permease protein
D JDM601_2480 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D JDM601_2477 glutamine ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D JDM601_1110 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_3805 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_3831 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_1274 oppA; periplasmic oligopeptide-binding lipoprotein OppA K13889 gsiB; glutathione transport system substrate-binding protein
D JDM601_1277 oppB; oligopeptide-transport integral membrane protein ABC transporter OppB K13890 gsiC; glutathione transport system permease protein
D JDM601_1276 oppC; oligopeptide-transport integral membrane protein ABC transporter OppC K13891 gsiD; glutathione transport system permease protein
D JDM601_1275 oppD; oligopeptide-transport ATP-binding protein ABC transporter OppD K13892 gsiA; glutathione transport system ATP-binding protein
D JDM601_1587 conserved hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D JDM601_4083 rfbD; O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D JDM601_4081 rfbE; O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter RfbE K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D JDM601_2841 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JDM601_2842 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JDM601_1535 transmembrane ATP-binding protein ABC transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JDM601_1536 transmembrane ATP-binding protein ABC transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JDM601_1237 transmembrane ATP-binding protein ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM601_1915 drug-transport transmembrane ATP-binding protein ABC transporter K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:mjd03070]
D JDM601_2374 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D JDM601_2373 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D JDM601_0661 secE; preprotein translocase (tail-anchored membrane protein) SecE K03073 secE; preprotein translocase subunit SecE
D JDM601_2273 secG; protein-export membrane protein (translocase subunit) SecG K03075 secG; preprotein translocase subunit SecG
D JDM601_3301 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D JDM601_2375 yajC; membrane protein secretion factor YajC K03210 yajC; preprotein translocase subunit YajC
D JDM601_4344 transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM601_1916 secA2; preprotein translocase ATPase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM601_2971 secA1; preprotein translocase SecA1 1 subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM601_2647 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JDM601_2635 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDM601_2116 tatA; sec-independent protein translocase membrane-bound protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D JDM601_1198 tatB; protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D JDM601_2115 tatC; sec-independent protein translocase transmembrane protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:mjd02020]
D JDM601_0478 senX3; two-component sensor histidine kinase SenX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JDM601_0479 regX3; two-component sensory transduction protein RegX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D JDM601_3025 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3530 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3534 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3538 phoS2_1; periplasmic phosphate-binding lipoprotein PhoS2_1 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_0605 pepA; serine protease PepA K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM601_1197 htrA; serine protease HtrA (DegP protein) K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM601_0994 kdpD; two-component system response phosphate sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JDM601_0993 kdpE; transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JDM601_2260 antibiotic ABC transporter transmembrane protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JDM601_0933 mprB; two-component sensor kinase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D JDM601_0932 mprA; two component response transcriptional regulatory protein MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D JDM601_0934 pepD; serine protease PepD K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D JDM601_2985 mtrB; two-component sensory transduction histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JDM601_2986 mtrA; two-component sensory transduction transcriptional regulatory protein MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D JDM601_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JDM601_0822 prrB; two-component sensor histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3]
D JDM601_0823 prrA; two-component response transcriptional regulatory protein PrrA K07671 prrA; two-component system, OmpR family, response regulator PrrA
D JDM601_3928 trcS; two-component sensor histidine kinase TrcS K07656 trcS; two-component system, OmpR family, sensor histidine kinase TrcS [EC:2.7.13.3]
D JDM601_3927 trcR; two-component transcriptional regulator TrcR K07672 trcR; two-component system, OmpR family, response regulator TrcR
D JDM601_1992 lpqR; lipoprotein LpqR K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM601_1203 citE_1; citrate (pro-3s)-lyase (beta subunit) CitE_1 K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JDM601_1407 citE; citrate (pro-3s)-lyase (beta subunit) CitE K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JDM601_2343 citE_1; citrate (pro-3s)-lyase (beta subunit) CitE_1 K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JDM601_1213 mez_1; (NAD) dependent malate oxidoreductase Mez_1 K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JDM601_1878 mez; (NAD) dependent malate oxidoreductase Mez K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D JDM601_1149 respiratory nitrate reductase subunit alpha narG K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_1150 narH; NarH K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_1152 respiratory nitrate reductase subunit gamma NarI K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_1151 nitrate reductase delta subunit K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D JDM601_0912 two-component system sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JDM601_2979 devS; two-component sensor histidine kinase DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D JDM601_2978 devR; two-component transcriptional regulatory protein DevR K07695 devR; two-component system, NarL family, response regulator DevR
D JDM601_3941 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JDM601_3940 putative transmembrane protein K12510 tadB; tight adherence protein B
D JDM601_3939 conserved hypothetical protein K12511 tadC; tight adherence protein C
D JDM601_1678 glnA2; glutamine synthetase GlnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_1682 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2581 glnA3; glutamine synthetase GlnA3 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_4178 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2887 Short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_2982 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JDM601_3076 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JDM601_3954 regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JDM601_1321 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D JDM601_1662 ptpA; phosphotyrosine protein phosphatase PtpA K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D JDM601_2646 celA; cellobiohydrolase a (14-beta-cellobiosidase a) CelA K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
D JDM601_3323 conserved hypothetical protein K13444 SUMF1; formylglycine-generating enzyme [EC:1.8.3.7]
C 04146 Peroxisome [PATH:mjd04146]
D JDM601_1122 mcr; alpha-methylacyl-CoA racemase Mcr K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4]
D JDM601_1578 acyl-CoA dehydrogenase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JDM601_1716 fadD15; long-chain-fatty-acid-CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3414 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3517 acyl-CoA synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3658 fadD4; fatty-acid-CoA ligase FadD4 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3839 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_2914 nudC; NADH pyrophosphatase NudC K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D JDM601_1642 flavoprotein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26]
D JDM601_3187 icd2; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JDM601_2854 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D JDM601_3050 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D JDM601_3987 katE; catalase KatE K03781 katE; catalase [EC:1.11.1.6]
D JDM601_0406 sodC; periplasmic superoxide dismutase K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1]
D JDM601_4158 sodA; superoxide dismutase K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
D JDM601_3751 long-chain fatty-acid CoA ligase
D JDM601_3784 fadD4; fatty-acid-CoA ligase FadD4
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:mjd02024]
D JDM601_2135 trpE; anthranilate synthase component I TrpE K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D JDM601_1725 aroG; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JDM601_0993 kdpE; transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JDM601_3245 gadB; glutamate decarboxylase GadB K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D JDM601_1110 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_3805 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_3831 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_1716 fadD15; long-chain-fatty-acid-CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3414 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3517 acyl-CoA synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3658 fadD4; fatty-acid-CoA ligase FadD4 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3839 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3954 regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JDM601_2289 ribG; bifunctional riboflavin biosynthesis protein RibG K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JDM601_2372 ABC-type dipeptide transport system periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JDM601_4344 transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM601_0661 secE; preprotein translocase (tail-anchored membrane protein) SecE K03073 secE; preprotein translocase subunit SecE
D JDM601_2273 secG; protein-export membrane protein (translocase subunit) SecG K03075 secG; preprotein translocase subunit SecG
D JDM601_3301 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D JDM601_2375 yajC; membrane protein secretion factor YajC K03210 yajC; preprotein translocase subunit YajC
D JDM601_1916 secA2; preprotein translocase ATPase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM601_2971 secA1; preprotein translocase SecA1 1 subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM601_2647 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JDM601_2635 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDM601_3751 long-chain fatty-acid CoA ligase
D JDM601_3784 fadD4; fatty-acid-CoA ligase FadD4
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D JDM601_2982 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JDM601_3076 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
C 02040 Flagellar assembly
D JDM601_2444 sigB; RNA polymerase sigma factor SigB K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JDM601_0988 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:mjd04981]
D JDM601_0940 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D JDM601_2509 dfrA; dihydrofolate reductase DfrA K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JDM601_1039 glyA; serine hydroxymethyltransferase 1 GlyA1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JDM601_2510 thyA; thymidylate synthase ThyA K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JDM601_1449 homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D JDM601_1775 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism [PATH:mjd04980]
D JDM601_1312 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D JDM601_2220 LAO/AO transport system kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D JDM601_3513 transport system kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D JDM601_2221 mutB; methylmalonyl-CoA mutase large subunit MutB K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_2222 mutA; methylmalonyl-CoA mutase small subunit MutA K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D JDM601_1775 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:mjd01501]
D JDM601_0220 lpqI; lipoprotein LpqI K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JDM601_1940 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D JDM601_1941 transcriptional regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D JDM601_1737 pbpB; penicillin-binding membrane protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:mjd01502]
D JDM601_1992 lpqR; lipoprotein LpqR K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM601_2684 ddl; d-alanine--D-alanine ligase DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDM601_3243 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D JDM601_1739 murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-26-diaminopimelate-D-alanyl-D-alanyl ligase MurF K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JDM601_1740 mraY; phospho-N-acetylmuramoyl-pentappeptidetransferase MurX K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDM601_1743 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol-N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:mjd01503]
D JDM601_4005 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM601_4030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM601_4340 hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM601_0605 pepA; serine protease PepA K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM601_1197 htrA; serine protease HtrA (DegP protein) K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM601_0010 ppiA; iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:mjd01000]
C 01001 Protein kinases [BR:mjd01001]
D JDM601_0381 pknG; serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1]
D JDM601_1619 pknH; transmembrane serine/threonine-protein kinase H PknH K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1]
D JDM601_1960 transmembrane serine/threonine-protein kinase K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1]
D JDM601_0014 pknB; serine/threonine-protein kinase B PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JDM601_0016 pknA; serine/threonine-protein kinase a PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JDM601_0066 transmembrane serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JDM601_0563 pknF_2; serine/threonine-protein kinase PknF_2 K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JDM601_0843 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D JDM601_1345 pknF_3; anchored-membrane serine/threonine-protein kinase PknF_3 K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D JDM601_1726 pknL; transmembrane serine/threonine-protein kinase L PknL K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D JDM601_2962 pknF_3; anchored-membrane serine/threonine-protein kinase PknF_3 K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D JDM601_3024 pknD; transmembrane serine/threonine-protein kinase D PknD K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D JDM601_3533 pknD; transmembrane serine/threonine-protein kinase D PknD K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1]
D JDM601_0478 senX3; two-component sensor histidine kinase SenX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JDM601_0994 kdpD; two-component system response phosphate sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JDM601_0933 mprB; two-component sensor kinase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D JDM601_2985 mtrB; two-component sensory transduction histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JDM601_0822 prrB; two-component sensor histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3]
D JDM601_3928 trcS; two-component sensor histidine kinase TrcS K07656 trcS; two-component system, OmpR family, sensor histidine kinase TrcS [EC:2.7.13.3]
D JDM601_2952 two-component regulator - sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JDM601_3613 phoR; two-component system response phosphate sensor kinase PhoR K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JDM601_4041 tcrY; two-component sensor kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JDM601_0912 two-component system sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JDM601_2979 devS; two-component sensor histidine kinase DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D JDM601_2933 sensor kinase from two-component regulatory system K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:mjd01009]
D JDM601_2988 sahH; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JDM601_1596 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D JDM601_0019 pstP; serine/threonine phosphatase PstP K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D JDM601_2770 serB2; phosphoserine phosphatase SerB2 K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:mjd01002]
D JDM601_2185 lspA; lipoprotein signal peptidase LspA K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JDM601_3218 guaA; GMP synthase GuaA K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JDM601_2580 amidotransferase K07010 K07010; putative glutamine amidotransferase
D JDM601_2237 iipA; invasion and intracellular persistence protein IipA K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D JDM601_2236 iipB; invasion and intracellular persistence protein IipB K21474 ripB; peptidoglycan DL-endopeptidase RipB [EC:3.4.-.-]
D JDM601_3566 purF; amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JDM601_4176 gltB; ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JDM601_3251 glmS; glucosamine-fructose-6-phosphate aminotransferase GlmS K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JDM601_1701 asnB; asparagine synthetase AsnB K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDM601_3640 asparagine synthetase-like protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D JDM601_3089 intracellular protease PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D JDM601_1120 integral membrane protein K07052 K07052; CAAX protease family protein
D JDM601_1951 integral membrane protein K07052 K07052; CAAX protease family protein
D JDM601_1441 pepN; aminopeptidase N PepN K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JDM601_0161 zinc metalloprotease K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D JDM601_1992 lpqR; lipoprotein LpqR K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM601_1690 pepB; leucyl aminopeptidase PepB K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JDM601_1178 dapE; succinyl-diaminopimelate desuccinylase DapE K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JDM601_2584 mapB; methionine aminopeptidase MapB K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JDM601_3299 mapA; methionine aminopeptidase MapA K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JDM601_3899 ftsH; membrane-bound protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDM601_0558 hspX; peptidase heat shock protein X HspX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D JDM601_1940 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D JDM601_1804 conserved hypothetical protein K24131 prsW; protease PrsW [EC:3.4.-.-]
D JDM601_0605 pepA; serine protease PepA K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM601_1197 htrA; serine protease HtrA (DegP protein) K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM601_0934 pepD; serine protease PepD K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D JDM601_0049 mycP2; alanine and proline rich membrane-anchored mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_0299 mycP3; membrane-anchored mycosin MycP3 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_1899 mycP5; proline rich membrane-anchored mycosin MycP5 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_3275 mycP4; membrane-anchored serine protease (mycosin) MycP4 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_0443 peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D JDM601_3580 ptrB; protease II (oligopeptidase B) PtrB K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D JDM601_2633 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM601_3152 dacC; penicillin-binding protein DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM601_3909 dacB1; D-alanyl-D-alanine carboxypeptidase DacB1 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JDM601_1447 clpP; ATP-dependent Clp protease proteolytic subunit ClpP1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JDM601_1448 clpP2; ATP-dependent Clp protease proteolytic subunit ClpP2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JDM601_2906 serine protease K07177 K07177; Lon-like protease
D JDM601_2459 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JDM601_2625 lepB; signal peptidase I LepB K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JDM601_3900 ephA; epoxide hydrolase EphA K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-]
D JDM601_0151 lysophospholipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D JDM601_3306 ssp; protease IV Ssp K04773 sppA; protease IV [EC:3.4.21.-]
D JDM601_3309 protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D JDM601_3310 signal peptide peptidase SppA 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D JDM601_1796 prcA; proteasome (alpha subunit) PrcA K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D JDM601_1795 prcB; proteasome (beta subunit) PrcB K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D JDM601_1592 conserved hypothetical protein K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:mjd01003]
D JDM601_2101 ppm1B; polyprenol-monophosphomannose synthase Ppm1B K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D JDM601_0957 conserved hypothetical protein K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D JDM601_2393 pimA; alpha-mannosyltransferase PimA K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D JDM601_1715 glycosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D JDM601_1147 pimE; transmembrane protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D JDM601_2752 transferase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D JDM601_1187 glycosyl transferase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D JDM601_0018 rodA; cell division protein RodA K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_1742 ftsW; FtsW-like protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_1301 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JDM601_1721 integral membrane protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-]
D JDM601_1728 integral membrane protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D JDM601_2256 integral membrane protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D JDM601_1811 transmembrane protein K14340 K14340; mannosyltransferase [EC:2.4.1.-]
D JDM601_4104 embA; integral membrane indolylacetylinositol arabinosyltransferase EmbA K11385 embA; arabinosyltransferase A [EC:2.4.2.-]
D JDM601_4105 embB; integral membrane indolylacetylinositol arabinosyltransferase EmbB K11386 embB; arabinosyltransferase B [EC:2.4.2.-]
D JDM601_4102 embC; integral membrane indolylacetylinositol arabinosyltransferase EmbC K11387 embC; arabinosyltransferase C [EC:2.4.2.-]
D JDM601_4101 transmembrane protein K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46]
D JDM601_4123 transmembrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-]
D JDM601_2419 transmembrane protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47]
D JDM601_0218 transmembrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D JDM601_4079 transmembrane protein K22902 K22902; D-galactosaminyltransferase
D JDM601_4082 L-rhamnosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D JDM601_4126 glfT; bifunctional UDP-galactofuranosyl transferase GlfT K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288]
D JDM601_3016 wbbL1; dTDP-rha:A-D-GlcNAc-diphosphoryl polyprenol A-3-L-rhamnosyl transferase WbbL1 K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D JDM601_2995 glycosyltransferase K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393]
D JDM601_3621 otsA; alpha alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D JDM601_1183 putative glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:mjd01005]
D JDM601_1301 rfe; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase Rfe K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:mjd01011]
D JDM601_1313 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JDM601_0471 murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JDM601_1744 murC; UDP-N-acetylmuramate-alanine ligase MurC K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JDM601_1741 murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JDM601_1738 murE; UDP-N-acetylmuramoylalanyl-D-glutamate-26-diaminopimelate ligase MurE K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JDM601_2684 ddl; d-alanine--D-alanine ligase DdlA K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JDM601_3243 alr; alanine racemase Alr K01775 alr; alanine racemase [EC:5.1.1.1]
D JDM601_1341 murI; glutamate racemase MurI K01776 murI; glutamate racemase [EC:5.1.1.3]
D JDM601_1740 mraY; phospho-N-acetylmuramoyl-pentappeptidetransferase MurX K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JDM601_1743 murG; UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol-N-acetylglucosamine transferase MurG K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JDM601_1767 transmembrane protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JDM601_4334 transmembrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D JDM601_1737 pbpB; penicillin-binding membrane protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JDM601_0017 pbpA; penicillin-binding protein PbpA K05364 pbpA; penicillin-binding protein A
D JDM601_2633 dacB; D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM601_3152 dacC; penicillin-binding protein DacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D JDM601_3909 dacB1; D-alanyl-D-alanine carboxypeptidase DacB1 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D JDM601_0018 rodA; cell division protein RodA K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_1742 ftsW; FtsW-like protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_1992 lpqR; lipoprotein LpqR K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D JDM601_2237 iipA; invasion and intracellular persistence protein IipA K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
D JDM601_2236 iipB; invasion and intracellular persistence protein IipB K21474 ripB; peptidoglycan DL-endopeptidase RipB [EC:3.4.-.-]
D JDM601_2339 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D JDM601_4005 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM601_4030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM601_4340 hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:mjd01004]
D JDM601_1383 fas; fatty acid synthase Fas K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D JDM601_1652 fabD; malonyl CoA-acyl carrier protein transacylase FabD K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JDM601_0225 fabG; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3393 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3410 fabG; 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3595 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_3768 short-chain type dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_4239 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JDM601_0108 tesB2; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_2127 tesB1; acyl-CoA thioesterase II TesB1 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_2387 tesB2; acyl-CoA thioesterase II TesB2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_4058 tesB1; acyl-CoA thioesterase II TesB1 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_4242 tesB2; acyl-CoA thioesterase II TesB2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JDM601_1650 kasA; 3-oxoacyl-(acyl carrier protein) synthase I K11609 kasA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase I [EC:2.3.1.293]
D JDM601_1649 kasB; 3-oxoacyl-(acyl carrier protein) synthase II K27070 kasB; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase II [EC:2.3.1.294]
D JDM601_2027 kasB; 3-oxoacyl-(acyl carrier protein) synthase II K27070 kasB; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase II [EC:2.3.1.294]
D JDM601_2232 fabG1; 3-oxoacyl-(acyl carrier protein) reductase K11610 mabA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.-]
D JDM601_0658 (3R)-hydroxyacyl-ACP dehydratase subunit HadA K27071 hadA; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadA [EC:4.2.1.-]
D JDM601_0659 (3R)-hydroxyacyl-ACP dehydratase subunit HadB K27072 hadB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadB [EC:4.2.1.-]
D JDM601_4227 (3R)-hydroxyacyl-ACP dehydratase subunit HadB K27689 hadAB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadAB [EC:4.2.1.-]
D JDM601_0660 (3R)-hydroxyacyl-ACP dehydratase subunit HadC K27073 hadC; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadC [EC:4.2.1.-]
D JDM601_0500 conserved hypothetical protein K27074 hadD; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadD [EC:4.2.1.-]
D JDM601_2231 inhA; enoyl-(acyl carrier protein) reductase K11611 inhA; meromycolic acid enoyl-[acyl-carrier protein] reductase [EC:1.3.1.118]
D JDM601_0873 desA1_1; acyl-(acyl-carrier protein) desaturase DesA1_1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D JDM601_3526 desA1; acyl-(acyl-carrier protein) desaturase DesA1 K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D JDM601_1040 desA2; acyl-(acyl-carrier protein) desaturase DesA2 K03922 desA2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.-]
D JDM601_0076 desA3_2; linoleoyl-CoA desaturase DesA3_2 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_0861 desA3_1; linoleoyl-CoA desaturase DesA3_1 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_1451 desA3_2; linoleoyl-CoA desaturase DesA3_2 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_2874 desA3_2; linoleoyl-CoA desaturase DesA3_2 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_2965 desA3_1; linoleoyl-CoA desaturase DesA3_1 K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-]
D JDM601_4117 pks13; polyketide synthase Pks13 K12437 pks13; polyketide synthase 13
D JDM601_2215 beta-ketoacyl synthase K12440 ppsA; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase A [EC:2.3.1.292]
D JDM601_2214 ppsA; phenolpthiocerol synthesis type-I polyketide synthase PpsA K12441 ppsB; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase B [EC:2.3.1.292]
D JDM601_2212 ppsD; phenolpthiocerol synthesis type-I polyketide synthase PpsD K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D JDM601_2213 ppsD; phenolpthiocerol synthesis type-I polyketide synthase PpsD K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D JDM601_2211 ppsE; phenolpthiocerol synthesis type-I polyketide synthase PpsE K12444 ppsE; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase E [EC:2.3.1.292]
D JDM601_1540 mbtC; polyketide synthase MbtC K04790 mbtC; mycobactin polyketide synthetase MbtC
D JDM601_1541 mbtD; polyketide synthase MbtD K04791 mbtD; mycobactin polyketide synthetase MbtD
D JDM601_3945 acs; acetyl-coenzyme A synthetase Acs K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JDM601_1624 AMP-binding domain protein K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D JDM601_3426 acyl-CoA synthetase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-]
D JDM601_1716 fadD15; long-chain-fatty-acid-CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3414 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3517 acyl-CoA synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3658 fadD4; fatty-acid-CoA ligase FadD4 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3839 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_1841 long-chain acyl-CoA synthase K03822 K03822; putative long chain acyl-CoA synthase [EC:6.2.1.-]
D JDM601_1172 fadD36; fatty-acid-CoA synthetase FadD36 K12429 fadD36; fatty acid CoA ligase FadD36
D JDM601_4189 fadD9; fatty-acid-CoA ligase FadD9 K12421 fadD9; fatty acid CoA ligase FadD9
D JDM601_0031 fadD1; fatty-acid-CoA ligase FadD1 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_0119 fadD5; fatty-acid-CoA ligase FadD5 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_0372 fatty-acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_0542 fadD8; fatty-acid-CoA synthase FadD8 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_0722 fadD8; fatty-acid-CoA synthase FadD8 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_0853 fatty-acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_0970 pks16; polyketide synthase Pks16 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_1181 fadD6; fatty-acid-CoA ligase FadD6 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_1400 fadD35; fatty-acid-CoA ligase FadD35 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_2009 fadD31; acyl-CoA ligase FadD31 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_3638 fadD17; fatty-acid-CoA synthetase FadD17 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_4259 fatty-acid-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D JDM601_2216 fadD26; fatty acyl-AMP ligase FadD26 K12426 fadD26; long-chain fatty acid adenylase/transferase FadD26 [EC:6.2.1.59]
D JDM601_2582 fadD28; fatty acyl-AMP ligase FadD28 K12426 fadD26; long-chain fatty acid adenylase/transferase FadD26 [EC:6.2.1.59]
D JDM601_3262 fatty-acid-CoA ligase K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-]
D JDM601_4118 fadD32; fatty acyl-AMP ligase FadD32 K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-]
D JDM601_1425 plsB2; glycerol-3-phosphate acyltransferase PlsB2 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D JDM601_1722 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:mjd01008]
D JDM601_2215 beta-ketoacyl synthase K12440 ppsA; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase A [EC:2.3.1.292]
D JDM601_2214 ppsA; phenolpthiocerol synthesis type-I polyketide synthase PpsA K12441 ppsB; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase B [EC:2.3.1.292]
D JDM601_2212 ppsD; phenolpthiocerol synthesis type-I polyketide synthase PpsD K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D JDM601_2213 ppsD; phenolpthiocerol synthesis type-I polyketide synthase PpsD K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292]
D JDM601_2211 ppsE; phenolpthiocerol synthesis type-I polyketide synthase PpsE K12444 ppsE; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase E [EC:2.3.1.292]
D JDM601_1527 ppsD; phenolpthiocerol synthesis type-I polyketide synthase PpsD K15320 ATX; 6-methylsalicylic acid synthase [EC:2.3.1.165]
D JDM601_1760 chalcone synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D JDM601_1545 MbtH-like protein K05375 mbtH; MbtH protein
D JDM601_2550 pptII; phosphopantetheinyl transferase PptII K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7]
D JDM601_1528 mbtA; bifunctional enzyme MbtA: salicyl-AMP ligase (SAL-AMP ligase) + salicyl-S-ACP synthetase K04787 mbtA; mycobactin salicyl-AMP ligase [EC:6.3.2.-]
D JDM601_1529 mbtB; phenyloxazoline synthase MbtB K04788 mbtB; mycobactin phenyloxazoline synthetase
D JDM601_1540 mbtC; polyketide synthase MbtC K04790 mbtC; mycobactin polyketide synthetase MbtC
D JDM601_1541 mbtD; polyketide synthase MbtD K04791 mbtD; mycobactin polyketide synthetase MbtD
D JDM601_1542 mbtE; non-ribosomal peptide synthetase MbtE K04789 mbtE; mycobactin peptide synthetase MbtE
D JDM601_1543 mbtF; non-ribosomal peptide synthetase MbtF K04792 mbtF; mycobactin peptide synthetase MbtF
D JDM601_4210 hydrolase K21159 sgcF; epoxide hydrolase
D JDM601_1761 conserved hypothetical protein K16168 bpsB; methyltransferase
D JDM601_1544 mbtG; lysine-N-oxygenase MbtG K04793 mbtG; mycobactin lysine-N-oxygenase
C 01006 Prenyltransferases [BR:mjd01006]
D JDM601_1729 idsA2; geranylgeranyl pyrophosphate synthetase IdsA2 K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JDM601_1033 uppS; short (C15) chain Z-isoprenyl diphosphate synthase UppS K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D JDM601_2469 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JDM601_0531 menA; 14-dihydroxy-2-naphthoate octaprenyltransferase MenA K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JDM601_2265 ctaB; cytochrome C oxidase assembly factor CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D JDM601_4124 transmembrane protein K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45]
C 01007 Amino acid related enzymes [BR:mjd01007]
D JDM601_2694 gltX; glutamyl-tRNA synthetase GltS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDM601_1847 tyrS; tyrosyl-tRNA synthase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDM601_3159 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JDM601_3871 cysS; cysteinyl-tRNA synthetase 1 CysS1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDM601_1291 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDM601_0963 metS; methionyl-tRNA synthetase MetS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDM601_2190 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDM601_1459 valS; valyl-tRNA synthetase protein ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDM601_4322 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDM601_3888 lysS; lysyl-tRNA synthetase 1 LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDM601_2355 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDM601_2367 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDM601_1570 glyS; glycyl-tRNA synthetase GlyS K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JDM601_4143 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM601_2569 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDM601_2397 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDM601_2341 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDM601_1827 pheS; phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDM601_1828 pheT; phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDM601_0329 aspC; aspartate aminotransferase AspC K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JDM601_0782 aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D JDM601_2146 hisC1; histidinol-phosphate aminotransferase HisC1 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_4050 hisC2; histidinol-phosphate aminotransferase HisC2 K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JDM601_2162 bioF1; 8-amino-7-oxononanoate synthase BioF1 K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D JDM601_1233 aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JDM601_1833 argD; acetylornithine aminotransferase ArgD K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JDM601_2377 gabT; 4-aminobutyrate aminotransferase GabT K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JDM601_2698 argD; acetylornithine aminotransferase ArgD K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D JDM601_2163 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D JDM601_0522 hemL; glutamate-1-semialdehyde 21-aminomutase HemL K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JDM601_1693 ilvE; branched-chain amino acid transaminase IlvE K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JDM601_0810 serC; phosphoserine aminotransferase SerC K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:mjd00199]
D JDM601_3604 cyp51B1; cytochrome P450 51B1 Cyp51B1 K05917 CYP51; sterol 14alpha-demethylase [EC:1.14.14.154 1.14.15.36]
D JDM601_2803 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3609 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3682 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3692 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_3693 cyp125A7; cytochrome P450 125A7 Cyp125A7 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29]
D JDM601_1223 cyp130A4; cytochrome P450 130A4 Cyp130A4 K21119 CYP130; cytochrome P450 family 130
D JDM601_0079 cyp138A3; cytochrome P450 138A3 Cyp138A3 K24192 CYP138; cytochrome P450 family 138 [EC:1.14.-.-]
D JDM601_3652 cyp142A3; cytochrome P450 142A3 Cyp142A3 K16046 CYP142; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.28]
D JDM601_0948 cyp144A4; cytochrome P450 144A4 Cyp144A4 K21200 CYP144; cytochrome P450 family 144
D JDM601_3442 cyp150A6; cytochrome P450 150A6 Cyp150A6 K23812 CYP150A5; cytochrome P450 family 150 subfamily A5 [EC:1.14.-.-]
D JDM601_3500 cyp150A5; cytochrome P450 150A5 Cyp150A5 K23812 CYP150A5; cytochrome P450 family 150 subfamily A5 [EC:1.14.-.-]
C 00194 Photosynthesis proteins [BR:mjd00194]
D JDM601_1310 atpC; ATP synthase epsilon chain AtpC K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JDM601_1309 atpD; ATP synthase beta chain AtpD K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JDM601_1308 atpG; ATP synthase gamma chain AtpG K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JDM601_1307 atpA; ATP synthase alpha chain AtpA K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JDM601_1306 atpH; ATP synthase delta chain AtpH K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JDM601_1305 atpF; ATP synthase B chain AtpF K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JDM601_1304 atpE; ATP synthase C chain AtpE K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JDM601_1303 atpB; ATP synthase a chain AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:mjd03000]
D JDM601_1320 alkA; Ada regulatory protein AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JDM601_1964 oxyR; hydrogen peroxide-inducible genes activator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D JDM601_4061 oxyR; hydrogen peroxide-inducible genes activator OxyR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D JDM601_0726 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D JDM601_2325 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D JDM601_1469 AcrR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D JDM601_4172 ethR; TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator
D JDM601_2240 transcriptional regulatory protein K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase
D JDM601_0417 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D JDM601_3866 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D JDM601_4233 transcriptional regulator TetR family K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D JDM601_4244 TetR family transcriptional regulator K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D JDM601_3714 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D JDM601_3351 transcriptional regulator K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system
D JDM601_0341 hspR; heat shock protein transcriptional repressor HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D JDM601_3068 hspR; heat shock protein transcriptional repressor HspR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D JDM601_1568 zur; Zinc uptake regulation protein Zur K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JDM601_3954 regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D JDM601_1007 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D JDM601_1569 ArsR family transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
D JDM601_1078 transcriptional regulatory protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D JDM601_0455 transcriptional regulatory protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator
D JDM601_2494 transcriptional regulatory protein K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D JDM601_2453 ideR; iron-dependent repressor and activator IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D JDM601_2539 sirR; transcriptional repressor SirR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JDM601_1941 transcriptional regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D JDM601_3036 birA; bifunctional protein BirA biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JDM601_4161 conserved hypothetical protein K27097 espR; ESX-1-secreted protein regulator
D JDM601_2932 whiB1; transcriptional regulatory protein Whib-like WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JDM601_3009 whiB2; transcriptional regulatory protein Whib-like WhiB2 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JDM601_3227 whiB1; transcriptional regulatory protein Whib-like WhiB1 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JDM601_3960 whiB4; transcriptional regulatory protein Whib-like WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JDM601_0038 whiB5; transcriptional regulatory protein Whib-like protein K18956 whiB5; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JDM601_2911 whiB7; transcriptional regulatory protein Whib-like WhiB7 K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JDM601_0158 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D JDM601_4341 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDM601_3875 transcriptional regulatory protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D JDM601_1835 argR; arginine repressor ArgR K03402 argR; transcriptional regulator of arginine metabolism
D JDM601_1549 hrcA; heat shock protein transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D JDM601_2729 tena/thi-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D JDM601_0689 putative regulatory protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D JDM601_2316 pyrR; pyrimidine operon regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JDM601_4326 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D JDM601_2457 membrane-associated regulatory protein K07738 nrdR; transcriptional repressor NrdR
D JDM601_1734 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:mjd03021]
D JDM601_0789 ercc3; DNA helicase Ercc3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JDM601_3280 rpoA; DNA-directed RNA polymerase (alpha chain) RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDM601_0682 rpoB; DNA-directed RNA polymerase beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDM601_0683 rpoC; DNA-directed RNA polymerase beta chain RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDM601_2306 rpoZ; DNA-directed RNA polymerase (omega chain) RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JDM601_2444 sigB; RNA polymerase sigma factor SigB K03086 rpoD; RNA polymerase primary sigma factor
D JDM601_2452 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D JDM601_0960 sigJ; alternative RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDM601_0986 sigC; RNA polymerase sigma factor SigC K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDM601_1195 sigE; alternative RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDM601_1764 sigL; alternative RNA polymerase sigma factor (RpoE) SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDM601_1766 sigL; alternative RNA polymerase sigma factor (RpoE) SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDM601_2937 sigH; alternative RNA polymerase sigma-E factor (sigma-24) SigH (RpoE) K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDM601_3149 sigJ; alternative RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDM601_4335 sigM; alternative RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JDM601_3105 sigF; alternative RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
D JDM601_2565 nusA; N utilization substance protein a NusA K02600 nusA; transcription termination/antitermination protein NusA
D JDM601_2328 nusB; N utilization substance protein NusB K03625 nusB; transcription antitermination protein NusB
D JDM601_0662 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JDM601_1026 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JDM601_2810 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JDM601_1296 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:mjd03019]
D JDM601_1463 rne; ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12]
D JDM601_2657 rnc; ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDM601_2502 hydrolase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JDM601_1394 orn; oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JDM601_1220 deaD; cold-shock DEAD-box protein DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDM601_3678 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM601_0988 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM601_2535 gpsI; bifunctional protein polyribonucleotide nucleotidyltransferase GpsI K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JDM601_1296 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JDM601_0338 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D JDM601_0431 groEL; 60 kDa chaperonin 2 GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_3237 groEL; 60 kDa chaperone (GroEL1) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_2687 ppk; polyphosphate kinase Ppk K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JDM601_2968 pvdS; transcriptional regulatory protein PvdS K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D JDM601_4166 menG; s-adenosylmethionine:2-demethylmenaquinone methyltransferase MenG K02553 rraA; regulator of ribonuclease activity A
D JDM601_2281 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D JDM601_2114 helY; ATP-dependent DNA helicase HelY K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D JDM601_2075 HrpA-like helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:mjd03011]
D JDM601_1805 rpsA; ribosomal protein S1 RpsA K02945 RP-S1; small subunit ribosomal protein S1
D JDM601_2611 rpsB; 30S ribosomal protein S2 RpsB K02967 RP-S2; small subunit ribosomal protein S2
D JDM601_3332 rpsC; 30S ribosomal protein S3 RpsC K02982 RP-S3; small subunit ribosomal protein S3
D JDM601_3281 rpsD; 30S ribosomal protein S4 RpsD K02986 RP-S4; small subunit ribosomal protein S4
D JDM601_3315 rpsE; 30S ribosomal protein S5 RpsE K02988 RP-S5; small subunit ribosomal protein S5
D JDM601_4308 rpsF; 30S ribosomal protein S6 RpsF K02990 RP-S6; small subunit ribosomal protein S6
D JDM601_0695 rpsG; 30S ribosomal protein S7 RpsG K02992 RP-S7; small subunit ribosomal protein S7
D JDM601_3318 rpsH; 30S ribosomal protein S8 RpsH K02994 RP-S8; small subunit ribosomal protein S8
D JDM601_3268 rpsI; ribosomal protein S9 RpsI K02996 RP-S9; small subunit ribosomal protein S9
D JDM601_3339 rpsJ; 30S ribosomal protein S10 RpsJ K02946 RP-S10; small subunit ribosomal protein S10
D JDM601_3282 rpsK; 30S ribosomal protein S11 RpsK K02948 RP-S11; small subunit ribosomal protein S11
D JDM601_0694 rpsL; 30S ribosomal protein S12 RpsL K02950 RP-S12; small subunit ribosomal protein S12
D JDM601_3283 rpsM; 30S ribosomal protein S13 RpsM K02952 RP-S13; small subunit ribosomal protein S13
D JDM601_3319 rpsN; 30S ribosomal protein S14 RpsN K02954 RP-S14; small subunit ribosomal protein S14
D JDM601_2537 rpsO; 30S ribosomal protein S15 RpsO K02956 RP-S15; small subunit ribosomal protein S15
D JDM601_2631 rpsP; 30S ribosomal protein S16 RpsP K02959 RP-S16; small subunit ribosomal protein S16
D JDM601_3329 rpsQ; 30S ribosomal protein S17 RpsQ K02961 RP-S17; small subunit ribosomal protein S17
D JDM601_4306 rpsR; 30S ribosomal protein S18-1 RpsR1 K02963 RP-S18; small subunit ribosomal protein S18
D JDM601_3334 rpsS; 50S ribosomal protein S19 RpsS K02965 RP-S19; small subunit ribosomal protein S19
D JDM601_1503 rpsT; 30S ribosomal protein S20 RpsT K02968 RP-S20; small subunit ribosomal protein S20
D JDM601_0664 rplA; 50S ribosomal protein L1 RplA K02863 RP-L1; large subunit ribosomal protein L1
D JDM601_3335 rplB; 50S ribosomal protein L2 RplB K02886 RP-L2; large subunit ribosomal protein L2
D JDM601_3338 rplC; 50S ribosomal protein L3 RplC K02906 RP-L3; large subunit ribosomal protein L3
D JDM601_3337 rplD; 50S ribosomal protein L4 RplD K02926 RP-L4; large subunit ribosomal protein L4
D JDM601_3320 rplE; 50S ribosomal protein L5 RplE K02931 RP-L5; large subunit ribosomal protein L5
D JDM601_3317 rplF; 50S ribosomal protein L6 RplF K02933 RP-L6; large subunit ribosomal protein L6
D JDM601_4305 rplI; 50S ribosomal protein L9 RplI K02939 RP-L9; large subunit ribosomal protein L9
D JDM601_0677 rplJ; 50S ribosomal protein L10 RplJ K02864 RP-L10; large subunit ribosomal protein L10
D JDM601_0663 rplK; 50S ribosomal protein L11 RplK K02867 RP-L11; large subunit ribosomal protein L11
D JDM601_0678 rplL; 50S ribosomal protein L7/L12 RplL K02935 RP-L7; large subunit ribosomal protein L7/L12
D JDM601_3269 rplM; 50S ribosomal protein L13 RplM K02871 RP-L13; large subunit ribosomal protein L13
D JDM601_3322 rplN; 50S ribosomal protein L14 RplN K02874 RP-L14; large subunit ribosomal protein L14
D JDM601_3313 rplO; 50S ribosomal protein L15 RplO K02876 RP-L15; large subunit ribosomal protein L15
D JDM601_3331 rplP; 50S ribosomal protein L16 RplP K02878 RP-L16; large subunit ribosomal protein L16
D JDM601_3279 rplQ; 50S ribosomal protein L17 RplQ K02879 RP-L17; large subunit ribosomal protein L17
D JDM601_3316 rplR; 50S ribosomal protein L18 RplR K02881 RP-L18; large subunit ribosomal protein L18
D JDM601_2626 rplS; 50S ribosomal protein L19 RplS K02884 RP-L19; large subunit ribosomal protein L19
D JDM601_1822 rplT; 50S ribosomal protein L20 RplT K02887 RP-L20; large subunit ribosomal protein L20
D JDM601_1464 rplU; 50S ribosomal protein L21 RplU K02888 RP-L21; large subunit ribosomal protein L21
D JDM601_3333 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JDM601_3336 rplW; 50S ribosomal protein L23 RplW K02892 RP-L23; large subunit ribosomal protein L23
D JDM601_3321 rplX; 50S ribosomal protein L24 RplX K02895 RP-L24; large subunit ribosomal protein L24
D JDM601_1466 rpmA; 50S ribosomal protein L27 RpmA K02899 RP-L27; large subunit ribosomal protein L27
D JDM601_2679 rpmB; 50S ribosomal protein L28 RpmB2_1 K02902 RP-L28; large subunit ribosomal protein L28
D JDM601_3330 rpmC; 50S ribosomal protein L29 RpmC K02904 RP-L29; large subunit ribosomal protein L29
D JDM601_3314 rpmD; 50S ribosomal protein L30 RpmD K02907 RP-L30; large subunit ribosomal protein L30
D JDM601_1297 rpmE; 50S ribosomal protein L31 RpmE K02909 RP-L31; large subunit ribosomal protein L31
D JDM601_0931 rpmF; 50S ribosomal protein L32 RpmF K02911 RP-L32; large subunit ribosomal protein L32
D JDM601_0657 rpmG; 50S ribosomal protein L33 type 2 RpmG2 K02913 RP-L33; large subunit ribosomal protein L33
D JDM601_4346 rpmH; 50S ribosomal protein L34 RpmH K02914 RP-L34; large subunit ribosomal protein L34
D JDM601_1821 rpmI; 50S ribosomal protein L35 RpmL K02916 RP-L35; large subunit ribosomal protein L35
D JDM601_3284 rpmJ; 50S ribosomal protein L36 RpmJ K02919 RP-L36; large subunit ribosomal protein L36
D JDM601_0972 rplY; 50S ribosomal protein L25 RplY K02897 RP-L25; large subunit ribosomal protein L25
D JDM601_rRNA01 rpmG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM601_rRNA02 rplK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM601_rRNA03 rplA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM601_rRNA04 rplJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM601_rRNA05 rplL; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM601_rRNA06 rpsL; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:mjd03009]
D JDM601_2657 rnc; ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDM601_1394 orn; oligoribonuclease Orn K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JDM601_1557 era; GTP-binding protein Era K03595 era; GTPase
D JDM601_1467 obgE; GTP1/OBGfamily GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D JDM601_2565 nusA; N utilization substance protein a NusA K02600 nusA; transcription termination/antitermination protein NusA
D JDM601_2328 nusB; N utilization substance protein NusB K03625 nusB; transcription antitermination protein NusB
D JDM601_0662 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JDM601_0966 ksgA; dimethyladenosine transferase KsgA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JDM601_2291 fmu; Fmu protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JDM601_2669 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JDM601_1551 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JDM601_1735 mraW; methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JDM601_0959 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JDM601_1850 tlyA; cytotoxin/hemolysin TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D JDM601_3870 tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JDM601_2597 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JDM601_3120 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JDM601_1863 pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JDM601_2184 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JDM601_0943 rimJ; ribosomal-protein-alanine acetyltransferase RimJ K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D JDM601_2629 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D JDM601_1463 rne; ribonuclease E Rne K08300 rne; ribonuclease E [EC:3.1.26.12]
D JDM601_2340 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JDM601_1220 deaD; cold-shock DEAD-box protein DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JDM601_2964 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JDM601_1865 engA; GTP-binding protein EngA K03977 engA; GTPase
D JDM601_2467 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D JDM601_1300 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JDM601_2370 relA; GTP pyrophosphokinase RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JDM601_2562 rbfA; ribosome-binding factor a RbfA K02834 rbfA; ribosome-binding factor A
D JDM601_2566 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D JDM601_1488 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D JDM601_1555 metal-dependent hydrolase K07042 ybeY; probable rRNA maturation factor
D JDM601_1062 GTP binding protein K06942 ychF; ribosome-binding ATPase
D JDM601_2658 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:mjd03016]
D JDM601_1504 metal-dependent hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D JDM601_4331 pcnA; poly(a) polymerase PcnA K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D JDM601_2694 gltX; glutamyl-tRNA synthetase GltS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDM601_2569 proS; prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JDM601_2190 ileS; isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JDM601_4322 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDM601_0963 metS; methionyl-tRNA synthetase MetS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JDM601_1291 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDM601_3888 lysS; lysyl-tRNA synthetase 1 LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JDM601_2355 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDM601_2341 alaS; alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JDM601_1570 glyS; glycyl-tRNA synthetase GlyS K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JDM601_2397 thrS; threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JDM601_4143 serS; seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JDM601_3871 cysS; cysteinyl-tRNA synthetase 1 CysS1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JDM601_1459 valS; valyl-tRNA synthetase protein ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JDM601_2367 hisS; histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JDM601_1827 pheS; phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JDM601_1828 pheT; phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JDM601_1847 tyrS; tyrosyl-tRNA synthase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDM601_3159 trpS; tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JDM601_1991 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D JDM601_1232 Hit-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JDM601_1781 RNA methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D JDM601_0171 trmB; S-adenosylmethionine-dependent tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JDM601_3278 truA; pseudouridine synthase a TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JDM601_2549 truB; tRNA pseudouridine synthase B TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JDM601_2742 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM601_1300 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JDM601_2469 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JDM601_0268 thiamine-monophosphate kinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D JDM601_1281 cysQ_1; monophosphatase CysQ_1 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JDM601_1771 cysQ; monophosphatase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D JDM601_4345 rnpA; ribonuclease P protein component RnpA K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JDM601_1343 rph; ribonuclease RphA K00989 rph; ribonuclease PH [EC:2.7.7.56]
D JDM601_2426 conserved hypothetical protein K03684 rnd; ribonuclease D [EC:3.1.13.5]
D JDM601_1431 ATP-binding component of an ABC transporter K06020 ettA; energy-dependent translational throttle protein EttA
D JDM601_4033 cytidine/deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JDM601_2476 miaB; 2-methylthioadenine synthetase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JDM601_2627 trmD; tRNA (guanine-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JDM601_3202 spoU; tRNA/rRNA methyltransferase SpoU K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D JDM601_1824 tsnR; 23S rRNA methyltransferase TsnR K03437 spoU; RNA methyltransferase, TrmH family
D JDM601_3120 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JDM601_2741 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JDM601_3549 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D JDM601_3907 mesJ; cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JDM601_3240 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JDM601_3239 gcp; O-sialoglycoprotein endopeptidase Gcp (glycoprotease) K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JDM601_3241 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JDM601_2535 gpsI; bifunctional protein polyribonucleotide nucleotidyltransferase GpsI K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:mjd03012]
D JDM601_2563 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JDM601_1820 infC; initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3
D JDM601_2610 tsf; elongation factor Tsf K02357 tsf; elongation factor Ts
D JDM601_0697 tuf; iron-regulated elongation factor EF-Tu Tuf K02358 tuf; elongation factor Tu
D JDM601_0696 fusA1; elongation factor G FusA1 K02355 fusA; elongation factor G
D JDM601_4185 fusA2; elongation factor G FusA2 K02355 fusA; elongation factor G
D JDM601_0266 selB; selenocysteine-specific translation elongation factor SelB K03833 selB; selenocysteine-specific elongation factor
D JDM601_1298 prfA; peptide chain release factor 1 PrfA K02835 prfA; peptide chain release factor 1
D JDM601_2599 frr; ribosome recycling factor Frr K02838 frr; ribosome recycling factor
D JDM601_1299 hemK; modification methylase HemK K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JDM601_3071 methylase putative K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D JDM601_0971 pth; peptidyl-tRNA hydrolase Pth K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JDM601_3285 infA; translation initiation factor IF-1 InfA K02518 infA; translation initiation factor IF-1
D JDM601_2329 efp; elongation factor P Efp K02356 efp; elongation factor P
D JDM601_2845 prfB; peptide chain release factor 2 PrfB K02836 prfB; peptide chain release factor 2
D JDM601_0639 fusA1; elongation factor G FusA1 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:mjd03110]
D JDM601_0346 clpB; endopeptidase ATP binding protein (chain B) ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JDM601_3885 clpC1; ATP-dependent protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JDM601_1450 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JDM601_1596 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D JDM601_0338 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D JDM601_0431 groEL; 60 kDa chaperonin 2 GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_3237 groEL; 60 kDa chaperone (GroEL1) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_0340 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JDM601_1550 dnaJ2; chaperone protein DnaJ2 K03686 dnaJ; molecular chaperone DnaJ
D JDM601_0339 grpE; GrpE protein (Hsp-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D JDM601_0238 hsp; heat shock protein Hsp (heat-stress-induced ribosome-binding protein A) K13993 HSP20; HSP20 family protein
D JDM601_3067 molecular chaperone (small heat shock protein) K13993 HSP20; HSP20 family protein
D JDM601_3238 groES; 10 kDa chaperone (GroES) K04078 groES; chaperonin GroES
D JDM601_0605 pepA; serine protease PepA K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM601_1197 htrA; serine protease HtrA (DegP protein) K04771 degP; serine protease Do [EC:3.4.21.107]
D JDM601_3899 ftsH; membrane-bound protease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JDM601_1303 atpB; ATP synthase a chain AtpB K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JDM601_1173 conserved hypothetical protein K19777 hdeA; acid stress chaperone HdeA
D JDM601_3234 conserved hypothetical protein K19777 hdeA; acid stress chaperone HdeA
D JDM601_0049 mycP2; alanine and proline rich membrane-anchored mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_0299 mycP3; membrane-anchored mycosin MycP3 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_1899 mycP5; proline rich membrane-anchored mycosin MycP5 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_3275 mycP4; membrane-anchored serine protease (mycosin) MycP4 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_0010 ppiA; iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JDM601_2369 ppiB; peptidyl-prolyl cis-trans isomerase B PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D JDM601_4338 trxC; thioredoxin TrxC K03671 TXN; thioredoxin
D JDM601_1327 thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:mjd04131]
D JDM601_1462 ndk; nucleoside diphosphate kinase NdkA K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JDM601_4160 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D JDM601_1719 conserved hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JDM601_2276 gap; glyceraldehyde 3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDM601_0477 gpmA; phosphoglycerate mutase 1 Gpm1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JDM601_2128 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDM601_1596 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D JDM601_1397 integral membrane leucine and alanine rich protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:mjd04121]
D JDM601_1794 conserved hypothetical protein K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:mjd03051]
D JDM601_1596 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D JDM601_1796 prcA; proteasome (alpha subunit) PrcA K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D JDM601_1795 prcB; proteasome (beta subunit) PrcB K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D JDM601_1786 ATPase K13527 mpa; proteasome-associated ATPase
D JDM601_2120 conserved hypothetical protein K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D JDM601_2119 conserved hypothetical protein K13572 pafB; proteasome accessory factor B
D JDM601_2118 conserved hypothetical protein K13573 pafC; proteasome accessory factor C
D JDM601_1791 conserved hypothetical protein K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:mjd03032]
D JDM601_2689 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D JDM601_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JDM601_4304 dnaB; replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JDM601_1575 dnaG; DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D JDM601_1430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDM601_4307 ssb; single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D JDM601_2180 dnaE; DNA polymerase III alpha subunit DnaE1 K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM601_0002 dnaN; DNA polymerase III (beta chain) DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM601_1502 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM601_3929 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM601_1711 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_3994 dnaQ; DNA polymerase III (epsilon subunit) DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_4010 dnaZX; DNA polymerase III (subunit gamma/tau) DnaZX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM601_1666 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73]
D JDM601_2624 rnhB; ribonuclease HII protein RnhB K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JDM601_1802 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM601_2737 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JDM601_0006 gyrA; DNA gyrase (subunit A) GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JDM601_0026 gyrA; DNA gyrase (subunit A) GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JDM601_0005 gyrB; DNA gyrase (subunit B) GyrB K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JDM601_0027 gyrB; DNA gyrase (subunit B) GyrB K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JDM601_1881 conserved hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JDM601_3931 topA; DNA topoisomerase I TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:mjd03036]
D JDM601_2657 rnc; ribonuclease III Rnc K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JDM601_3887 lsr2; iron-regulated Lsr2 protein precursor K26249 lsr2; nucleoid-associated protein Lsr2
D JDM601_2689 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D JDM601_0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JDM601_2648 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein
D JDM601_1861 conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D JDM601_1862 transcriptional regulator K06024 scpB; segregation and condensation protein B
D JDM601_2842 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JDM601_1737 pbpB; penicillin-binding membrane protein PbpB K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JDM601_0767 conserved hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JDM601_2499 ftsK; cell division transmembrane protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JDM601_2819 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JDM601_1745 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D JDM601_0018 rodA; cell division protein RodA K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_1742 ftsW; FtsW-like protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_2841 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JDM601_1746 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDM601_2416 conserved hypothetical protein K06916 zapE; cell division protein ZapE
D JDM601_4005 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM601_4030 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM601_4340 hydrolase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D JDM601_1748 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D JDM601_1860 Soj family ATPase K03496 parA; chromosome partitioning protein
D JDM601_2928 Soj/ParA-related protein K03496 parA; chromosome partitioning protein
D JDM601_4342 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D JDM601_4341 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JDM601_2614 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D JDM601_1857 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D JDM601_1199 mrp; Mrp-related protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JDM601_2279 whiA; transcriptional regulatory protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:mjd03400]
D JDM601_1319 ogt; methylated-DNA-protein-cysteine methyltransferase Ogt K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JDM601_2680 ung; uracil-DNA glycosylase Ung K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM601_1846 mpg; 3-methyladenine DNA glycosylase Mpg K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JDM601_3882 mutY; adenine glycosylase MutY K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JDM601_3952 nth; endonuclease III Nth K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D JDM601_0789 ercc3; DNA helicase Ercc3 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JDM601_0384 mutT3; mutator protein MutT3 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JDM601_1148 mutT2; mutator protein MutT2 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JDM601_2439 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase DutT K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JDM601_1228 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM601_1365 glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM601_3073 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JDM601_1320 alkA; Ada regulatory protein AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JDM601_1185 tagA; DNA-3-methyladenine glycosylase I TagA K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JDM601_0890 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JDM601_2656 fpg; formamidopyrimidine-DNA glycosylase Fpg K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JDM601_1444 formamidopyrimidine-DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JDM601_3116 nei; endonuclease VIII Nei K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JDM601_0401 xthA; exodeoxyribonuclease III protein XthA K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D JDM601_0685 end; endonuclease IV (apurinase) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D JDM601_2737 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JDM601_1802 polA; DNA polymerase I PolA K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JDM601_1814 uvrA; excinuclease ABC (subunit A-DNA-binding ATPase) UvrA K03701 uvrA; excinuclease ABC subunit A
D JDM601_1809 uvrB; excinuclease ABC (subunit B-helicase) UvrB K03702 uvrB; excinuclease ABC subunit B
D JDM601_2282 uvrC; excinuclease ABC (subunit c-nuclease) UvrC K03703 uvrC; excinuclease ABC subunit C
D JDM601_0894 uvrD1; ATP-dependent DNA helicase II UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_2912 uvrD2; ATP-dependent DNA helicase II UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_2916 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JDM601_0682 rpoB; DNA-directed RNA polymerase beta subunit RpoB K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JDM601_0683 rpoC; DNA-directed RNA polymerase beta chain RpoC K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JDM601_3280 rpoA; DNA-directed RNA polymerase (alpha chain) RpoA K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JDM601_2306 rpoZ; DNA-directed RNA polymerase (omega chain) RpoZ K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JDM601_0983 mfd; transcription-repair coupling factor Mfd (TrcF) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JDM601_1058 xseA; exodeoxyribonuclease VII (large subunit) XseA K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JDM601_1057 exodeoxyribonuclease K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JDM601_2180 dnaE; DNA polymerase III alpha subunit DnaE1 K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JDM601_0002 dnaN; DNA polymerase III (beta chain) DnaN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JDM601_1502 holA; DNA polymerase III delta subunit HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JDM601_3929 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JDM601_1711 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_3994 dnaQ; DNA polymerase III (epsilon subunit) DnaQ K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JDM601_4010 dnaZX; DNA polymerase III (subunit gamma/tau) DnaZX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JDM601_1430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDM601_4307 ssb; single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D JDM601_0643 recB; exodeoxyribonuclease V (beta chain) RecB K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D JDM601_0644 recC; exodeoxyribonuclease V (gamma chain) RecC K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D JDM601_0642 recD; exodeoxyribonuclease V (alpha chain) RecD K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D JDM601_2483 RecA protein K03553 recA; recombination protein RecA
D JDM601_2379 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JDM601_2378 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JDM601_2380 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JDM601_2297 priA; primosomal protein N' PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JDM601_3878 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JDM601_0003 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JDM601_2677 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JDM601_1563 recO; recombination protein O RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JDM601_4003 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JDM601_1852 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JDM601_1395 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D JDM601_0881 ATP dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D JDM601_3038 putative DNA ligase-like protein K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D JDM601_0006 gyrA; DNA gyrase (subunit A) GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JDM601_0026 gyrA; DNA gyrase (subunit A) GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JDM601_0005 gyrB; DNA gyrase (subunit B) GyrB K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JDM601_0027 gyrB; DNA gyrase (subunit B) GyrB K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JDM601_1881 conserved hypothetical protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JDM601_3931 topA; DNA topoisomerase I TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JDM601_2689 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D JDM601_3678 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JDM601_2188 dinP_1; DNA polymerase IV DinP_1 K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JDM601_2459 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JDM601_3216 conserved hypothetical protein K14161 imuB; protein ImuB
D JDM601_3205 dnaE2; DNA polymerase III alpha chain DnaE2 K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D JDM601_2482 recX; regulatory protein RecX K03565 recX; regulatory protein
D JDM601_1332 dinG; ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D JDM601_3115 lhr; ATP-dependent helicase Lhr K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D JDM601_2688 mutT1; hydrolase MutT1 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D JDM601_1856 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D JDM601_2787 nrdE; ribonucleoside-diphosphate reductase (alpha chain) NrdE K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JDM601_0215 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM601_2780 nrdF; ribonucleoside-diphosphate reductase (beta chain) NrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JDM601_2561 conserved hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:mjd03029]
D JDM601_2563 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JDM601_1820 infC; initiation factor IF-3 InfC K02520 infC; translation initiation factor IF-3
D JDM601_2610 tsf; elongation factor Tsf K02357 tsf; elongation factor Ts
D JDM601_0697 tuf; iron-regulated elongation factor EF-Tu Tuf K02358 tuf; elongation factor Tu
D JDM601_0696 fusA1; elongation factor G FusA1 K02355 fusA; elongation factor G
D JDM601_4185 fusA2; elongation factor G FusA2 K02355 fusA; elongation factor G
D JDM601_1557 era; GTP-binding protein Era K03595 era; GTPase
D JDM601_1847 tyrS; tyrosyl-tRNA synthase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JDM601_4322 leuS; leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JDM601_2355 aspS; aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JDM601_1570 glyS; glycyl-tRNA synthetase GlyS K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JDM601_1291 argS; arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JDM601_2702 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JDM601_2734 gatA; glutamyl-tRNA (Gln) amidotransferase (subunit A) GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JDM601_2728 gatB; glutamyl-tRNA(Gln) amidotransferase (subunit B) GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JDM601_2735 gatC; glutamyl-tRNA(Gln) amidotransferase (subunit C) GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JDM601_1430 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JDM601_4307 ssb; single-strand binding protein Ssb K03111 ssb; single-strand DNA-binding protein
D JDM601_0338 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D JDM601_0339 grpE; GrpE protein (Hsp-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D JDM601_0431 groEL; 60 kDa chaperonin 2 GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_3237 groEL; 60 kDa chaperone (GroEL1) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_3238 groES; 10 kDa chaperone (GroES) K04078 groES; chaperonin GroES
D JDM601_0340 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JDM601_1550 dnaJ2; chaperone protein DnaJ2 K03686 dnaJ; molecular chaperone DnaJ
D JDM601_2742 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JDM601_1199 mrp; Mrp-related protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JDM601_2265 ctaB; cytochrome C oxidase assembly factor CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D JDM601_2260 antibiotic ABC transporter transmembrane protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JDM601_4344 transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM601_1596 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:mjd02000]
D JDM601_1535 transmembrane ATP-binding protein ABC transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D JDM601_1536 transmembrane ATP-binding protein ABC transporter K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D JDM601_1237 transmembrane ATP-binding protein ABC transporter K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JDM601_1236 transmembrane ATP-binding protein ABC transporter K24820 K24820; ATP-binding cassette, subfamily B, fatty acid transporter
D JDM601_0824 drug-transport transmembrane ATP-binding protein ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JDM601_0825 transmembrane ATP-binding protein ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JDM601_3642 transmembrane ATP-binding protein ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JDM601_1915 drug-transport transmembrane ATP-binding protein ABC transporter K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D JDM601_1840 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D JDM601_3196 transmembrane ATP-binding protein ABC transporter K21397 K21397; ABC transport system ATP-binding/permease protein
D JDM601_1512 subI; sulfate-binding lipoprotein SubI K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D JDM601_1513 cysT; sulfate-transport integral membrane protein ABC transporter CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D JDM601_1514 cysW; sulfate-transport integral membrane protein ABC transporter CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D JDM601_1515 cysA1; sulfate-transport ATP-binding protein ABC transporter CysA1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D JDM601_1945 modA; molybdate-binding lipoprotein ModA K02020 modA; molybdate transport system substrate-binding protein
D JDM601_1946 modB; molybdenum-transport integral membrane protein ABC transporter ModB K02018 modB; molybdate transport system permease protein
D JDM601_1947 modC; molybdenum-transport ATP-binding protein ABC transporter ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D JDM601_2323 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JDM601_2322 ABC transporter permease protein K15554 ssuC; sulfonate transport system permease protein
D JDM601_2321 conserved hypothetical protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JDM601_1209 sugC; sugar-transport ATP-binding protein ABC transporter SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JDM601_2084 sugar-transport ATP-binding protein ABC transporter K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JDM601_1206 lpqY; sugar-binding lipoprotein LpqY K10236 thuE; trehalose/maltose transport system substrate-binding protein
D JDM601_1207 sugA; sugar-transport integral membrane protein ABC transporter SugA K10237 thuF; trehalose/maltose transport system permease protein
D JDM601_1208 sugB; sugar-transport integral membrane protein ABC transporter SugB K10238 thuG; trehalose/maltose transport system permease protein
D JDM601_0122 mce1A; MCE-family protein Mce1A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0123 mce1B; MCE-family protein Mce1B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0124 mce1C; MCE-family protein Mce1C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0125 mce1D; MCE-family protein Mce1D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0126 lprK; MCE family lipoprotein LprK K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0127 mce1F; MCE-family protein Mce1F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0135 mce5F; Mce family protein Mce5F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0136 mce5E; Mce family protein Mce5E K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0137 mce5D; MCE-family protein Mce5D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0138 mce5C; Mce family protein Mce5C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0139 mce5B; Mce family protein Mce5B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0140 mce5A; Mce family protein Mce5A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1096 mce5F; Mce family protein Mce5F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1097 mce6E; MCE family lipoprotein Mce6E K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1098 mce6D; MCE-family protein Mce6D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1099 mce6C; MCE-family protein Mce6C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1100 mce5B; Mce family protein Mce5B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_1101 mce5A; Mce protein Mce5A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2893 mce5A; Mce protein Mce5A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2894 mce5B; Mce family protein Mce5B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2895 mce6C; MCE-family protein Mce6C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2896 mce5D; MCE-family protein Mce5D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2897 mce6E; MCE family lipoprotein Mce6E K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_2898 mce5F; Mce family protein Mce5F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3468 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3469 lprM_1; MCE family lipoprotein LprM K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3470 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3471 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3472 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3473 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3625 mce4F; MCE-family protein Mce4F K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3626 lprN; MCE family lipoprotein LprN K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3627 mce4D; MCE-family protein Mce4D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3628 mce4C; MCE-family protein Mce4C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3629 mce4B; MCE-family protein Mce4B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3630 mce4A; MCE-family protein Mce4A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3790 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3791 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3792 putative Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3793 mce6C; MCE-family protein Mce6C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3794 mce1B; MCE-family protein Mce1B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_3795 conserved hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4280 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4281 virulence factor Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4282 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4283 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4284 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_4285 MCE-family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D JDM601_0120 yrbE1A; integral membrane protein YrbE1A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0121 yrbE1B; integral membrane protein YrbE1B K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0141 integral ABC-type transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0142 yrbE5A; YrbE family protein YrbE5A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0710 yrbE4A; integral membrane protein YrbE4a K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0711 yrbE4B; integral membrane protein YrbE4b K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_1102 integral ABC-type transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_1103 yrbE5A; YrbE family protein YrbE5A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_2891 yrbE5A; YrbE family protein YrbE5A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_2892 integral ABC-type transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_3631 yrbE4B; membrane protein YrbE4B K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_3632 yrbE4A; membrane protein YrbE4A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_3796 yrbE4B; integral membrane protein YrbE4b K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_3797 yrbE6A; integral membrane protein YrbE6A K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_4286 yrbE4B; integral membrane protein YrbE4b K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_4287 yrbE4A; integral membrane protein YrbE4a K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D JDM601_0681 mkl; ribonucleotide-transport ATP-binding protein ABC transporter Mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D JDM601_0128 Mce associated membrane protein K18481 mas; Mce-associated membrane protein
D JDM601_0129 Mce associated transmembrane protein K18481 mas; Mce-associated membrane protein
D JDM601_0130 Mce associated protein K18481 mas; Mce-associated membrane protein
D JDM601_0131 Mce associated membrane protein K18481 mas; Mce-associated membrane protein
D JDM601_0134 conserved hypothetical protein K18481 mas; Mce-associated membrane protein
D JDM601_0144 conserved hypothetical protein K18481 mas; Mce-associated membrane protein
D JDM601_1074 Mce associated membrane protein K18481 mas; Mce-associated membrane protein
D JDM601_1075 Mce associated membrane protein K18481 mas; Mce-associated membrane protein
D JDM601_1095 Mce associated membrane protein K18481 mas; Mce-associated membrane protein
D JDM601_1520 conserved hypothetical protein K18481 mas; Mce-associated membrane protein
D JDM601_2899 Mce associated membrane protein K18481 mas; Mce-associated membrane protein
D JDM601_3463 conserved hypothetical protein K18481 mas; Mce-associated membrane protein
D JDM601_3464 Mce associated protein K18481 mas; Mce-associated membrane protein
D JDM601_3623 MCE-associated protein K18481 mas; Mce-associated membrane protein
D JDM601_3624 conserved hypothetical protein K18481 mas; Mce-associated membrane protein
D JDM601_3789 conserved hypothetical protein K18481 mas; Mce-associated membrane protein
D JDM601_4276 conserved hypothetical protein K18481 mas; Mce-associated membrane protein
D JDM601_4277 conserved hypothetical protein K18481 mas; Mce-associated membrane protein
D JDM601_1589 uspC; periplasmic sugar-binding lipoprotein UspC K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JDM601_2087 sugar-binding lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D JDM601_1591 uspA; sugar-transport integral membrane protein ABC transporter UspA K02025 ABC.MS.P; multiple sugar transport system permease protein
D JDM601_2086 ABC-type sugar transport integral membrane protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D JDM601_1590 uspB; sugar-transport integral membrane protein ABC transporter UspB K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JDM601_2085 sugar ABC transporter K02026 ABC.MS.P1; multiple sugar transport system permease protein
D JDM601_3025 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3530 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3534 phoS2; periplasmic phosphate-binding lipoprotein PhoS2 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3538 phoS2_1; periplasmic phosphate-binding lipoprotein PhoS2_1 K02040 pstS; phosphate transport system substrate-binding protein
D JDM601_3531 pstC2; phosphate-transport integral membrane ABC transporter PstC2 K02037 pstC; phosphate transport system permease protein
D JDM601_3537 pstC2_1; phosphate-transport integral membrane ABC transporter PstC2_1 K02037 pstC; phosphate transport system permease protein
D JDM601_3532 pstA1; phosphate-transport integral membrane ABC transporter PstA1 K02038 pstA; phosphate transport system permease protein
D JDM601_3536 pstA; phosphate-transport integral membrane ABC transporter PstA K02038 pstA; phosphate transport system permease protein
D JDM601_3535 phoT; phosphate-transport ATP-binding protein ABC transporter PhoT K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JDM601_2478 glutamate binding protein K10005 gluB; glutamate transport system substrate-binding protein
D JDM601_2479 hypothetical protein K10006 gluC; glutamate transport system permease protein
D JDM601_2480 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D JDM601_2477 glutamine ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D JDM601_1110 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_3805 conserved hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_3831 ABC-type branched-chain amino acid transport systems periplasmic component-like protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JDM601_0382 glnH; glutamine-binding lipoprotein GlnH K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JDM601_4318 glnQ; ABC transporter permease protein GlnQ K02029 ABC.PA.P; polar amino acid transport system permease protein
D JDM601_4319 pstB; phosphate ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JDM601_1274 oppA; periplasmic oligopeptide-binding lipoprotein OppA K13889 gsiB; glutathione transport system substrate-binding protein
D JDM601_1277 oppB; oligopeptide-transport integral membrane protein ABC transporter OppB K13890 gsiC; glutathione transport system permease protein
D JDM601_1276 oppC; oligopeptide-transport integral membrane protein ABC transporter OppC K13891 gsiD; glutathione transport system permease protein
D JDM601_1275 oppD; oligopeptide-transport ATP-binding protein ABC transporter OppD K13892 gsiA; glutathione transport system ATP-binding protein
D JDM601_2372 ABC-type dipeptide transport system periplasmic component K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JDM601_0250 periplasmic iron-transport lipoprotein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JDM601_2774 fecB; FEIII-dicitrate-binding periplasmic lipoprotein FecB K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JDM601_2768 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JDM601_3181 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D JDM601_3182 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D JDM601_3183 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D JDM601_1587 conserved hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D JDM601_1586 transmembrane ATP-binding protein ABC transporter K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JDM601_4083 rfbD; O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD K09690 wzm; homopolymeric O-antigen transport system permease protein
D JDM601_4081 rfbE; O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter RfbE K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D JDM601_1191 tetronasin-transport integral membrane protein ABC transporter K25149 narB; polyether ionophore transport system permease protein
D JDM601_1192 antibiotic ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D JDM601_2841 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D JDM601_2842 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JDM601_1844 antibiotic resistance ABC transporter efflux protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM601_2258 antibiotic ABC transporter transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JDM601_1845 antibiotic resistance ABC transporter efflux system ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM601_2257 antibiotic ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JDM601_0488 ABC transport system integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D JDM601_0515 glutamine-transport transmembrane protein ABC transporter K02004 ABC.CD.P; putative ABC transport system permease protein
D JDM601_0489 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDM601_0514 glutamine-transport ATP-binding protein ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JDM601_2252 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JDM601_2560 dinF; DNA-damage-inducible protein F DinF K26937 dinF; MATE family, multidrug efflux pump
D JDM601_1427 integral membrane transport protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D JDM601_3081 integral membrane transport protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D JDM601_4110 integral membrane transport protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D JDM601_1473 nanT; sialic acid-transport integral membrane protein NanT K08178 JEN; MFS transporter, SHS family, lactate transporter
D JDM601_0242 narK3_2; integral membrane nitrite extrusion protein NarK3_2 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDM601_0245 narK3; integral membrane nitrite extrusion protein NarK3 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDM601_2779 narU; integral membrane nitrite extrusion protein NarU K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D JDM601_2288 aminoglycosides/tetracycline-transport integral membrane protein K27247 K27247; MFS transporter, DHA2 family, triacylglyceride efflux pump
D JDM601_2813 putative transport protein K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein
D JDM601_1397 integral membrane leucine and alanine rich protein K06902 UMF1; MFS transporter, UMF1 family
D JDM601_2225 major intrinsic protein K06188 aqpZ; aquaporin Z
D JDM601_2915 transmembrane cation transporter K10716 kch; voltage-gated potassium channel
D JDM601_3585 K+ transport system NAD-binding component K10716 kch; voltage-gated potassium channel
D JDM601_2233 membrane protein K07114 yfbK; Ca-activated chloride channel homolog
D JDM601_2821 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D JDM601_2829 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D JDM601_0937 mscL; large-conductance ion mechanosensitive channel MscL K03282 mscL; large conductance mechanosensitive channel
D JDM601_2844 transmembrane protein K22044 ybiO; moderate conductance mechanosensitive channel
D JDM601_1211 corA; magnesium and cobalt transport transmembrane protein CorA K03284 corA; magnesium transporter
D JDM601_0867 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D JDM601_0869 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D JDM601_1556 transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDM601_1931 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDM601_1932 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDM601_0819 ompA; outer membrane protein a OmpA K16191 K16191; peptidoglycan-binding protein ArfA
D JDM601_0336 ansP1; L-asparagine permease AnsP1 K11738 ansP; L-asparagine permease
D JDM601_0360 efflux membrane protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JDM601_0168 mmpL3; transmembrane transport protein MmpL3 K20470 mmpL3; trehalose monomycolate/heme transporter
D JDM601_0165 mmpL11; transmembrane transport protein MmpL11 K20466 mmpL11; heme transporter
D JDM601_4057 mmr; multidrug-transport integral membrane protein Mmr K03297 emrE; small multidrug resistance pump
D JDM601_2122 conserved hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D JDM601_4115 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D JDM601_0366 yjcE; integral membrane transport protein K24163 nhaK; monovalent cation/hydrogen antiporter
D JDM601_0375 sodium/hydrogen exchanger (antiporter) K11105 cvrA; potassium/hydrogen antiporter
D JDM601_0376 ceoC1; TRK system potassium uptake protein CeoC1 K03499 trkA; trk/ktr system potassium uptake protein
D JDM601_2433 ceoB; TRK system potassium uptake protein CeoB K03499 trkA; trk/ktr system potassium uptake protein
D JDM601_2435 ceoC; TRK system potassium uptake protein CeoC K03499 trkA; trk/ktr system potassium uptake protein
D JDM601_0874 mntH; divalent cation-transport integral membrane protein MntH K03322 mntH; manganese transport protein
D JDM601_1719 conserved hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D JDM601_3869 arsB2; arsenical pump integral membrane protein ArsB2 K03893 arsB; arsenical pump membrane protein
D JDM601_0914 NADH ubiquinone oxidoreductase subunit 5 K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D JDM601_0915 putative monovalent cation/H+ antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D JDM601_0916 putative monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D JDM601_0917 putative Na(+)/H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D JDM601_0918 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D JDM601_0920 putative monovalent cation/H+ antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D JDM601_4334 transmembrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D JDM601_0169 transmembrane protein K20469 K20469; putative heme transporter
D JDM601_0018 rodA; cell division protein RodA K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_1742 ftsW; FtsW-like protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D JDM601_4160 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D JDM601_2799 cstA; carbon starvation protein CstA K06200 cstA; carbon starvation protein
D JDM601_0525 ccsA; cytochrome C-type biogenesis protein CcsA K06196 ccdA; cytochrome c-type biogenesis protein
D JDM601_1149 respiratory nitrate reductase subunit alpha narG K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_1150 narH; NarH K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_1152 respiratory nitrate reductase subunit gamma NarI K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D JDM601_2076 conserved hypothetical protein K20719 SIGMAR1; sigma non-opioid intracellular receptor
D JDM601_3020 conserved hypothetical protein K27044 pacL1; chaperone-like protein
D JDM601_0167 transmembrane protein K20468 K20468; putative heme transporter
D JDM601_1874 tryptophan-rich sensory protein K05770 TSPO; translocator protein
D JDM601_1909 mgtC; Mg2+ transport p-type ATPase C MgtC K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D JDM601_4164 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:mjd02044]
D JDM601_3941 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JDM601_3940 putative transmembrane protein K12510 tadB; tight adherence protein B
D JDM601_3939 conserved hypothetical protein K12511 tadC; tight adherence protein C
D JDM601_1749 transmembrane protein K02221 yggT; YggT family protein
D JDM601_1500 comEA; membrane protein ComEA K02237 comEA; competence protein ComEA
D JDM601_1501 comEC; membrane metal-binding protein ComEC K02238 comEC; competence protein ComEC
D JDM601_0047 CBXX/CFQX family protein K27084 eccA; ESX secretion system protein EccA
D JDM601_0290 conserved hypothetical protein K27084 eccA; ESX secretion system protein EccA
D JDM601_1901 conserved hypothetical protein K27084 eccA; ESX secretion system protein EccA
D JDM601_0058 conserved hypothetical protein K27085 eccB; ESX secretion system ATPase EccB
D JDM601_0291 conserved hypothetical protein K27085 eccB; ESX secretion system ATPase EccB
D JDM601_1892 conserved hypothetical protein K27085 eccB; ESX secretion system ATPase EccB
D JDM601_0292 conserved hypothetical protein K27086 eccC; ESX secretion system protein EccC
D JDM601_1893 FtsK/SpoIIIE family protein K27086 eccC; ESX secretion system protein EccC
D JDM601_3273 conserved hypothetical protein K27086 eccC; ESX secretion system protein EccC
D JDM601_0050 transmembrane protein K27087 eccD; ESX secretion system protein EccD
D JDM601_0298 transmembrane protein K27087 eccD; ESX secretion system protein EccD
D JDM601_1898 conserved hypothetical protein K27087 eccD; ESX secretion system protein EccD
D JDM601_3274 conserved hypothetical protein K27087 eccD; ESX secretion system protein EccD
D JDM601_0048 conserved hypothetical protein K27088 eccE; ESX secretion system protein EccE
D JDM601_0300 transmembrane protein K27088 eccE; ESX secretion system protein EccE
D JDM601_1900 conserved hypothetical protein K27088 eccE; ESX secretion system protein EccE
D JDM601_3328 conserved hypothetical protein K27088 eccE; ESX secretion system protein EccE
D JDM601_0049 mycP2; alanine and proline rich membrane-anchored mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_0299 mycP3; membrane-anchored mycosin MycP3 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_1899 mycP5; proline rich membrane-anchored mycosin MycP5 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_3275 mycP4; membrane-anchored serine protease (mycosin) MycP4 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-]
D JDM601_0052 conserved hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D JDM601_0297 conserved hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D JDM601_0974 conserved hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D JDM601_1897 conserved hypothetical protein K27091 espG; ESX secretion-associated protein EspG
D JDM601_0053 esxC; ESAT-6 like protein ESXC (ESAT-6 like protein 11) K14956 esx; ESAT-6 family protein
D JDM601_0054 esxD; ESAT-6 like protein EsxD K14956 esx; ESAT-6 family protein
D JDM601_0287 esxG; EsaT-6 like protein EsxG K14956 esx; ESAT-6 family protein
D JDM601_0288 esxH; EsaT-6 like protein EsxH K14956 esx; ESAT-6 family protein
D JDM601_0295 esxG; EsaT-6 like protein EsxG K14956 esx; ESAT-6 family protein
D JDM601_0296 esxH; EsaT-6 like protein EsxH K14956 esx; ESAT-6 family protein
D JDM601_0999 esxN; EsaT-6 like protein EsxN K14956 esx; ESAT-6 family protein
D JDM601_1000 esxP_1; EsaT-6 like protein EsxP_1 K14956 esx; ESAT-6 family protein
D JDM601_1895 esxP_1; EsaT-6 like protein EsxP_1 K14956 esx; ESAT-6 family protein
D JDM601_1896 esxN; EsaT-6 like protein EsxN K14956 esx; ESAT-6 family protein
D JDM601_1903 esxP_1; EsaT-6 like protein EsxP_1 K14956 esx; ESAT-6 family protein
D JDM601_1904 esxN; EsaT-6 like protein EsxN K14956 esx; ESAT-6 family protein
D JDM601_2357 esxN; EsaT-6 like protein EsxN K14956 esx; ESAT-6 family protein
D JDM601_2358 esxP_1; EsaT-6 like protein EsxP_1 K14956 esx; ESAT-6 family protein
D JDM601_3270 esxT; EsaT-6 like protein EsxT K14956 esx; ESAT-6 family protein
D JDM601_3271 conserved hypothetical protein K14956 esx; ESAT-6 family protein
D JDM601_1916 secA2; preprotein translocase ATPase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM601_2971 secA1; preprotein translocase SecA1 1 subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JDM601_2374 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D JDM601_0661 secE; preprotein translocase (tail-anchored membrane protein) SecE K03073 secE; preprotein translocase subunit SecE
D JDM601_2373 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D JDM601_2273 secG; protein-export membrane protein (translocase subunit) SecG K03075 secG; preprotein translocase subunit SecG
D JDM601_3301 secY; preprotein translocase SecY K03076 secY; preprotein translocase subunit SecY
D JDM601_2635 ffh; signal recognition particle protein Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JDM601_2647 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JDM601_2375 yajC; membrane protein secretion factor YajC K03210 yajC; preprotein translocase subunit YajC
D JDM601_4344 transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JDM601_2116 tatA; sec-independent protein translocase membrane-bound protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D JDM601_1198 tatB; protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D JDM601_2115 tatC; sec-independent protein translocase transmembrane protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:mjd02042]
D JDM601_1556 transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDM601_1931 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDM601_1932 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JDM601_1032 hemolysin-like protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:mjd02022]
D JDM601_0478 senX3; two-component sensor histidine kinase SenX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JDM601_0479 regX3; two-component sensory transduction protein RegX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D JDM601_0994 kdpD; two-component system response phosphate sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JDM601_0993 kdpE; transcriptional regulatory protein KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JDM601_0933 mprB; two-component sensor kinase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D JDM601_0932 mprA; two component response transcriptional regulatory protein MprA K07669 mprA; two-component system, OmpR family, response regulator MprA
D JDM601_2985 mtrB; two-component sensory transduction histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JDM601_2986 mtrA; two-component sensory transduction transcriptional regulatory protein MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D JDM601_0822 prrB; two-component sensor histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3]
D JDM601_0823 prrA; two-component response transcriptional regulatory protein PrrA K07671 prrA; two-component system, OmpR family, response regulator PrrA
D JDM601_3928 trcS; two-component sensor histidine kinase TrcS K07656 trcS; two-component system, OmpR family, sensor histidine kinase TrcS [EC:2.7.13.3]
D JDM601_3927 trcR; two-component transcriptional regulator TrcR K07672 trcR; two-component system, OmpR family, response regulator TrcR
D JDM601_2952 two-component regulator - sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JDM601_3613 phoR; two-component system response phosphate sensor kinase PhoR K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JDM601_4041 tcrY; two-component sensor kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JDM601_2953 two-component regulator receiver domain-containing protein K02483 K02483; two-component system, OmpR family, response regulator
D JDM601_3614 phoP; two-component system response phosphate regulon transcriptional regulator PhoP K02483 K02483; two-component system, OmpR family, response regulator
D JDM601_4042 tcrX; two-component transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D JDM601_0912 two-component system sensor kinase K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D JDM601_2979 devS; two-component sensor histidine kinase DevS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D JDM601_2978 devR; two-component transcriptional regulatory protein DevR K07695 devR; two-component system, NarL family, response regulator DevR
D JDM601_2982 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JDM601_3076 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JDM601_2933 sensor kinase from two-component regulatory system K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D JDM601_2121 two-component system transcriptional regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:mjd02035]
D JDM601_2982 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JDM601_3076 conserved hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D JDM601_3941 conserved hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins [BR:mjd03037]
D JDM601_1858 O-methyltransferase K00545 COMT; catechol O-methyltransferase [EC:2.1.1.6]
C 04812 Cytoskeleton proteins [BR:mjd04812]
D JDM601_1746 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDM601_1860 Soj family ATPase K03496 parA; chromosome partitioning protein
D JDM601_2928 Soj/ParA-related protein K03496 parA; chromosome partitioning protein
D JDM601_4342 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein
D JDM601_4341 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:mjd04147]
D JDM601_1596 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D JDM601_0988 eno; enolase Eno K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JDM601_2276 gap; glyceraldehyde 3-phosphate dehydrogenase Gap K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JDM601_2275 pgk; phosphoglycerate kinase Pgk K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JDM601_2128 pykA; pyruvate kinase PykA K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JDM601_0010 ppiA; iron-regulated peptidyl-prolyl cis-trans isomerase A PpiA K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JDM601_0431 groEL; 60 kDa chaperonin 2 GroEL2 K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_3237 groEL; 60 kDa chaperone (GroEL1) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JDM601_0338 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D JDM601_0892 pgi; glucose-6-phosphate isomerase Pgi K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JDM601_3222 guaB3; inosine-5'-monophosphate (imp) dehydrogenase GuaB3 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JDM601_3223 guaB2; inosine-5'-monophosphate (imp) dehydrogenase GuaB2 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JDM601_0697 tuf; iron-regulated elongation factor EF-Tu Tuf K02358 tuf; elongation factor Tu
D JDM601_1232 Hit-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JDM601_1716 fadD15; long-chain-fatty-acid-CoA ligase FadD15 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3414 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3517 acyl-CoA synthetase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3658 fadD4; fatty-acid-CoA ligase FadD4 K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_3839 long-chain fatty-acid CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D JDM601_0226 fadA2; acetyl-CoA acetyltransferase FadA2 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0784 fadA; acyl-CoA thiolase FadA K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_0899 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1020 fadA3; beta-ketoacyl CoA thiolase FadA3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1326 fadA4; acetyl-CoA acetyltransferase FadA4 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_1955 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3370 ltp1_1; lipid-transfer protein Ltp1_1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3396 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3409 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3475 ltp1; lipid-transfer protein Ltp1 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3662 ltp3; lipid carrier protein or keto acyl-CoA thiolase Ltp3 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_3842 beta-ketoacyl CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JDM601_2988 sahH; S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D JDM601_3300 adk; adenylate kinase (ATP-AMP transphosphorylase) Adk K00939 adk; adenylate kinase [EC:2.7.4.3]
D JDM601_2371 apt; adenine phosphoribosyltransferase Apt K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JDM601_1837 argH; argininosuccinate lyase ArgH K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JDM601_1836 argG; argininosuccinate synthase ArgG K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JDM601_0567 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6]
D JDM601_1328 glgB; 14-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JDM601_3863 glgB; 14-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JDM601_3977 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JDM601_1678 glnA2; glutamine synthetase GlnA2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_1682 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_2581 glnA3; glutamine synthetase GlnA3 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_4178 glnA1; glutamine synthetase GlnA1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JDM601_0507 hemB; delta-aminolevulinic acid dehydratase HemB K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JDM601_1146 phhB; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D JDM601_2718 serA1; D-3-phosphoglycerate dehydrogenase SerA1 K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JDM601_0905 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JDM601_1858 O-methyltransferase K00545 COMT; catechol O-methyltransferase [EC:2.1.1.6]
D JDM601_0450 lpd; dihydrolipoamide dehydrogenase Lpd K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JDM601_2748 fixB; electron transfer flavoprotein (alpha-subunit) FixB K03522 fixB; electron transfer flavoprotein alpha subunit
D JDM601_1977 zwf1; glucose-6-phosphate 1-dehydrogenase Zwf1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM601_2269 zwf2; glucose-6-phosphate 1-dehydrogenase Zwf2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JDM601_2274 tpiA; triosephosphate isomerase Tpi K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JDM601_0477 gpmA; phosphoglycerate mutase 1 Gpm1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:mjd02048]
D JDM601_3002 conserved hypothetical protein K19131 csb1; CRISPR-associated protein Csb1
D JDM601_1361 type III restriction enzyme res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D JDM601_1362 restriction modification system DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D JDM601_1363 hsdM; type I restriction/modification system DNA methylase HsdM K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D JDM601_1356 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D JDM601_0595 restriction endonuclease K07448 mrr; restriction system protein
D JDM601_1357 conserved hypothetical protein K07448 mrr; restriction system protein
D JDM601_0672 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JDM601_1225 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JDM601_3382 PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JDM601_4085 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D JDM601_1226 hypothetical protein K26983 mazE3; antitoxin MazE3
D JDM601_4084 transcriptional regulator K26989 mazE9; antitoxin MazE9
D JDM601_2058 conserved hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D JDM601_2059 conserved hypothetical protein K28297 relB_F; antitoxin RelB/F
D JDM601_0843 HipA N-terminal domain protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D JDM601_4206 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D JDM601_1127 conserved hypothetical protein K07341 doc; death on curing protein
D JDM601_1335 PilT protein domain protein K28141 vapC1S; ribonuclease VapC1/3/9/12 [EC:3.1.-.-]
D JDM601_1792 conserved hypothetical protein K28141 vapC1S; ribonuclease VapC1/3/9/12 [EC:3.1.-.-]
D JDM601_1793 conserved hypothetical protein K28257 vapB12; antitoxin VapB12
D JDM601_0271 conserved hypothetical protein K28147 vapC2S; ribonuclease VapC2/6/11/15/17/18/21/51 [EC:3.1.-.-]
D JDM601_0569 conserved hypothetical protein K28147 vapC2S; ribonuclease VapC2/6/11/15/17/18/21/51 [EC:3.1.-.-]
D JDM601_4096 conserved hypothetical protein K28147 vapC2S; ribonuclease VapC2/6/11/15/17/18/21/51 [EC:3.1.-.-]
D JDM601_1334 conserved hypothetical protein K28148 vapB2; antitoxin VapB2
D JDM601_0270 conserved hypothetical protein K28152 vapB6S; antitoxin VapB6/11/15/18/21
D JDM601_0568 conserved hypothetical protein K28152 vapB6S; antitoxin VapB6/11/15/18/21
D JDM601_4095 conserved hypothetical protein K28259 vapB17; antitoxin VapB17
D JDM601_1260 prevent-host-death family protein K28150 vapB4_5; antitoxin VapB4/5
D JDM601_2052 prevent-host-death family protein K28150 vapB4_5; antitoxin VapB4/5
D JDM601_0584 conserved hypothetical protein K28262 vapC7_13_23; ribonuclease VapC7/13/23 [EC:3.1.-.-]
D JDM601_0583 CopG family DNA-binding protein K28263 vapB7; antitoxin VapB7
D JDM601_2889 conserved hypothetical protein K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-]
D JDM601_4064 PilT protein domain protein K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-]
D JDM601_2888 prevent-host-death family protein K28280 vapB22; antitoxin VapB22
D JDM601_4065 prevent-host-death family protein K28280 vapB22; antitoxin VapB22
D JDM601_1799 conserved hypothetical protein K28143 vapC24S; ribonuclease VapC24/25/29/31/33/37/38/39/41/43/44/48 [EC:3.1.-.-]
D JDM601_3263 PIN domain protein family protein K28143 vapC24S; ribonuclease VapC24/25/29/31/33/37/38/39/41/43/44/48 [EC:3.1.-.-]
D JDM601_1798 conserved hypothetical protein K28144 vapB24S; antitoxin VapB24/25/29/31/33/37/38/39/41/43/44/48
D JDM601_3264 CopG family DNA-binding protein K28144 vapB24S; antitoxin VapB24/25/29/31/33/37/38/39/41/43/44/48
D JDM601_1815 conserved hypothetical protein K28282 vapC26; ribonuclease VapC26 [EC:3.1.-.-]
D JDM601_1270 conserved hypothetical protein K28272 vapC27_40; ribonuclease VapC27/40 [EC:3.1.-.-]
D JDM601_1269 conserved hypothetical protein K28273 vapB27_40; ribonuclease VapB27/40
D JDM601_3407 conserved hypothetical protein K28275 vapC35S; ribonuclease VapC35/45/46/47 [EC:3.1.-.-]
D JDM601_1746 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JDM601_2694 gltX; glutamyl-tRNA synthetase GltS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JDM601_2742 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:mjd04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:mjd01504]
D JDM601_0723 predicted aminoglycoside phosphotransferase K06979 mph; macrolide phosphotransferase
D JDM601_1940 conserved hypothetical protein K02172 blaR1; bla regulator protein blaR1
D JDM601_1941 transcriptional regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D JDM601_1992 lpqR; lipoprotein LpqR K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:mjd00536]
D JDM601_0463 hbhA; iron-regulated heparin binding hemagglutinin HbhA K16645 hbhA; heparin binding hemagglutinin HbhA
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:mjd03100]
D JDM601_tRNA02 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JDM601_tRNA15 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JDM601_tRNA37 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D JDM601_tRNA14 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM601_tRNA18 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM601_tRNA22 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM601_tRNA44 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D JDM601_tRNA25 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D JDM601_tRNA12 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D JDM601_tRNA33 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D JDM601_tRNA16 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM601_tRNA36 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D JDM601_tRNA11 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM601_tRNA35 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D JDM601_tRNA05 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM601_tRNA23 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM601_tRNA32 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D JDM601_tRNA21 tRNA-His K14226 tRNA-His; tRNA His
D JDM601_tRNA01 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D JDM601_tRNA03 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA17 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA19 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA28 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA30 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D JDM601_tRNA10 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM601_tRNA20 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D JDM601_tRNA08 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM601_tRNA26 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM601_tRNA38 tRNA-Met K14230 tRNA-Met; tRNA Met
D JDM601_tRNA13 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D JDM601_tRNA24 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM601_tRNA29 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM601_tRNA41 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D JDM601_tRNA42 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM601_tRNA43 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM601_tRNA45 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM601_tRNA46 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D JDM601_tRNA07 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM601_tRNA39 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM601_tRNA40 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D JDM601_tRNA09 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D JDM601_tRNA06 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D JDM601_tRNA27 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM601_tRNA31 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM601_tRNA34 tRNA-Val K14237 tRNA-Val; tRNA Val
D JDM601_tRNA04 tRNA-Ser K14238 tRNA-Sec; tRNA Sec
D JDM601_rRNA01 rpmG; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM601_rRNA02 rplK; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D JDM601_rRNA03 rplA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM601_rRNA04 rplJ; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JDM601_rRNA05 rplL; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D JDM601_rRNA06 rpsL; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JDM601_1636 adhE2; zinc-dependent alcohol dehydrogenase AdhE2 K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306]
D JDM601_4099 short-chain type dehydrogenase/reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333]
D JDM601_0232 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JDM601_2674 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JDM601_2675 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JDM601_0380 fgd1; F420-dependent glucose-6-phosphate dehydrogenase Fgd1 K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D JDM601_4098 oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3]
D JDM601_1231 conserved hypothetical protein K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D JDM601_2170 conserved hypothetical protein K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D JDM601_3696 conserved hypothetical protein K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D JDM601_2351 adhD_1; zinc-containing alcohol dehydrogenase NAD-dependent AdhD_1 K00119 E1.1.99.36; alcohol dehydrogenase (nicotinoprotein) [EC:1.1.99.36]
D JDM601_3359 aldehyde dehydrogenase (NAD+) dependent K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D JDM601_3822 aldehyde dehydrogenase (NAD+) dependent K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D JDM601_1162 fadH; NADPH dependent 24-dienoyl-CoA reductase FadH K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D JDM601_3348 pqqE; coenzyme PQQ synthesis protein E PqqE K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26]
D JDM601_0555 FAD-linked oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D JDM601_2783 oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D JDM601_1534 fadE20; acyl-CoA dehydrogenase FadE20 K00257 mbtN; acyl-ACP dehydrogenase [EC:1.3.99.-]
D JDM601_3347 lldD1; L-lactate dehydrogenase (cytochrome) LldD1 K24693 mftD; pre-mycofactocin synthase [EC:1.4.3.26]
D JDM601_2041 putative reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D JDM601_2045 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D JDM601_3126 lpdA; dihydrolipoamide dehydrogenase LpdA K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D JDM601_0706 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JDM601_2261 qor; quinone reductase Qor K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JDM601_2883 fadB4; NADPH quinone oxidoreductase FadB4 K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D JDM601_1124 2-nitropropane dioxygenase K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JDM601_2573 mtr; NADPH-dependent mycothiol reductase Mtr K17883 mtr; mycothione reductase [EC:1.8.1.15]
D JDM601_0081 msrA; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JDM601_2420 conserved hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D JDM601_0800 conserved hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D JDM601_1387 bcp; bacterioferritin comigratory protein Bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JDM601_2136 bcpB; peroxidoxin BcpB K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JDM601_2024 tpx; thiol peroxidase Tpx K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JDM601_2193 OsmC family protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JDM601_3986 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JDM601_1962 ahpD; alkyl hydroperoxide reductase D protein AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D JDM601_1963 ahpC; alkyl hydroperoxide reductase C protein AhpC K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D JDM601_1658 ahpE; peroxiredoxin AhpE K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D JDM601_3571 conserved hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D JDM601_0036 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D JDM601_0146 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D JDM601_0680 dioxygenase K11159 K11159; carotenoid cleavage oxygenase [EC:1.13.11.-]
D JDM601_3883 conserved hypothetical protein K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57]
D JDM601_0812 fprB; NADPH:adrenodoxin oxidoreductase FprB K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JDM601_2846 fprA_1; NADPH:adrenodoxin oxidoreductase FprA_1 K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JDM601_0979 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D JDM601_2913 glutaredoxin protein K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D JDM601_2605 hycP; hydrogenase HycP K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D JDM601_2606 hycQ; hydrogenase HycQ K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D JDM601_0451 mmaA5_1; methoxy mycolic acid synthase 5 MmaA5_1 K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDM601_0452 pcaA; mycolic acid synthase PcaA K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDM601_0666 umaA; mycolic acid synthase UmaA K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDM601_3979 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDM601_4007 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDM601_4009 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D JDM601_2997 O-methyltransferase K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365]
D JDM601_0554 methyltransferase K24667 htm; 2-heptyl-1-hydroxyquinolin-4(1H)-one methyltransferase [EC:2.1.1.374]
D JDM601_3540 mshD; mycothiol acetyltransferase MshD K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D JDM601_2102 ppm1A; polyprenol-monophosphomannose synthase Ppm1A K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JDM601_1490 conserved hypothetical protein K22797 octT; diglucosylglycerate octanoyltransferase [EC:2.3.1.273]
D JDM601_2209 papA5; polyketide synthase associated protein PapA5 K23414 papA5; phenolphthiocerol/phthiocerol/phthiodiolone dimycocerosyl transferase [EC:2.3.1.282]
D JDM601_1533 conserved hypothetical protein K21992 mbtK; lysine N-acyltransferase [EC:2.3.1.-]
D JDM601_4071 conserved hypothetical protein K21992 mbtK; lysine N-acyltransferase [EC:2.3.1.-]
D JDM601_2202 PE family protein K22796 chp2; diacyltrehalose acyltransferase [EC:2.3.1.-]
D JDM601_0954 conserved hypothetical protein K22886 K22886; protein lysine acetyltransferase [EC:2.3.1.-]
D JDM601_0205 integral membrane acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-]
D JDM601_0475 mannosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D JDM601_2130 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JDM601_2678 conserved hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D JDM601_1679 glnE; glutamate-ammonia-ligase adenylyltransferase GlnE K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D JDM601_0592 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D JDM601_0715 acyl-CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D JDM601_2853 conserved hypothetical protein K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20]
D JDM601_2071 lppD; lipoprotein LppD K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D JDM601_2096 lipT; carboxylesterase LipT K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D JDM601_3341 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D JDM601_2918 lipV; lipase LipV K19311 lipV; lipase [EC:3.1.1.-]
D JDM601_1613 cutinase precursor K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-]
D JDM601_1630 cfp21; cutinase Cfp21 K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-]
D JDM601_1631 cfp21; cutinase Cfp21 K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-]
D JDM601_2884 cut5; cutinase Cut5 K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-]
D JDM601_3083 cut1; cutinase Cut1 K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-]
D JDM601_3097 cut5; cutinase Cut5 K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-]
D JDM601_3277 cfp21; cutinase Cfp21 K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-]
D JDM601_4119 conserved hypothetical protein K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-]
D JDM601_0117 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JDM601_1433 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JDM601_1424 plsC; bifunctional transmembrane phospholipid biosynthesis enzyme PlsC K15781 serB-plsC; putative phosphoserine phosphatase / 1-acylglycerol-3-phosphate O-acyltransferase [EC:3.1.3.3 2.3.1.51]
D JDM601_0097 ptpB; phosphotyrosine protein phosphatase PtpB K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JDM601_1489 gpm_1; phosphoglycerate mutase Gpm_1 K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D JDM601_4125 transmembrane protein K27842 E3.1.3.111; decaprenylphosphoryl-5-phosphoribose phosphatase [EC:3.1.3.111]
D JDM601_1271 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D JDM601_1045 hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D JDM601_0964 tatD; deoxyribonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JDM601_1323 conserved hypothetical protein K07503 nucS; endonuclease [EC:3.1.-.-]
D JDM601_0882 endoglycoceramidase K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]
D JDM601_4151 endoglycoceramidase K05991 E3.2.1.123; endoglycosylceramidase [EC:3.2.1.123]
D JDM601_2998 conserved hypothetical protein K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221]
D JDM601_0073 conserved hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D JDM601_1285 conserved hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D JDM601_3989 conserved hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226]
D JDM601_3346 creatinine amidohydrolase K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14]
D JDM601_0403 def; polypeptide deformylase Def K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JDM601_1159 mshB; N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase MshB K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D JDM601_1028 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D JDM601_0469 amidohydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D JDM601_1437 conserved hypothetical protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D JDM601_1981 moxR3; methanol dehydrogenase transcriptional regulatory protein MoxR3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JDM601_2235 moxR1; transcriptional regulatory protein MoxR1 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JDM601_3971 moxR2; methanol dehydrogenase transcriptional regulatory protein MoxR2 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JDM601_1134 amidohydrolase 2 K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D JDM601_1408 mandelate racemase K22209 tarD; D(-)-tartrate dehydratase [EC:4.2.1.81]
D JDM601_3246 transmembrane protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D JDM601_1118 echA1_1; enoyl-CoA hydratase EchA1_1 K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149]
D JDM601_3649 echA19; enoyl-CoA hydratase EchA19 K28233 echA19; 3-oxochol-4,22-dien-24-oyl-CoA hydratase (R-form) [EC:4.2.1.-]
D JDM601_0817 FK-506 binding protein peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D JDM601_3814 fadD13; fatty-acid-CoA ligase FadD13 K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D JDM601_0256 fadD17; fatty-acid-CoA synthetase FadD17 K25776 casI; steroid-22-oyl-CoA synthetase [EC:6.2.1.-]
D JDM601_1772 mshC; cysteinyl-tRNA synthetase MshC K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D JDM601_0928 accD2; acetyl-/propionyl-CoA carboxylase (beta subunit) AccD2 K01970 accD2; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D JDM601_3761 accD2; acetyl-/propionyl-CoA carboxylase (beta subunit) AccD2 K01970 accD2; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D JDM601_0826 accD3; acetyl-coenzyme A carboxylase carboxyl transferase (subunit beta) AccD3 K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
D JDM601_0927 accA2; acetyl-/propionyl-coenzyme A carboxylase alpha chain AccA2 K27596 accA2; acyl-CoA carboxylase subunit alpha [EC:6.4.1.-]
D JDM601_3021 ctpC; metal cation-transporting p-type ATPase C CtpC K12950 ctpC; manganese-transporting P-type ATPase C [EC:7.2.2.22]
D JDM601_0830 ctpE; metal cation transporter ATPase p-type CtpE K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
D JDM601_0399 ctpH; metal cation transporting p-type ATPase CtpH K12955 ctpI; cation-transporting P-type ATPase I [EC:7.2.2.-]
D JDM601_2246 ctpI; cation-transporter ATPase I CtpI K12955 ctpI; cation-transporting P-type ATPase I [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D JDM601_0279 fdhD; formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D JDM601_3439 ferredoxin K05337 fer; ferredoxin
D JDM601_3482 conserved hypothetical protein K05337 fer; ferredoxin
D JDM601_3492 ferredoxin reductase FdxD K05337 fer; ferredoxin
D JDM601_3498 fdxD_2; ferredoxin FdxD_2 K05337 fer; ferredoxin
D JDM601_3499 ferredoxin K05337 fer; ferredoxin
D JDM601_3634 fdxD; ferredoxin FdxD K05337 fer; ferredoxin
D JDM601_3735 ferredoxin K05337 fer; ferredoxin
D JDM601_2250 nitrogen fixation related protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D JDM601_1108 conserved hypothetical protein K02448 norD; nitric oxide reductase NorD protein
D JDM601_3419 morD; MorD K02448 norD; nitric oxide reductase NorD protein
D JDM601_3562 von Willebrand factor type A K02448 norD; nitric oxide reductase NorD protein
D JDM601_0202 cytochrome C oxidase subunit III K02164 norE; nitric oxide reductase NorE protein
D JDM601_4107 cytochrome C oxidase subunit III K02164 norE; nitric oxide reductase NorE protein
D JDM601_1109 ATPase K04748 norQ; nitric oxide reductase NorQ protein
D JDM601_3418 CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein
D JDM601_3560 ATPase K04748 norQ; nitric oxide reductase NorQ protein
D JDM601_2749 fixA; electron transfer flavoprotein (beta-subunit) FixA K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D JDM601_0687 fadE8; acyl-CoA dehydrogenase FADE8 K09456 aidB; putative acyl-CoA dehydrogenase
D JDM601_1491 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D JDM601_2788 nrdI; NrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D JDM601_4167 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D JDM601_0795 rpfA; resuscitation-promoting factor RpfA K21687 rpfA; resuscitation-promoting factor RpfA
D JDM601_0965 rpfB; resuscitation-promoting factor RpfB K21688 rpfB; resuscitation-promoting factor RpfB
D JDM601_2353 resuscitation-promoting K21689 rpfC; resuscitation-promoting factor RpfC
D JDM601_1521 resuscitation-promoting factor-like protein K21690 rpfD; resuscitation-promoting factor RpfD
D JDM601_1456 resuscitation-promoting factor-like protein K21691 rpfE; resuscitation-promoting factor RpfE
D JDM601_0571 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
D JDM601_3916 glycosyl transferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
D JDM601_3345 membrane glycosyl transferase K24698 mftF; mycofactocin glycosyltransferase
C 99987 Cofactor metabolism
D JDM601_3350 conserved hypothetical protein K24694 mftA; mycofactocin precursor peptide MftA
D JDM601_3349 conserved hypothetical protein K24695 mftB; mycofactocin biosynthesis protein MftB
C 99988 Secondary metabolism
D JDM601_0101 conserved hypothetical protein K24084 aidA; quorum-quenching protein AidA
C 99999 Others
D JDM601_0743 DoxX family protein K15977 K15977; putative oxidoreductase
D JDM601_1079 DoxX family protein K15977 K15977; putative oxidoreductase
D JDM601_2726 conserved hypothetical protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JDM601_0798 cspB; cold shock-like protein B CspB K03704 cspA; cold shock protein
D JDM601_3933 cspA_1; cold shock protein A CspA_1 K03704 cspA; cold shock protein
D JDM601_1627 tex; transcriptional accessory protein Tex K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D JDM601_1337 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D JDM601_1446 tig; trigger factor (TF) protein TIG K03545 tig; trigger factor
D JDM601_2840 smpB; ssRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D JDM601_2789 nrdH; glutaredoxin electron transport component of NRDEF (glutaredoxin-like protein) NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D JDM601_2618 conserved hypothetical protein K07391 comM; magnesium chelatase family protein
D JDM601_0526 ResB-family protein K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D JDM601_2919 DNA-methyltransferase (modification methylase) K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D JDM601_0756 conserved hypothetical protein K07445 K07445; putative DNA methylase
D JDM601_2518 conserved hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D JDM601_2619 conserved hypothetical protein K07460 yraN; putative endonuclease
D JDM601_2617 conserved hypothetical protein K04096 smf; DNA processing protein
D JDM601_2347 recombination factor protein RarA K07478 ycaJ; putative ATPase
D JDM601_0614 transposase mutator type IS256 family K07493 K07493; putative transposase
D JDM601_2060 transposase Mutator family protein IS256 family K07493 K07493; putative transposase
D JDM601_2349 transposase mutator type IS256 family K07493 K07493; putative transposase
D JDM601_3772 transposase Mutator family protein IS256 family K07493 K07493; putative transposase
D JDM601_3905 transposase mutator type IS256 family K07493 K07493; putative transposase
D JDM601_0770 transposase ISMyma01_aa2-like protein K07497 K07497; putative transposase
D JDM601_0771 transposase ISMyma01_aa1-like protein K07497 K07497; putative transposase
D JDM601_1315 transposase ISMyma01_aa1-like protein K07497 K07497; putative transposase
D JDM601_1316 transposase ISMyma01_aa2-like protein K07497 K07497; putative transposase
D JDM601_1370 transposase ISMyma01_aa2-like protein K07497 K07497; putative transposase
D JDM601_1371 transposase ISMyma01_aa1-like protein K07497 K07497; putative transposase
D JDM601_2062 integrase catalytic subunit K07497 K07497; putative transposase
D JDM601_3769 transposase ISMyma01_aa2-like protein K07497 K07497; putative transposase
D JDM601_3770 transposase ISMyma01_aa1-like protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D JDM601_2493 35 kDa alanine rich protein K03969 pspA; phage shock protein A
D JDM601_4004 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JDM601_0538 pitA; low-affinity inorganic phosphate transporter PitA K03306 TC.PIT; inorganic phosphate transporter, PiT family
C 99978 Cell growth
D JDM601_2106 conserved hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D JDM601_4343 conserved hypothetical protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D JDM601_1156 typA; GTP-binding translation elongation factor TypA K06207 typA; GTP-binding protein
D JDM601_1554 phoH1; PhoH-like protein PhoH1 K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D JDM601_1041 phoH2; PhoH-like protein PhoH2 K07175 phoH2; PhoH-like ATPase
D JDM601_0561 putative nucleotide-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D JDM601_0820 conserved hypothetical protein K16192 K16192; uncharacterized membrane protein ArfB
D JDM601_0821 conserved hypothetical protein K16193 arfC; uncharacterized membrane protein ArfC
D JDM601_3917 conserved hypothetical protein K09153 K09153; small membrane protein
C 99994 Others
D JDM601_3529 phoY2; phosphate-transport system regulatory protein PhoY2 K02039 phoU; phosphate transport system protein
D JDM601_3423 conserved hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin
D JDM601_0378 conserved hypothetical protein K20467 K20467; heme-binding protein
D JDM601_0777 conserved hypothetical protein K20467 K20467; heme-binding protein
D JDM601_0977 conserved hypothetical protein K20467 K20467; heme-binding protein
D JDM601_3724 conserved hypothetical protein K20467 K20467; heme-binding protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JDM601_0509 conserved hypothetical protein K04477 ycdX; putative hydrolase
D JDM601_3934 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D JDM601_0155 glbN; globin family protein hemoglobin K06886 glbN; hemoglobin
D JDM601_1435 glbO; globin (oxygen-binding protein) GlbO K06886 glbN; hemoglobin
D JDM601_0880 mmpL5_2; transmembrane transport protein MmpL5_2 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_1176 MmpL family transport protein K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_1492 mmpL5_2; transmembrane transport protein MmpL5_2 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_1759 mmpL13; transmembrane transport protein MmpL13 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_2007 mmpL5_2; transmembrane transport protein MmpL5_2 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_2010 mmpL5_5; transmembrane transport protein MmpL5_5 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_2068 MmpL family transport protein K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_2194 mmpL5_3; transmembrane transport protein MmpL5_3 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_2754 transmembrane transport protein K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_3207 mmpL5; transmembrane transport protein MmpL5 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_4017 mmpL5_4; transmembrane transport protein MmpL5_4 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_4140 MmpL family transport protein K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_4213 mmpL5_2; transmembrane transport protein MmpL5_2 K06994 K06994; putative drug exporter of the RND superfamily
D JDM601_0654 transmembrane protein K07001 K07001; NTE family protein
D JDM601_1011 conserved hypothetical protein K07001 K07001; NTE family protein
D JDM601_1012 conserved hypothetical protein K07001 K07001; NTE family protein
D JDM601_3779 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JDM601_3808 hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D JDM601_2254 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JDM601_2253 conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D JDM601_0210 php; phosphotriesterase PHP K07048 PTER; phosphotriesterase-related protein
D JDM601_2450 conserved hypothetical protein K07058 K07058; membrane protein
D JDM601_3158 integral membrane protein K07058 K07058; membrane protein
D JDM601_1752 conserved hypothetical protein K07100 K07100; putative phosphoribosyl transferase
D JDM601_2104 fxsA; FxsA K07113 fxsA; UPF0716 protein FxsA
D JDM601_3044 sufE; Fe-S metabolism associated protein SufE K02426 sufE; cysteine desulfuration protein SufE
D JDM601_0356 transmembrane protein K03975 dedA; membrane-associated protein
D JDM601_2088 ABC-2 type transporter K01421 yhgE; putative membrane protein
D JDM601_0889 conserved hypothetical protein K08972 K08972; putative membrane protein
D JDM601_0424 membrane flanked domain-containing protein K08981 K08981; putative membrane protein
C 99997 Function unknown
D JDM601_0170 conserved hypothetical protein K06860 K06860; putative heme uptake system protein
D JDM601_1030 transmembrane protein K06888 K06888; uncharacterized protein
D JDM601_0030 lysophospholipase K06889 K06889; uncharacterized protein
D JDM601_0090 conserved hypothetical protein K06893 K06893; uncharacterized protein
D JDM601_2652 conserved hypothetical protein K06893 K06893; uncharacterized protein
D JDM601_3197 GTP/ATP-binding protein K06945 K06945; uncharacterized protein
D JDM601_2630 conserved hypothetical protein K06960 K06960; uncharacterized protein
D JDM601_3156 acetyltransferase K06975 K06975; uncharacterized protein
D JDM601_2587 conserved hypothetical protein K06976 K06976; uncharacterized protein
D JDM601_1971 peptidase S15 K06978 K06978; uncharacterized protein
D JDM601_2553 hydrolase K06978 K06978; uncharacterized protein
D JDM601_3577 conserved hypothetical protein K06986 K06986; uncharacterized protein
D JDM601_1415 conserved hypothetical protein K07005 K07005; uncharacterized protein
D JDM601_0850 conserved hypothetical protein K07006 K07006; uncharacterized protein
D JDM601_2107 conserved hypothetical protein K07006 K07006; uncharacterized protein
D JDM601_2178 conserved hypothetical protein K07006 K07006; uncharacterized protein
D JDM601_3103 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07006 K07006; uncharacterized protein
D JDM601_0393 conserved hypothetical protein K07020 K07020; uncharacterized protein
D JDM601_2293 conserved hypothetical protein K07028 K07028; uncharacterized protein
D JDM601_2530 conserved hypothetical protein K07044 K07044; uncharacterized protein
D JDM601_2723 conserved hypothetical protein K07044 K07044; uncharacterized protein
D JDM601_0302 amidohydrolase family protein K07045 K07045; uncharacterized protein
D JDM601_3389 metal-dependent hydrolase K07045 K07045; uncharacterized protein
D JDM601_3487 metal-dependent hydrolase K07045 K07045; uncharacterized protein
D JDM601_3760 conserved hypothetical protein K07045 K07045; uncharacterized protein
D JDM601_2361 membrane glycine rich protein K07054 K07054; uncharacterized protein
D JDM601_0849 conserved hypothetical protein K07071 K07071; uncharacterized protein
D JDM601_1687 conserved hypothetical protein K07071 K07071; uncharacterized protein
D JDM601_3576 putative FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D JDM601_0246 membrane permease K07086 K07086; uncharacterized protein
D JDM601_1866 conserved hypothetical protein K07090 K07090; uncharacterized protein
D JDM601_3962 conserved hypothetical protein K07098 K07098; uncharacterized protein
D JDM601_0350 ketoacyl reductase K07124 K07124; uncharacterized protein
D JDM601_3824 ketoacyl reductase K07124 K07124; uncharacterized protein
D JDM601_3199 conserved hypothetical protein K07131 K07131; uncharacterized protein
D JDM601_3204 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D JDM601_0408 conserved hypothetical protein K07157 K07157; uncharacterized protein
D JDM601_1483 conserved hypothetical protein K07161 K07161; uncharacterized protein
D JDM601_1665 conserved hypothetical protein K07164 K07164; uncharacterized protein
D JDM601_1924 conserved hypothetical protein K08999 K08999; uncharacterized protein
D JDM601_0990 conserved hypothetical protein K09009 K09009; uncharacterized protein
D JDM601_3967 conserved hypothetical protein K09117 K09117; uncharacterized protein
D JDM601_2905 transmembrane protein K09118 K09118; uncharacterized protein
D JDM601_1797 conserved hypothetical protein K09131 K09131; uncharacterized protein
D JDM601_0868 conserved hypothetical protein K09137 K09137; uncharacterized protein
D JDM601_1808 conserved hypothetical protein K09146 K09146; uncharacterized protein
D JDM601_0423 membrane-flanked domain-containing protein K09167 K09167; uncharacterized protein
D JDM601_0565 conserved hypothetical protein K09763 K09763; uncharacterized protein
D JDM601_1783 conserved hypothetical protein K09764 K09764; uncharacterized protein
D JDM601_1843 conserved hypothetical protein K09791 K09791; uncharacterized protein
D JDM601_3904 lpqG; lipoprotein LpqG K09807 K09807; uncharacterized protein
D JDM601_1994 conserved hypothetical protein K09861 K09861; uncharacterized protein
D JDM601_2508 conserved hypothetical protein K09927 K09927; uncharacterized protein
D JDM601_4035 conserved hypothetical protein K09957 K09957; uncharacterized protein
D JDM601_2463 conserved hypothetical protein K09958 K09958; uncharacterized protein
D JDM601_0445 conserved hypothetical protein K09959 K09959; uncharacterized protein
D JDM601_2730 conserved hypothetical protein K09966 K09966; uncharacterized protein
D JDM601_2663 conserved hypothetical protein K09967 K09967; uncharacterized protein
D JDM601_2664 urea carboxylase-associated protein 2 K09967 K09967; uncharacterized protein
D JDM601_1671 conserved hypothetical protein K09990 K09990; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 27, 2025