+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Melaminivora jejuensis

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ACRISPR-Cas system B Universal Cas proteins C LVC68_16555 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1 C LVC68_16775 cas1c; type I-C CRISPR-associated endonuclease Cas1c K15342 cas1; CRISP-associated protein Cas1 C LVC68_16770 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D LVC68_16550 cas3f; type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D LVC68_16805 cas3; CRISPR-associated helicase Cas3' K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D LVC68_16780 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D LVC68_16780 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D LVC68_16795 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1 D LVC68_16790 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2 D LVC68_16780 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D LVC68_16800 cas5c; type I-C CRISPR-associated protein Cas5c K19119 cas5d; CRISPR-associated protein Cas5d C Subtype I-D factors D LVC68_16780 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors C Subtype I-F factors D LVC68_16535 csy1; type I-F CRISPR-associated protein Csy1 K19127 csy1; CRISPR-associated protein Csy1 D LVC68_16530 csy2; type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2 D LVC68_16525 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3 D LVC68_16520 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-] C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D LVC68_16780 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C LVC68_08365 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C LVC68_11170 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C LVC68_14600 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C LVC68_07345 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C LVC68_08360 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C LVC68_11160 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C LVC68_14595 restriction endonuclease K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C LVC68_08355 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C LVC68_11155 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C LVC68_14585 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D LVC68_16255 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C LVC68_04850 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] C LVC68_15130 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5] C LVC68_04845 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] C LVC68_08490 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C LVC68_03845 restriction endonuclease K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D LVC68_08400 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K07172 mazE; antitoxin MazE C ChpB-ChpS C YhaV-PrlF D LVC68_08275 type II toxin-antitoxin system YhaV family toxin K19155 yhaV; toxin YhaV [EC:3.1.-.-] D LVC68_08270 type II toxin-antitoxin system PrlF family antitoxin K19156 prlF; antitoxin PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ D LVC68_11135 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D LVC68_14340 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D LVC68_11140 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J D LVC68_14335 type II toxin-antitoxin system RelB/DinJ family antitoxin K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM D LVC68_07565 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D LVC68_12235 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D LVC68_07560 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM D LVC68_12240 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM C HipA-HipB D LVC68_14295 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB C HicA-HicB D LVC68_15725 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd C HigB-HigA D LVC68_10985 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D LVC68_13430 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D LVC68_04830 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D LVC68_06890 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D LVC68_15135 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D LVC68_16540 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D LVC68_10990 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D LVC68_13435 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D LVC68_04835 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D LVC68_15140 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D LVC68_16545 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA D LVC68_15880 type II toxin-antitoxin system MqsA family antitoxin K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA C VapC-VapB D LVC68_07350 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA D LVC68_11355 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-] D LVC68_11495 type II toxin-antitoxin system VapC family toxin K07062 fitB; toxin FitB [EC:3.1.-.-] C BC_0920-BC_0921 C Type II TA system related factors D LVC68_03075 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D LVC68_01085 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D LVC68_04855 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D LVC68_04825 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D LVC68_09615 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D LVC68_06255 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C LVC68_10070 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023