+D GENES KO
#
KEGG Orthology (KO) - Marinimicrobium sp. C6131
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:mke00010]
D OOT55_02945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D OOT55_15955 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D OOT55_15950 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D OOT55_00270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D OOT55_02520 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D OOT55_02975 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D OOT55_12125 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D OOT55_11730 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D OOT55_06815 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D OOT55_02980 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D OOT55_08055 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D OOT55_07185 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D OOT55_07180 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_00415 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D OOT55_16770 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D OOT55_00090 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D OOT55_13305 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D OOT55_12945 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:mke00020]
D OOT55_06685 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D OOT55_02695 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D OOT55_05590 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D OOT55_06630 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D OOT55_06660 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D OOT55_06655 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_06640 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D OOT55_06645 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D OOT55_06670 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D OOT55_06665 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D OOT55_10830 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D OOT55_06680 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D OOT55_06675 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D OOT55_01750 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D OOT55_04730 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D OOT55_06355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D OOT55_07185 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D OOT55_07180 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:mke00030]
D OOT55_02945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D OOT55_02960 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D OOT55_02965 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D OOT55_10250 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D OOT55_09345 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D OOT55_12130 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D OOT55_02675 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D OOT55_14960 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D OOT55_12945 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D OOT55_09120 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D OOT55_17230 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D OOT55_02955 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D OOT55_02970 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D OOT55_08800 gluconokinase, GntK/IdnK-type K00851 idnK; gluconokinase [EC:2.7.1.12]
D OOT55_15820 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D OOT55_15935 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D OOT55_15950 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D OOT55_15955 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:mke00040]
D OOT55_15945 pectinesterase family protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D OOT55_15880 kduI; 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D OOT55_01985 uxaC; glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D OOT55_14555 UxaA family hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D OOT55_07325 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D OOT55_15825 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D OOT55_15835 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D OOT55_17720 D-galactonate dehydratase family protein K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D OOT55_15940 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D OOT55_04445 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D OOT55_04215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D OOT55_06440 yiaK; 3-dehydro-L-gulonate 2-dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D OOT55_00050 araD; L-ribulose-5-phosphate 4-epimerase AraD K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D OOT55_09345 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D OOT55_00055 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D OOT55_00045 ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D OOT55_15055 FGGY family carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D OOT55_15050 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D OOT55_02540 rhaI; L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D OOT55_14160 SDR family oxidoreductase K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D OOT55_09280 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:mke00051]
D OOT55_12870 cellulase family glycosylhydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D OOT55_09210 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D OOT55_16295 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D OOT55_04270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D OOT55_04210 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D OOT55_12945 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D OOT55_04220 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D OOT55_14545 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D OOT55_14535 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D OOT55_14560 SDR family oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D OOT55_14565 fumarylacetoacetate hydrolase family protein K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D OOT55_02540 rhaI; L-rhamnose catabolism isomerase K01820 rhaA; L-rhamnose isomerase / sugar isomerase [EC:5.3.1.14 5.3.1.-]
D OOT55_15955 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D OOT55_15050 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D OOT55_15950 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D OOT55_00270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D OOT55_02520 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D OOT55_09220 glycoside hydrolase family 32 protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
C 00052 Galactose metabolism [PATH:mke00052]
D OOT55_00090 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D OOT55_13305 galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D OOT55_00325 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D OOT55_13295 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D OOT55_00320 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D OOT55_13300 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D OOT55_00315 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D OOT55_09635 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D OOT55_13310 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D OOT55_04215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D OOT55_12945 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D OOT55_00055 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D OOT55_15955 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D OOT55_09165 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D OOT55_12455 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:mke00053]
D OOT55_04445 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D OOT55_14545 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D OOT55_14730 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D OOT55_00050 araD; L-ribulose-5-phosphate 4-epimerase AraD K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D OOT55_06440 yiaK; 3-dehydro-L-gulonate 2-dehydrogenase K08092 dlgD; 3-dehydro-L-gulonate 2-dehydrogenase [EC:1.1.1.130]
D OOT55_00040 dihydroxy-acid dehydratase K13875 araC; L-arabonate dehydrase [EC:4.2.1.25]
D OOT55_09280 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:mke00500]
D OOT55_09165 glycoside hydrolase family 97 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D OOT55_12455 alpha-glucosidase family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D OOT55_04215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D OOT55_06380 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_12010 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_15270 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_01565 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D OOT55_12855 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D OOT55_12865 glycoside hydrolase family 6 protein K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D OOT55_05185 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D OOT55_05195 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D OOT55_05190 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D OOT55_08070 glgP; alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D OOT55_03135 starch-binding protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D OOT55_05175 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D OOT55_00550 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D OOT55_12445 alpha-amylase family glycosyl hydrolase K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19]
D OOT55_00555 glycoside hydrolase family 65 protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D OOT55_12945 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D OOT55_02945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D OOT55_09210 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D OOT55_16295 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00620 Pyruvate metabolism [PATH:mke00620]
D OOT55_16770 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D OOT55_07185 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D OOT55_07180 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_00415 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D OOT55_12290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D OOT55_12295 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D OOT55_02980 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D OOT55_07240 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D OOT55_02060 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D OOT55_02055 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D OOT55_06125 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D OOT55_15290 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D OOT55_08060 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D OOT55_10580 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D OOT55_05320 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D OOT55_05390 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D OOT55_01585 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D OOT55_01590 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D OOT55_06355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D OOT55_01750 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D OOT55_04730 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D OOT55_11070 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D OOT55_08055 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_14020 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mke00630]
D OOT55_06355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D OOT55_06685 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D OOT55_02695 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D OOT55_05590 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D OOT55_16770 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_05490 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D OOT55_15975 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D OOT55_16730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D OOT55_02660 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D OOT55_15350 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_15345 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D OOT55_08825 phosphoribulokinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D OOT55_05680 isocitrate/isopropylmalate dehydrogenase family protein K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D OOT55_02970 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D OOT55_08135 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D OOT55_08405 acetamidase/formamidase family protein K01455 fmdA; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:mke00640]
D OOT55_16770 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D OOT55_12290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D OOT55_12295 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D OOT55_07240 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D OOT55_02060 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D OOT55_02055 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D OOT55_06125 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D OOT55_05675 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D OOT55_17495 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D OOT55_06645 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D OOT55_06640 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D OOT55_02695 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D OOT55_05590 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D OOT55_05615 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:mke00650]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D OOT55_02155 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D OOT55_01590 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D OOT55_05680 isocitrate/isopropylmalate dehydrogenase family protein K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D OOT55_06670 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D OOT55_06665 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D OOT55_10830 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D OOT55_06680 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D OOT55_06675 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D OOT55_05675 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D OOT55_17495 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D OOT55_05685 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D OOT55_11050 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D OOT55_01220 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D OOT55_01225 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:mke00660]
D OOT55_01220 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D OOT55_01225 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D OOT55_06645 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D OOT55_06640 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D OOT55_06170 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D OOT55_06165 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D OOT55_06160 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:mke00562]
D OOT55_03400 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D OOT55_00270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D OOT55_02520 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 00566 Sulfoquinovose metabolism
D OOT55_06355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:mke00190]
D OOT55_17160 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D OOT55_17175 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D OOT55_17180 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D OOT55_17195 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D OOT55_17185 nuoK; NADH-quinone oxidoreductase subunit NuoK K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2]
D OOT55_00990 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D OOT55_06670 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D OOT55_06665 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D OOT55_10830 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D OOT55_06680 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D OOT55_06675 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D OOT55_01930 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D OOT55_01935 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D OOT55_14520 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D OOT55_01500 cytochrome C oxidase subunit IV family protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D OOT55_01505 heme-copper oxidase subunit III family protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D OOT55_14495 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D OOT55_01515 cbb3-type cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D OOT55_14485 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D OOT55_01520 c-type cytochrome K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D OOT55_14480 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D OOT55_14490 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D OOT55_14515 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D OOT55_01380 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D OOT55_01385 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D OOT55_01390 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D OOT55_01395 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D OOT55_08835 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D OOT55_08840 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D OOT55_13900 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D OOT55_13890 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D OOT55_13895 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D OOT55_13905 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D OOT55_13885 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D OOT55_13920 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D OOT55_13910 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D OOT55_13915 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D OOT55_08925 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D OOT55_15125 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:mke00710]
D OOT55_12125 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D OOT55_02975 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D OOT55_15950 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D OOT55_12130 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D OOT55_14960 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D OOT55_00270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D OOT55_02520 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D OOT55_09345 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D OOT55_02675 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D OOT55_11070 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D OOT55_06355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:mke00720]
D OOT55_08055 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D OOT55_11070 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D OOT55_06355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D OOT55_01750 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D OOT55_04730 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D OOT55_06670 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D OOT55_06665 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D OOT55_10830 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D OOT55_06680 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D OOT55_06675 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D OOT55_06640 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D OOT55_06645 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_06630 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D OOT55_02695 acnA; aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D OOT55_05590 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D OOT55_07240 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D OOT55_02060 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D OOT55_02055 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D OOT55_06125 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D OOT55_06255 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D OOT55_12150 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D OOT55_12295 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D OOT55_12290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D OOT55_16770 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:mke00680]
D OOT55_00415 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D OOT55_00420 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D OOT55_16730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D OOT55_06815 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D OOT55_11070 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D OOT55_06355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D OOT55_15950 class I fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D OOT55_15955 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D OOT55_05635 glutamate synthase-related protein K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D OOT55_12290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D OOT55_12295 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D OOT55_16770 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D OOT55_08055 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D OOT55_11730 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D OOT55_03820 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D OOT55_11965 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D OOT55_03815 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D OOT55_11115 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D OOT55_05265 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
C 00910 Nitrogen metabolism [PATH:mke00910]
D OOT55_08405 acetamidase/formamidase family protein K01455 fmdA; formamidase [EC:3.5.1.49]
D OOT55_10645 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D OOT55_15790 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D OOT55_13230 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D OOT55_13235 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D OOT55_13240 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D OOT55_10505 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_10500 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_10490 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_13195 napA; nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D OOT55_13200 nitrate reductase cytochrome c-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D OOT55_15620 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D OOT55_15610 nirB; nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D OOT55_15605 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D OOT55_10865 multicopper oxidase domain-containing protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D OOT55_10935 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D OOT55_05690 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D OOT55_10930 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D OOT55_15975 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D OOT55_11385 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D OOT55_11380 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D OOT55_01360 can; carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:mke00920]
D OOT55_04465 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D OOT55_04185 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D OOT55_04180 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D OOT55_04470 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D OOT55_08690 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D OOT55_05270 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D OOT55_10805 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D OOT55_06425 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D OOT55_10810 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D OOT55_10800 NAD(P)/FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D OOT55_13530 FAD-dependent oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D OOT55_08125 c-type cytochrome K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D OOT55_10265 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D OOT55_08940 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D OOT55_10075 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D OOT55_11875 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D OOT55_06100 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:mke00061]
D OOT55_07240 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D OOT55_02060 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D OOT55_02055 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D OOT55_06125 accD; acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D OOT55_05455 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D OOT55_05465 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D OOT55_03695 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D OOT55_00940 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D OOT55_05450 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D OOT55_05460 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D OOT55_00945 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D OOT55_07265 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D OOT55_02155 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D OOT55_06465 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:mke00071]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_05370 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D OOT55_14675 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D OOT55_06465 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D OOT55_00415 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D OOT55_05455 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D OOT55_05465 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:mke00561]
D OOT55_08825 phosphoribulokinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D OOT55_17520 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D OOT55_05470 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D OOT55_13370 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D OOT55_07405 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:mke00564]
D OOT55_06230 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D OOT55_01295 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D OOT55_13370 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D OOT55_07405 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D OOT55_17080 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D OOT55_09445 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D OOT55_07295 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D OOT55_01265 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D OOT55_11365 asd; archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D OOT55_04780 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D OOT55_00150 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D OOT55_10060 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:mke00565]
D OOT55_17080 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:mke00600]
D OOT55_13860 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D OOT55_17080 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D OOT55_17080 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:mke00592]
D OOT55_17080 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D OOT55_05370 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
D OOT55_13755 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:mke00230]
D OOT55_11030 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D OOT55_15730 nudE; ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D OOT55_12945 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D OOT55_09120 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D OOT55_17230 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D OOT55_06105 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D OOT55_02025 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D OOT55_01545 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D OOT55_07035 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D OOT55_01550 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D OOT55_10360 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D OOT55_10365 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D OOT55_02135 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D OOT55_03150 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D OOT55_02030 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D OOT55_04815 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D OOT55_08185 nadN; NAD nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D OOT55_15735 yrfG; GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D OOT55_01205 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D OOT55_05880 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D OOT55_03525 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D OOT55_03455 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D OOT55_11905 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D OOT55_15455 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D OOT55_15460 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D OOT55_03530 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D OOT55_15480 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D OOT55_13255 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D OOT55_08145 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D OOT55_10710 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D OOT55_08150 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D OOT55_10740 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D OOT55_17475 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D OOT55_13265 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D OOT55_15120 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D OOT55_06925 relA; GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D OOT55_07550 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D OOT55_13615 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D OOT55_10185 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D OOT55_15505 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D OOT55_02470 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D OOT55_02885 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D OOT55_06920 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D OOT55_11020 cpdA; 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D OOT55_09405 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D OOT55_04465 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D OOT55_04185 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D OOT55_04180 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D OOT55_04470 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D OOT55_15475 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D OOT55_15500 puuE; allantoinase PuuE K16842 hpxB; allantoinase [EC:3.5.2.5]
D OOT55_15575 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D OOT55_15570 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00240 Pyrimidine metabolism [PATH:mke00240]
D OOT55_00235 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D OOT55_00230 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D OOT55_01305 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D OOT55_07010 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D OOT55_05620 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D OOT55_12965 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D OOT55_04200 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D OOT55_07310 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D OOT55_03455 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D OOT55_06920 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D OOT55_08340 Maf family nucleotide pyrophosphatase K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D OOT55_06825 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D OOT55_04205 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D OOT55_04815 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D OOT55_08185 nadN; NAD nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D OOT55_02470 ppnN; nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D OOT55_10740 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D OOT55_01490 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D OOT55_08145 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D OOT55_10710 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D OOT55_08150 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D OOT55_04405 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D OOT55_17235 thymidine phosphorylase family protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D OOT55_11560 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:mke00250]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D OOT55_07445 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D OOT55_06185 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D OOT55_07605 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D OOT55_06520 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D OOT55_01375 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D OOT55_13655 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D OOT55_10185 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D OOT55_03150 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D OOT55_01305 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D OOT55_05675 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D OOT55_17495 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D OOT55_05685 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D OOT55_11385 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D OOT55_11380 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D OOT55_05690 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D OOT55_10930 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D OOT55_15975 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D OOT55_00235 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D OOT55_00230 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D OOT55_00505 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D OOT55_13835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D OOT55_06105 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:mke00260]
D OOT55_03000 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D OOT55_04795 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D OOT55_06155 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D OOT55_03730 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D OOT55_05265 thrH; bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]
D OOT55_03735 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D OOT55_16730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D OOT55_11730 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D OOT55_08825 phosphoribulokinase K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31]
D OOT55_03820 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D OOT55_11965 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D OOT55_03815 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D OOT55_11115 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D OOT55_02660 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D OOT55_15350 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_15345 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D OOT55_01265 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D OOT55_10755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D OOT55_14965 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D OOT55_06130 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D OOT55_06135 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D OOT55_02375 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D OOT55_04790 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D OOT55_05205 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D OOT55_03170 phytanoyl-CoA dioxygenase family protein K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
C 00270 Cysteine and methionine metabolism [PATH:mke00270]
D OOT55_08940 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D OOT55_10075 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D OOT55_10755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D OOT55_04250 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D OOT55_02195 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D OOT55_12140 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D OOT55_01205 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D OOT55_04160 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D OOT55_16475 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D OOT55_12145 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D OOT55_03000 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D OOT55_04795 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D OOT55_06155 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D OOT55_03730 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D OOT55_11875 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D OOT55_10510 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D OOT55_06100 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D OOT55_11485 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D OOT55_15075 gshA; glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D OOT55_10265 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D OOT55_06355 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D OOT55_06935 cysM; cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D OOT55_03820 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D OOT55_11965 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D OOT55_03815 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:mke00280]
D OOT55_11485 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D OOT55_05370 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D OOT55_17495 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D OOT55_11050 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:mke00290]
D OOT55_14965 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D OOT55_06170 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D OOT55_06165 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D OOT55_06160 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D OOT55_01220 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D OOT55_01225 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D OOT55_01260 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D OOT55_08390 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D OOT55_11520 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D OOT55_11485 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D OOT55_07470 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D OOT55_07605 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D OOT55_14020 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:mke00300]
D OOT55_03730 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D OOT55_03000 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D OOT55_04795 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D OOT55_06155 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D OOT55_01660 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D OOT55_09260 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D OOT55_00160 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D OOT55_07805 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D OOT55_01770 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D OOT55_07340 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D OOT55_07810 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D OOT55_13585 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D OOT55_13590 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D OOT55_08550 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D OOT55_08545 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:mke00310]
D OOT55_06655 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_17495 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D OOT55_05685 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D OOT55_02145 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:mke00220]
D OOT55_01765 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D OOT55_01375 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D OOT55_13655 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D OOT55_10280 uca; urea carboxylase K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26]
D OOT55_17465 uca; urea carboxylase K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26]
D OOT55_17470 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D OOT55_15975 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D OOT55_00235 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D OOT55_00230 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D OOT55_05690 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D OOT55_10930 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D OOT55_07605 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D OOT55_11515 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D OOT55_08480 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D OOT55_12950 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D OOT55_00600 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D OOT55_01770 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D OOT55_11510 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:mke00330]
D OOT55_03180 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D OOT55_05555 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D OOT55_03185 saccharopine dehydrogenase family protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D OOT55_03190 nspC; carboxynorspermidine decarboxylase K27684 capadc; carboxyaminopropylagmatine decarboxylase [EC:4.1.1.127]
D OOT55_02380 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D OOT55_08415 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_15555 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_11860 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D OOT55_08860 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D OOT55_09605 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D OOT55_16070 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:mke00340]
D OOT55_01890 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D OOT55_10190 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D OOT55_11250 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D OOT55_11245 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D OOT55_11760 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D OOT55_11765 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D OOT55_11755 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D OOT55_11770 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D OOT55_09360 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D OOT55_11580 HAD family phosphatase K28842 E3.1.3.15; histidinol-phosphatase [EC:3.1.3.15]
D OOT55_01895 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D OOT55_15075 gshA; glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
C 00350 Tyrosine metabolism [PATH:mke00350]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D OOT55_09360 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D OOT55_00415 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D OOT55_05685 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:mke00360]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D OOT55_09360 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D OOT55_05645 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D OOT55_08415 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_15555 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_04580 aldolase catalytic domain-containing protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:mke00380]
D OOT55_06655 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_08415 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_15555 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_05645 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:mke00400]
D OOT55_04300 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D OOT55_07510 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D OOT55_11400 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D OOT55_02065 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D OOT55_14145 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D OOT55_02865 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D OOT55_11405 aroK; shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71]
D OOT55_04175 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D OOT55_06190 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D OOT55_09340 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D OOT55_09335 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D OOT55_09330 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D OOT55_06140 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D OOT55_09325 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D OOT55_06130 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D OOT55_06135 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D OOT55_04170 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D OOT55_09360 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:mke00410]
D OOT55_16765 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D OOT55_05675 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D OOT55_17495 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D OOT55_16760 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:mke00430]
D OOT55_01570 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D OOT55_15560 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D OOT55_06520 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D OOT55_05690 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D OOT55_12295 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D OOT55_12290 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:mke00450]
D OOT55_04250 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D OOT55_02195 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D OOT55_10755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D OOT55_03435 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D OOT55_06595 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D OOT55_04465 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D OOT55_04185 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D OOT55_04180 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D OOT55_04470 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D OOT55_10790 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D OOT55_01475 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:mke00460]
D OOT55_06380 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_12010 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_15270 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_01570 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D OOT55_15560 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D OOT55_16730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D OOT55_08405 acetamidase/formamidase family protein K01455 fmdA; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:mke00470]
D OOT55_00670 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D OOT55_08515 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D OOT55_04320 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D OOT55_08535 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D OOT55_13585 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D OOT55_13590 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D OOT55_09280 aldehyde dehydrogenase (NADP(+)) K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00480 Glutathione metabolism [PATH:mke00480]
D OOT55_01570 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D OOT55_15560 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D OOT55_11635 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D OOT55_15075 gshA; glutamate--cysteine ligase K01919 gshA; glutamate---cysteine ligase [EC:6.3.2.2]
D OOT55_11825 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D OOT55_03230 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D OOT55_04390 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D OOT55_14365 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D OOT55_06540 gorA; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D OOT55_06630 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D OOT55_10250 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D OOT55_02960 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D OOT55_02380 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mke00520]
D OOT55_00620 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D OOT55_04150 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D OOT55_09435 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D OOT55_09440 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D OOT55_13880 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D OOT55_01885 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D OOT55_05750 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D OOT55_13820 glycosyl hydrolase family 18 protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D OOT55_13860 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D OOT55_00500 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D OOT55_00470 ATPase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D OOT55_00265 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D OOT55_00505 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D OOT55_13835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D OOT55_09210 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D OOT55_16295 ROK family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D OOT55_02945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D OOT55_04270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D OOT55_00405 alpha-N-arabinofuranosidase K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D OOT55_16390 glycoside hydrolase family 43 protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D OOT55_14730 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D OOT55_12945 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D OOT55_04215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D OOT55_04445 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D OOT55_00325 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D OOT55_13295 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D OOT55_00320 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D OOT55_13300 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D OOT55_00315 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D OOT55_09635 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D OOT55_13310 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D OOT55_04210 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8]
D OOT55_04220 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D OOT55_05185 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D OOT55_04530 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
C 00541 Biosynthesis of various nucleotide sugars [PATH:mke00541]
D OOT55_13880 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D OOT55_14735 tviB; Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D OOT55_04665 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D OOT55_04640 NAD-dependent epimerase/dehydratase family protein K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
D OOT55_01865 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D OOT55_06820 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D OOT55_01860 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D OOT55_05760 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D OOT55_08600 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D OOT55_13365 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D OOT55_04215 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D OOT55_04445 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D OOT55_04530 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D OOT55_04520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D OOT55_04550 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D OOT55_00935 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D OOT55_04525 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D OOT55_04220 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D OOT55_04270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:mke00511]
D OOT55_13860 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D OOT55_16405 glycoside hydrolase family 95 protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis [PATH:mke00540]
D OOT55_07260 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D OOT55_08495 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D OOT55_07270 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D OOT55_04395 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D OOT55_07255 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D OOT55_05765 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D OOT55_11225 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D OOT55_02165 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D OOT55_11005 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D OOT55_10680 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D OOT55_10965 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
C 00542 O-Antigen repeat unit biosynthesis
C 00550 Peptidoglycan biosynthesis [PATH:mke00550]
D OOT55_01885 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D OOT55_05750 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D OOT55_08520 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D OOT55_08535 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D OOT55_08550 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D OOT55_08515 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D OOT55_08545 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D OOT55_07300 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D OOT55_02900 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D OOT55_07410 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D OOT55_08540 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D OOT55_08525 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D OOT55_11435 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D OOT55_09070 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D OOT55_16170 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D OOT55_08530 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_09580 rodA; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_09585 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D OOT55_08555 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D OOT55_09565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:mke00552]
D OOT55_02900 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D OOT55_07410 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D OOT55_04665 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:mke00543]
D OOT55_08940 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D OOT55_10075 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:mke00730]
D OOT55_11035 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D OOT55_11040 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D OOT55_03415 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D OOT55_15980 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D OOT55_03515 thiO; glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19]
D OOT55_10115 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D OOT55_03505 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D OOT55_00580 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D OOT55_00145 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D OOT55_10260 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D OOT55_02885 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:mke00740]
D OOT55_00155 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D OOT55_00130 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D OOT55_00120 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D OOT55_00135 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D OOT55_00125 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D OOT55_01120 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D OOT55_11030 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D OOT55_11220 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:mke00750]
D OOT55_07145 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D OOT55_07615 4-phosphoerythronate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D OOT55_03815 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D OOT55_09420 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D OOT55_06060 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D OOT55_03735 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:mke00760]
D OOT55_07445 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D OOT55_01655 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D OOT55_01690 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D OOT55_04815 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D OOT55_08185 nadN; NAD nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D OOT55_09600 nadD; nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D OOT55_06920 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D OOT55_05295 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D OOT55_01190 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D OOT55_06755 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D OOT55_04370 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D OOT55_05820 sthA; Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D OOT55_15900 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D OOT55_15905 NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D OOT55_15910 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D OOT55_05685 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:mke00770]
D OOT55_01220 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D OOT55_01225 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D OOT55_01260 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D OOT55_08390 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D OOT55_11520 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D OOT55_09020 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D OOT55_16760 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D OOT55_12940 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D OOT55_06920 mazG; nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D OOT55_12740 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D OOT55_08750 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D OOT55_11485 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D OOT55_16765 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:mke00780]
D OOT55_00940 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D OOT55_05450 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D OOT55_05460 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D OOT55_07265 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D OOT55_10025 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D OOT55_02930 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D OOT55_10015 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D OOT55_10030 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D OOT55_00675 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:mke00785]
D OOT55_09555 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D OOT55_09550 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_07185 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D OOT55_07180 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D OOT55_06660 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D OOT55_06655 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D OOT55_02660 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D OOT55_15350 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D OOT55_15345 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:mke00790]
D OOT55_11130 NUDIX domain-containing protein K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D OOT55_09500 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D OOT55_09010 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D OOT55_09495 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D OOT55_00260 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D OOT55_11555 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D OOT55_06120 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D OOT55_00155 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D OOT55_00130 ribBA; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D OOT55_05260 pabB; aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D OOT55_05445 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D OOT55_01340 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D OOT55_09480 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D OOT55_01635 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D OOT55_01640 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D OOT55_07555 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D OOT55_10690 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D OOT55_02700 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D OOT55_02710 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D OOT55_10695 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D OOT55_10660 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D OOT55_10425 nucleotidyltransferase family protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D OOT55_07150 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:mke00670]
D OOT55_11555 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D OOT55_06255 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D OOT55_16730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D OOT55_01545 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D OOT55_02030 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D OOT55_15350 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D OOT55_04250 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D OOT55_11560 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D OOT55_08135 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D OOT55_12150 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D OOT55_14975 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D OOT55_12140 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D OOT55_12145 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D OOT55_02660 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_15345 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D OOT55_10755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:mke00860]
D OOT55_02725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D OOT55_09095 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D OOT55_00575 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D OOT55_04965 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D OOT55_13675 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D OOT55_11375 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D OOT55_14140 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D OOT55_10355 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D OOT55_00590 hemJ; protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D OOT55_16045 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D OOT55_06560 cysG; siroheme synthase CysG K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D OOT55_15615 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D OOT55_14520 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D OOT55_14515 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D OOT55_03645 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D OOT55_02360 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D OOT55_10405 ferritin-like domain-containing protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mke00130]
D OOT55_02435 ybgC; tol-pal system-associated acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D OOT55_12795 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D OOT55_14920 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D OOT55_11220 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D OOT55_15010 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D OOT55_10720 U32 family peptidase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D OOT55_10715 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D OOT55_10725 SCP2 sterol-binding domain-containing protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT
D OOT55_04155 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D OOT55_15005 ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D OOT55_16095 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D OOT55_09310 coq7; 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase K06134 coq7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D OOT55_07480 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:mke00900]
D OOT55_10115 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D OOT55_07290 ispC; 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D OOT55_06805 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D OOT55_09110 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D OOT55_06800 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D OOT55_03475 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D OOT55_01140 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_11220 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D OOT55_10110 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D OOT55_00950 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D OOT55_07300 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:mke00907]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D OOT55_11050 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D OOT55_05370 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D OOT55_12130 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:mke00523]
D OOT55_04530 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D OOT55_04520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D OOT55_04550 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D OOT55_00935 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D OOT55_04525 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D OOT55_04520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:mke00946]
D OOT55_06380 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_12010 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_15270 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:mke00332]
D OOT55_08860 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D OOT55_09605 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:mke00261]
D OOT55_04465 cysN; sulfate adenylyltransferase subunit CysN K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25]
D OOT55_04185 cysN; sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D OOT55_04180 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D OOT55_04470 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D OOT55_03000 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D OOT55_04795 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D OOT55_06155 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D OOT55_01660 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D OOT55_09260 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D OOT55_00160 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:mke00521]
D OOT55_12945 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D OOT55_03400 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D OOT55_04530 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D OOT55_04520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D OOT55_04550 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D OOT55_00935 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D OOT55_04525 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:mke00525]
D OOT55_04530 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D OOT55_04520 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:mke00401]
D OOT55_04175 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D OOT55_09360 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
D OOT55_00010 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_01235 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_06700 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_09170 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_09180 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_12030 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_12035 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_12465 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_13175 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_13220 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_13845 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_13850 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_17735 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_17740 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D OOT55_17755 tryptophan 7-halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
C 00405 Phenazine biosynthesis
D OOT55_09340 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D OOT55_09335 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D OOT55_05465 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D OOT55_05460 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00975 Biosynthesis of various siderophores [PATH:mke00975]
D OOT55_02375 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D OOT55_16120 hypothetical protein K24109 asbB; 3,4-dihydroxybenzoyl-citryl-spermidine/N-citryl-spermidine--spermidine ligase [EC:6.3.2.-]
D OOT55_16130 acyl carrier protein K24112 asbE; petrobactin synthase [EC:2.-.-.-]
D OOT55_16135 sugar phosphate isomerase/epimerase K15652 asbF; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D OOT55_16125 AMP-binding protein K24110 asbC; 3,4-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.2.1.62]
C 00998 Biosynthesis of various antibiotics
D OOT55_05455 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:mke00999]
D OOT55_12140 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D OOT55_14145 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D OOT55_06380 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_12010 putative glycoside hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D OOT55_15270 bglX; beta-glucosidase BglX K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:mke00362]
D OOT55_05370 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D OOT55_04580 aldolase catalytic domain-containing protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D OOT55_10555 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D OOT55_02435 ybgC; tol-pal system-associated acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_01590 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:mke00627]
D OOT55_08415 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_15555 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_15290 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D OOT55_11220 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D OOT55_08045 wrbA; NAD(P)H:quinone oxidoreductase K23528 pnpB; p-benzoquinone reductase (NADPH) [EC:1.6.5.6]
C 00364 Fluorobenzoate degradation [PATH:mke00364]
D OOT55_05600 dienelactone hydrolase family protein K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:mke00625]
D OOT55_00415 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:mke00361]
D OOT55_05600 dienelactone hydrolase family protein K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:mke00623]
D OOT55_05600 dienelactone hydrolase family protein K01061 clcD; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:mke00622]
D OOT55_10555 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D OOT55_04580 aldolase catalytic domain-containing protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D OOT55_05370 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:mke00643]
D OOT55_08415 aliphatic amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D OOT55_15555 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation [PATH:mke00791]
D OOT55_17470 atzF; allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D OOT55_10280 uca; urea carboxylase K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26]
D OOT55_17465 uca; urea carboxylase K01941 uca; urea/guanidine carboxylase [EC:6.3.4.6 6.3.4.26]
D OOT55_10290 urea carboxylase-associated family protein K28692 cgdA; carboxyguanidine deiminase [EC:3.5.1.140]
D OOT55_10285 urea carboxylase-associated family protein K28693 cgdB; carboxyguanidine deiminase [EC:3.5.1.140]
C 00930 Caprolactam degradation [PATH:mke00930]
D OOT55_05375 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D OOT55_05165 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:mke00621]
D OOT55_10555 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D OOT55_04580 aldolase catalytic domain-containing protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation [PATH:mke00626]
D OOT55_00415 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:mke00984]
D OOT55_05370 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:mke03020]
D OOT55_00750 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D OOT55_00755 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D OOT55_00910 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D OOT55_13260 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D OOT55_05045 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:mke03010]
D OOT55_00635 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D OOT55_01270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D OOT55_00650 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D OOT55_01285 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D OOT55_00655 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D OOT55_01290 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D OOT55_04225 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D OOT55_07320 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D OOT55_00815 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D OOT55_00905 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D OOT55_00870 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D OOT55_16735 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D OOT55_00765 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D OOT55_00855 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D OOT55_01925 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D OOT55_00780 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D OOT55_00900 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D OOT55_00760 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D OOT55_00895 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D OOT55_00850 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D OOT55_09960 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D OOT55_03700 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D OOT55_00830 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D OOT55_16740 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D OOT55_00805 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D OOT55_08785 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D OOT55_09510 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D OOT55_00735 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D OOT55_00800 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D OOT55_00785 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D OOT55_00790 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D OOT55_00845 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D OOT55_00860 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D OOT55_16750 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D OOT55_00740 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D OOT55_00730 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D OOT55_00745 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D OOT55_01920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D OOT55_00835 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D OOT55_00880 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D OOT55_00820 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D OOT55_00915 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D OOT55_00865 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D OOT55_03715 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D OOT55_03580 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D OOT55_08875 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D OOT55_00810 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D OOT55_00795 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D OOT55_00840 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D OOT55_09125 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D OOT55_08870 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D OOT55_12930 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D OOT55_00825 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D OOT55_00875 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D OOT55_11445 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D OOT55_05475 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D OOT55_12925 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D OOT55_13985 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D OOT55_03575 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D OOT55_00890 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:mke00970]
D OOT55_00645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D OOT55_01280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D OOT55_02730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D OOT55_06245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D OOT55_06505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D OOT55_07535 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D OOT55_14720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D OOT55_06290 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D OOT55_04355 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D OOT55_04920 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D OOT55_04775 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D OOT55_09115 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D OOT55_07580 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D OOT55_07590 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D OOT55_00700 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D OOT55_07575 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D OOT55_07585 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D OOT55_06250 tRNA-His K14226 tRNA-His; tRNA His
D OOT55_00640 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D OOT55_01275 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D OOT55_00025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_00280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_03370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_04770 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_05360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_01645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D OOT55_01650 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D OOT55_00455 tRNA-Ile K14230 tRNA-Met; tRNA Met
D OOT55_09155 tRNA-Met K14230 tRNA-Met; tRNA Met
D OOT55_09990 tRNA-Met K14230 tRNA-Met; tRNA Met
D OOT55_15395 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D OOT55_03605 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D OOT55_06240 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D OOT55_09060 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D OOT55_03010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D OOT55_05505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D OOT55_07540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D OOT55_00690 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D OOT55_00705 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D OOT55_13955 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D OOT55_00715 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D OOT55_00695 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D OOT55_04350 tRNA-Val K14237 tRNA-Val; tRNA Val
D OOT55_04680 tRNA-Val K14237 tRNA-Val; tRNA Val
D OOT55_04925 tRNA-Val K14237 tRNA-Val; tRNA Val
D OOT55_02725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D OOT55_05665 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D OOT55_08365 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D OOT55_08370 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D OOT55_08360 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D OOT55_05435 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D OOT55_02995 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D OOT55_02410 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D OOT55_13355 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D OOT55_13360 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D OOT55_03565 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D OOT55_06565 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D OOT55_05430 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D OOT55_01475 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D OOT55_14105 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D OOT55_03020 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D OOT55_08890 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D OOT55_01125 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D OOT55_03795 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D OOT55_01330 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D OOT55_06730 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D OOT55_03480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D OOT55_03585 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D OOT55_03590 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D OOT55_00630 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D OOT55_02925 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes [PATH:mke03008]
D OOT55_06980 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D OOT55_10255 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:mke03060]
D OOT55_00885 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D OOT55_00720 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D OOT55_00275 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D OOT55_03385 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D OOT55_03390 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D OOT55_05150 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D OOT55_05540 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D OOT55_13970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D OOT55_08485 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D OOT55_11715 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D OOT55_05410 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D OOT55_02220 ffs; signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
D OOT55_12730 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D OOT55_11255 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D OOT55_11265 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D OOT55_06990 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D OOT55_01130 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D OOT55_13085 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum [PATH:mke04141]
D OOT55_06375 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D OOT55_09485 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:mke04122]
D OOT55_03415 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D OOT55_10265 rhodanese-like domain-containing protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D OOT55_07635 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D OOT55_05525 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D OOT55_05520 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D OOT55_05515 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D OOT55_05530 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D OOT55_03160 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D OOT55_02710 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D OOT55_10690 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D OOT55_02705 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D OOT55_09080 molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D OOT55_02700 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D OOT55_10695 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D OOT55_15980 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D OOT55_03510 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:mke03018]
D OOT55_11575 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D OOT55_05500 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D OOT55_08385 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D OOT55_06815 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D OOT55_09955 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D OOT55_03945 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D OOT55_00030 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D OOT55_06335 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D OOT55_12845 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D OOT55_17405 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D OOT55_14925 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D OOT55_10140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D OOT55_01735 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10390 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10215 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D OOT55_15125 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D OOT55_09005 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:mke03030]
D OOT55_05305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_16410 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_07245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D OOT55_02225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D OOT55_04420 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D OOT55_08900 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D OOT55_03225 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D OOT55_13995 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D OOT55_16755 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D OOT55_09520 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D OOT55_00930 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D OOT55_05310 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D OOT55_07250 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D OOT55_14610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D OOT55_04950 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:mke03410]
D OOT55_07345 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D OOT55_02385 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D OOT55_15370 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D OOT55_12780 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D OOT55_15330 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D OOT55_15300 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D OOT55_06695 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D OOT55_12970 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D OOT55_14610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D OOT55_03740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D OOT55_04950 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:mke03420]
D OOT55_05865 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D OOT55_00920 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D OOT55_16500 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D OOT55_04740 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D OOT55_04760 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D OOT55_13780 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D OOT55_14610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D OOT55_04950 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D OOT55_05045 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:mke03430]
D OOT55_06760 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D OOT55_10225 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D OOT55_13780 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D OOT55_01365 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D OOT55_03520 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D OOT55_10105 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D OOT55_03740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D OOT55_00930 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D OOT55_07245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D OOT55_13995 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D OOT55_02225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D OOT55_08900 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D OOT55_04420 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D OOT55_05305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_16410 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_03225 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D OOT55_04950 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:mke03440]
D OOT55_03740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D OOT55_00930 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D OOT55_14000 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D OOT55_06970 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D OOT55_02235 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D OOT55_06750 recA; recombinase RecA K03553 recA; recombination protein RecA
D OOT55_14610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D OOT55_02425 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D OOT55_02430 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D OOT55_02420 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D OOT55_12825 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D OOT55_13030 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D OOT55_07245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D OOT55_13995 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D OOT55_02225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D OOT55_08900 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D OOT55_04420 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D OOT55_05305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_16410 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_03225 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D OOT55_11450 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:mke03250]
D OOT55_06055 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus and Alphavirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03273 Virion - Lassa virus and SFTS virus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:mke02010]
D OOT55_13230 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D OOT55_13235 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D OOT55_13240 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D OOT55_14445 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D OOT55_14455 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D OOT55_14460 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D OOT55_15360 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D OOT55_15355 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D OOT55_01760 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D OOT55_01875 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D OOT55_00215 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D OOT55_00225 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D OOT55_00220 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D OOT55_15435 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D OOT55_15445 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D OOT55_15440 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D OOT55_15450 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D OOT55_01955 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D OOT55_14440 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D OOT55_01960 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D OOT55_01965 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D OOT55_01970 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D OOT55_10470 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D OOT55_10480 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D OOT55_10475 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D OOT55_08440 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D OOT55_17455 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D OOT55_08435 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D OOT55_17450 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D OOT55_08430 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D OOT55_17445 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D OOT55_08425 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D OOT55_17440 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D OOT55_08420 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D OOT55_17435 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D OOT55_12500 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D OOT55_12505 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D OOT55_12510 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D OOT55_12515 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D OOT55_14585 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D OOT55_14590 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D OOT55_10460 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D OOT55_10455 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D OOT55_06450 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D OOT55_05795 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D OOT55_05805 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D OOT55_15690 ABC transporter permease K09808 lolC_E_F; lipoprotein-releasing system permease protein
D OOT55_05800 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D OOT55_15695 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D OOT55_04895 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D OOT55_04890 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D OOT55_04885 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D OOT55_03235 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D OOT55_03240 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D OOT55_01845 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D OOT55_12720 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D OOT55_12725 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D OOT55_11480 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D OOT55_13475 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D OOT55_12435 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D OOT55_07060 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D OOT55_04705 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D OOT55_04285 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:mke02060]
D OOT55_11570 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D OOT55_01820 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D OOT55_01830 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:mke03070]
D OOT55_11045 TolC family outer membrane protein K12340 tolC; outer membrane protein
D OOT55_13475 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D OOT55_12690 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D OOT55_12695 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D OOT55_12680 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D OOT55_12675 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D OOT55_12670 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D OOT55_12665 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D OOT55_12660 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D OOT55_12655 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D OOT55_12650 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D OOT55_12645 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D OOT55_11495 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D OOT55_12685 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D OOT55_03385 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D OOT55_05150 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D OOT55_03390 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D OOT55_00720 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D OOT55_00275 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D OOT55_00885 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D OOT55_05540 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D OOT55_13970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D OOT55_08485 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D OOT55_12730 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D OOT55_11715 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D OOT55_05410 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D OOT55_11255 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D OOT55_11265 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D OOT55_16685 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D OOT55_16680 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D OOT55_16620 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D OOT55_16635 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D OOT55_16630 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK
D OOT55_16575 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D OOT55_16615 tagH; type VI secretion system-associated FHA domain protein TagH K11913 fha1; type VI secretion system protein
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:mke02020]
D OOT55_12785 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D OOT55_12790 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D OOT55_01955 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D OOT55_14440 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D OOT55_09620 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D OOT55_09615 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D OOT55_06000 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D OOT55_00520 winged helix-turn-helix domain-containing protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D OOT55_07000 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D OOT55_12390 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D OOT55_12395 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D OOT55_16925 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D OOT55_17115 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D OOT55_16930 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D OOT55_17120 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D OOT55_17275 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D OOT55_12365 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D OOT55_17280 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D OOT55_12370 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D OOT55_17285 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D OOT55_12225 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D OOT55_12220 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D OOT55_03905 flagellin K02406 fliC; flagellin
D OOT55_04090 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D OOT55_04115 flagellar motor protein K02556 motA; chemotaxis protein MotA
D OOT55_10100 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D OOT55_09275 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D OOT55_14515 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D OOT55_13990 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D OOT55_05390 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D OOT55_13660 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D OOT55_13665 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D OOT55_06450 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D OOT55_10655 narL; two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D OOT55_10505 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_10500 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_10490 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_10495 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D OOT55_04750 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D OOT55_03005 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D OOT55_07335 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D OOT55_12235 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D OOT55_17360 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D OOT55_15965 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D OOT55_15960 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D OOT55_15975 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D OOT55_09000 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_01185 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D OOT55_01180 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D OOT55_01840 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D OOT55_08730 pilin K02650 pilA; type IV pilus assembly protein PilA
D OOT55_16830 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D OOT55_06480 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D OOT55_01000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_09790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_12385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_14955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_06535 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D OOT55_04130 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D OOT55_04135 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D OOT55_04105 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D OOT55_04095 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D OOT55_04110 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D OOT55_05945 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_06485 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_13330 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_11800 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK
D OOT55_11805 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D OOT55_11810 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D OOT55_11795 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D OOT55_11820 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D OOT55_11815 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D OOT55_11790 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D OOT55_11785 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D OOT55_02815 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D OOT55_13775 dctP; TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D OOT55_15915 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D OOT55_02820 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D OOT55_13745 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D OOT55_15920 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D OOT55_02825 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D OOT55_13750 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D OOT55_15925 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D OOT55_03930 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D OOT55_03955 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D OOT55_03960 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D OOT55_09320 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D OOT55_08665 response regulator K15012 regA; two-component system, response regulator RegA
D OOT55_01930 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D OOT55_01935 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D OOT55_01380 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D OOT55_01385 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D OOT55_01390 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D OOT55_01395 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D OOT55_08835 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D OOT55_08840 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D OOT55_11045 TolC family outer membrane protein K12340 tolC; outer membrane protein
D OOT55_14745 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D OOT55_05755 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D OOT55_15945 pectinesterase family protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D OOT55_01565 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D OOT55_12855 glycoside hydrolase family 9 protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D OOT55_12865 glycoside hydrolase family 6 protein K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91]
D OOT55_04025 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D OOT55_04020 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D OOT55_04015 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D OOT55_06495 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04082 Neuroactive ligand signaling
C 04081 Hormone signaling
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecule (CAM) interaction
C 04517 IgSF CAM signaling
C 04518 Integrin signaling
C 04519 Cadherin signaling
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagocytosis
C 04142 Lysosome biogenesis
D OOT55_13860 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 04146 Peroxisome [PATH:mke04146]
D OOT55_06465 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D OOT55_05295 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D OOT55_06630 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D OOT55_11050 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D OOT55_01740 superoxide dismutase [Fe] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
C 04149 Peroxisome - yeast
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:mke04148]
D OOT55_02380 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D OOT55_01930 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
C 04156 Integrated stress response (ISR) signaling pathway [PATH:mke04156]
D OOT55_06375 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D OOT55_00455 tRNA-Ile K14230 tRNA-Met; tRNA Met
D OOT55_09155 tRNA-Met K14230 tRNA-Met; tRNA Met
D OOT55_09990 tRNA-Met K14230 tRNA-Met; tRNA Met
D OOT55_10140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D OOT55_01735 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10390 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:mke02024]
D OOT55_10215 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D OOT55_09340 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D OOT55_09335 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D OOT55_04300 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D OOT55_12225 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D OOT55_12220 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D OOT55_16830 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D OOT55_14395 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D OOT55_06465 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D OOT55_09320 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D OOT55_14595 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D OOT55_12870 cellulase family glycosylhydrolase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D OOT55_00155 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D OOT55_00120 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D OOT55_00435 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D OOT55_04290 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D OOT55_13970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D OOT55_05150 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D OOT55_00720 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D OOT55_00275 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D OOT55_00885 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D OOT55_05540 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D OOT55_08485 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D OOT55_12730 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D OOT55_11715 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D OOT55_05410 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:mke02030]
D OOT55_01000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_09790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_12385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_14955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_06535 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D OOT55_04105 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D OOT55_04130 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D OOT55_04135 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D OOT55_04095 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D OOT55_04100 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D OOT55_04110 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D OOT55_05945 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_06485 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_13330 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_06480 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D OOT55_03995 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D OOT55_04040 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D OOT55_04045 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D OOT55_04115 flagellar motor protein K02556 motA; chemotaxis protein MotA
D OOT55_10100 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D OOT55_04120 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D OOT55_10095 MotB family protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:mke02040]
D OOT55_03985 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D OOT55_03990 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D OOT55_03995 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D OOT55_04000 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D OOT55_04005 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D OOT55_04010 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D OOT55_04030 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D OOT55_04035 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D OOT55_15080 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D OOT55_04040 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D OOT55_04045 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D OOT55_04050 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D OOT55_04055 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D OOT55_04060 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D OOT55_04065 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D OOT55_04075 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D OOT55_04070 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D OOT55_06490 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D OOT55_03825 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D OOT55_03830 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D OOT55_03835 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D OOT55_03840 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D OOT55_03845 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D OOT55_03850 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D OOT55_03855 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D OOT55_03860 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D OOT55_03865 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D OOT55_03870 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D OOT55_03875 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D OOT55_07005 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D OOT55_03905 flagellin K02406 fliC; flagellin
D OOT55_03915 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D OOT55_03920 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D OOT55_03880 flagellar protein FliT K02423 fliT; flagellar protein FliT
D OOT55_03925 hypothetical protein K02423 fliT; flagellar protein FliT
D OOT55_04115 flagellar motor protein K02556 motA; chemotaxis protein MotA
D OOT55_10100 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D OOT55_04120 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D OOT55_10095 MotB family protein K02557 motB; chemotaxis protein MotB
D OOT55_06495 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D OOT55_06500 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D OOT55_09525 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D OOT55_03930 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D OOT55_01840 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D OOT55_03960 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D OOT55_04090 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D OOT55_06815 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagosome formation
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04981 Folate transport and metabolism [PATH:mke04981]
D OOT55_14975 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
D OOT55_11555 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D OOT55_16730 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D OOT55_11560 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D OOT55_04250 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04980 Cobalamin transport and metabolism
D OOT55_04250 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
C 04382 Cornified envelope formation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:mke01501]
D OOT55_01720 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D OOT55_10670 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D OOT55_10675 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D OOT55_00445 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05020 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05230 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_13525 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_15215 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_00440 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_03040 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_05015 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_05225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_13520 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_15220 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_00435 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D OOT55_04290 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D OOT55_11045 TolC family outer membrane protein K12340 tolC; outer membrane protein
D OOT55_11435 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D OOT55_09585 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D OOT55_08555 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:mke01502]
D OOT55_08515 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D OOT55_00670 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D OOT55_08545 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D OOT55_08540 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D OOT55_08525 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:mke01503]
D OOT55_09620 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D OOT55_09615 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D OOT55_06000 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D OOT55_10230 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D OOT55_07000 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D OOT55_06055 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D OOT55_00445 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05020 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05230 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_13525 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_15215 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_00440 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_03040 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_05015 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_05225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_13520 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_15220 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_11045 TolC family outer membrane protein K12340 tolC; outer membrane protein
D OOT55_07260 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:mke01000]
C 01001 Protein kinases [BR:mke01001]
D OOT55_10640 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D OOT55_12785 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D OOT55_09620 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D OOT55_12390 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D OOT55_16925 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D OOT55_17115 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D OOT55_12225 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D OOT55_13660 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D OOT55_15965 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D OOT55_01185 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D OOT55_04105 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D OOT55_11795 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D OOT55_03955 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:mke01009]
D OOT55_12145 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D OOT55_06375 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D OOT55_05740 protein phosphatase 2C domain-containing protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D OOT55_11115 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:mke01002]
D OOT55_01130 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D OOT55_13085 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D OOT55_08745 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D OOT55_03530 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D OOT55_12435 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D OOT55_06105 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D OOT55_11385 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D OOT55_00505 SIS domain-containing protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D OOT55_13835 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D OOT55_04390 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D OOT55_14245 prlC; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D OOT55_05735 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D OOT55_03230 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D OOT55_07810 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D OOT55_15575 allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D OOT55_07330 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D OOT55_17570 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D OOT55_15000 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D OOT55_00255 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D OOT55_08965 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D OOT55_07205 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D OOT55_07285 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D OOT55_10670 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D OOT55_07000 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D OOT55_01900 trypsin-like peptidase domain-containing protein K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D OOT55_09565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D OOT55_16890 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D OOT55_05350 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D OOT55_05340 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D OOT55_13060 brxL; BREX system Lon protease-like protein BrxL K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D OOT55_05895 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D OOT55_06990 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D OOT55_16070 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D OOT55_06690 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D OOT55_11740 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D OOT55_07490 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-]
D OOT55_05285 sohB; protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-]
D OOT55_04380 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D OOT55_08380 rrtA; rhombosortase K28165 rrtA; rhombosortase
D OOT55_11460 hslV; ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D OOT55_01570 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D OOT55_15560 gamma-glutamyltransferase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D OOT55_10685 yegQ; tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D OOT55_10715 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
D OOT55_10720 U32 family peptidase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
D OOT55_10045 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D OOT55_10200 hflC; protease modulator HflC K04087 hflC; modulator of FtsH protease HflC
D OOT55_10050 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
D OOT55_10205 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:mke01003]
D OOT55_05195 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D OOT55_16170 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D OOT55_09070 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D OOT55_11435 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D OOT55_08530 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_09580 rodA; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_08815 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:mke01005]
D OOT55_07260 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D OOT55_07255 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D OOT55_08495 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D OOT55_07270 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D OOT55_04395 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D OOT55_05765 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D OOT55_02165 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D OOT55_11005 lpxL; LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D OOT55_10680 aspartyl/asparaginyl beta-hydroxylase domain-containing protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D OOT55_11225 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D OOT55_10965 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D OOT55_06820 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D OOT55_05760 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D OOT55_01860 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D OOT55_01865 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D OOT55_08600 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D OOT55_13365 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D OOT55_04660 glycosyltransferase family 4 protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D OOT55_03785 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:mke01011]
D OOT55_01885 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D OOT55_05750 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D OOT55_08520 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D OOT55_08535 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D OOT55_08550 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D OOT55_08515 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D OOT55_00670 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D OOT55_04320 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D OOT55_08540 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D OOT55_08525 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D OOT55_02900 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D OOT55_07410 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D OOT55_01110 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D OOT55_11435 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D OOT55_09070 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D OOT55_16170 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D OOT55_09585 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D OOT55_08555 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D OOT55_09565 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D OOT55_16890 pbpG; D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D OOT55_08530 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_09580 rodA; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_08305 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D OOT55_09575 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D OOT55_05325 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D OOT55_07040 mltF; membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D OOT55_05440 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D OOT55_09570 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D OOT55_10230 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D OOT55_01705 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:mke01004]
D OOT55_05465 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D OOT55_03695 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180]
D OOT55_00940 fabB; beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D OOT55_05450 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D OOT55_05460 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D OOT55_00945 fabA; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D OOT55_07265 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D OOT55_02155 trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D OOT55_13755 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase [EC:3.1.2.-]
D OOT55_16770 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D OOT55_06465 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D OOT55_05470 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D OOT55_13370 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:mke01008]
D OOT55_16125 AMP-binding protein K24110 asbC; 3,4-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.2.1.62]
D OOT55_16130 acyl carrier protein K24112 asbE; petrobactin synthase [EC:2.-.-.-]
C 01006 Prenyltransferases [BR:mke01006]
D OOT55_10110 ispA; (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D OOT55_00950 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D OOT55_07300 uppS; polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D OOT55_10220 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D OOT55_12795 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D OOT55_14520 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:mke01007]
D OOT55_02725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D OOT55_05435 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D OOT55_08985 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D OOT55_00630 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D OOT55_02925 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D OOT55_05430 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D OOT55_01330 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D OOT55_01475 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D OOT55_01125 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D OOT55_03020 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D OOT55_08890 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D OOT55_03795 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D OOT55_02410 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D OOT55_03480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D OOT55_13355 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D OOT55_13360 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D OOT55_06565 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D OOT55_06730 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D OOT55_03565 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D OOT55_02995 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D OOT55_03585 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D OOT55_03590 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D OOT55_09355 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D OOT55_07470 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D OOT55_07605 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D OOT55_07340 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D OOT55_09360 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D OOT55_10025 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D OOT55_01770 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D OOT55_17495 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D OOT55_05675 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D OOT55_02375 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D OOT55_02930 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D OOT55_00575 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D OOT55_11485 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D OOT55_03815 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D OOT55_15570 alanine--glyoxylate aminotransferase family protein K00839 pucG; (S)-ureidoglycine---glyoxylate transaminase [EC:2.6.1.112]
C 00199 Cytochrome P450 [BR:mke00199]
D OOT55_05115 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:mke00194]
D OOT55_13885 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D OOT55_13890 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D OOT55_13895 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D OOT55_13900 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D OOT55_13905 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D OOT55_13910 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D OOT55_13915 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D OOT55_13920 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D OOT55_13925 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:mke03000]
D OOT55_16475 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D OOT55_15330 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D OOT55_01255 ilvY; HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D OOT55_02200 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D OOT55_11230 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D OOT55_12830 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D OOT55_04820 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D OOT55_09395 LysR family transcriptional regulator K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D OOT55_00510 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D OOT55_03805 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D OOT55_13315 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D OOT55_15250 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D OOT55_15755 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D OOT55_08795 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D OOT55_09250 LacI family DNA-binding transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D OOT55_12955 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D OOT55_15430 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D OOT55_14015 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D OOT55_02870 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D OOT55_17325 merR; Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D OOT55_03775 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D OOT55_10155 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D OOT55_14595 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D OOT55_09320 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D OOT55_07790 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D OOT55_03410 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D OOT55_10955 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D OOT55_00970 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D OOT55_07945 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D OOT55_10675 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D OOT55_00675 birA; bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D OOT55_02035 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D OOT55_03930 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D OOT55_02755 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator
D OOT55_15650 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D OOT55_07380 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D OOT55_13930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D OOT55_04450 rfaH; transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH
D OOT55_10925 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase
D OOT55_12990 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D OOT55_13000 helix-turn-helix domain-containing protein K07733 alpA; prophage regulatory protein
D OOT55_17055 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein
D OOT55_11835 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D OOT55_08980 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D OOT55_00115 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D OOT55_08570 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:mke03021]
D OOT55_05045 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D OOT55_00910 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D OOT55_00750 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D OOT55_00755 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D OOT55_13260 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D OOT55_09525 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D OOT55_06770 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D OOT55_01010 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D OOT55_07440 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D OOT55_09945 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D OOT55_12915 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D OOT55_16895 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D OOT55_12710 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D OOT55_01840 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D OOT55_04090 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D OOT55_06345 rapA; RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D OOT55_09980 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D OOT55_00140 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D OOT55_00725 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D OOT55_01940 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D OOT55_01945 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D OOT55_13125 alpha/beta hydrolase K19707 rsbQ; sigma-B regulation protein RsbQ
D OOT55_08980 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D OOT55_00240 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D OOT55_06840 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D OOT55_14925 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:mke03019]
D OOT55_05500 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D OOT55_08335 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D OOT55_06980 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D OOT55_00030 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D OOT55_10255 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D OOT55_08385 rhlB; ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D OOT55_03945 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D OOT55_06335 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D OOT55_12845 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D OOT55_17405 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D OOT55_06815 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D OOT55_09955 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D OOT55_14925 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D OOT55_10140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D OOT55_01735 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10390 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10215 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D OOT55_15125 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D OOT55_09005 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D OOT55_11575 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D OOT55_03005 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D OOT55_01825 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D OOT55_02275 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:mke03011]
D OOT55_04225 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D OOT55_07320 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D OOT55_00815 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D OOT55_00905 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D OOT55_00870 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D OOT55_16735 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D OOT55_00765 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D OOT55_00855 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D OOT55_01925 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D OOT55_00780 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D OOT55_00900 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D OOT55_00760 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D OOT55_00895 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D OOT55_00850 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D OOT55_09960 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D OOT55_03700 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D OOT55_00830 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D OOT55_16740 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D OOT55_00805 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D OOT55_08785 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D OOT55_09510 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D OOT55_00735 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D OOT55_00800 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D OOT55_00785 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D OOT55_00790 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D OOT55_00845 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D OOT55_00860 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D OOT55_16750 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D OOT55_00740 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D OOT55_00730 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D OOT55_00745 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D OOT55_01920 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D OOT55_00835 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D OOT55_00880 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D OOT55_00820 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D OOT55_00915 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D OOT55_00865 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D OOT55_03715 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D OOT55_03580 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D OOT55_08875 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D OOT55_00810 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D OOT55_00795 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D OOT55_00840 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D OOT55_08870 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D OOT55_12930 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D OOT55_00825 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D OOT55_00875 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D OOT55_11445 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D OOT55_05475 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D OOT55_12925 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D OOT55_13985 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D OOT55_03575 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D OOT55_00890 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D OOT55_09125 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D OOT55_00635 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D OOT55_01270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D OOT55_00650 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D OOT55_01285 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D OOT55_00655 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D OOT55_01290 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:mke03009]
D OOT55_06980 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D OOT55_10255 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D OOT55_06975 era; GTPase Era K03595 era; GTPase
D OOT55_08865 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D OOT55_08980 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D OOT55_09980 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D OOT55_00140 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D OOT55_00725 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D OOT55_06260 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D OOT55_09415 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D OOT55_14100 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D OOT55_12735 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D OOT55_11775 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D OOT55_13945 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D OOT55_08565 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D OOT55_08585 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D OOT55_01685 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D OOT55_13810 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D OOT55_00035 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D OOT55_00250 rlmE; 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D OOT55_09590 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D OOT55_11700 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D OOT55_04670 rlmKL; bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D OOT55_07650 rlmM; 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D OOT55_03460 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D OOT55_06930 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D OOT55_04415 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D OOT55_06405 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D OOT55_06015 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D OOT55_05495 rluC; 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D OOT55_01200 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D OOT55_06635 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D OOT55_08680 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase / [ribosomal protein L31]-L-lysine N-acetyltransferase [EC:2.3.1.266 2.3.1.338]
D OOT55_09375 rimK; 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D OOT55_03705 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D OOT55_05255 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D OOT55_02050 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D OOT55_06195 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D OOT55_03145 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D OOT55_05500 rne; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D OOT55_08335 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D OOT55_11840 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D OOT55_05655 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D OOT55_06335 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D OOT55_10260 rsgA; small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D OOT55_03495 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D OOT55_03065 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D OOT55_10210 hflX; GTPase HflX K03665 hflX; GTPase
D OOT55_14125 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D OOT55_13265 spoT; bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D OOT55_09970 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D OOT55_09985 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D OOT55_09595 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D OOT55_07925 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D OOT55_00245 YhbY family RNA-binding protein K07574 yhbY; RNA-binding protein
D OOT55_01810 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D OOT55_04675 rmf; ribosome modulation factor K03812 rmf; ribosome modulation factor
D OOT55_01835 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D OOT55_09160 raiA; ribosome-associated translation inhibitor RaiA K05809 raiA; ribosome-associated inhibitor A
D OOT55_09150 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:mke03016]
D OOT55_09465 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D OOT55_02725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D OOT55_06730 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D OOT55_01125 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D OOT55_08890 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D OOT55_01475 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D OOT55_05435 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D OOT55_01330 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D OOT55_03795 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D OOT55_02410 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D OOT55_02995 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D OOT55_03565 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D OOT55_06565 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D OOT55_05430 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D OOT55_03020 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D OOT55_03480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D OOT55_03585 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D OOT55_03590 pheT; phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D OOT55_00630 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D OOT55_02925 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D OOT55_16075 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D OOT55_06330 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D OOT55_07915 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 CDK5RAP1; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D OOT55_12700 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D OOT55_11960 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D OOT55_06145 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D OOT55_09965 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D OOT55_06790 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D OOT55_03415 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D OOT55_14125 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D OOT55_10220 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D OOT55_13965 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D OOT55_13950 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D OOT55_10790 selD; selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D OOT55_08690 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D OOT55_13980 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D OOT55_08575 rnpB; RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D OOT55_07015 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D OOT55_12975 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D OOT55_02240 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D OOT55_16320 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D OOT55_13355 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D OOT55_13360 glyS; glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D OOT55_08985 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D OOT55_07125 tadA; tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D OOT55_02680 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D OOT55_02040 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D OOT55_01575 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D OOT55_05985 cmoA; carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D OOT55_05990 cmoB; tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D OOT55_05570 methyltransferase domain-containing protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D OOT55_04335 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D OOT55_03710 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D OOT55_03405 trmJ; tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D OOT55_07755 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D OOT55_04415 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D OOT55_06405 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D OOT55_03160 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D OOT55_06525 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D OOT55_07635 tusA; sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D OOT55_05525 tusB; sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D OOT55_05520 tusC; sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D OOT55_05515 tusD; sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D OOT55_05530 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D OOT55_07460 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D OOT55_05575 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D OOT55_07770 mnmC; bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D OOT55_03375 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D OOT55_01640 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D OOT55_01635 queE; 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D OOT55_07555 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D OOT55_10245 queG; tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D OOT55_16835 mnmH; tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D OOT55_03380 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D OOT55_15980 thiI; tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D OOT55_06830 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D OOT55_02895 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D OOT55_09505 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D OOT55_10235 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D OOT55_16785 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D OOT55_00030 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D OOT55_09955 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:mke03012]
D OOT55_07230 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1
D OOT55_09975 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D OOT55_03570 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D OOT55_15115 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D OOT55_07315 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D OOT55_00710 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D OOT55_00775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D OOT55_00770 fusA; elongation factor G K02355 fusA; elongation factor G
D OOT55_08175 fusA; elongation factor G K02355 fusA; elongation factor G
D OOT55_09090 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D OOT55_07305 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D OOT55_09085 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D OOT55_09130 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D OOT55_06610 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D OOT55_11095 efp; elongation factor P K02356 efp; elongation factor P
D OOT55_11090 epmA; EF-P lysine aminoacylase EpmA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D OOT55_11100 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D OOT55_07625 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D OOT55_03790 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D OOT55_08660 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D OOT55_07420 arfB; alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:mke03110]
D OOT55_06615 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D OOT55_01210 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D OOT55_05345 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D OOT55_11465 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D OOT55_06375 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D OOT55_10140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D OOT55_01735 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10390 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10135 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D OOT55_06390 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D OOT55_07825 djlA; co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein
D OOT55_15745 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D OOT55_10145 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D OOT55_09485 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D OOT55_03685 Hsp20 family protein K04080 ibpA; molecular chaperone IbpA
D OOT55_15740 S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D OOT55_01730 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D OOT55_10385 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D OOT55_07000 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D OOT55_00255 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D OOT55_13920 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D OOT55_11715 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D OOT55_13860 carbohydate-binding domain-containing protein K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D OOT55_06055 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D OOT55_04400 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D OOT55_15100 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D OOT55_01135 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D OOT55_01535 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D OOT55_10485 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D OOT55_15310 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D OOT55_09425 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D OOT55_14930 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D OOT55_13535 trxC; thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D OOT55_03800 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D OOT55_11720 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D OOT55_01785 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D OOT55_15085 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D OOT55_03725 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D OOT55_04915 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:mke04131]
D OOT55_03455 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D OOT55_02975 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D OOT55_02980 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D OOT55_06375 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:mke03051]
D OOT55_06375 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:mke03032]
D OOT55_05310 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D OOT55_16475 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D OOT55_05335 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D OOT55_03595 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D OOT55_06370 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D OOT55_13990 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D OOT55_16755 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D OOT55_09520 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D OOT55_00930 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D OOT55_07245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D OOT55_13995 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D OOT55_03225 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D OOT55_08900 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D OOT55_04420 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D OOT55_05305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_16410 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_02225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D OOT55_07250 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D OOT55_14610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D OOT55_04950 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D OOT55_01560 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D OOT55_04165 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D OOT55_14005 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D OOT55_11325 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D OOT55_11010 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D OOT55_05915 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:mke03036]
D OOT55_16475 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D OOT55_06980 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D OOT55_05045 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D OOT55_05335 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D OOT55_03595 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D OOT55_06370 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D OOT55_06390 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D OOT55_13990 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D OOT55_02270 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D OOT55_02035 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D OOT55_10215 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D OOT55_14015 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D OOT55_04940 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D OOT55_06025 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D OOT55_06020 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D OOT55_08505 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D OOT55_06810 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D OOT55_12725 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D OOT55_08555 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D OOT55_06590 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D OOT55_08560 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D OOT55_08530 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_12720 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D OOT55_08500 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D OOT55_14985 cell division protein ZapA K09888 zapA; cell division protein ZapA
D OOT55_14990 TIGR02449 family protein K09892 zapB; cell division protein ZapB
D OOT55_01915 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D OOT55_10230 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D OOT55_00445 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05020 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05230 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_13525 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_15215 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_12955 slmA; nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator
D OOT55_08355 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D OOT55_08350 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D OOT55_09580 rodA; rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_04125 ParA family protein K03496 parA; chromosome partitioning protein
D OOT55_13935 ParA family protein K03496 parA; chromosome partitioning protein
D OOT55_13930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D OOT55_11325 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D OOT55_11010 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D OOT55_13950 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D OOT55_13945 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D OOT55_13575 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D OOT55_03720 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D OOT55_01480 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D OOT55_14615 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:mke03400]
D OOT55_15325 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D OOT55_04840 phrB; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D OOT55_13785 DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D OOT55_02385 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D OOT55_15370 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D OOT55_07345 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D OOT55_05045 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D OOT55_08475 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D OOT55_16840 cryptochrome/photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D OOT55_15330 helix-turn-helix domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D OOT55_15300 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D OOT55_12780 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D OOT55_06695 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D OOT55_12970 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2]
D OOT55_03740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D OOT55_04950 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D OOT55_14610 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D OOT55_00920 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D OOT55_16500 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D OOT55_04740 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D OOT55_04760 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D OOT55_13780 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D OOT55_00750 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D OOT55_00755 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D OOT55_00910 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D OOT55_13260 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D OOT55_05865 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D OOT55_06760 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D OOT55_10225 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D OOT55_01365 sbcB; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D OOT55_03520 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D OOT55_10105 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D OOT55_07245 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D OOT55_13995 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D OOT55_03225 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D OOT55_08900 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D OOT55_04420 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D OOT55_05305 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_16410 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D OOT55_02225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D OOT55_00930 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D OOT55_16470 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D OOT55_06750 recA; recombinase RecA K03553 recA; recombination protein RecA
D OOT55_02425 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D OOT55_02430 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D OOT55_02420 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D OOT55_11450 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D OOT55_16265 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D OOT55_14000 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D OOT55_12825 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D OOT55_13030 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D OOT55_06970 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D OOT55_02235 recR; recombination mediator RecR K06187 recR; recombination protein RecR
D OOT55_10150 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D OOT55_09540 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D OOT55_06905 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1
D OOT55_04165 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D OOT55_14005 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D OOT55_05915 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D OOT55_05335 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D OOT55_02035 fis; DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D OOT55_03595 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D OOT55_06370 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D OOT55_12845 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D OOT55_17405 RecQ family ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D OOT55_08630 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D OOT55_05895 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D OOT55_05235 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D OOT55_06740 recombination regulator RecX K03565 recX; regulatory protein
D OOT55_14210 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D OOT55_01320 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D OOT55_08145 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D OOT55_10710 hypothetical protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D OOT55_08150 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:mke03029]
D OOT55_01935 cytochrome b N-terminal domain-containing protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D OOT55_09975 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D OOT55_03570 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D OOT55_07315 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D OOT55_00710 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D OOT55_00775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D OOT55_00770 fusA; elongation factor G K02355 fusA; elongation factor G
D OOT55_08175 fusA; elongation factor G K02355 fusA; elongation factor G
D OOT55_06975 era; GTPase Era K03595 era; GTPase
D OOT55_00630 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D OOT55_08890 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D OOT55_02410 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D OOT55_01330 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D OOT55_05665 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D OOT55_08365 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D OOT55_08370 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D OOT55_08360 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D OOT55_00930 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D OOT55_07280 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D OOT55_10140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D OOT55_10145 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D OOT55_01735 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10390 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_01730 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D OOT55_10385 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D OOT55_10135 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D OOT55_03415 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D OOT55_01785 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D OOT55_01480 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D OOT55_14520 cyoE; heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141]
D OOT55_14490 cytochrome c oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D OOT55_14515 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D OOT55_13970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D OOT55_06960 SCO family protein K07152 SCO1; protein SCO1
D OOT55_06375 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:mke02000]
D OOT55_11480 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D OOT55_13475 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D OOT55_12435 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D OOT55_07060 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D OOT55_04705 ABC transporter ATP-binding protein/permease K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D OOT55_04285 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D OOT55_05935 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D OOT55_14445 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D OOT55_14455 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D OOT55_14460 modC; molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D OOT55_13230 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D OOT55_13235 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein
D OOT55_13240 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D OOT55_15360 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D OOT55_15355 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D OOT55_01760 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D OOT55_14395 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D OOT55_11665 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D OOT55_10305 putative urea ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D OOT55_11610 putative urea ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D OOT55_10300 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D OOT55_10295 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D OOT55_15435 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D OOT55_15445 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D OOT55_15440 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D OOT55_15450 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D OOT55_00215 MlaD family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D OOT55_00225 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D OOT55_00220 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D OOT55_00210 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component
D OOT55_01875 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D OOT55_01955 phosphate ABC transporter substrate-binding protein PstS family protein K02040 pstS; phosphate transport system substrate-binding protein
D OOT55_14440 phosphate ABC transporter substrate-binding/OmpA family protein K02040 pstS; phosphate transport system substrate-binding protein
D OOT55_01960 ABC transporter permease subunit K02037 pstC; phosphate transport system permease protein
D OOT55_01965 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D OOT55_01970 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D OOT55_10470 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D OOT55_10480 ABC transporter permease K02042 phnE; phosphonate transport system permease protein
D OOT55_10475 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D OOT55_08440 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D OOT55_17455 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D OOT55_08435 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D OOT55_17450 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D OOT55_08430 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D OOT55_17445 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D OOT55_08425 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D OOT55_17440 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D OOT55_08420 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D OOT55_17435 urtE; urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein
D OOT55_12500 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D OOT55_12505 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein
D OOT55_12510 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D OOT55_12515 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D OOT55_03650 iron ABC transporter permease K25133 hmuU; heme transport system permease protein
D OOT55_03655 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D OOT55_03660 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D OOT55_14585 znuB; zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein
D OOT55_14590 znuC; zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D OOT55_10460 zinc ABC transporter substrate-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D OOT55_10455 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D OOT55_03235 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D OOT55_03240 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D OOT55_01845 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D OOT55_06450 ATP-binding cassette domain-containing protein K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D OOT55_14195 ABC transporter permease K25140 drrB; daunorubicin/doxorubicin transport system permease protein
D OOT55_14200 ATP-binding cassette domain-containing protein K25141 drrA; daunorubicin/doxorubicin transport system ATP-binding protein
D OOT55_05795 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D OOT55_05805 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein
D OOT55_15690 ABC transporter permease K09808 lolC_E_F; lipoprotein-releasing system permease protein
D OOT55_05800 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D OOT55_15695 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D OOT55_04895 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D OOT55_04890 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D OOT55_04885 ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D OOT55_12720 ftsX; permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D OOT55_12725 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D OOT55_07560 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D OOT55_12880 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D OOT55_07565 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D OOT55_12885 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D OOT55_13435 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D OOT55_08080 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D OOT55_14670 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D OOT55_17510 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D OOT55_17515 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D OOT55_03750 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D OOT55_08085 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D OOT55_13635 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D OOT55_14665 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D OOT55_17505 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D OOT55_03425 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D OOT55_13630 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D OOT55_16255 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D OOT55_03760 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D OOT55_08675 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D OOT55_13495 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D OOT55_14475 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D OOT55_16110 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D OOT55_00475 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, fucose-galactose-glucose:H+ symporter family protein
D OOT55_14530 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, fucose-galactose-glucose:H+ symporter family protein
D OOT55_15245 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D OOT55_00985 arsJ; organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D OOT55_10645 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D OOT55_15790 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D OOT55_01720 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D OOT55_13320 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D OOT55_11570 ptsP; phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D OOT55_01820 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D OOT55_01830 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D OOT55_14380 ion transporter K10716 kch; voltage-gated potassium channel
D OOT55_04990 ion transporter K08714 VGSC; voltage-gated sodium channel
D OOT55_06075 ammonium transporter K03320 amt; ammonium transporter, Amt family
D OOT55_14875 ammonium transporter K03320 amt; ammonium transporter, Amt family
D OOT55_14365 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D OOT55_01940 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D OOT55_05710 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D OOT55_05510 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D OOT55_01055 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D OOT55_01440 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D OOT55_05885 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D OOT55_04115 flagellar motor protein K02556 motA; chemotaxis protein MotA
D OOT55_10100 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D OOT55_04120 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D OOT55_10095 MotB family protein K02557 motB; chemotaxis protein MotB
D OOT55_07005 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D OOT55_05775 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D OOT55_11540 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D OOT55_11545 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D OOT55_15520 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D OOT55_15525 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D OOT55_05770 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D OOT55_08625 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D OOT55_09880 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D OOT55_11535 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D OOT55_15530 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D OOT55_02440 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D OOT55_02445 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D OOT55_01795 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D OOT55_05135 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D OOT55_06570 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D OOT55_17330 merT; mercuric ion transporter MerT K08363 merT; mercuric ion transport protein
D OOT55_17335 merP; mercury resistance system periplasmic binding protein MerP K08364 merP; periplasmic mercuric ion binding protein
D OOT55_05420 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D OOT55_11080 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D OOT55_02310 porin K07221 oprO_P; phosphate-selective porin OprO and OprP
D OOT55_01075 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D OOT55_15210 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D OOT55_01095 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D OOT55_05095 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D OOT55_12250 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D OOT55_17295 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D OOT55_17345 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D OOT55_17275 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system
D OOT55_11045 TolC family outer membrane protein K12340 tolC; outer membrane protein
D OOT55_00435 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D OOT55_04290 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D OOT55_14745 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D OOT55_07280 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D OOT55_03490 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D OOT55_01195 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D OOT55_01855 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D OOT55_00525 MipA/OmpV family protein K07274 mipA; MipA family protein
D OOT55_13770 MipA/OmpV family protein K07274 mipA; MipA family protein
D OOT55_15805 MipA/OmpV family protein K07274 mipA; MipA family protein
D OOT55_07930 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D OOT55_12450 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D OOT55_12230 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D OOT55_17365 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D OOT55_01080 efflux RND transporter permease subunit K15726 czcA; heavy metal efflux system protein
D OOT55_05085 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D OOT55_12240 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D OOT55_17305 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D OOT55_17355 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein
D OOT55_12370 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D OOT55_17285 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein
D OOT55_00440 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_03040 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_05015 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_05225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_13520 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_15220 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_12180 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D OOT55_08805 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D OOT55_10840 BCCT family transporter K05020 opuD; glycine betaine transporter
D OOT55_17215 BCCT family transporter K05020 opuD; glycine betaine transporter
D OOT55_04805 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D OOT55_14385 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D OOT55_16275 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D OOT55_00185 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D OOT55_01870 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D OOT55_09630 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D OOT55_02115 cation acetate symporter K14393 actP; cation/acetate symporter
D OOT55_02850 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D OOT55_14090 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D OOT55_14095 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D OOT55_00595 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D OOT55_10520 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D OOT55_07155 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D OOT55_15665 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family
D OOT55_02815 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D OOT55_13775 dctP; TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein
D OOT55_15915 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein
D OOT55_02820 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D OOT55_13745 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein
D OOT55_15920 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein
D OOT55_02825 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D OOT55_13750 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein
D OOT55_15925 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein
D OOT55_17370 arsenic resistance protein K03325 ACR3; arsenite transporter
D OOT55_08755 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D OOT55_08760 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D OOT55_08765 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D OOT55_08770 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D OOT55_08775 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D OOT55_08780 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G
D OOT55_01110 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D OOT55_01980 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D OOT55_03500 AEC family transporter K24180 mleP; malate permease and related proteins
D OOT55_08140 AEC family transporter K24180 mleP; malate permease and related proteins
D OOT55_09275 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D OOT55_07195 AI-2E family transporter K03548 perM; putative permease
D OOT55_08530 ftsW; putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28]
D OOT55_12190 manganese efflux pump MntP family protein K23242 mntP; manganese efflux pump family protein
D OOT55_09875 energy transducer TonB K03832 tonB; periplasmic protein TonB
D OOT55_11830 energy transducer TonB K03832 tonB; periplasmic protein TonB
D OOT55_00570 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D OOT55_02460 pal; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D OOT55_02455 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D OOT55_01590 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D OOT55_01585 oadA; sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D OOT55_11950 protein-disulfide reductase DsbD family protein K08344 scsB; suppressor for copper-sensitivity B
D OOT55_10505 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_10500 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_10490 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D OOT55_08115 DmsE family decaheme c-type cytochrome K28380 mtrA_D; multiheme cytochrome MtrA/D
D OOT55_08110 MtrB/PioB family decaheme-associated outer membrane protein K28381 mtrB_E; extracellular iron oxide respiratory system outer membrane component MtrB/E
D OOT55_01085 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D OOT55_05090 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D OOT55_12245 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D OOT55_17300 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D OOT55_17350 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system
D OOT55_12365 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D OOT55_17280 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D OOT55_12440 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D OOT55_00445 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05020 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05230 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_13525 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_15215 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_04280 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D OOT55_09195 RagB/SusD family nutrient uptake outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D OOT55_08605 BON domain-containing protein K28369 dolP; outer membrane lipoprotein DolP
D OOT55_01030 pnuC; nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D OOT55_04910 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D OOT55_15475 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D OOT55_14035 DUF202 domain-containing protein K00389 yidH; inner membrane protein YidH
C 02044 Secretion system [BR:mke02044]
D OOT55_13475 peptidase domain-containing ABC transporter K11004 hlyB; ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
D OOT55_11045 TolC family outer membrane protein K12340 tolC; outer membrane protein
D OOT55_12440 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D OOT55_12435 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D OOT55_07960 AAA family ATPase K02450 gspA; general secretion pathway protein A
D OOT55_07965 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B
D OOT55_12695 gspC; type II secretion system protein GspC K02452 gspC; general secretion pathway protein C
D OOT55_12690 gspD; type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D
D OOT55_11495 type II/IV secretion system protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D OOT55_12685 gspE; type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D OOT55_12680 gspF; type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F
D OOT55_12675 gspG; type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G
D OOT55_12670 gspH; type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H
D OOT55_12665 gspI; type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I
D OOT55_12660 gspJ; type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J
D OOT55_12655 gspK; type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K
D OOT55_12650 gspL; type II secretion system protein GspL K02461 gspL; general secretion pathway protein L
D OOT55_12645 type II secretion system protein M K02462 gspM; general secretion pathway protein M
D OOT55_12640 type II secretion system protein N K02463 gspN; general secretion pathway protein N
D OOT55_08745 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D OOT55_08730 pilin K02650 pilA; type IV pilus assembly protein PilA
D OOT55_08735 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D OOT55_08740 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D OOT55_01175 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D OOT55_03465 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D OOT55_11820 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D OOT55_11815 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D OOT55_11810 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D OOT55_11805 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D OOT55_11800 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK
D OOT55_11430 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D OOT55_11425 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D OOT55_11420 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D OOT55_11415 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D OOT55_11410 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D OOT55_11850 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D OOT55_11845 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D OOT55_01155 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D OOT55_01160 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D OOT55_01165 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D OOT55_01170 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D OOT55_04430 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D OOT55_05300 pilus assembly protein K27041 fimL; scaffold protein FimL
D OOT55_01145 GspH/FimT family protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D OOT55_01150 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D OOT55_06150 hypothetical protein K08086 fimV; pilus assembly protein FimV
D OOT55_07700 type II secretion system GspH family protein K10924 mshA; MSHA pilin protein MshA
D OOT55_07705 hypothetical protein K10925 mshB; MSHA pilin protein MshB
D OOT55_07690 type II secretion system GspH family protein K10926 mshC; MSHA pilin protein MshC
D OOT55_07685 prepilin-type N-terminal cleavage/methylation domain-containing protein K10927 mshD; MSHA pilin protein MshD
D OOT55_07715 GspE/PulE family protein K12276 mshE; MSHA biogenesis protein MshE
D OOT55_07710 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG
D OOT55_07745 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D OOT55_07750 pilus assembly protein PilM K12279 mshI; MSHA biogenesis protein MshI
D OOT55_07740 type II secretion system protein M K12280 mshJ; MSHA biogenesis protein MshJ
D OOT55_07735 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK
D OOT55_07730 mshL; pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D OOT55_07725 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM
D OOT55_07680 type II secretion system protein K12285 mshO; MSHA biogenesis protein MshO
D OOT55_07675 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP
D OOT55_07670 PA14 domain-containing protein K12287 mshQ; MSHA biogenesis protein MshQ
D OOT55_11865 YggT family protein K02221 yggT; YggT family protein
D OOT55_04195 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D OOT55_05780 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D OOT55_04075 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D OOT55_04070 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D OOT55_04875 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein
D OOT55_03990 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D OOT55_04000 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D OOT55_04005 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D OOT55_04045 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D OOT55_04050 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D OOT55_04055 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D OOT55_04060 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D OOT55_04065 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D OOT55_03725 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D OOT55_16635 tssM; type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL
D OOT55_16630 icmH; type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK
D OOT55_16625 tssK; type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ
D OOT55_16580 tssG; type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH
D OOT55_16585 tssF; type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG
D OOT55_16590 tssE; type VI secretion system baseplate subunit TssE K11897 impF; type VI secretion system protein ImpF
D OOT55_16600 tssC; type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC
D OOT55_16605 tssB; type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB
D OOT55_16610 tssA; type VI secretion system protein TssA K11902 impA; type VI secretion system protein ImpA
D OOT55_16680 type VI secretion system tube protein Hcp K11903 hcp; type VI secretion system secreted protein Hcp
D OOT55_16685 tssI; type VI secretion system tip protein TssI/VgrG K11904 vgrG; type VI secretion system secreted protein VgrG
D OOT55_16620 tssJ; type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD
D OOT55_16575 tssH; type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG
D OOT55_16640 tagF; type VI secretion system-associated protein TagF K11890 impM; type VI secretion system protein ImpM
D OOT55_16595 tssC; type VI secretion system contractile sheath large subunit K11899 impD; type VI secretion system protein ImpD
D OOT55_16615 tagH; type VI secretion system-associated FHA domain protein TagH K11913 fha1; type VI secretion system protein
D OOT55_08485 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D OOT55_11715 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D OOT55_03385 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D OOT55_05150 secD; protein translocase subunit SecD K12257 secDF; SecD/SecF fusion protein
D OOT55_00720 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D OOT55_03390 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D OOT55_00275 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D OOT55_00885 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D OOT55_05410 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D OOT55_12730 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D OOT55_05540 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D OOT55_13970 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D OOT55_11255 tatA; twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA
D OOT55_11265 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:mke02042]
D OOT55_05420 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D OOT55_11080 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D OOT55_09855 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:mke02022]
D OOT55_12785 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D OOT55_12790 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D OOT55_09620 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D OOT55_09615 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D OOT55_00520 winged helix-turn-helix domain-containing protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D OOT55_06000 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D OOT55_12390 ATP-binding protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D OOT55_12395 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D OOT55_16925 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D OOT55_17115 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D OOT55_16930 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D OOT55_17120 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D OOT55_12225 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D OOT55_12220 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB
D OOT55_10655 narL; two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D OOT55_04750 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D OOT55_13660 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D OOT55_13665 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR
D OOT55_15965 glnL; nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D OOT55_15960 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D OOT55_09000 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG
D OOT55_01185 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D OOT55_01180 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D OOT55_16830 sigma 54-interacting transcriptional regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D OOT55_14865 prsR; PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator
D OOT55_04105 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D OOT55_04095 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D OOT55_04110 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D OOT55_05945 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_06485 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_13330 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_11795 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D OOT55_11820 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D OOT55_11815 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D OOT55_11790 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D OOT55_03955 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D OOT55_03960 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D OOT55_08665 response regulator K15012 regA; two-component system, response regulator RegA
D OOT55_04025 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB
D OOT55_04020 SpoIIE family protein phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
C 02035 Bacterial motility proteins [BR:mke02035]
D OOT55_04105 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D OOT55_04130 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D OOT55_04135 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D OOT55_06480 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D OOT55_04110 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D OOT55_04095 cheY; chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D OOT55_04100 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D OOT55_05945 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_06485 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_13330 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D OOT55_01000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_09790 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_12385 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_14955 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D OOT55_06535 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D OOT55_04000 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D OOT55_04005 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D OOT55_04010 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D OOT55_04050 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D OOT55_04055 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D OOT55_04060 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D OOT55_04065 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D OOT55_04075 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D OOT55_04070 flhB; flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D OOT55_03995 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D OOT55_04040 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D OOT55_04045 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D OOT55_03990 fliF; flagellar basal-body MS-ring/collar protein FliF K02409 fliF; flagellar M-ring protein FliF
D OOT55_03860 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D OOT55_06490 flgA; flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D OOT55_03855 flgH; flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D OOT55_04035 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D OOT55_15080 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D OOT55_03985 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D OOT55_04030 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D OOT55_03825 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D OOT55_03830 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D OOT55_03835 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D OOT55_03845 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D OOT55_03850 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D OOT55_03865 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D OOT55_03840 flagellar hook-basal body complex protein K02390 flgE; flagellar hook protein FlgE
D OOT55_03870 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D OOT55_03875 flgL; flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D OOT55_06500 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D OOT55_07005 OmpA family protein K21218 motY; sodium-type flagellar protein MotY
D OOT55_03905 flagellin K02406 fliC; flagellin
D OOT55_03915 fliD; flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2
D OOT55_03920 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D OOT55_03880 flagellar protein FliT K02423 fliT; flagellar protein FliT
D OOT55_03925 hypothetical protein K02423 fliT; flagellar protein FliT
D OOT55_04090 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D OOT55_04115 flagellar motor protein K02556 motA; chemotaxis protein MotA
D OOT55_10100 pomA; flagellar motor protein PomA K02556 motA; chemotaxis protein MotA
D OOT55_04120 motD; flagellar motor protein MotD K02557 motB; chemotaxis protein MotB
D OOT55_10095 MotB family protein K02557 motB; chemotaxis protein MotB
D OOT55_03930 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D OOT55_03955 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D OOT55_03960 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC
D OOT55_06495 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D OOT55_03910 flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D OOT55_04080 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D OOT55_04085 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG
D OOT55_11820 pilG; twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG
D OOT55_11815 pilH; twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH
D OOT55_11810 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI
D OOT55_11805 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ
D OOT55_11800 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK
D OOT55_11795 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D OOT55_01180 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D OOT55_01185 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D OOT55_11850 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D OOT55_11845 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D OOT55_11790 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase)
D OOT55_11785 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC
D OOT55_08730 pilin K02650 pilA; type IV pilus assembly protein PilA
D OOT55_08735 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D OOT55_08740 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D OOT55_08745 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D OOT55_03465 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D OOT55_11410 type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D OOT55_11415 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D OOT55_11420 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D OOT55_11425 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D OOT55_11430 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D OOT55_04430 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ
D OOT55_01155 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D OOT55_01160 PilW family protein K02672 pilW; type IV pilus assembly protein PilW
D OOT55_01165 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D OOT55_01170 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1
D OOT55_01175 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:mke04812]
D OOT55_08355 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D OOT55_08500 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D OOT55_08505 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D OOT55_04125 ParA family protein K03496 parA; chromosome partitioning protein
D OOT55_13935 ParA family protein K03496 parA; chromosome partitioning protein
D OOT55_13930 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:mke04147]
D OOT55_06375 htpG; molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D OOT55_06815 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D OOT55_02975 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D OOT55_12125 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D OOT55_02980 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D OOT55_06055 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D OOT55_02370 peroxiredoxin C K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D OOT55_01735 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10390 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D OOT55_10140 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D OOT55_02945 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D OOT55_03525 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D OOT55_00710 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D OOT55_00775 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D OOT55_06330 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D OOT55_06465 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
D OOT55_05160 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D OOT55_12145 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D OOT55_02885 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D OOT55_13655 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D OOT55_01375 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D OOT55_10755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D OOT55_00325 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D OOT55_13295 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D OOT55_05190 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D OOT55_17520 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D OOT55_15975 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D OOT55_04965 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D OOT55_01340 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D OOT55_03820 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D OOT55_11965 serA; phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D OOT55_02030 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D OOT55_06650 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_17710 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D OOT55_02960 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D OOT55_00270 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D OOT55_02520 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:mke02048]
D OOT55_06905 cas1f; type I-F CRISPR-associated endonuclease Cas1f K15342 cas1; CRISP-associated protein Cas1
D OOT55_06900 cas3f; type I-F CRISPR-associated helicase Cas3f K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D OOT55_06890 csy2; type I-F CRISPR-associated protein Csy2 K19128 csy2; CRISPR-associated protein Csy2
D OOT55_06885 csy3; type I-F CRISPR-associated protein Csy3 K19129 csy3; CRISPR-associated protein Csy3
D OOT55_06880 cas6f; type I-F CRISPR-associated endoribonuclease Cas6/Csy4 K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D OOT55_16475 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D OOT55_17040 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D OOT55_17045 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D OOT55_10640 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D OOT55_17615 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4
D OOT55_17610 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4
D OOT55_17660 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1
D OOT55_10625 type II toxin-antitoxin system VapC family toxin K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-]
D OOT55_10630 hypothetical protein K28280 vapB22; antitoxin VapB22
D OOT55_08500 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D OOT55_08355 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D OOT55_11325 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D OOT55_11010 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D OOT55_02725 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D OOT55_07455 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D OOT55_04695 DUF86 domain-containing protein K28186 hepT; HepT family RNase toxin
D OOT55_04690 nucleotidyltransferase domain-containing protein K28187 mntA; MntA family adenylyltransferase antitoxin
D OOT55_03415 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:mke01504]
D OOT55_14350 AAC(3)-I family aminoglycoside N-acetyltransferase K03395 aac3-I; aminoglycoside 3-N-acetyltransferase I [EC:2.3.1.60]
D OOT55_10670 M56 family metallopeptidase K02172 blaR1; bla regulator protein blaR1
D OOT55_10675 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D OOT55_16925 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D OOT55_17115 heavy metal sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D OOT55_16930 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D OOT55_17120 heavy metal response regulator transcription factor K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D OOT55_09620 ATP-binding protein K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D OOT55_09615 response regulator transcription factor K07660 phoP; two-component system, OmpR family, response regulator PhoP
D OOT55_00445 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_03035 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05020 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_05230 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_13525 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_15215 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D OOT55_00440 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_03040 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_05015 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_05225 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_13520 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_15220 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D OOT55_00435 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D OOT55_04290 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D OOT55_03775 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D OOT55_11045 TolC family outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:mke03100]
D OOT55_00645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D OOT55_01280 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D OOT55_02730 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D OOT55_06245 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D OOT55_06505 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D OOT55_07535 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D OOT55_14720 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D OOT55_06290 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D OOT55_04355 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D OOT55_04920 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D OOT55_04775 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D OOT55_09115 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D OOT55_07580 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D OOT55_07590 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D OOT55_00700 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D OOT55_07575 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D OOT55_07585 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D OOT55_06250 tRNA-His K14226 tRNA-His; tRNA His
D OOT55_00640 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D OOT55_01275 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D OOT55_00025 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_00280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_03370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_04770 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_05360 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D OOT55_01645 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D OOT55_01650 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D OOT55_00455 tRNA-Ile K14230 tRNA-Met; tRNA Met
D OOT55_09155 tRNA-Met K14230 tRNA-Met; tRNA Met
D OOT55_09990 tRNA-Met K14230 tRNA-Met; tRNA Met
D OOT55_15395 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D OOT55_03605 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D OOT55_06240 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D OOT55_09060 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D OOT55_03010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D OOT55_05505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D OOT55_07540 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D OOT55_00690 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D OOT55_00705 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D OOT55_13955 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D OOT55_00715 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D OOT55_00695 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D OOT55_04350 tRNA-Val K14237 tRNA-Val; tRNA Val
D OOT55_04680 tRNA-Val K14237 tRNA-Val; tRNA Val
D OOT55_04925 tRNA-Val K14237 tRNA-Val; tRNA Val
D OOT55_00635 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D OOT55_01270 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D OOT55_00650 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D OOT55_01285 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D OOT55_00655 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D OOT55_01290 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D OOT55_08575 rnpB; RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component
D OOT55_17425 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
D OOT55_02220 ffs; signal recognition particle sRNA small type K01983 ffs; signal recognition particle 4.5S RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D OOT55_15875 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D OOT55_02495 dkgB; 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D OOT55_02480 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D OOT55_08005 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D OOT55_13610 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D OOT55_14060 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D OOT55_15155 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D OOT55_16060 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D OOT55_00980 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D OOT55_10415 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D OOT55_10590 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D OOT55_10615 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D OOT55_10620 molybdopterin-dependent oxidoreductase K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D OOT55_04810 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D OOT55_02775 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D OOT55_04720 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D OOT55_12275 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D OOT55_05280 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D OOT55_11210 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D OOT55_07600 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D OOT55_08325 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D OOT55_02690 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D OOT55_10905 yghU; glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D OOT55_03030 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D OOT55_05550 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D OOT55_02210 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D OOT55_10880 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D OOT55_12280 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D OOT55_04715 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D OOT55_12110 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D OOT55_16440 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D OOT55_12170 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D OOT55_17340 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D OOT55_08030 copper oxidase K22348 moxA; manganese oxidase [EC:1.16.3.3]
D OOT55_10745 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D OOT55_06785 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D OOT55_04860 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D OOT55_11290 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D OOT55_07935 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D OOT55_00360 acetate--CoA ligase family protein K09181 patZ; [protein]-L-lysine N-acetyltransferase [EC:2.3.1.338]
D OOT55_07780 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D OOT55_06600 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D OOT55_06080 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D OOT55_06605 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D OOT55_15770 glycosidase K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D OOT55_08810 alpha-amylase family glycosyl hydrolase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D OOT55_05730 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D OOT55_11565 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D OOT55_05830 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D OOT55_11490 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D OOT55_00300 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D OOT55_00465 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D OOT55_05640 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D OOT55_09285 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D OOT55_13375 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D OOT55_07830 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D OOT55_14010 sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D OOT55_12810 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D OOT55_06035 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D OOT55_06220 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D OOT55_04435 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D OOT55_16245 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D OOT55_16780 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D OOT55_12470 glycoside hydrolase family 13 protein K21575 susA; neopullulanase [EC:3.2.1.135]
D OOT55_09930 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D OOT55_02590 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D OOT55_09295 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D OOT55_15995 glycoside hydrolase family 88 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D OOT55_13145 D-aminoacylase K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D OOT55_14110 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D OOT55_15425 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D OOT55_05485 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D OOT55_05695 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D OOT55_06095 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D OOT55_15895 altronate dehydratase family protein K26399 K26399; arabinonate dehydratase [EC:4.2.1.5]
D OOT55_10240 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D OOT55_02560 rhamnogalacturonan lyase K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D OOT55_16425 sugar phosphate isomerase/epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D OOT55_02595 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D OOT55_07525 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D OOT55_11215 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D OOT55_01455 rsxD; electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D OOT55_01460 rsxC; electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D OOT55_01465 rsxB; electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D OOT55_05860 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D OOT55_05855 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D OOT55_05850 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D OOT55_05845 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D OOT55_05840 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D OOT55_05835 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D OOT55_01410 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D OOT55_08975 sfsA; DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A
D OOT55_02535 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D OOT55_02530 LutB/LldF family L-lactate oxidation iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D OOT55_14155 dihydroxy-acid dehydratase K22216 ilvD1; dehydratase ilvD1
D OOT55_13605 gluconate 2-dehydrogenase subunit 3 family protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
D OOT55_15160 gluconate 2-dehydrogenase subunit 3 family protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D OOT55_06765 ferredoxin family protein K05524 fdxA; ferredoxin
D OOT55_01450 rsxG; electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D OOT55_01445 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D OOT55_01470 rsxA; electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D OOT55_07765 fldB; flavodoxin FldB K03840 fldB; flavodoxin II
D OOT55_13185 napE; periplasmic nitrate reductase, NapE protein K02571 napE; periplasmic nitrate reductase NapE
D OOT55_05995 flavodoxin K03839 fldA; flavodoxin I
D OOT55_08130 NapC/NirT family cytochrome c K02569 napC; NapC/NirT family cytochrome c
D OOT55_13205 cytochrome c3 family protein K02569 napC; NapC/NirT family cytochrome c
C 99983 Lipid metabolism
D OOT55_03025 acyl-CoA dehydrogenase family protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D OOT55_11855 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D OOT55_06360 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D OOT55_13690 tetratricopeptide repeat protein K02498 hemY; HemY protein
D OOT55_16085 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D OOT55_14190 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D OOT55_02215 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D OOT55_12115 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D OOT55_10540 DoxX family protein K15977 K15977; putative oxidoreductase
D OOT55_02475 alpha/beta hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D OOT55_05875 cold shock domain-containing protein K03704 cspA; cold shock protein
D OOT55_07785 cold shock domain-containing protein K03704 cspA; cold shock protein
D OOT55_10845 cold-shock protein K03704 cspA; cold shock protein
D OOT55_15025 cold-shock protein K03704 cspA; cold shock protein
D OOT55_15405 cold-shock protein K03704 cspA; cold shock protein
D OOT55_15090 rsd; sigma D regulator K07740 rsd; regulator of sigma D
D OOT55_14880 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D OOT55_13445 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D OOT55_04475 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
D OOT55_07995 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D OOT55_06620 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D OOT55_05355 tig; trigger factor K03545 tig; trigger factor
D OOT55_10180 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D OOT55_14175 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D OOT55_07900 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein
D OOT55_07840 peptidase K07395 K07395; putative proteasome-type protease
D OOT55_09315 OsmC family protein K07397 yhfA; putative redox protein
D OOT55_04275 nfuA; Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D OOT55_10430 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D OOT55_12530 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D OOT55_12935 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D OOT55_17375 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D OOT55_04325 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D OOT55_08595 YraN family protein K07460 yraN; putative endonuclease
D OOT55_05725 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D OOT55_14120 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D OOT55_06575 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D OOT55_12995 DUF927 domain-containing protein K06919 K06919; putative DNA primase/helicase
D OOT55_03895 IS110 family transposase K07486 K07486; transposase
D OOT55_03950 IS110 family transposase K07486 K07486; transposase
D OOT55_04425 IS110 family transposase K07486 K07486; transposase
D OOT55_10665 IS110 family transposase K07486 K07486; transposase
D OOT55_12270 IS110 family transposase K07486 K07486; transposase
D OOT55_12715 IS110 family transposase K07486 K07486; transposase
D OOT55_16260 IS110 family transposase K07486 K07486; transposase
D OOT55_03015 transposase K07491 rayT; REP-associated tyrosine transposase
D OOT55_04480 transposase K07491 rayT; REP-associated tyrosine transposase
D OOT55_12300 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D OOT55_02230 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
D OOT55_13790 DASH family cryptochrome K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D OOT55_00060 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D OOT55_11505 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D OOT55_06945 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D OOT55_13135 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D OOT55_13290 sodium/sugar symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D OOT55_14165 sodium/sugar symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D OOT55_10175 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D OOT55_17705 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D OOT55_05535 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D OOT55_10940 ytfE; iron-sulfur cluster repair protein YtfE K07322 ytfE; regulator of cell morphogenesis and NO signaling
D OOT55_09655 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D OOT55_11735 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D OOT55_05930 universal stress protein K06149 uspA; universal stress protein A
D OOT55_07025 universal stress protein K14055 uspE; universal stress protein E
D OOT55_15990 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D OOT55_01595 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D OOT55_07920 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D OOT55_09645 PrkA family serine protein kinase K07180 prkA; serine protein kinase
D OOT55_01715 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D OOT55_06580 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D OOT55_02330 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D OOT55_06775 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D OOT55_08075 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D OOT55_13650 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D OOT55_04905 ccmE; cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D OOT55_04930 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH
C 99994 Others
D OOT55_01975 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D OOT55_02365 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D OOT55_09410 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D OOT55_16940 copper resistance protein B K07233 pcoB; copper resistance protein B
B
B 09194 Poorly characterized
C 99996 General function prediction only
D OOT55_06110 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D OOT55_14650 group 1 truncated hemoglobin K06886 glbN; hemoglobin
D OOT55_06460 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D OOT55_00615 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D OOT55_03440 iron-sulfur cluster assembly accessory protein K05997 sufA; Fe-S cluster assembly protein SufA
D OOT55_03420 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D OOT55_13815 metal-dependent hydrolase K07038 K07038; inner membrane protein
D OOT55_02770 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D OOT55_07475 YihY family inner membrane protein K07058 K07058; membrane protein
D OOT55_03450 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D OOT55_07375 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D OOT55_03155 hflD; high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein
D OOT55_00975 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D OOT55_00350 LemA family protein K03744 lemA; LemA protein
D OOT55_08610 LemA family protein K03744 lemA; LemA protein
D OOT55_07215 SlyX family protein K03745 slyX; SlyX protein
D OOT55_15595 lytic polysaccharide monooxygenase K03933 cpbD; chitin-binding protein
D OOT55_06780 DUF368 domain-containing protein K08974 K08974; putative membrane protein
D OOT55_05130 YchJ family metal-binding protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D OOT55_04995 ATP-binding protein K06923 K06923; uncharacterized protein
D OOT55_05580 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D OOT55_04850 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein
D OOT55_09370 M14 family metallopeptidase K06987 K06987; uncharacterized protein
D OOT55_09725 VOC family protein K06996 K06996; uncharacterized protein
D OOT55_11015 esterase YqiA K07000 K07000; uncharacterized protein
D OOT55_00430 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein
D OOT55_01910 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D OOT55_06795 hypothetical protein K07019 K07019; uncharacterized protein
D OOT55_07655 alpha/beta hydrolase K07020 K07020; uncharacterized protein
D OOT55_07515 TatD family hydrolase K07051 K07051; uncharacterized protein
D OOT55_14250 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein
D OOT55_03680 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein
D OOT55_09235 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D OOT55_16000 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D OOT55_01040 PhoX family phosphatase K07093 K07093; uncharacterized protein
D OOT55_02635 DUF418 domain-containing protein K07148 K07148; uncharacterized protein
D OOT55_13975 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D OOT55_09515 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D OOT55_09560 DUF493 domain-containing protein K09158 K09158; uncharacterized protein
D OOT55_02250 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein
D OOT55_04855 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D OOT55_13500 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D OOT55_06045 YciI family protein K09780 K09780; uncharacterized protein
D OOT55_09650 YeaH/YhbH family protein K09786 K09786; uncharacterized protein
D OOT55_02990 Trm112 family protein K09791 K09791; uncharacterized protein
D OOT55_01420 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D OOT55_10165 RnfH family protein K09801 K09801; uncharacterized protein
D OOT55_05825 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D OOT55_11240 DUF2309 domain-containing protein K09822 K09822; uncharacterized protein
D OOT55_13730 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D OOT55_08470 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D OOT55_14995 UPF0149 family protein K09895 K09895; uncharacterized protein
D OOT55_07660 YheU family protein K09898 K09898; uncharacterized protein
D OOT55_02245 YcgL domain-containing protein K09902 K09902; uncharacterized protein
D OOT55_15230 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein
D OOT55_04385 YeaC family protein K09916 K09916; uncharacterized protein
D OOT55_01065 YebG family protein K09918 K09918; uncharacterized protein
D OOT55_13705 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D OOT55_11025 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein
D OOT55_13580 DUF484 family protein K09921 K09921; uncharacterized protein
D OOT55_16160 DMT family protein K09922 K09922; uncharacterized protein
D OOT55_05790 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D OOT55_11690 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D OOT55_10195 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein
D OOT55_16515 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein
D OOT55_17700 DUF3820 family protein K09954 K09954; uncharacterized protein
D OOT55_00075 glycoside hydrolase family 127 protein K09955 K09955; uncharacterized protein
D OOT55_11500 TIGR00153 family protein K07220 K07220; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: August 9, 2026