+F Repair protein KO #

  DNA Repair and Recombination Proteins - Mycobacterium leprae TN

% ! AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D ML1151 ogt; probable methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] C BER (base exicision repair) D DNA glycosylases E ML1675 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E ML1351 possible 3-methylpurine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E ML1920 mutY; probable DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E ML2301 nth; putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex E ML2157 probable DNA helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D ML1028 dut; probable deoxyuridine triphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D ML1151 ogt; probable methylated-DNA-protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] C BER (base exicision repair) D DNA glycosylases E ML1675 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] E ML1105 conserved hypothetical protein. K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E ML1351 possible 3-methylpurine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E ML1920 mutY; probable DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E ML1066 tagA; DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] E ML1658 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E ML2301 nth; putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E ML1889 putataive endonuclease IV (apurinase) K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D RecJ D DNA ligase E ML1705 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I E ML1381 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] C NER (nucleotide excision repair) D GGR (global genome repair) factors E ML1392 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E ML1387 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E ML0562 uvrC; putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E ML0153 uvrD; putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E ML0637 uvrD2; putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E ML1381 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] E ML1705 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F ML1891 rpoB; [beta] subunit of RNA polymerase K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F ML1890 rpoC; [beta]' subunit of RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F ML1957 rpoA; [alpha] subunit of RNA polymerase K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F ML0542 conserved hypothetical protein K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F ML0252 mfd; putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors D Molecular matchmaker D Strand discrimination factor D DNA exonucleases E ML1940 xseA; exonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] E ML1941 xseB; exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D DNA polymerase III holoenzyme E ML1207 dnaE; DNA polymerase III, [alpha] subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E ML0002 dnaN; putative DNA polymerase III, [beta] subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E ML0603 putative lipoprotein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E ML0202 conserved hypothetical protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E ML2335 dnaZX; DNA polymerase III, subunit [gamma/tau] K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E ML1705 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E ML0153 uvrD; putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E ML0637 uvrD2; putative ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E ML2684 ssb; single strand binding protein K03111 ssb; single-strand DNA-binding protein B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E ML0987 recA; RecA protein K03553 recA; recombination protein RecA E ML0482 ruvA; Holliday junction DNA helicase component K03550 ruvA; holliday junction DNA helicase RuvA E ML0483 ruvB; Holliday junction helicase component K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E ML0481 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E ML0548 priA; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D RecFOR pathway proteins E ML0987 recA; RecA protein K03553 recA; recombination protein RecA E ML0003 recF; putative DNA replication and SOS induction protein K03629 recF; DNA replication and repair protein RecF E ML1671 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E ML0633 conserved hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) E ML2329 recR; DNA repair protein K06187 recR; recombination protein RecR E ML1360 recN; recombination and DNA repair K03631 recN; DNA repair protein RecN (Recombination protein N) E ML0482 ruvA; Holliday junction DNA helicase component K03550 ruvA; holliday junction DNA helicase RuvA E ML0483 ruvB; Holliday junction helicase component K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E ML0481 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F ML0006 gyrA; putative DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F ML0005 gyrB; putative DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F ML0200 topA; putative DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F ML1683 probable histone-like protein K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F ML0633 conserved hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) F ML2329 recR; DNA repair protein K06187 recR; recombination protein RecR F ML1705 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F ML1392 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F ML1387 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors D ML0987 recA; RecA protein K03553 recA; recombination protein RecA D ML1003 lexA; LexA, SOS repressor protein K01356 lexA; repressor LexA [EC:3.4.21.88] D ML1360 recN; recombination and DNA repair K03631 recN; DNA repair protein RecN (Recombination protein N) D ML2684 ssb; single strand binding protein K03111 ssb; single-strand DNA-binding protein D ML0988 recX; putative regulatory protein RecX K03565 recX; regulatory protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases C Modulation of nucleotide pools D ML1682 conserved hypothetical protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D ML1028 dut; probable deoxyuridine triphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D ML1734 nrdE; ribonucleoside diphosphate reductase [alpha] chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D ML1731 nrdF; ribonucleotide reductase small subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: August 19, 2024