+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Myotis lucifugus (little brown bat)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 102430069 RNMT; mRNA cap guanine-N7 methyltransferase isoform X1 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 102432858 RNGTT; mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 102425903 CDK7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 102436523 CMTR1; LOW QUALITY PROTEIN: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 102416806 UBAC2; LOW QUALITY PROTEIN: ubiquitin-associated domain-containing protein 2 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 102420549 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 102423472 FAM103A1; RNMT-activating mini protein K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 102438225 NCBP1; nuclear cap-binding protein subunit 1 isoform X1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 102435590 NCBP2; nuclear cap-binding protein subunit 2 K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 102437679 NUDT21; cleavage and polyadenylation specificity factor subunit 5 isoform X1 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 102431336 cleavage and polyadenylation specificity factor subunit 6-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 102430601 CPSF7; cleavage and polyadenylation specificity factor subunit 7 isoform X2 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 102427423 LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6-like K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 102427341 CLP1; polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 102431088 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 102425405 LOW QUALITY PROTEIN: pre-mRNA cleavage complex 2 protein Pcf11-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 102417293 pre-mRNA cleavage complex 2 protein Pcf11-like K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 102437655 CPSF2; cleavage and polyadenylation specificity factor subunit 2 isoform X1 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 102424456 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 102423222 CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X8 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 102421783 CPSF4L; putative cleavage and polyadenylation specificity factor subunit 4-like protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 102418891 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 isoform X1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 102440955 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 102428038 WDR82; LOW QUALITY PROTEIN: WD repeat-containing protein 82 K14962 WDR82; COMPASS component SWD2
E 102437203 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102436383 serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102429857 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit isoform X2 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102417633 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 102431667 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 102421096 CSTF1; LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 102429958 cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 102432793 cleavage stimulation factor subunit 2 tau variant-like isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 102426460 CSTF2; cleavage stimulation factor subunit 2 K14407 CSTF2; cleavage stimulation factor subunit 2
E 102420052 CSTF3; cleavage stimulation factor subunit 3 isoform X1 K14408 CSTF3; cleavage stimulation factor subunit 3
E 102432837 SYMPK; LOW QUALITY PROTEIN: symplekin K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 102426828 SNRPB; LOW QUALITY PROTEIN: small nuclear ribonucleoprotein-associated proteins B and B' K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 102434490 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 102421692 SNRPE; small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 102417543 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 102424738 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 102437528 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 102436332 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 102434604 small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 102425252 small nuclear ribonucleoprotein F-like K11098 SNRPF; small nuclear ribonucleoprotein F
E 102436062 SNRPG; small nuclear ribonucleoprotein G isoform X1 K11099 SNRPG; small nuclear ribonucleoprotein G
E 102428392 LSM10; U7 snRNA-associated Sm-like protein LSm10 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 102433148 LSM11; LOW QUALITY PROTEIN: U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 102437655 CPSF2; cleavage and polyadenylation specificity factor subunit 2 isoform X1 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 102424456 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 102429958 cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 102432793 cleavage stimulation factor subunit 2 tau variant-like isoform X1 K14407 CSTF2; cleavage stimulation factor subunit 2
E 102426460 CSTF2; cleavage stimulation factor subunit 2 K14407 CSTF2; cleavage stimulation factor subunit 2
E 102432837 SYMPK; LOW QUALITY PROTEIN: symplekin K06100 SYMPK; symplekin
E 102428057 histone RNA hairpin-binding protein K18710 SLBP; histone RNA hairpin-binding protein
E 102429103 CASP8AP2; LOW QUALITY PROTEIN: CASP8-associated protein 2 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 102433990 SUPT4H1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 102418455 transcription elongation factor SPT4-A-like K15171 SUPT4H1; transcription elongation factor SPT4
E 102419087 transcription elongation factor SPT4-A-like K15171 SUPT4H1; transcription elongation factor SPT4
E 102421998 transcription elongation factor SPT4-A-like K15171 SUPT4H1; transcription elongation factor SPT4
E 102426419 SUPT5H; transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 102431558 METTL3; N6-adenosine-methyltransferase catalytic subunit K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 102436842 METTL14; N6-adenosine-methyltransferase non-catalytic subunit K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 102440690 METTL4; methyltransferase-like protein 4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 102432877 METTL16; U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 102422641 WTAP; pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 102422149 VIRMA; protein virilizer homolog isoform X1 K22910 VIRMA; protein virilizer
E 102432803 RBM15B; LOW QUALITY PROTEIN: putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 102427140 RBM15; putative RNA-binding protein 15 isoform X2 K13190 RBM15; RNA-binding protein 15
E 102428120 ZC3H13; zinc finger CCCH domain-containing protein 13 isoform X6 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 111825286 CBLL2; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ZNF645 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
E 102436220 CBLL1; E3 ubiquitin-protein ligase Hakai isoform X1 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 102436103 PAPOLG; poly(A) polymerase gamma isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102422211 PAPOLA; poly(A) polymerase alpha isoform X6 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102434065 PAPOLB; poly(A) polymerase beta K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102434182 LOW QUALITY PROTEIN: poly(A) polymerase type 3-like K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 102424751 PAPD4; poly(A) RNA polymerase GLD2 isoform X2 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 102440782 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 102417021 BARD1; BRCA1-associated RING domain protein 1 isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 102432182 RBM26; RNA-binding protein 26 isoform X9 K13192 RBM26; RNA-binding protein 26
E 102420185 FTO; alpha-ketoglutarate-dependent dioxygenase FTO isoform X1 K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 102439186 ALKBH5; RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 102433414 TARDBP; TAR DNA-binding protein 43 isoform X1 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 102431065 DHX40; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX40 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 102440276 KIN; DNA/RNA-binding protein KIN17 isoform X1 K13102 KIN; DNA/RNA-binding protein KIN17
D 102432893 METTL8; methyltransferase-like protein 8 isoform X2 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 102435331 METTL22; methyltransferase-like protein 22 isoform X1 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 102436482 FAM46B; putative nucleotidyltransferase FAM46B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 102424329 FAM46C; putative nucleotidyltransferase FAM46C K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 102420180 FAM46D; putative nucleotidyltransferase FAM46D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 102429376 ZC3H14; zinc finger CCCH domain-containing protein 14 isoform X6 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 102417534 SRRT; serrate RNA effector molecule homolog isoform X3 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 102432654 RBM8A; RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A
E 102423545 MAGOHB; protein mago nashi homolog 2 isoform X1 K12877 MAGOH; protein mago nashi
E 102433548 MAGOH; protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 102425243 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 102431253 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 102420415 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 102438883 DDX39B; spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 102427012 eukaryotic initiation factor 4A-III-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102418823 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-III-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102426346 CCDC174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 102420908 CASC3; protein CASC3 isoform X2 K14323 CASC3; protein CASC3
E 102439717 SAP18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 102440002 PNN; pinin isoform X1 K13114 PNN; pinin
E 102420583 ACIN1; apoptotic chromatin condensation inducer in the nucleus isoform X1 K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 102437280 LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1-like K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 102427065 RNPS1; RNA-binding protein with serine-rich domain 1 isoform X1 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 102422240 SRRM1; LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 102417947 THOC1; THO complex subunit 1 isoform X1 K12878 THOC1; THO complex subunit 1
E 102438351 THOC2; THO complex subunit 2 isoform X4 K12879 THOC2; THO complex subunit 2
E 106695265 LOW QUALITY PROTEIN: THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 102431450 LOW QUALITY PROTEIN: THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 102417902 LOW QUALITY PROTEIN: THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 102421560 LOW QUALITY PROTEIN: THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 111826256 THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 102417927 LOW QUALITY PROTEIN: THO complex subunit 2-like K12879 THOC2; THO complex subunit 2
E 102428620 THOC3; THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 102425243 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 102431253 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 102420415 THO complex subunit 4-like K12881 THOC4; THO complex subunit 4
E 102437380 LOW QUALITY PROTEIN: THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 102421005 THOC5; THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
E 102434615 THOC6; THO complex subunit 6 homolog isoform X5 K13175 THOC6; THO complex subunit 6
E 102430825 THOC7; THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 102429137 PCID2; PCI domain-containing protein 2 isoform X2 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 102421233 SEM1; LOW QUALITY PROTEIN: 26S proteasome complex subunit SEM1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 102435702 ENY2; transcription and mRNA export factor ENY2 isoform X2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 102435201 transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 102434290 centrin-2-like K10840 CETN2; centrin-2
E 102429479 CETN2; centrin-2 K10840 CETN2; centrin-2
E 102441927 centrin-2-like K10840 CETN2; centrin-2
E 102426454 centrin-2 K10840 CETN2; centrin-2
E 102435365 CETN3; centrin-3 K16466 CETN3; centrin-3
E 102417016 LOW QUALITY PROTEIN: germinal-center associated nuclear protein-like K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
E 102417353 MCM3AP; germinal-center associated nuclear protein isoform X1 K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 102423081 TPR; nucleoprotein TPR K09291 TPR; nucleoprotein TPR
E 102423200 RAE1; mRNA export factor isoform X1 K14298 RAE1; mRNA export factor
E 102440448 SEC13; protein SEC13 homolog isoform X1 K14004 SEC13; protein transport protein SEC13
E 102425820 NUP37; nucleoporin Nup37 isoform X1 K14302 NUP37; nuclear pore complex protein Nup37
E 102418414 NUP85; nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 102437494 NUP43; LOW QUALITY PROTEIN: nucleoporin Nup43 K14305 NUP43; nuclear pore complex protein Nup43
E 102435289 NUP50; LOW QUALITY PROTEIN: nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 102427697 NUP54; nucleoporin p54 K14308 NUP54; nuclear pore complex protein Nup54
E 102425117 NUP62; nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62
E 102435024 LOW QUALITY PROTEIN: nuclear pore glycoprotein p62-like K14306 NUP62; nuclear pore complex protein Nup62
E 102437949 NUP88; nuclear pore complex protein Nup88 isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 102440052 NUP93; nuclear pore complex protein Nup93 isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 102420881 NUP98; nuclear pore complex protein Nup98-Nup96 isoform X2 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 102442592 NUP107; nuclear pore complex protein Nup107 isoform X1 K14301 NUP107; nuclear pore complex protein Nup107
E 102422539 NUP133; nuclear pore complex protein Nup133 isoform X1 K14300 NUP133; nuclear pore complex protein Nup133
E 102431322 NUP188; nucleoporin NUP188 homolog isoform X1 K14311 NUP188; nuclear pore complex protein Nup188
E 102433366 NUP153; nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 102431055 NUP155; LOW QUALITY PROTEIN: nuclear pore complex protein Nup155 K14312 NUP155; nuclear pore complex protein Nup155
E 102442369 NUP160; nuclear pore complex protein Nup160 K14303 NUP160; nuclear pore complex protein Nup160
E 102424558 NUP35; nucleoporin NUP53 isoform X2 K14313 NUP35; nuclear pore complex protein Nup53
E 102433654 NUP205; nuclear pore complex protein Nup205 isoform X1 K14310 NUP205; nuclear pore complex protein Nup205
E 102439615 NUP210; LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein 210 K14314 NUP210; nuclear pore complex protein Nup210
E 102439029 NUP210L; nuclear pore membrane glycoprotein 210-like K14314 NUP210; nuclear pore complex protein Nup210
E 102434367 NUP214; LOW QUALITY PROTEIN: nuclear pore complex protein Nup214 K14317 NUP214; nuclear pore complex protein Nup214
E 102436649 nuclear envelope pore membrane protein POM 121C isoform X3 K14316 POM121; nuclear pore complex protein Nup121
E 102419576 POM121L2; POM121-like protein 2 K14316 POM121; nuclear pore complex protein Nup121
E 102422288 NUP58; nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 102429995 NUPL2; nucleoporin-like protein 2 isoform X2 K14321 NUPL2; nucleoporin-like protein 2
E 102434376 NDC1; nucleoporin NDC1 isoform X1 K14315 NDC1; nucleoporin NDC1
E 102432721 SEH1L; nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1
E 102437255 E3 SUMO-protein ligase RanBP2 isoform X1 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 102417666 SENP2; LOW QUALITY PROTEIN: sentrin-specific protease 2 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 102419315 AAAS; aladin K14320 AAAS; aladin
E 102435365 CETN3; centrin-3 K16466 CETN3; centrin-3
E 102424352 GLE1; nucleoporin GLE1 isoform X1 K18723 GLE1; nucleoporin GLE1
E 102441576 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 102442203 LOW QUALITY PROTEIN: nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 102442521 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
E 102422124 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 102422421 NXF3; nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
E 102432813 NXF1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 102417766 NXT2; NTF2-related export protein 2 isoform X2 K14285 NXT1_2; NTF2-related export protein 1/2
E 102428197 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
D Ran-mediated transport factors
E 102434289 TMEM41B; LOW QUALITY PROTEIN: transmembrane protein 41B K07936 RAN; GTP-binding nuclear protein Ran
E 102429685 ANP32A; acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X1 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 102417427 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X1 K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 102425311 TNFSF13; tumor necrosis factor ligand superfamily member 13 isoform X2 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 102427069 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 102436700 ELAVL2; ELAV-like protein 2 isoform X11 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 102420955 ELAVL4; ELAV-like protein 4 isoform X2 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 102440567 ELAVL3; ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 102441457 FAF2; FAS-associated factor 2 isoform X1 K18726 FAF2; FAS-associated factor 2
E 102419328 VCP; transitional endoplasmic reticulum ATPase isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase
E 102438037 VCPKMT; protein-lysine methyltransferase METTL21D isoform X1 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 102443270 TNPO2; transportin-2 isoform X1 K18727 TNPO2; transportin-2
E 102433726 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1
E 102427078 XPO7; exportin-7 K18460 XPO7; exportin-7
E 102437932 RANBP17; ran-binding protein 17 K24115 RANBP17; Ran-binding protein 17
E 102430139 RANGAP1; ran GTPase-activating protein 1 isoform X1 K14319 RANGAP1; Ran GTPase-activating protein 1
E 102438859 TAF15; TATA-binding protein-associated factor 2N isoform X1 K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 102437938 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 102433516 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 102416807 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 102431191 EIF4E; eukaryotic translation initiation factor 4E isoform X1 K03259 EIF4E; translation initiation factor 4E
E 102429869 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 102440720 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 102426569 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 102418622 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 102433664 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 102435344 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 102439562 EIF4B; eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B
E 102431454 EIF4H; eukaryotic translation initiation factor 4H isoform X2 K24086 EIF4H; translation initiation factor 4H
E 102418433 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1 K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 102442911 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 102433579 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4E-binding protein 2-like K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 102428563 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 102442120 EIF4ENIF1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 102442849 ANGEL1; protein angel homolog 1 isoform X1 K18729 ANGEL; protein angel
E 102429191 ANGEL2; protein angel homolog 2 isoform X2 K18729 ANGEL; protein angel
E 102426044 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X6 K15516 FMR; fragile X mental retardation protein
E 102442543 FMR1; synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 102428447 FXR2; fragile X mental retardation syndrome-related protein 2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 102443283 LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102433766 CYFIP2; cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102417280 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 102427738 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 102426574 CPEB1; cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102425692 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102429803 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102422012 CPEB2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102427440 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102420168 GIGYF1; GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102435270 GIGYF2; GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102442503 PABPC4L; polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 102432686 LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 102437146 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 102439041 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 102430523 PABPC1L; polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 102423026 PABPC1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 102442121 LOW QUALITY PROTEIN: uncharacterized protein LOC102442121 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 102438533 PAIP1; polyadenylate-binding protein-interacting protein 1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 102436952 PAIP2; polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 102423964 PAIP2B; polyadenylate-binding protein-interacting protein 2B K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 102434698 SKIV2L; helicase SKI2W isoform X2 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 102440896 DEAF1; deformed epidermal autoregulatory factor 1 homolog K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 102439690 MCTS1; malignant T-cell-amplified sequence 1 isoform X1 K07575 MCTS; malignant T-cell-amplified sequence
E 102421655 malignant T-cell-amplified sequence 1-like K07575 MCTS; malignant T-cell-amplified sequence
E 102428850 DENR; density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 102440453 APOBEC1; C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 102425616 A1CF; APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 102441846 PYM1; partner of Y14 and mago isoform X2 K14294 WIBG; partner of Y14 and mago
E 102441060 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102434839 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102441418 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102426522 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102441399 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102441427 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102425626 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102428193 MSI2; RNA-binding protein Musashi homolog 2 isoform X3 K14411 MSI; RNA-binding protein Musashi
E 102436794 MSI1; LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 1 K14411 MSI; RNA-binding protein Musashi
E 102421018 DAZAP1; DAZ-associated protein 1 isoform X3 K14411 MSI; RNA-binding protein Musashi
E 102419666 HBS1L; HBS1-like protein isoform X2 K14416 HBS1; elongation factor 1 alpha-like protein
E 102438775 PELO; protein pelota homolog K06965 PELO; protein pelota
E 102417323 polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 102435044 PABPN1L; LOW QUALITY PROTEIN: embryonic polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 102429149 polyadenylate-binding protein 2-like K14396 PABPN1; polyadenylate-binding protein 2
E 102423090 DDX19A; ATP-dependent RNA helicase DDX19A isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 102423591 ATP-dependent RNA helicase DDX19B isoform X1 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 102423687 ATP-dependent RNA helicase DDX25-like K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 102417331 DDX25; ATP-dependent RNA helicase DDX25 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 102423676 pre-mRNA-splicing factor SYF1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 102442467 LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1-like K12867 SYF1; pre-mRNA-splicing factor SYF1
E 102416881 SARNP; SAP domain-containing ribonucleoprotein isoform X1 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 102423609 RCC1; regulator of chromosome condensation isoform X4 K11493 RCC1; regulator of chromosome condensation
E 102421455 LARP6; la-related protein 6 isoform X1 K18733 LARP6; la-related protein 6
E 102417365 PURA; LOW QUALITY PROTEIN: transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
E 102427220 POLDIP3; polymerase delta-interacting protein 3 K22414 POLDIP3; polymerase delta-interacting protein 3
E 102420570 ZC3H11A; zinc finger CCCH domain-containing protein 11A K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 102437288 LENG8; leukocyte receptor cluster member 8 isoform X1 K23802 LENG8; SAC3 family protein LENG8/THP3
E 102426510 PATL2; protein PAT1 homolog 2 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 102439508 ETF1; eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 102418167 GSPT1; LOW QUALITY PROTEIN: eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 102439147 GSPT2; eukaryotic peptide chain release factor GTP-binding subunit ERF3B K03267 ERF3; peptide chain release factor subunit 3
E 102423624 UPF1; regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 102420686 UPF2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 102419029 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 102434968 UPF3A; regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 102432188 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102430803 PPP2CB; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform isoform X1 K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 102421388 PPP2R1B; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 102442817 PPP2R1A; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 102431175 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102423271 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102440385 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform-like K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102437363 PPP2R2B; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102422214 PPP2R2D; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 102433629 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 102428034 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 102433480 PPP2R5E; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102417642 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102432946 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102430062 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X5 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 102442935 PPP2R5B; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 102431928 SMG1; serine/threonine-protein kinase SMG1 isoform X3 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 102439570 SMG5; protein SMG5 isoform X1 K11125 SMG5; protein SMG5
E 102434319 SMG6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 102442980 SMG7; protein SMG7 isoform X2 K14409 SMG7; protein SMG7
E 102437725 SMG8; protein SMG8 K18734 SMG8; protein SMG8
E 102419034 SMG9; protein SMG9 isoform X3 K18735 SMG9; protein SMG9
E 102420168 GIGYF1; GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102435270 GIGYF2; GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 102434250 SECISBP2; selenocysteine insertion sequence-binding protein 2 isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 102429777 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 102423770 DHX34; probable ATP-dependent RNA helicase DHX34 isoform X1 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 102440584 GTPBP1; GTP-binding protein 1 isoform X3 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 102417104 PUM3; pumilio homolog 3 isoform X1 K14844 PUF6; pumilio homology domain family member 6
E 102427399 MYO5B; unconventional myosin-Vb K10357 MYO5; myosin V
E 102419574 MYO5A; LOW QUALITY PROTEIN: unconventional myosin-Va K10357 MYO5; myosin V
E 102419889 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 102418122 BICD1; protein bicaudal D homolog 1 K18739 BICD; protein bicaudal D
E 102438152 BICD2; protein bicaudal D homolog 2 K18739 BICD; protein bicaudal D
E 102439984 EXD1; piRNA biogenesis protein EXD1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 102425233 actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 102433374 actin, cytoplasmic 1-like K05692 ACTB_G1; actin beta/gamma 1
E 102443101 MBP; myelin basic protein isoform X1 K17269 MBP; myelin basic protein
E 102440401 VIM; vimentin K07606 VIM; vimentin
E 102436231 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 102436540 metallothionein-2A K14739 MT1_2; metallothionein 1/2
E 102426511 MYC; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 102423922 GDF1; embryonic growth/differentiation factor 1 K05495 GDF1; growth differentiation factor 1
E 102437956 TBX6; T-box transcription factor TBX6 isoform X1 K10180 TBX6; T-box protein 6
D Trans-acting binding proteins
E 102433379 ZBP1; Z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 102431972 FUBP1; LOW QUALITY PROTEIN: far upstream element-binding protein 1 K13210 FUBP; far upstream element-binding protein
E 102421210 KHSRP; far upstream element-binding protein 2 isoform X1 K13210 FUBP; far upstream element-binding protein
E 102434894 FUBP3; far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
E 102441795 EEF1A2; LOW QUALITY PROTEIN: elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 102418763 putative elongation factor 1-alpha-like 3 K03231 EEF1A; elongation factor 1-alpha
E 102419194 EEF1A1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 102438591 EEF1G; LOW QUALITY PROTEIN: elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 102421258 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 102430786 heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 102420393 heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 102435038 HAX1; HCLS1-associated protein X-1 K16220 HAX1; HCLS1-associated protein X-1
E 102420597 AGFG1; arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 102423413 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 102435500 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 102438194 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 102431626 PTBP1; polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 102426574 CPEB1; cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102425692 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102429803 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102422012 CPEB2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 102426044 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X6 K15516 FMR; fragile X mental retardation protein
E 102442543 FMR1; synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 102428447 FXR2; fragile X mental retardation syndrome-related protein 2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 102443283 LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102433766 CYFIP2; cytoplasmic FMR1-interacting protein 2 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 102421098 PCBP2; poly(rC)-binding protein 2 isoform X19 K13162 PCBP2; poly(rC)-binding protein 2
E 102428102 PCBP3; poly(rC)-binding protein 3 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 102421913 CAPRIN1; caprin-1 K18743 CAPRIN1; caprin-1
E 102437366 CAPRIN2; caprin-2 K18744 CAPRIN2; caprin-2
E 102418539 YBX1; nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 102438952 nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 102442722 nuclease-sensitive element-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 102418732 XRN1; 5'-3' exoribonuclease 1 isoform X2 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 102433594 protein argonaute-3 isoform X2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102434206 protein argonaute-1 isoform X2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102433952 AGO2; protein argonaute-2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102437202 AGO4; protein argonaute-4 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 102437938 eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 102433516 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 102416807 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 102431191 EIF4E; eukaryotic translation initiation factor 4E isoform X1 K03259 EIF4E; translation initiation factor 4E
E 102423624 UPF1; regulator of nonsense transcripts 1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 102427440 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 102425531 DDX6; probable ATP-dependent RNA helicase DDX6 isoform X1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 102426143 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 102434315 MEX3A; RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 102419137 MEX3D; LOW QUALITY PROTEIN: RNA-binding protein MEX3D K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 102432778 FASTK; fas-activated serine/threonine kinase isoform X3 K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 102441443 LSM14A; protein LSM14 homolog A isoform X1 K18749 LSM14; protein LSM14
E 102428687 LOW QUALITY PROTEIN: protein LSM14 homolog A-like K18749 LSM14; protein LSM14
E 102417622 protein LSM14 homolog A-like K18749 LSM14; protein LSM14
E 102417155 LSM14B; protein LSM14 homolog B isoform X2 K18749 LSM14; protein LSM14
E 102439252 PCBP1; poly(rC)-binding protein 1 K12889 PCBP1; poly(rC)-binding protein 1
E 102421098 PCBP2; poly(rC)-binding protein 2 isoform X19 K13162 PCBP2; poly(rC)-binding protein 2
E 102418539 YBX1; nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 102438952 nuclease-sensitive element-binding protein 1 K09276 YBX1; Y-box-binding protein 1
E 102442722 nuclease-sensitive element-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 102438650 LIMD1; LIM domain-containing protein 1 isoform X1 K16682 AJUBA; LIM domain-containing protein
E 102423816 AJUBA; LOW QUALITY PROTEIN: LIM domain-containing protein ajuba K16682 AJUBA; LIM domain-containing protein
E 102440453 APOBEC1; C->U-editing enzyme APOBEC-1 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 111824110 DNA dC->dU-editing enzyme APOBEC-3G-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 111824111 DNA dC->dU-editing enzyme APOBEC-3G-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 102435310 DNA dC->dU-editing enzyme APOBEC-3G-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 102439233 DNA dC->dU-editing enzyme APOBEC-3G-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 106695187 DNA dC->dU-editing enzyme APOBEC-3G-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 106695188 DNA dC->dU-editing enzyme APOBEC-3A-like isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 102435613 DNA dC->dU-editing enzyme APOBEC-3C K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 102434062 DNA dC->dU-editing enzyme APOBEC-3G-like isoform X3 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 106695661 DNA dC->dU-editing enzyme APOBEC-3A-like isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 102417833 MOV10; putative helicase MOV-10 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 102422390 PNRC2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 102423716 TNPO1; transportin-1 K18752 TNPO1; transportin-1
E 102431928 SMG1; serine/threonine-protein kinase SMG1 isoform X3 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 102439570 SMG5; protein SMG5 isoform X1 K11125 SMG5; protein SMG5
E 102434319 SMG6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 102442980 SMG7; protein SMG7 isoform X2 K14409 SMG7; protein SMG7
E 102439475 ZFP36L2; mRNA decay activator protein ZFP36L2 K18753 ZFP36L; butyrate response factor
E 102417401 ZFP36L1; mRNA decay activator protein ZFP36L1 K18753 ZFP36L; butyrate response factor
E 102426443 LIN28A; protein lin-28 homolog A K18754 LIN28; protein lin-28
E 102432249 LIN28B; LOW QUALITY PROTEIN: protein lin-28 homolog B K18754 LIN28; protein lin-28
E 102421627 HTT; LOW QUALITY PROTEIN: huntingtin K04533 HD; huntingtin
E 102421855 IPO8; LOW QUALITY PROTEIN: importin-8 K18755 IPO8; importin-8
E 102436107 BICC1; protein bicaudal C homolog 1 K18756 BICC1; protein bicaudal C
E 102441060 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102434839 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102441418 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102426522 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102441399 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102441427 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102425626 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 102437773 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 102417960 PRKACA; LOW QUALITY PROTEIN: cAMP-dependent protein kinase catalytic subunit alpha K04345 PKA; protein kinase A [EC:2.7.11.11]
E 102438556 LARP1B; la-related protein 1B isoform X4 K18757 LARP1; la-related protein 1
E 102419692 LARP1; la-related protein 1 isoform X1 K18757 LARP1; la-related protein 1
E 102418595 ATXN2; LOW QUALITY PROTEIN: ataxin-2 K23625 ATXN2_2L; ataxin 2/2L
E 102433841 ATXN2L; ataxin-2-like protein isoform X8 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 102436917 DCP2; m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 102420664 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 102435235 DCP1B; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102420947 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 102426142 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 102424665 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 102432463 LSM4; U6 snRNA-associated Sm-like protein LSm4 isoform X3 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 102431458 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 102435470 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 102430992 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 102418596 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 102442234 KLC1; kinesin light chain 1 isoform X9 K10407 KLC; kinesin light chain
E 102422278 KLC3; LOW QUALITY PROTEIN: kinesin light chain 3 K10407 KLC; kinesin light chain
E 102434015 KLC2; kinesin light chain 2 K10407 KLC; kinesin light chain
E 102418806 KLC4; kinesin light chain 4 K10407 KLC; kinesin light chain
E 102427399 MYO5B; unconventional myosin-Vb K10357 MYO5; myosin V
E 102419574 MYO5A; LOW QUALITY PROTEIN: unconventional myosin-Va K10357 MYO5; myosin V
E 102419889 MYO5C; unconventional myosin-Vc K10357 MYO5; myosin V
E 102431002 TUBA4A; tubulin alpha-4A chain K07374 TUBA; tubulin alpha
E 102431314 tubulin alpha-1D chain K07374 TUBA; tubulin alpha
E 102438700 tubulin alpha-1B chain-like K07374 TUBA; tubulin alpha
E 102439244 LOW QUALITY PROTEIN: tubulin alpha-1C chain K07374 TUBA; tubulin alpha
E 102432058 tubulin alpha-1C chain-like K07374 TUBA; tubulin alpha
E 102425627 TUBA8; tubulin alpha-8 chain isoform X1 K07374 TUBA; tubulin alpha
E 102420434 TUBAL3; tubulin alpha chain-like 3 K07374 TUBA; tubulin alpha
E 102424990 tubulin alpha-1C chain-like K07374 TUBA; tubulin alpha
E 102430141 tubulin alpha-1A chain-like K07374 TUBA; tubulin alpha
E 102422314 tubulin alpha-3 chain-like K07374 TUBA; tubulin alpha
E 102420899 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 102437803 tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 102438109 TUBA1B; tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 102426574 CPEB1; cytoplasmic polyadenylation element-binding protein 1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102425692 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102429803 CPEB3; cytoplasmic polyadenylation element-binding protein 3 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102422012 CPEB2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 102417280 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 102427738 TACC3; transforming acidic coiled-coil-containing protein 3 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 102442943 TNRC6A; trinucleotide repeat-containing gene 6A protein isoform X1 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 102438501 TNRC6C; trinucleotide repeat-containing gene 6C protein isoform X4 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 102435048 TNRC6B; trinucleotide repeat-containing gene 6B protein isoform X3 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 102423616 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X5 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 102438739 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102434481 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 102433418 CNOT6L; CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102420708 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102429428 CNOT7; CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102418657 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102440524 uncharacterized protein KIAA0355 homolog K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 102431316 DIS3L2; LOW QUALITY PROTEIN: DIS3-like exonuclease 2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 102431799 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 102417003 PAN3; PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 102418692 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 102423136 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 102430971 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 102428510 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 102435763 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 102423538 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 102442120 EIF4ENIF1; LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4E transporter K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 102438634 PATL1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 102436033 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 102420898 EDC4; enhancer of mRNA-decapping protein 4 isoform X4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 102423776 NANOS2; LOW QUALITY PROTEIN: nanos homolog 2 K18760 NANOS2; protein nanos 2
E 102440223 NANOS3; nanos homolog 3 K18761 NANOS3; protein nanos 3
E 102420686 UPF2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 102419029 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 102434968 UPF3A; regulator of nonsense transcripts 3A K14328 UPF3; regulator of nonsense transcripts 3
E 102423903 TRIM21; E3 ubiquitin-protein ligase TRIM21 K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 102441498 TRIM71; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 102433747 POLR2G; DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 102418614 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 102425514 ZAR1L; ZAR1-like protein isoform X1 K18762 ZAR1; zygote arrest protein 1
E 102427839 YTHDF1; YTH domain-containing family protein 1 isoform X2 K20102 YTHDF; YTH domain-containing family protein
E 102421297 YTHDF2; YTH domain-containing family protein 2 isoform X2 K20102 YTHDF; YTH domain-containing family protein
E 102423990 YTHDF3; YTH domain-containing family protein 3 isoform X6 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 102428412 TIAL1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 102436990 TIA1; nucleolysin TIA-1 isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 102442503 PABPC4L; polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 102432686 LOW QUALITY PROTEIN: polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 102437146 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 102439041 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 102430523 PABPC1L; polyadenylate-binding protein 1-like isoform X1 K13126 PABPC; polyadenylate-binding protein
E 102423026 PABPC1; polyadenylate-binding protein 1 K13126 PABPC; polyadenylate-binding protein
E 102423413 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 102435500 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 102426044 FXR1; fragile X mental retardation syndrome-related protein 1 isoform X6 K15516 FMR; fragile X mental retardation protein
E 102442543 FMR1; synaptic functional regulator FMR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 102428447 FXR2; fragile X mental retardation syndrome-related protein 2 isoform X1 K15516 FMR; fragile X mental retardation protein
E 102433379 ZBP1; Z-DNA-binding protein 1 K12965 ZBP1; Z-DNA binding protein 1
E 102427069 ELAVL1; ELAV-like protein 1 K13088 ELAVL1; ELAV-like protein 1
E 102423772 G3BP1; ras GTPase-activating protein-binding protein 1 isoform X2 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 102422043 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 102427424 EIF2A; eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 102428467 EIF3B; eukaryotic translation initiation factor 3 subunit B K03253 EIF3B; translation initiation factor 3 subunit B
E 102429869 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 102440720 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 102426569 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 102427012 eukaryotic initiation factor 4A-III-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102418823 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-III-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 102439562 EIF4B; eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B
E 102418622 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 K03260 EIF4G; translation initiation factor 4G
E 102433664 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 102435344 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 102438050 RPS6KA6; ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 102441142 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X2 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 102432403 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 102442324 LOW QUALITY PROTEIN: receptor of activated protein C kinase 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 102441576 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 102442203 LOW QUALITY PROTEIN: nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 102442521 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
E 102422124 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 102422421 NXF3; nuclear RNA export factor 3 K14284 NXF; nuclear RNA export factor
E 102432813 NXF1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor
E 102426310 HDAC6; histone deacetylase 6 isoform X1 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 102434817 TDRD3; tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3
E 102423765 LARP4B; la-related protein 4B isoform X1 K18763 LARP4; la-related protein 4
E 102423390 LARP4; la-related protein 4 isoform X1 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 102420664 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 102435235 DCP1B; mRNA-decapping enzyme 1B K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 102436917 DCP2; m7GpppN-mRNA hydrolase isoform X1 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 102425531 DDX6; probable ATP-dependent RNA helicase DDX6 isoform X1 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 102436033 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 102420898 EDC4; enhancer of mRNA-decapping protein 4 isoform X4 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 102438634 PATL1; protein PAT1 homolog 1 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 102420947 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 102426142 LSM2; U6 snRNA-associated Sm-like protein LSm2 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 102424665 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 102432463 LSM4; U6 snRNA-associated Sm-like protein LSm4 isoform X3 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 102431458 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 102435470 LSM6; U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 102430992 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 102418596 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 102418732 XRN1; 5'-3' exoribonuclease 1 isoform X2 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 102441760 XRN2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 102437955 NUDT16; U8 snoRNA-decapping enzyme K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 102433128 DCPS; m7GpppX diphosphatase isoform X3 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 102439762 HELZ; probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 102431676 EXOSC1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
E 102434149 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 106699123 LOW QUALITY PROTEIN: exosome complex component RRP40-like K03681 RRP40; exosome complex component RRP40
E 102428743 EXOSC5; exosome complex component RRP46 isoform X1 K12590 RRP46; exosome complex component RRP46
E 102424824 EXOSC6; LOW QUALITY PROTEIN: exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 102440833 exosome complex exonuclease RRP42 K12589 RRP42; exosome complex component RRP42
E 102434145 EXOSC8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 102442845 EXOSC9; exosome complex component RRP45 isoform X2 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 102422502 DIS3; exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 102440065 DIS3-like exonuclease 1 isoform X1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 102434136 EXOSC10; exosome component 10 isoform X3 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 102422292 C1D; nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 102419066 MPHOSPH6; M-phase phosphoprotein 6 isoform X2 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 102417329 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 102417647 probable ATP-dependent RNA helicase DDX60 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 102429233 PAPD7; non-canonical poly(A) RNA polymerase PAPD7 isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 102425855 PAPD5; LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 102428122 ZCCHC7; zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
E 102441903 MTREX; superkiller viralicidic activity 2-like 2 isoform X1 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 102434698 SKIV2L; helicase SKI2W isoform X2 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 102429628 TTC37; tetratricopeptide repeat protein 37 K12600 SKI3; superkiller protein 3
D Ccr4-NOT complex
E 102433418 CNOT6L; CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102420708 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 102423616 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X5 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 102438739 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 102434481 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 102429428 CNOT7; CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102418657 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 102421715 CNOT9; CCR4-NOT transcription complex subunit 9 isoform X1 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 102441809 CNOT10; CCR4-NOT transcription complex subunit 10 isoform X10 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 102431799 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 102417003 PAN3; PAN2-PAN3 deadenylation complex subunit PAN3 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 102427204 poly(A)-specific ribonuclease PARN isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 102421437 PNLDC1; poly(A)-specific ribonuclease PNLDC1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 102440903 DHX36; ATP-dependent RNA helicase DHX36 isoform X1 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 102418692 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 102423136 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 102430971 BTG3; protein BTG3 K14443 TOB; protein Tob/BTG
E 102428510 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 102435763 BTG4; protein BTG4 K14443 TOB; protein Tob/BTG
E 102423538 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 102428104 CSF2; granulocyte-macrophage colony-stimulating factor K05427 CSF2; granulocyte-macrophage colony-stimulating factor
E 102428003 NOCT; nocturnin isoform X2 K18764 NOCT; nocturnin [EC:3.1.3.108]
E 102426473 ERI1; 3'-5' exoribonuclease 1 isoform X1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 102433128 DCPS; m7GpppX diphosphatase isoform X3 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 102439543 PDE12; 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 102422140 IREB2; iron-responsive element-binding protein 2 K22416 IREB2; iron-responsive element-binding protein 2
E 102439762 HELZ; probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 102432056 HELZ2; helicase with zinc finger domain 2 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 102434332 NRDE2; protein NRDE2 homolog isoform X1 K26109 NRDE2; nuclear exosome regulator NRDE2
E 102418480 SAMD4A; protein Smaug homolog 1 K27396 SMG; protein Smaug
E 102423608 SAMD4B; protein Smaug homolog 2 isoform X1 K27396 SMG; protein Smaug
E 102443124 FOCAD; focadhesin K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 102431349 ribonuclease pancreatic-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102422773 ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102433660 ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102442644 ribonuclease pancreatic-like K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102440480 ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102420212 ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102421348 non-secretory ribonuclease K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102421648 ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 102431034 ribonuclease 4-like K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102432926 ribonuclease 4-like K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102425019 RAB7; ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102422276 RAB8; LOW QUALITY PROTEIN: ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102442954 RAB2; ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 106694324 ribonuclease 4-like K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102419900 ribonuclease 4-like K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 106694322 ribonuclease 4-like K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102417483 ribonuclease 4-like K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102418126 ribonuclease 4-like K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102418740 RAB6; ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102416950 RAB3; ribonuclease 4 K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 102436641 ribonuclease 7 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 102441286 ribonuclease K3 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 102421965 RNASE11; probable ribonuclease 11 K16633 RNASE11; ribonuclease 11 [EC:3.1.27.-]
E 102436553 ZC3H12D; LOW QUALITY PROTEIN: probable ribonuclease ZC3H12D K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 102423313 ZC3H12A; endoribonuclease ZC3H12A isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 102430446 ZC3H12C; probable ribonuclease ZC3H12C K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 102425191 ZC3H12B; probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
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AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 102431510 DROSHA; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 102417934 REXO2; oligoribonuclease, mitochondrial isoform X2 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 102430477 ENO2; gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102438782 LOW QUALITY PROTEIN: alpha-enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102441674 ENO3; beta-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102425624 ENO1; alpha-enolase isoform X2 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 102442197 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 102422671 PFKP; ATP-dependent 6-phosphofructokinase, platelet type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102422316 PFKL; ATP-dependent 6-phosphofructokinase, liver type K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 102427855 PFKM; ATP-dependent 6-phosphofructokinase, muscle type isoform X2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 102439211 HSPA9; stress-70 protein, mitochondrial isoform X1 K04043 dnaK; molecular chaperone DnaK
E 102429538 HSPD1; 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 102424371 LOW QUALITY PROTEIN: 60 kDa heat shock protein, mitochondrial-like K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 102434149 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 102431676 EXOSC1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 102440833 exosome complex exonuclease RRP42 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024