+D GENES KO #

  KEGG Orthology (KO) - Marinobacter metalliresistant

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:mmee00010] D NLK58_04595 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NLK58_15930 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NLK58_17950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NLK58_00980 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NLK58_08695 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NLK58_04520 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NLK58_10205 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NLK58_04605 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NLK58_05045 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NLK58_09335 type II glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D NLK58_08700 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NLK58_09850 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NLK58_00165 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_04525 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_01810 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NLK58_04610 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NLK58_04900 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NLK58_10075 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D NLK58_10070 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_11545 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_19270 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_14865 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NLK58_00930 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D NLK58_10495 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NLK58_10445 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D NLK58_18615 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_19100 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_02700 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NLK58_11195 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NLK58_03410 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D NLK58_14085 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:mmee00020] D NLK58_01495 gltA; (GenBank) citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NLK58_03730 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D NLK58_11765 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NLK58_04765 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NLK58_12700 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NLK58_01520 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D NLK58_01525 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_01540 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NLK58_01535 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NLK58_01510 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NLK58_01515 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NLK58_09100 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NLK58_01500 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NLK58_01505 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NLK58_19950 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NLK58_10390 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NLK58_02135 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D NLK58_10345 mqo; (GenBank) malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D NLK58_14455 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D NLK58_14460 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D NLK58_14085 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NLK58_10075 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D NLK58_10070 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NLK58_11545 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_19270 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:mmee00030] D NLK58_15930 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NLK58_02705 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NLK58_04625 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NLK58_04620 pgl; (GenBank) 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D NLK58_02710 gnd; (GenBank) decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NLK58_11045 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NLK58_05770 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NLK58_05775 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NLK58_08710 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NLK58_04980 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D NLK58_10685 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D NLK58_05500 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D NLK58_02700 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NLK58_11195 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NLK58_09405 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NLK58_09485 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NLK58_18100 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NLK58_04600 edd; (GenBank) phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D NLK58_04615 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D NLK58_00980 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NLK58_08695 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NLK58_17950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:mmee00040] D NLK58_03940 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NLK58_03765 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NLK58_11045 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:mmee00051] D NLK58_07770 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NLK58_06120 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NLK58_06045 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NLK58_11195 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NLK58_16645 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NLK58_06060 gmd; (GenBank) GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D NLK58_19965 HAD-IIB family hydrolase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D NLK58_17950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NLK58_00725 PfkB family carbohydrate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D NLK58_07765 mannitol dehydrogenase family protein K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67] D NLK58_00980 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NLK58_08695 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NLK58_04520 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NLK58_10205 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NLK58_06055 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] C 00052 Galactose metabolism [PATH:mmee00052] D NLK58_03420 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NLK58_03945 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NLK58_03765 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NLK58_02700 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NLK58_11195 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NLK58_04595 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NLK58_17950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:mmee00053] D NLK58_03940 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NLK58_03815 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:mmee00500] D NLK58_19975 sugar phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D NLK58_03765 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NLK58_02575 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NLK58_02585 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NLK58_02580 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NLK58_02555 glgP; (GenBank) alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NLK58_02590 glgP; (GenBank) alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NLK58_05510 glgP; (GenBank) alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D NLK58_02565 malQ; (GenBank) 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D NLK58_02715 isoamylase K01214 ISA; isoamylase [EC:3.2.1.68] D NLK58_02700 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NLK58_11195 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NLK58_04595 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NLK58_15930 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NLK58_07770 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:mmee00620] D NLK58_18615 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_19100 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_11545 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_19270 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_10075 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D NLK58_10070 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_00930 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D NLK58_14865 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NLK58_10495 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D NLK58_01405 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NLK58_01400 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D NLK58_01810 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NLK58_04610 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NLK58_00145 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NLK58_10715 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NLK58_10720 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NLK58_03105 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NLK58_01690 yccX; (GenBank) acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NLK58_10445 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D NLK58_08615 gloA; (GenBank) lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D NLK58_20025 VOC family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D NLK58_03005 gloB; (GenBank) hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D NLK58_16780 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D NLK58_00435 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D NLK58_00440 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NLK58_00430 OadG family transporter subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D NLK58_14455 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D NLK58_14460 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D NLK58_02135 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D NLK58_10345 mqo; (GenBank) malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D NLK58_19950 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NLK58_10390 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NLK58_18540 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NLK58_14085 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NLK58_04900 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NLK58_04690 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_04035 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D NLK58_17590 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mmee00630] D NLK58_10805 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D NLK58_04690 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D NLK58_01495 gltA; (GenBank) citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D NLK58_03730 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D NLK58_11765 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NLK58_04765 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NLK58_18615 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_19100 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05765 SDR family oxidoreductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D NLK58_08055 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D NLK58_03300 MaoC family dehydratase N-terminal domain-containing protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D NLK58_18850 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D NLK58_09975 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D NLK58_09970 glcE; (GenBank) glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D NLK58_09965 glcF; (GenBank) glycolate oxidase subunit GlcF K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D NLK58_08805 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D NLK58_04855 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NLK58_09195 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NLK58_11050 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D NLK58_10480 glnT; (GenBank) type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_16470 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_19170 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_17320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_16715 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NLK58_14150 hyi; (GenBank) hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D NLK58_14145 NAD(P)-dependent oxidoreductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D NLK58_19960 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D NLK58_18645 isocitrate/isopropylmalate dehydrogenase family protein K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D NLK58_04615 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D NLK58_12475 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D NLK58_12485 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D NLK58_15055 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D NLK58_12490 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D NLK58_15050 fdh3B; (GenBank) formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D NLK58_12495 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D NLK58_15045 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D NLK58_00780 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:mmee00640] D NLK58_18615 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_19100 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_04025 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D NLK58_01405 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NLK58_01400 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D NLK58_15290 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NLK58_15285 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NLK58_15280 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_02970 YhdH/YhfP family quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_07485 GMC family oxidoreductase N-terminal domain-containing protein K28060 dddA; 3-hydroxypropionate dehydrogenase D NLK58_00145 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NLK58_10715 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NLK58_10720 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NLK58_03105 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NLK58_19465 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D NLK58_13055 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D NLK58_01535 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NLK58_01540 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NLK58_07480 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NLK58_19040 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NLK58_03730 prpC; (GenBank) 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D NLK58_03690 prpD; (GenBank) 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D NLK58_03725 acnD; (GenBank) Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D NLK58_03720 prpF; (GenBank) 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D NLK58_11765 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NLK58_04765 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NLK58_03735 prpB; (GenBank) methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D NLK58_10805 isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D NLK58_11840 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:mmee00650] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_07650 paaC; (GenBank) 3-hydroxyacyl-CoA dehydrogenase PaaC K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NLK58_14475 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_03300 MaoC family dehydratase N-terminal domain-containing protein K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D NLK58_18850 MaoC family dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D NLK58_04400 phaC; (GenBank) class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D NLK58_08060 phaC; (GenBank) class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D NLK58_20160 phaZ; (GenBank) polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75] D NLK58_05765 SDR family oxidoreductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D NLK58_08055 fabG; (GenBank) 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D NLK58_00440 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NLK58_14985 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D NLK58_14980 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] D NLK58_18645 isocitrate/isopropylmalate dehydrogenase family protein K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D NLK58_19475 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D NLK58_01510 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NLK58_01515 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NLK58_09100 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NLK58_01500 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NLK58_01505 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NLK58_11305 panP; (GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D NLK58_13055 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D NLK58_01955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NLK58_11640 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NLK58_11545 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_19270 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_19315 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D NLK58_12705 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D NLK58_12710 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D NLK58_12735 D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22] D NLK58_10330 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_17530 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_19240 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_17535 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NLK58_19385 ACT domain-containing protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:mmee00660] D NLK58_10330 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_17530 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_19240 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_17535 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NLK58_19385 ACT domain-containing protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D NLK58_01805 4-hydroxybutyrate CoA-transferase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-] D NLK58_01535 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NLK58_01540 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NLK58_03150 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NLK58_03145 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NLK58_03140 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:mmee00562] D NLK58_01330 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NLK58_10975 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NLK58_07480 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NLK58_19040 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NLK58_04520 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NLK58_10205 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:mmee00190] D NLK58_19725 ndhC; (GenBank) NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D NLK58_19805 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D NLK58_19730 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D NLK58_19735 nuoC; (GenBank) NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D NLK58_19740 nuoE; (GenBank) NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D NLK58_19745 nuoF; (GenBank) NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D NLK58_19750 nuoG; (GenBank) NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D NLK58_19755 nuoH; (GenBank) NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D NLK58_19815 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D NLK58_19760 nuoI; (GenBank) NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D NLK58_19765 nuoJ; (GenBank) NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D NLK58_19820 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D NLK58_19770 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D NLK58_19775 nuoL; (GenBank) NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D NLK58_19830 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D NLK58_19780 nuoM; (GenBank) NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D NLK58_19835 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D NLK58_19785 nuoN; (GenBank) NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D NLK58_19825 nuoK; (GenBank) NADH-quinone oxidoreductase subunit NuoK K05576 ndhE; NAD(P)H-quinone oxidoreductase subunit 4L [EC:7.1.1.2] D NLK58_12540 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D NLK58_01510 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NLK58_01515 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NLK58_09100 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NLK58_01500 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NLK58_01505 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NLK58_17625 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D NLK58_17630 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NLK58_17635 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D NLK58_12795 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NLK58_09045 cytochrome c oxidase subunit 3 family protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D NLK58_12820 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D NLK58_12825 ctaD; (GenBank) cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D NLK58_12830 coxB; (GenBank) cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D NLK58_12800 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NLK58_04285 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D NLK58_04290 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D NLK58_04295 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D NLK58_04300 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D NLK58_13215 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NLK58_13225 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NLK58_14715 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NLK58_13220 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NLK58_14755 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NLK58_13210 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NLK58_13230 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NLK58_14720 ATPase K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NLK58_13195 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NLK58_14735 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NLK58_13205 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NLK58_14745 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NLK58_13200 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NLK58_14740 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NLK58_10695 ppa; (GenBank) inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D NLK58_11270 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NLK58_09355 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:mmee00710] D NLK58_08700 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NLK58_04605 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NLK58_05045 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NLK58_09335 type II glyceraldehyde-3-phosphate dehydrogenase K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D NLK58_00980 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NLK58_08695 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NLK58_05770 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NLK58_05775 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NLK58_08710 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NLK58_10685 rpiA; (GenBank) ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D NLK58_11160 phosphoribulokinase K28462 prkA_B; phosphoribulokinase [EC:2.7.1.19] D NLK58_04520 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NLK58_10205 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NLK58_11045 rpe; (GenBank) ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D NLK58_04980 tal; (GenBank) transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D NLK58_18540 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NLK58_14085 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D NLK58_16780 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] C 00720 Other carbon fixation pathways [PATH:mmee00720] D NLK58_11545 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_19270 nifJ; (GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D NLK58_04900 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NLK58_18540 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NLK58_14455 acetyl-CoA carboxylase biotin carboxylase subunit K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D NLK58_14460 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D NLK58_19950 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D NLK58_10390 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D NLK58_01510 sdhA; (GenBank) succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D NLK58_01515 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NLK58_09100 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D NLK58_01500 sdhC; (GenBank) succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D NLK58_01505 sdhD; (GenBank) succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D NLK58_01540 sucD; (GenBank) succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D NLK58_01535 sucC; (GenBank) ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_12700 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NLK58_11765 acnA; (GenBank) aconitate hydratase AcnA K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NLK58_04765 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D NLK58_00145 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NLK58_10715 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NLK58_10720 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NLK58_03105 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NLK58_07970 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D NLK58_04685 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NLK58_07975 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NLK58_08730 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NLK58_01400 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D NLK58_01405 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NLK58_18615 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_19100 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:mmee00680] D NLK58_14865 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NLK58_14385 fghA; (GenBank) S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D NLK58_12485 fdhF; (GenBank) formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D NLK58_15055 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D NLK58_12490 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D NLK58_15050 fdh3B; (GenBank) formate dehydrogenase FDH3 subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D NLK58_12495 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D NLK58_15045 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma D NLK58_12475 formate dehydrogenase subunit delta K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9] D NLK58_17320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NLK58_08805 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D NLK58_00165 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_04525 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_18540 ppc; (GenBank) phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D NLK58_00980 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NLK58_08695 fba; (GenBank) fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D NLK58_17950 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D NLK58_01405 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D NLK58_01400 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D NLK58_18615 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_19100 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_04900 ppsA; (GenBank) phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D NLK58_09850 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NLK58_07095 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NLK58_00790 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_09010 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_06945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D NLK58_03235 thrH; (GenBank) bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] C 00910 Nitrogen metabolism [PATH:mmee00910] D NLK58_08975 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D NLK58_09695 antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D NLK58_09705 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D NLK58_09715 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D NLK58_12115 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NLK58_19365 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NLK58_12120 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NLK58_19370 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NLK58_12125 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NLK58_19375 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NLK58_08970 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D NLK58_08965 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D NLK58_08955 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D NLK58_12110 molybdopterin-dependent oxidoreductase K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D NLK58_12135 FAD-dependent oxidoreductase K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D NLK58_12140 nirB; (GenBank) nitrite reductase large subunit NirB K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D NLK58_12145 nirD; (GenBank) nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D NLK58_09630 nitrite reductase K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] D NLK58_09060 cbb3-type cytochrome c oxidase subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D NLK58_09580 cbb3-type cytochrome c oxidase subunit I K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D NLK58_09065 cytochrome c K02305 norC; nitric oxide reductase subunit C D NLK58_09575 cytochrome c K02305 norC; nitric oxide reductase subunit C D NLK58_08925 nosZ; (GenBank) TAT-dependent nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D NLK58_08660 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D NLK58_13710 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D NLK58_07630 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NLK58_13635 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D NLK58_10480 glnT; (GenBank) type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_16470 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_19170 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_16830 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NLK58_16835 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NLK58_19380 cynS; (GenBank) cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] D NLK58_14710 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D NLK58_05110 can; (GenBank) carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:mmee00920] D NLK58_17160 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D NLK58_17165 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D NLK58_17170 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D NLK58_06000 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D NLK58_06690 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D NLK58_06005 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NLK58_06685 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NLK58_05995 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D NLK58_06285 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NLK58_06365 hypothetical protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NLK58_03240 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D NLK58_10360 sulfite oxidase K00387 SUOX; sulfite oxidase [EC:1.8.3.1] D NLK58_08115 soxC; (GenBank) sulfite dehydrogenase K17225 soxC; sulfane dehydrogenase subunit SoxC D NLK58_08120 cytochrome c K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D NLK58_02160 PepSY domain-containing protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D NLK58_02960 nitrite/sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D NLK58_15500 c-type cytochrome K17230 fccA; cytochrome subunit of sulfide dehydrogenase D NLK58_08430 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D NLK58_12455 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NLK58_01340 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NLK58_11850 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NLK58_12380 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NLK58_15690 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D NLK58_03080 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D NLK58_01920 long-chain-fatty-acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D NLK58_19525 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D NLK58_06760 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D NLK58_06765 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D NLK58_13145 acyl-CoA dehydrogenase C-terminal domain-containing protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:mmee00061] D NLK58_00145 accA; (GenBank) acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D NLK58_10715 accB; (GenBank) acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D NLK58_10720 accC; (GenBank) acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D NLK58_03105 accD; (GenBank) acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D NLK58_04815 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein D NLK58_04825 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NLK58_02100 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NLK58_08220 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NLK58_09755 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NLK58_18040 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NLK58_04810 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NLK58_04820 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_05540 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_05635 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_09750 fabA; (GenBank) bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D NLK58_20135 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NLK58_03035 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NLK58_01175 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_03295 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_07365 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:mmee00071] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_01480 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_14475 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NLK58_01905 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NLK58_10690 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NLK58_18720 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NLK58_17965 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D NLK58_19350 acyl-CoA dehydrogenase family protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D NLK58_11465 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D NLK58_13830 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D NLK58_14465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NLK58_01175 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_03295 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_07365 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_07180 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D NLK58_02235 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D NLK58_11340 FAD-dependent oxidoreductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D NLK58_14865 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NLK58_00930 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis [PATH:mmee00073] D NLK58_18610 fatty acyl-CoA reductase K13356 FAR; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] D NLK58_20300 SDR family oxidoreductase K28138 acrB; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] D NLK58_08855 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_10305 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_10565 WS/DGAT domain-containing protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_12150 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_17375 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] C 00074 Mycolic acid biosynthesis D NLK58_04815 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein D NLK58_04825 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] C 00100 Steroid biosynthesis D NLK58_03270 DUF3336 domain-containing protein K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:mmee00561] D NLK58_19960 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NLK58_04565 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D NLK58_18305 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D NLK58_18570 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D NLK58_04830 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NLK58_15915 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NLK58_11450 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NLK58_11805 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NLK58_08855 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_10305 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_10565 WS/DGAT domain-containing protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_12150 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_17375 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D NLK58_10945 alpha/beta fold hydrolase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D NLK58_16020 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D NLK58_03270 DUF3336 domain-containing protein K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D NLK58_08635 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:mmee00564] D NLK58_02810 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D NLK58_01975 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D NLK58_04575 glpD; (GenBank) glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D NLK58_18570 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D NLK58_15915 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NLK58_11450 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NLK58_11805 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NLK58_03270 DUF3336 domain-containing protein K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D NLK58_15325 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D NLK58_04995 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D NLK58_20105 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D NLK58_17545 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NLK58_01825 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D NLK58_06915 asd; (GenBank) archaetidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D NLK58_01740 pgsA; (GenBank) CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D NLK58_17355 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D NLK58_09340 phospholipase D-like domain-containing protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D NLK58_15585 cls; (GenBank) cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D NLK58_00300 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism [PATH:mmee00565] D NLK58_01980 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] D NLK58_03270 DUF3336 domain-containing protein K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D NLK58_15325 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:mmee00600] D NLK58_03510 hypothetical protein K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00590 Arachidonic acid metabolism D NLK58_03270 DUF3336 domain-containing protein K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D NLK58_15325 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D NLK58_03270 DUF3336 domain-containing protein K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D NLK58_15325 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:mmee00592] D NLK58_03270 DUF3336 domain-containing protein K14674 TGL4; TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51] D NLK58_15325 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D NLK58_01480 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:mmee01040] D NLK58_02835 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D NLK58_14115 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D NLK58_08870 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D NLK58_08865 FAD-binding oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D NLK58_00910 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NLK58_11335 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NLK58_11535 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:mmee00230] D NLK58_16690 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D NLK58_02700 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NLK58_11195 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NLK58_09405 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NLK58_09485 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NLK58_18100 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D NLK58_03085 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NLK58_10750 purD; (GenBank) phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D NLK58_00285 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NLK58_20480 purT; (GenBank) formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D NLK58_20425 purL; (GenBank) phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D NLK58_00290 purM; (GenBank) phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D NLK58_05580 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D NLK58_05575 purE; (GenBank) 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D NLK58_03825 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D NLK58_04190 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NLK58_10745 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NLK58_07070 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D NLK58_00190 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NLK58_14100 yrfG; (GenBank) GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D NLK58_07230 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D NLK58_17515 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NLK58_11350 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D NLK58_04015 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NLK58_01355 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NLK58_15675 rdgB; (GenBank) RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D NLK58_04010 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NLK58_19020 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NLK58_15780 gmk; (GenBank) guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D NLK58_01150 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NLK58_13430 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NLK58_13435 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D NLK58_12210 yfbR; (GenBank) 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D NLK58_15790 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NLK58_15400 ppx; (GenBank) exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D NLK58_18520 relA; (GenBank) GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D NLK58_01230 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D NLK58_15520 class I adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D NLK58_06835 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NLK58_11655 ppnN; (GenBank) nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D NLK58_18550 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NLK58_18525 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NLK58_16700 cpdA; (GenBank) 3',5'-cyclic-AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D NLK58_11000 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D NLK58_05995 cysC; (GenBank) adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D NLK58_06000 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D NLK58_06690 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D NLK58_06005 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NLK58_06685 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NLK58_08525 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D NLK58_08530 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D NLK58_08535 ureA; (GenBank) urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D NLK58_14710 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:mmee00240] D NLK58_10240 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NLK58_10245 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NLK58_14055 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NLK58_14060 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NLK58_20320 pyrC; (GenBank) dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D NLK58_11540 dihydroorotate dehydrogenase-like protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D NLK58_19275 dihydroorotate dehydrogenase-like protein K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D NLK58_00870 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D NLK58_09015 hypothetical protein K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D NLK58_15755 pyrE; (GenBank) orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D NLK58_00835 pyrF; (GenBank) orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D NLK58_20090 pyrH; (GenBank) UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D NLK58_01355 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NLK58_18525 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NLK58_06640 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D NLK58_00155 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D NLK58_00810 cmk; (GenBank) (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D NLK58_00190 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NLK58_07230 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D NLK58_05315 upp; (GenBank) uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D NLK58_14050 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D NLK58_11655 ppnN; (GenBank) nucleotide 5'-monophosphate nucleosidase PpnN K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D NLK58_00265 dcd; (GenBank) dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D NLK58_01150 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NLK58_13430 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NLK58_13435 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D NLK58_12210 yfbR; (GenBank) 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D NLK58_04795 tmk; (GenBank) dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D NLK58_11200 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NLK58_09410 thymidine phosphorylase family protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D NLK58_09490 hypothetical protein K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D NLK58_17820 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:mmee00250] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_18435 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NLK58_11390 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NLK58_03465 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NLK58_04230 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D NLK58_08365 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NLK58_11440 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NLK58_05685 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NLK58_15510 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NLK58_06835 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D NLK58_04190 purB; (GenBank) adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D NLK58_14055 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D NLK58_11305 panP; (GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D NLK58_13055 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D NLK58_01955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NLK58_11640 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NLK58_16830 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NLK58_16835 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D NLK58_07630 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NLK58_13635 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D NLK58_07625 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NLK58_10480 glnT; (GenBank) type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_16470 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_19170 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_10240 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NLK58_10245 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NLK58_13240 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NLK58_03085 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:mmee00260] D NLK58_00385 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NLK58_12245 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NLK58_03135 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NLK58_18385 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NLK58_03235 thrH; (GenBank) bifunctional phosphoserine phosphatase/homoserine phosphotransferase ThrH K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D NLK58_18390 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D NLK58_17320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NLK58_08805 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D NLK58_09850 gpmI; (GenBank) 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D NLK58_19960 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D NLK58_07095 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NLK58_00790 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_09010 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_06945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_16715 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D NLK58_17545 pssA; (GenBank) CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D NLK58_07960 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NLK58_10680 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NLK58_03110 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NLK58_03115 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NLK58_08830 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NLK58_12250 ectB; (GenBank) diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D NLK58_12255 ectA; (GenBank) diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D NLK58_12755 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] C 00270 Cysteine and methionine metabolism [PATH:mmee00270] D NLK58_01340 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NLK58_11850 cysK; (GenBank) cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NLK58_12380 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D NLK58_13845 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NLK58_02950 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NLK58_16705 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D NLK58_08720 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NLK58_11150 speD; (GenBank) adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D NLK58_15635 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D NLK58_17515 pgeF; (GenBank) peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D NLK58_20375 TRZ/ATZ family hydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D NLK58_05060 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D NLK58_20380 mtnA; (GenBank) S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D NLK58_00100 methylthioribulose 1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109] D NLK58_00110 mtnC; (GenBank) acireductone synthase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77] D NLK58_00105 cupin K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54] D NLK58_08500 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NLK58_08725 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NLK58_00385 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NLK58_12245 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NLK58_03135 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NLK58_18385 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NLK58_15690 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D NLK58_18065 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D NLK58_03080 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D NLK58_16555 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NLK58_15355 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D NLK58_14030 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_12455 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NLK58_07960 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D NLK58_18510 cysM; (GenBank) cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D NLK58_07095 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NLK58_00790 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_09010 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:mmee00280] D NLK58_16555 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NLK58_07305 NAD(P)-binding domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D NLK58_15290 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NLK58_15285 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NLK58_15280 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_01905 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NLK58_10690 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NLK58_18720 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D NLK58_19335 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_01480 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D NLK58_19060 mmsB; (GenBank) 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D NLK58_07480 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NLK58_19040 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NLK58_19470 malonyl-CoA synthase K18661 matB; malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.76 6.2.1.-] D NLK58_13055 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D NLK58_19320 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D NLK58_19330 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D NLK58_19325 enoyl-CoA hydratase-related protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D NLK58_19315 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D NLK58_12705 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:mmee00290] D NLK58_10680 ilvA; (GenBank) threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D NLK58_03150 leuC; (GenBank) 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D NLK58_03145 leuD; (GenBank) 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D NLK58_03140 leuB; (GenBank) 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D NLK58_10330 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_17530 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_19240 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_17535 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NLK58_19385 ACT domain-containing protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D NLK58_17540 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NLK58_11400 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NLK58_17855 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NLK58_16555 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NLK58_07305 NAD(P)-binding domain-containing protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D NLK58_00275 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D NLK58_04230 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D NLK58_04035 leuA; (GenBank) 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D NLK58_17590 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:mmee00300] D NLK58_18385 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D NLK58_00385 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NLK58_12245 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NLK58_03135 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NLK58_03835 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NLK58_10250 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D NLK58_20055 dapD; (GenBank) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D NLK58_20065 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D NLK58_20050 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D NLK58_15535 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NLK58_15530 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NLK58_17695 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NLK58_17700 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:mmee00310] D NLK58_01525 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_14465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_13055 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D NLK58_01955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NLK58_11640 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NLK58_18660 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D NLK58_01960 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:mmee00220] D NLK58_14705 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D NLK58_18315 argF; (GenBank) ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D NLK58_05685 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NLK58_15510 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NLK58_10460 uca; (GenBank) urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D NLK58_08570 atzF; (GenBank) allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D NLK58_08525 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D NLK58_08530 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D NLK58_08535 ureA; (GenBank) urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D NLK58_14700 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D NLK58_10480 glnT; (GenBank) type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_16470 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_19170 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_10240 carB; (GenBank) carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D NLK58_10245 carA; (GenBank) glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D NLK58_14710 arcC; (GenBank) carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D NLK58_07630 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NLK58_13635 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_04230 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D NLK58_11175 argA; (GenBank) amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D NLK58_17770 argJ; (GenBank) bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D NLK58_11190 argB; (GenBank) acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D NLK58_16050 argC; (GenBank) N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] C 00330 Arginine and proline metabolism [PATH:mmee00330] D NLK58_15630 speA; (GenBank) biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D NLK58_04125 carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D NLK58_12765 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NLK58_15635 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D NLK58_11150 speD; (GenBank) adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NLK58_05490 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_14340 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_19410 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_07375 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D NLK58_10055 astA; (GenBank) arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D NLK58_10060 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D NLK58_10045 astB; (GenBank) N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D NLK58_10065 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D NLK58_10050 astD; (GenBank) succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D NLK58_10025 astE; (GenBank) succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D NLK58_19175 FAD-binding oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D NLK58_19190 aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99] D NLK58_15705 proC; (GenBank) pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D NLK58_07625 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NLK58_17410 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NLK58_17885 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D NLK58_16485 pip; (GenBank) prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_19095 proline racemase family protein K22548 lhpL; trans-L-3-hydroxyproline dehydratase [EC:4.2.1.77] D NLK58_07890 mandelate racemase K21624 c3lhypd; cis-L-3-hydroxyproline dehydratase [EC:4.2.1.171] C 00340 Histidine metabolism [PATH:mmee00340] D NLK58_06525 hisG; (GenBank) ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D NLK58_06840 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D NLK58_10605 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D NLK58_10600 hisI; (GenBank) phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D NLK58_09875 hisA; (GenBank) 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D NLK58_09880 hisH; (GenBank) imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D NLK58_09870 hisF; (GenBank) imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D NLK58_09885 hisB; (GenBank) imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D NLK58_00800 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_06515 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_06520 hisD; (GenBank) histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00350 Tyrosine metabolism [PATH:mmee00350] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_00800 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_06515 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_14865 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NLK58_00930 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D NLK58_01955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NLK58_11640 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:mmee00360] D NLK58_07665 paaF; (GenBank) phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D NLK58_07655 paaI; (GenBank) hydroxyphenylacetyl-CoA thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D NLK58_07670 paaA; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D NLK58_07675 paaB; (GenBank) 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D NLK58_07680 paaC; (GenBank) phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D NLK58_07685 paaJ; (GenBank) phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D NLK58_07690 paaK; (GenBank) phenylacetate-CoA oxygenase/reductase subunit PaaK K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D NLK58_07645 paaG; (GenBank) 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D NLK58_07695 paaZ; (GenBank) phenylacetic acid degradation bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91] D NLK58_07650 paaC; (GenBank) 3-hydroxyacyl-CoA dehydrogenase PaaC K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_00800 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_06515 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_01965 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D NLK58_07240 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D NLK58_11705 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D NLK58_00970 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] D NLK58_05490 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_14340 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_19410 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:mmee00380] D NLK58_01525 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_14465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NLK58_05490 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_14340 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_19410 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_00970 katG; (GenBank) catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:mmee00400] D NLK58_03050 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NLK58_10895 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NLK58_04990 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NLK58_16820 aroB; (GenBank) 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D NLK58_10710 aroQ; (GenBank) type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D NLK58_12890 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D NLK58_07575 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D NLK58_16815 aroK; (GenBank) shikimate kinase AroK K00891 aroK; shikimate kinase [EC:2.7.1.71] D NLK58_00805 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D NLK58_03170 aroC; (GenBank) chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D NLK58_11055 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NLK58_11060 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NLK58_11065 trpD; (GenBank) anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D NLK58_03120 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D NLK58_11070 trpC; (GenBank) indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D NLK58_03110 trpA; (GenBank) tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D NLK58_03115 trpB; (GenBank) tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NLK58_08830 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D NLK58_00795 pheA; (GenBank) prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_00800 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_06515 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:mmee00410] D NLK58_11305 panP; (GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D NLK58_13055 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NLK58_15935 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_19465 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D NLK58_07480 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D NLK58_19040 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:mmee00430] D NLK58_11305 panP; (GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D NLK58_00775 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NLK58_08365 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NLK58_11440 ald; (GenBank) alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D NLK58_07630 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D NLK58_01400 pta; (GenBank) phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D NLK58_01405 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:mmee00450] D NLK58_13845 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NLK58_02950 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NLK58_16705 metE; (GenBank) 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D NLK58_09785 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D NLK58_04135 trxB; (GenBank) thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D NLK58_06000 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D NLK58_06690 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D NLK58_06005 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NLK58_06685 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NLK58_09020 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D NLK58_00255 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:mmee00460] D NLK58_00775 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NLK58_11390 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D NLK58_17320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:mmee00470] D NLK58_18020 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NLK58_17730 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NLK58_18580 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NLK58_17710 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NLK58_15535 dapF; (GenBank) diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D NLK58_15530 lysA; (GenBank) diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D NLK58_01965 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D NLK58_07240 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D NLK58_11705 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:mmee00480] D NLK58_00775 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NLK58_13770 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D NLK58_07610 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D NLK58_15355 gshA; (GenBank) glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D NLK58_14030 gshB; (GenBank) glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D NLK58_00360 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NLK58_19655 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NLK58_08200 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NLK58_11115 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NLK58_02040 gorA; (GenBank) glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D NLK58_12700 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NLK58_02710 gnd; (GenBank) decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D NLK58_02705 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NLK58_04625 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NLK58_04225 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D NLK58_13670 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27] D NLK58_12765 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NLK58_15635 speE; (GenBank) polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D NLK58_11435 B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mmee00520] D NLK58_16070 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D NLK58_20365 gph; (GenBank) phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D NLK58_11025 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D NLK58_11030 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D NLK58_13235 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NLK58_06530 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NLK58_04050 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NLK58_10210 glmM; (GenBank) phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D NLK58_13240 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NLK58_07770 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D NLK58_15930 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NLK58_06120 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NLK58_03570 SDR family oxidoreductase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D NLK58_03815 NAD-dependent epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D NLK58_04595 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NLK58_02700 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NLK58_11195 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NLK58_03765 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NLK58_03940 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NLK58_03420 SDR family oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NLK58_03945 galE; (GenBank) UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D NLK58_06045 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D NLK58_16645 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NLK58_02575 glgC; (GenBank) glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D NLK58_06260 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_16610 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:mmee00541] D NLK58_13235 glmU; (GenBank) bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D NLK58_05945 tviB; (GenBank) Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D NLK58_05790 pseB; (GenBank) UDP-N-acetylglucosamine 4,6-dehydratase (inverting) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.115] D NLK58_05985 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D NLK58_06210 SDR family oxidoreductase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426] D NLK58_06565 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D NLK58_00160 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D NLK58_06570 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D NLK58_04060 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NLK58_17650 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D NLK58_12945 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D NLK58_03765 galU; (GenBank) UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D NLK58_03940 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D NLK58_15440 2Fe-2S iron-sulfur cluster-binding protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D NLK58_06260 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_16610 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_06160 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NLK58_16605 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NLK58_06030 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NLK58_06255 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NLK58_06150 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D NLK58_18030 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D NLK58_16625 rffA; (GenBank) dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D NLK58_16620 acyltransferase K21379 vioB; dTDP-4-amino-4,6-dideoxy-D-glucose acyltransferase [EC:2.3.1.209] D NLK58_16645 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D NLK58_06120 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D NLK58_06060 gmd; (GenBank) GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D NLK58_06055 GDP-mannose 4,6-dehydratase K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation D NLK58_03510 hypothetical protein K01201 GBA; glucosylceramidase [EC:3.2.1.45] C 00540 Lipopolysaccharide biosynthesis [PATH:mmee00540] D NLK58_20140 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NLK58_17750 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D NLK58_20130 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D NLK58_04710 lpxH; (GenBank) UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D NLK58_20145 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D NLK58_04070 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D NLK58_16675 waaA; (GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D NLK58_16670 lpxL; (GenBank) LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D NLK58_01070 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D NLK58_16585 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] C 00542 O-Antigen repeat unit biosynthesis C 00550 Peptidoglycan biosynthesis [PATH:mmee00550] D NLK58_06530 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NLK58_04050 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NLK58_17725 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NLK58_17710 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NLK58_17695 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NLK58_17730 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NLK58_17700 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NLK58_20100 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NLK58_11625 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NLK58_18265 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D NLK58_17705 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NLK58_17720 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NLK58_08125 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_16785 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NLK58_15995 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D NLK58_17715 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_17910 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_17905 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NLK58_17690 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NLK58_17920 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NLK58_18745 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:mmee00552] D NLK58_11625 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NLK58_18265 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D NLK58_08635 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D NLK58_05985 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:mmee00543] D NLK58_16615 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D NLK58_01340 cysE; (GenBank) serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D NLK58_06240 polysaccharide pyruvyl transferase family protein K13665 gumL; pyruvyltransferase B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:mmee00730] D NLK58_16685 thiC; (GenBank) phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D NLK58_16035 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D NLK58_01350 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NLK58_11650 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NLK58_17790 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NLK58_10985 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D NLK58_16030 thiE; (GenBank) thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D NLK58_17350 thiL; (GenBank) thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D NLK58_06900 rsgA; (GenBank) small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NLK58_07160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_07165 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_18550 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:mmee00740] D NLK58_17785 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NLK58_17335 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NLK58_17330 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NLK58_17340 ribE; (GenBank) 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D NLK58_05085 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D NLK58_17425 ribF; (GenBank) bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D NLK58_16690 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D NLK58_17960 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:mmee00750] D NLK58_12225 pdxH; (GenBank) pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D NLK58_08705 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D NLK58_04245 pdxB; (GenBank) 4-phosphoerythronate dehydrogenase PdxB K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D NLK58_00790 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_09010 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_11010 pdxA; (GenBank) 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D NLK58_18500 pdxJ; (GenBank) pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D NLK58_18390 thrC; (GenBank) threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:mmee00760] D NLK58_18435 nadB; (GenBank) L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D NLK58_03860 nadA; (GenBank) quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D NLK58_00320 nadC; (GenBank) carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D NLK58_00190 surE; (GenBank) 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D NLK58_17890 nadD; (GenBank) nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D NLK58_18525 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NLK58_18575 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D NLK58_17500 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D NLK58_19565 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D NLK58_07085 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D NLK58_19630 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D NLK58_05000 sthA; (GenBank) Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D NLK58_13760 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D NLK58_13755 pntB; (GenBank) Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D NLK58_19475 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1] D NLK58_01955 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D NLK58_11640 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:mmee00770] D NLK58_10330 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_17530 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_19240 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D NLK58_17535 ilvN; (GenBank) acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D NLK58_19385 ACT domain-containing protein K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D NLK58_17540 ilvC; (GenBank) ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D NLK58_11400 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NLK58_17855 ilvD; (GenBank) dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D NLK58_15940 panB; (GenBank) 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D NLK58_00345 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D NLK58_15935 panC; (GenBank) pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D NLK58_16115 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D NLK58_11205 coaBC; (GenBank) bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D NLK58_18525 mazG; (GenBank) nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D NLK58_11260 coaD; (GenBank) pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D NLK58_06440 coaE; (GenBank) dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D NLK58_12230 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D NLK58_02445 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D NLK58_16555 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:mmee00780] D NLK58_06780 bioC; (GenBank) malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D NLK58_09755 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NLK58_18040 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NLK58_04810 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NLK58_04820 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_05540 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_05635 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_20135 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NLK58_03035 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NLK58_06785 alpha/beta fold hydrolase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D NLK58_06790 bioF; (GenBank) 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NLK58_08765 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NLK58_06775 bioD; (GenBank) dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D NLK58_06795 bioB; (GenBank) biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D NLK58_16110 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NLK58_15085 C 00785 Lipoic acid metabolism [PATH:mmee00785] D NLK58_17930 lipB; (GenBank) lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D NLK58_18060 lipA; (GenBank) lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_10075 aceE; (GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D NLK58_10070 aceF; (GenBank) dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D NLK58_01520 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D NLK58_01525 odhB; (GenBank) 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D NLK58_15290 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D NLK58_15285 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D NLK58_15280 dihydrolipoyllysine-residue acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D NLK58_16715 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:mmee00790] D NLK58_13960 folE; (GenBank) GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D NLK58_07160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_07165 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_11415 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NLK58_15920 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D NLK58_15925 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D NLK58_15945 folK; (GenBank) 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D NLK58_10215 folP; (GenBank) dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D NLK58_17825 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NLK58_03100 folC; (GenBank) bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D NLK58_17785 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NLK58_17335 ribBA; (GenBank) bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D NLK58_03230 pabB; (GenBank) aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D NLK58_04805 aminotransferase class IV K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D NLK58_13955 folX; (GenBank) dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D NLK58_00460 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NLK58_09825 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33] D NLK58_12620 queE; (GenBank) 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NLK58_12625 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NLK58_01225 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NLK58_08900 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NLK58_17780 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NLK58_15410 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NLK58_15425 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D NLK58_15095 molybdopterin-binding protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D NLK58_15420 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D NLK58_15105 mobA; (GenBank) molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] D NLK58_04930 C 00670 One carbon pool by folate [PATH:mmee00670] D NLK58_17825 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NLK58_07970 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D NLK58_04685 folD; (GenBank) bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D NLK58_17320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NLK58_00285 purN; (GenBank) phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D NLK58_10745 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NLK58_02950 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D NLK58_17820 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NLK58_00780 purU; (GenBank) formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D NLK58_07975 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NLK58_08730 metF; (GenBank) methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D NLK58_10670 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D NLK58_08720 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NLK58_08725 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_16715 gcvH; (GenBank) glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:mmee00860] D NLK58_04950 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NLK58_18125 hemA; (GenBank) glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D NLK58_01815 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NLK58_16025 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NLK58_11275 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NLK58_15460 hemC; (GenBank) hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D NLK58_15455 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D NLK58_16840 hemE; (GenBank) uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D NLK58_12895 hemF; (GenBank) oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D NLK58_09070 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D NLK58_09190 hemN; (GenBank) oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D NLK58_16040 hemJ; (GenBank) protoporphyrinogen oxidase HemJ K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D NLK58_02895 hemH; (GenBank) ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D NLK58_15450 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D NLK58_09660 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D NLK58_03055 cobA; (GenBank) uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D NLK58_09635 AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D NLK58_09640 AsnC family protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D NLK58_09645 Lrp/AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D NLK58_09650 Lrp/AsnC family transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D NLK58_09665 nitrite reductase K24867 nirN; dihydro-heme d1 dehydrogenase D NLK58_12795 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NLK58_12800 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NLK58_01430 CbiX/SirB N-terminal domain-containing protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D NLK58_20470 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NLK58_15315 bfr; (GenBank) bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mmee00130] D NLK58_03905 YbgC/FadM family acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D NLK58_11355 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D NLK58_11360 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NLK58_15435 ubiD; (GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D NLK58_17960 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D NLK58_10635 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D NLK58_09170 U32 family peptidase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D NLK58_09165 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D NLK58_08990 SCP2 sterol-binding domain-containing protein K24843 ubiT; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT D NLK58_20370 ubiG; (GenBank) bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D NLK58_10640 ubiH; (GenBank) 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D NLK58_10585 ubiE; (GenBank) bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D NLK58_11500 FAD-dependent monooxygenase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D NLK58_14895 hotdog fold thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D NLK58_13835 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D NLK58_07925 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D NLK58_09675 wrbA; (GenBank) NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:mmee00900] D NLK58_17790 dxs; (GenBank) 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D NLK58_20110 ispC; (GenBank) 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D NLK58_00175 ispD; (GenBank) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D NLK58_18110 ispE; (GenBank) 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D NLK58_00180 ispF; (GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D NLK58_01375 ispG; (GenBank) flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D NLK58_17445 ispH; (GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_17960 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D NLK58_17795 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D NLK58_17390 ispB; (GenBank) octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NLK58_20100 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:mmee00907] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_07020 SDR family oxidoreductase K13774 atuB; citronellol/citronellal dehydrogenase D NLK58_07045 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase D NLK58_07050 long-chain-acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-] D NLK58_07030 atuD; (GenBank) citronellyl-CoA dehydrogenase K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-] D NLK58_07040 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5] D NLK58_07025 acyl-CoA carboxylase subunit beta K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5] D NLK58_07035 enoyl-CoA hydratase-related protein K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57] D NLK58_19315 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D NLK58_01480 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D NLK58_05770 transketolase family protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NLK58_05775 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D NLK58_08710 tkt; (GenBank) transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:mmee00523] D NLK58_06260 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_16610 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_06160 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NLK58_16605 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NLK58_06030 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NLK58_06255 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NLK58_06150 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D NLK58_18030 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D NLK58_06160 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NLK58_16605 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:mmee00332] D NLK58_17410 proB; (GenBank) glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D NLK58_17885 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:mmee00261] D NLK58_06000 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D NLK58_06690 cysN; (GenBank) sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D NLK58_06005 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NLK58_06685 cysD; (GenBank) sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D NLK58_00385 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NLK58_12245 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D NLK58_03135 asd; (GenBank) aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D NLK58_03835 dapA; (GenBank) 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D NLK58_10250 dapB; (GenBank) 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:mmee00521] D NLK58_04595 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D NLK58_02700 pgm; (GenBank) phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D NLK58_11195 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D NLK58_01330 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NLK58_10975 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D NLK58_06260 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_16610 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_06160 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NLK58_16605 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NLK58_06030 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NLK58_06255 rfbC; (GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D NLK58_06150 rfbD; (GenBank) dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D NLK58_18030 NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D NLK58_04595 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:mmee00525] D NLK58_06260 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_16610 rfbA; (GenBank) glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D NLK58_06160 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D NLK58_16605 rfbB; (GenBank) dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:mmee00401] D NLK58_00805 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_00800 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_06515 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D NLK58_11055 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NLK58_11060 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D NLK58_04825 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NLK58_04820 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_05540 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_05635 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_03035 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D NLK58_04815 acpP; (GenBank) acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:mmee00999] D NLK58_08720 metK; (GenBank) methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D NLK58_12890 aroE; (GenBank) shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:mmee00362] D NLK58_15015 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D NLK58_15020 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D NLK58_15025 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D NLK58_15030 benD; (GenBank) benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D NLK58_15010 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D NLK58_15000 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D NLK58_15005 catC; (GenBank) muconolactone Delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D NLK58_14970 alpha/beta fold hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D NLK58_01480 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D NLK58_07660 pcaF; (GenBank) 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D NLK58_14975 pcaF; (GenBank) 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D NLK58_03905 YbgC/FadM family acyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_14475 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D NLK58_00440 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NLK58_14465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D NLK58_07650 paaC; (GenBank) 3-hydroxyacyl-CoA dehydrogenase PaaC K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:mmee00627] D NLK58_13715 NAD(P)/FAD-dependent oxidoreductase K10215 ethA; monooxygenase [EC:1.14.13.-] D NLK58_05490 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_14340 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_19410 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_01690 yccX; (GenBank) acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D NLK58_17960 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:mmee00364] D NLK58_15015 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D NLK58_15020 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D NLK58_15025 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D NLK58_15030 benD; (GenBank) benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D NLK58_15010 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D NLK58_15000 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:mmee00625] D NLK58_07535 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D NLK58_17835 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D NLK58_00930 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D NLK58_14865 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D NLK58_14480 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D NLK58_10495 PQQ-dependent methanol/ethanol family dehydrogenase K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D NLK58_13895 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:mmee00361] D NLK58_07535 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D NLK58_17835 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D NLK58_15010 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D NLK58_15000 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D NLK58_13895 haloacid dehalogenase type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00623 Toluene degradation [PATH:mmee00623] D NLK58_15010 catA; (GenBank) catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D NLK58_15000 muconate/chloromuconate family cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00622 Xylene degradation [PATH:mmee00622] D NLK58_15015 Rieske 2Fe-2S domain-containing protein K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D NLK58_15020 benB; (GenBank) benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D NLK58_15025 benC; (GenBank) benzoate 1,2-dioxygenase electron transfer component BenC K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D NLK58_15030 benD; (GenBank) benzoate diol dehydrogenase BenD K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] C 00633 Nitrotoluene degradation [PATH:mmee00633] D NLK58_14855 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation D NLK58_01480 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:mmee00643] D NLK58_05490 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_14340 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_19410 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4] D NLK58_14985 CoA transferase subunit A K01039 gctA; glutaconate CoA-transferase, subunit A [EC:2.8.3.12] D NLK58_14980 CoA-transferase subunit beta K01040 gctB; glutaconate CoA-transferase, subunit B [EC:2.8.3.12] C 00791 Atrazine degradation [PATH:mmee00791] D NLK58_08570 atzF; (GenBank) allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D NLK58_10460 uca; (GenBank) urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D NLK58_08525 ureC; (GenBank) urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D NLK58_08530 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D NLK58_08535 ureA; (GenBank) urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:mmee00930] D NLK58_07180 alkane 1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D NLK58_01475 fadB; (GenBank) fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D NLK58_20395 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:mmee00626] D NLK58_00930 iron-containing alcohol dehydrogenase K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D NLK58_14865 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:mmee00984] D NLK58_16995 CoA transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D NLK58_19935 CoA transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D NLK58_01480 fadA; (GenBank) acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:mmee03020] D NLK58_16185 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NLK58_16190 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NLK58_16345 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NLK58_15785 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D NLK58_13005 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:mmee03010] D NLK58_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_16085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_17560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_16100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NLK58_17575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NLK58_00025 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NLK58_16105 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NLK58_17580 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NLK58_00815 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D NLK58_20080 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NLK58_16250 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NLK58_16340 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NLK58_16305 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NLK58_17995 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NLK58_16200 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NLK58_16290 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NLK58_17620 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NLK58_16215 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NLK58_16335 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NLK58_16195 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NLK58_16330 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NLK58_16285 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NLK58_10165 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NLK58_18355 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NLK58_16265 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NLK58_18000 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NLK58_16240 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NLK58_17415 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NLK58_15905 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NLK58_16170 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NLK58_16235 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NLK58_16220 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NLK58_16225 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NLK58_16280 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NLK58_16295 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NLK58_18010 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NLK58_16175 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NLK58_16165 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NLK58_16180 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NLK58_17615 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NLK58_16270 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NLK58_16315 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NLK58_16255 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NLK58_16350 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NLK58_16300 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NLK58_18370 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NLK58_19700 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NLK58_17395 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NLK58_16245 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NLK58_16230 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NLK58_16275 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NLK58_18095 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D NLK58_17400 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NLK58_11215 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NLK58_16260 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NLK58_16310 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NLK58_16775 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NLK58_04835 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NLK58_11220 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NLK58_13090 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NLK58_19695 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NLK58_16325 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 C 00970 Aminoacyl-tRNA biosynthesis [PATH:mmee00970] D NLK58_00015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NLK58_04945 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NLK58_16095 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NLK58_17570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NLK58_00400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_00405 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_04675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_15270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_20275 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_00840 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NLK58_00900 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NLK58_05550 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NLK58_19610 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NLK58_01770 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NLK58_18105 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NLK58_01420 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NLK58_04940 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NLK58_01445 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NLK58_01765 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NLK58_12545 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NLK58_16135 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NLK58_04670 tRNA-His K14226 tRNA-His; tRNA His D NLK58_00010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NLK58_16090 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NLK58_17565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NLK58_01300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_02720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_04665 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_10195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_17980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_03865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NLK58_03870 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NLK58_05530 tRNA-Met K14230 tRNA-Met; tRNA Met D NLK58_15890 tRNA-Ile K14230 tRNA-Met; tRNA Met D NLK58_18080 tRNA-Met K14230 tRNA-Met; tRNA Met D NLK58_20155 tRNA-Met K14230 tRNA-Met; tRNA Met D NLK58_09910 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NLK58_04680 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NLK58_12950 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NLK58_19885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NLK58_00395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NLK58_01680 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NLK58_02905 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NLK58_16125 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NLK58_16140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NLK58_16150 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NLK58_16130 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NLK58_03790 tRNA-Val K14237 tRNA-Val; tRNA Val D NLK58_05545 tRNA-Val K14237 tRNA-Val; tRNA Val D NLK58_05555 tRNA-Val K14237 tRNA-Val; tRNA Val D NLK58_04950 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NLK58_06665 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NLK58_06670 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NLK58_06660 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NLK58_04700 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NLK58_00380 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NLK58_03925 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NLK58_12935 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NLK58_12940 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NLK58_19685 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NLK58_03060 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NLK58_04695 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NLK58_00255 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NLK58_12920 fmt; (GenBank) methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D NLK58_00350 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NLK58_06735 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NLK58_17430 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NLK58_18405 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NLK58_16760 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NLK58_04045 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NLK58_01380 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NLK58_19705 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NLK58_19710 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NLK58_16080 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NLK58_01545 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:mmee03008] D NLK58_18485 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NLK58_06895 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D NLK58_18855 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:mmee03060] D NLK58_16320 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NLK58_16155 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NLK58_10200 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NLK58_01320 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NLK58_01325 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NLK58_01315 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NLK58_13105 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NLK58_17765 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NLK58_09840 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NLK58_18350 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NLK58_14125 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NLK58_10610 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NLK58_10615 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NLK58_10620 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D NLK58_18475 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NLK58_17435 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum [PATH:mmee04141] D NLK58_00960 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NLK58_12870 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:mmee04122] D NLK58_01350 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NLK58_12455 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D NLK58_03850 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D NLK58_04265 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D NLK58_15040 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D NLK58_02925 tusB; (GenBank) sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D NLK58_02920 DsrE family protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D NLK58_02915 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D NLK58_02930 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D NLK58_04180 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NLK58_15410 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D NLK58_08900 moaA; (GenBank) GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D NLK58_15415 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein D NLK58_18140 molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D NLK58_17780 moaC; (GenBank) cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D NLK58_15425 moaB; (GenBank) molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D NLK58_11650 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NLK58_10990 thiS; (GenBank) sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:mmee03018] D NLK58_16730 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D NLK58_04865 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D NLK58_04250 DEAD/DEAH box helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D NLK58_00165 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_04525 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_10160 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NLK58_13730 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NLK58_13905 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] D NLK58_17985 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NLK58_17830 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NLK58_02605 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NLK58_15430 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho D NLK58_10260 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NLK58_05620 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NLK58_06860 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D NLK58_11270 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NLK58_09355 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D NLK58_15950 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:mmee03030] D NLK58_00065 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_02990 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_14505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_00140 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NLK58_03395 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NLK58_03200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NLK58_06745 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NLK58_00355 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NLK58_13080 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NLK58_18015 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NLK58_15900 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NLK58_16365 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NLK58_02995 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NLK58_20150 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NLK58_15735 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NLK58_01585 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:mmee03410] D NLK58_00220 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NLK58_09900 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NLK58_14110 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NLK58_12235 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D NLK58_02875 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D NLK58_15760 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D NLK58_15735 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NLK58_18395 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NLK58_01585 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:mmee03420] D NLK58_05050 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NLK58_16355 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NLK58_00850 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NLK58_01735 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NLK58_11635 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NLK58_11685 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NLK58_15735 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NLK58_01585 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NLK58_13005 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] C 03430 Mismatch repair [PATH:mmee03430] D NLK58_19560 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NLK58_06870 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D NLK58_11635 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NLK58_11685 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NLK58_05890 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D NLK58_04020 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NLK58_17800 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NLK58_18395 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NLK58_16365 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NLK58_00140 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NLK58_13080 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NLK58_03395 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NLK58_06745 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NLK58_03200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NLK58_00065 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_02990 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_14505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_00355 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NLK58_01585 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:mmee03440] D NLK58_18395 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NLK58_16365 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NLK58_13070 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NLK58_18495 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D NLK58_03385 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR D NLK58_19570 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA D NLK58_15735 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NLK58_03915 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NLK58_03910 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NLK58_03920 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NLK58_15810 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NLK58_13035 recB; (GenBank) exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D NLK58_13020 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D NLK58_13040 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D NLK58_00140 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NLK58_13080 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NLK58_03395 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NLK58_06745 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NLK58_03200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NLK58_00065 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_02990 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_14505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_00355 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NLK58_16770 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:mmee03250] D NLK58_01605 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:mmee02010] D NLK58_15115 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein D NLK58_15125 ABC transporter permease K05773 tupB; tungstate transport system permease protein D NLK58_15120 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D NLK58_12115 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NLK58_19365 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NLK58_12120 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NLK58_19370 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NLK58_12125 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NLK58_19375 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NLK58_17160 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D NLK58_17165 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D NLK58_17170 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D NLK58_11125 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D NLK58_11130 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D NLK58_11135 modC; (GenBank) molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D NLK58_01190 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D NLK58_01185 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D NLK58_18310 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D NLK58_11090 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D NLK58_11095 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D NLK58_11100 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D NLK58_18695 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D NLK58_18700 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D NLK58_18710 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D NLK58_18705 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D NLK58_07760 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NLK58_11590 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NLK58_07745 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D NLK58_07750 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D NLK58_07755 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D NLK58_06545 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D NLK58_01750 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NLK58_06550 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NLK58_01760 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NLK58_06555 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NLK58_06540 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D NLK58_01755 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NLK58_06560 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NLK58_11605 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D NLK58_11600 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D NLK58_11595 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D NLK58_04530 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D NLK58_04545 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein D NLK58_04540 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein D NLK58_04555 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D NLK58_04550 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D NLK58_10965 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NLK58_11530 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NLK58_11525 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D NLK58_11520 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NLK58_11515 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NLK58_02645 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D NLK58_16915 phnD; (GenBank) phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D NLK58_02655 ABC transporter permease K02042 phnE; phosphonate transport system permease protein D NLK58_16920 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D NLK58_02650 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D NLK58_16910 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D NLK58_08735 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein D NLK58_08740 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein D NLK58_08745 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D NLK58_04730 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D NLK58_04725 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D NLK58_04720 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D NLK58_04715 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D NLK58_10010 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D NLK58_10020 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D NLK58_10015 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D NLK58_10005 ABC transporter ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D NLK58_01925 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_04515 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_07725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_10115 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_13800 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_14960 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_15160 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_15165 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_17070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_19125 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_01930 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_07720 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_10120 livH; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D NLK58_13795 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_14955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_15155 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_17075 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_19130 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_01935 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_07715 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_10125 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D NLK58_13790 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_14950 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_15150 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_17080 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_19135 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_01940 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_07710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_10130 livG; (GenBank) high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_13810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_14945 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_15145 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_17060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_19115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_01945 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_07700 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_10135 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_13805 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_14940 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_15140 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_17065 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_19120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_14365 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D NLK58_14360 ABC transporter permease K02072 metI; D-methionine transport system permease protein D NLK58_14355 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D NLK58_08565 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D NLK58_08560 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D NLK58_08555 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D NLK58_08550 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D NLK58_08545 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D NLK58_03015 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D NLK58_03020 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D NLK58_03025 ABC transporter permease K13895 yejE; microcin C transport system permease protein D NLK58_03030 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D NLK58_04955 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D NLK58_13975 znuB; (GenBank) zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D NLK58_13980 znuC; (GenBank) zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D NLK58_06175 chain-length determining protein K10107 kpsE; capsular polysaccharide transport system permease protein D NLK58_06185 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D NLK58_06180 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D NLK58_04105 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein D NLK58_04100 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NLK58_05175 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D D NLK58_05180 heme ABC transporter permease K02195 ccmC; heme exporter protein C D NLK58_05185 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B D NLK58_05190 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D NLK58_00365 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D NLK58_00370 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D NLK58_06585 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NLK58_08910 ABC transporter permease K19341 nosY; Cu-processing system permease protein D NLK58_08915 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D NLK58_14135 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NLK58_14130 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NLK58_04075 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D NLK58_13045 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D NLK58_02735 cydC; (GenBank) thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D NLK58_02730 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:mmee02060] D NLK58_00725 PfkB family carbohydrate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D NLK58_16735 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D NLK58_06610 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D NLK58_06600 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:mmee03070] D NLK58_16680 TolC family outer membrane protein K12340 tolC; outer membrane protein D NLK58_05605 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D NLK58_01985 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C D NLK58_05610 PDZ domain-containing protein K02452 gspC; general secretion pathway protein C D NLK58_01995 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D NLK58_02000 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D NLK58_02005 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H D NLK58_02010 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D NLK58_02015 gspJ; (GenBank) type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D NLK58_02020 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D NLK58_02025 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D NLK58_02030 type II secretion system protein M K02462 gspM; general secretion pathway protein M D NLK58_00120 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NLK58_01990 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NLK58_01320 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NLK58_01325 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NLK58_16155 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NLK58_10200 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NLK58_16320 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NLK58_01315 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NLK58_13105 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NLK58_17765 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NLK58_14125 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NLK58_09840 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NLK58_18350 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NLK58_10610 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NLK58_10615 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NLK58_10620 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D NLK58_14260 vgrG; (GenBank) type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D NLK58_19065 vgrG; (GenBank) type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D NLK58_19990 vgrG; (GenBank) type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D NLK58_14290 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D NLK58_14220 tssJ; (GenBank) type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D NLK58_14255 tssM; (GenBank) type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D NLK58_14230 icmH; (GenBank) type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK D NLK58_14235 tssH; (GenBank) type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:mmee02020] D NLK58_11370 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NLK58_11365 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NLK58_07160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_07165 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_11415 alkaline phosphatase D family protein K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D NLK58_10965 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NLK58_11530 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NLK58_07260 HAMP domain-containing histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D NLK58_07265 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR D NLK58_18300 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D NLK58_18295 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D NLK58_18460 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D NLK58_09220 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system D NLK58_12410 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system D NLK58_09215 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D NLK58_12415 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D NLK58_09210 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D NLK58_12420 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D NLK58_14625 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D NLK58_14630 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D NLK58_05705 flagellin domain-containing protein K02406 fliC; flagellin D NLK58_05715 flagellin K02406 fliC; flagellin D NLK58_05295 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D NLK58_05270 flagellar motor protein K02556 motA; chemotaxis protein MotA D NLK58_06910 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NLK58_12885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_14825 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_07500 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D NLK58_07505 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D NLK58_07510 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D NLK58_12800 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NLK58_13085 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NLK58_15470 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D NLK58_15465 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D NLK58_08980 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D NLK58_08985 narL; (GenBank) two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D NLK58_08970 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D NLK58_08965 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D NLK58_08955 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D NLK58_08960 narJ; (GenBank) nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D NLK58_18505 ATP-binding protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D NLK58_01730 uvrY; (GenBank) UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D NLK58_00390 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator D NLK58_15560 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D NLK58_19300 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D NLK58_20070 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D NLK58_03955 DUF3240 family protein K04751 glnB; nitrogen regulatory protein P-II 1 D NLK58_16515 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D NLK58_16460 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NLK58_18600 HDOD domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NLK58_16455 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D NLK58_10480 glnT; (GenBank) type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_16470 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_19170 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_15955 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D NLK58_15170 sigma-54 dependent transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_18200 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NLK58_18205 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D NLK58_17495 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D NLK58_17490 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D NLK58_06590 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NLK58_06335 pilin K02650 pilA; type IV pilus assembly protein PilA D NLK58_06420 pilin K02650 pilA; type IV pilus assembly protein PilA D NLK58_01635 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NLK58_12995 PAS domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D NLK58_00340 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_00415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_01780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_02125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_02615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_07155 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_07400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_08215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_08845 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_14425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_18210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_19485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_20215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_10935 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D NLK58_05250 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NLK58_05255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NLK58_05280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NLK58_05290 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NLK58_05275 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NLK58_01630 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NLK58_10325 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NLK58_14005 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK D NLK58_14010 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D NLK58_14015 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D NLK58_14000 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D NLK58_14025 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D NLK58_14020 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D NLK58_13995 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D NLK58_13990 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC D NLK58_07125 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_07595 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_09995 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_10855 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_12725 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_19450 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_07600 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D NLK58_08285 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D NLK58_09990 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein D NLK58_10860 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein D NLK58_12720 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein D NLK58_17120 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein D NLK58_19455 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D NLK58_07605 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_08280 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein D NLK58_09985 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_10865 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_12715 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_17125 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_19460 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein D NLK58_19595 response regulator K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NLK58_19590 fixJ; (GenBank) response regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NLK58_05430 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D NLK58_05425 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D NLK58_05420 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NLK58_11140 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NLK58_17625 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D NLK58_17630 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NLK58_17635 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D NLK58_04285 ccoN; (GenBank) cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D NLK58_04290 ccoO; (GenBank) cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D NLK58_04295 cbb3-type cytochrome c oxidase subunit 3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D NLK58_04300 ccoP; (GenBank) cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D NLK58_16680 TolC family outer membrane protein K12340 tolC; outer membrane protein D NLK58_03675 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D NLK58_04055 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D NLK58_04215 ATP-binding protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D NLK58_02045 ATP-binding protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D NLK58_10550 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D NLK58_05375 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D NLK58_05380 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D NLK58_05385 STAS domain-containing protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D NLK58_01620 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D NLK58_11825 D NLK58_12640 C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome [PATH:mmee04142] D NLK58_03510 hypothetical protein K01201 GBA; glucosylceramidase [EC:3.2.1.45] D NLK58_10845 protein O-GlcNAcase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04146 Peroxisome [PATH:mmee04146] D NLK58_16995 CoA transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D NLK58_19935 CoA transferase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D NLK58_01175 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_03295 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_07365 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_18575 nudC; (GenBank) NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D NLK58_19465 malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D NLK58_01980 FAD-binding oxidoreductase K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] D NLK58_18610 fatty acyl-CoA reductase K13356 FAR; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] D NLK58_12700 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D NLK58_19315 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D NLK58_05585 sodB; (GenBank) superoxide dismutase [Fe] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:mmee04148] D NLK58_12765 type III PLP-dependent enzyme K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D NLK58_17625 petA; (GenBank) ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:mmee02024] D NLK58_06860 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D NLK58_11055 trpE; (GenBank) anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D NLK58_11060 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D NLK58_03050 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NLK58_10895 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D NLK58_14625 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D NLK58_14630 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D NLK58_11305 panP; (GenBank) putative pyridoxal-dependent aspartate 1-decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D NLK58_01925 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_04515 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_07725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_10115 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_13800 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_14960 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_15160 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_15165 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_17070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_19125 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_01930 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_07720 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_10120 livH; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D NLK58_13795 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_14955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_15155 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_17075 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_19130 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_01935 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_07715 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_10125 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D NLK58_13790 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_14950 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_15150 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_17080 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_19135 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_01940 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_07710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_10130 livG; (GenBank) high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_13810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_14945 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_15145 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_17060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_19115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_01945 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_07700 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_10135 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_13805 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_14940 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_15140 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_17065 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_19120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_01175 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_03295 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_07365 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_11140 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NLK58_13985 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D NLK58_17785 ribA; (GenBank) GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D NLK58_17330 ribD; (GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D NLK58_13105 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NLK58_06990 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D NLK58_16155 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NLK58_10200 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NLK58_16320 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NLK58_01315 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NLK58_17765 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NLK58_14125 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NLK58_09840 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NLK58_18350 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:mmee02030] D NLK58_00340 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_00415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_01780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_02125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_02615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_07155 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_07400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_08215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_08845 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_14425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_18210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_19485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_20215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_10935 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D NLK58_05280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NLK58_05250 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NLK58_05255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NLK58_05290 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NLK58_05285 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D NLK58_05275 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NLK58_12995 PAS domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D NLK58_01630 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NLK58_10325 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NLK58_01635 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NLK58_05405 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NLK58_05360 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D NLK58_05355 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NLK58_05270 flagellar motor protein K02556 motA; chemotaxis protein MotA D NLK58_06910 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NLK58_12885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_14825 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_05265 motD; (GenBank) flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D NLK58_06905 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NLK58_12880 OmpA family protein K02557 motB; chemotaxis protein MotB D NLK58_14820 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NLK58_12640 C 02040 Flagellar assembly [PATH:mmee02040] D NLK58_05415 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D NLK58_05410 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NLK58_05405 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NLK58_05400 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D NLK58_05395 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NLK58_05390 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D NLK58_05370 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D NLK58_05365 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NLK58_15365 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NLK58_05360 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D NLK58_05355 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NLK58_05350 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NLK58_05345 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NLK58_05340 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NLK58_05335 fliR; (GenBank) flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NLK58_05310 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NLK58_05330 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D NLK58_01625 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D NLK58_01245 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D NLK58_01250 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D NLK58_01255 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D NLK58_01260 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D NLK58_01265 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D NLK58_01270 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NLK58_01275 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NLK58_01280 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D NLK58_01285 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D NLK58_01290 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D NLK58_01295 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D NLK58_09810 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D NLK58_20325 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D NLK58_05705 flagellin domain-containing protein K02406 fliC; flagellin D NLK58_05715 flagellin K02406 fliC; flagellin D NLK58_05695 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D NLK58_05690 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D NLK58_05435 SOS cell division inhibitor K02423 fliT; flagellar protein FliT D NLK58_05270 flagellar motor protein K02556 motA; chemotaxis protein MotA D NLK58_06910 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NLK58_12885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_14825 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_05265 motD; (GenBank) flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D NLK58_06905 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NLK58_12880 OmpA family protein K02557 motB; chemotaxis protein MotB D NLK58_14820 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NLK58_01620 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D NLK58_01615 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D NLK58_15895 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NLK58_05430 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D NLK58_06590 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NLK58_05420 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NLK58_05295 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D NLK58_00165 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_04525 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:mmee04981] D NLK58_10670 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D NLK58_17825 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D NLK58_17320 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D NLK58_17820 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D NLK58_02950 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism [PATH:mmee04980] D NLK58_20470 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D NLK58_20460 meaB; (GenBank) methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D NLK58_02950 metH; (GenBank) methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation D NLK58_03510 hypothetical protein K01201 GBA; glucosylceramidase [EC:3.2.1.45] B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:mmee01501] D NLK58_05655 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D NLK58_10910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_13155 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_14760 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_10915 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_13160 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_14765 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_16680 TolC family outer membrane protein K12340 tolC; outer membrane protein D NLK58_16785 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NLK58_17905 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NLK58_17690 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:mmee01502] D NLK58_17730 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NLK58_18020 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NLK58_17700 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D NLK58_17705 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NLK58_17720 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:mmee01503] D NLK58_01070 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D NLK58_07260 HAMP domain-containing histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D NLK58_07265 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR D NLK58_06875 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NLK58_18460 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D NLK58_11230 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D NLK58_01605 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NLK58_10910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_13155 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_14760 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_10915 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_13160 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_14765 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_16680 TolC family outer membrane protein K12340 tolC; outer membrane protein D NLK58_20140 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:mmee01000] C 01001 Protein kinases [BR:mmee01001] D NLK58_18855 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D NLK58_19005 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D NLK58_05645 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_06025 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_06305 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_15220 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_19205 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_03665 polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D NLK58_11370 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NLK58_18300 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D NLK58_07260 HAMP domain-containing histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D NLK58_14625 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D NLK58_02140 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D NLK58_08980 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D NLK58_18505 ATP-binding protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D NLK58_15560 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D NLK58_07515 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D NLK58_15470 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D NLK58_16460 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NLK58_18600 HDOD domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NLK58_17495 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D NLK58_18200 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NLK58_05280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NLK58_14000 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D NLK58_19595 response regulator K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NLK58_05425 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D NLK58_04215 ATP-binding protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D NLK58_02045 ATP-binding protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D NLK58_10550 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:mmee01009] D NLK58_08725 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NLK58_00960 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NLK58_19010 Stp1/IreP family PP2C-type Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D NLK58_06945 serB; (GenBank) phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:mmee01002] D NLK58_17435 lspA; (GenBank) signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D NLK58_06435 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NLK58_08025 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D NLK58_04010 guaA; (GenBank) glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NLK58_19020 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D NLK58_05465 type 1 glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D NLK58_18905 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D NLK58_03085 purF; (GenBank) amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D NLK58_16830 gltB; (GenBank) glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D NLK58_13240 glmS; (GenBank) glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D NLK58_03465 asnB; (GenBank) asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D NLK58_18920 DJ-1/PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124] D NLK58_11810 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70] D NLK58_12580 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D NLK58_18890 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D NLK58_19655 pepN; (GenBank) aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D NLK58_12860 prlC; (GenBank) oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D NLK58_04910 insulinase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-] D NLK58_00360 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D NLK58_20050 dapE; (GenBank) succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D NLK58_20075 map; (GenBank) type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D NLK58_10645 pepP; (GenBank) Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D NLK58_00765 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NLK58_10225 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NLK58_04240 htpX; (GenBank) protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D NLK58_03855 M48 family metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D NLK58_20115 rseP; (GenBank) RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D NLK58_18840 zinc-dependent peptidase K09933 mtfA; MtfA peptidase D NLK58_18460 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D NLK58_06990 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D NLK58_17920 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NLK58_11395 pbpG; (GenBank) D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D NLK58_18745 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NLK58_04655 clpP; (GenBank) ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D NLK58_04645 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NLK58_10095 lon; (GenBank) endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D NLK58_05455 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NLK58_18475 lepB; (GenBank) signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D NLK58_16485 pip; (GenBank) prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D NLK58_09860 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NLK58_20390 carboxy terminal-processing peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D NLK58_04850 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D NLK58_02975 sohB; (GenBank) protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D NLK58_19640 rhomboid family intramembrane serine protease K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D NLK58_16750 hslV; (GenBank) ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D NLK58_00775 ggt; (GenBank) gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D NLK58_09765 yegQ; (GenBank) tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-] D NLK58_09165 U32 family peptidase K24845 ubiV; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15] D NLK58_09170 U32 family peptidase K24844 ubiU; 2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15] D NLK58_06845 hflC; (GenBank) protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D NLK58_06850 hflK; (GenBank) FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:mmee01003] D NLK58_08635 glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D NLK58_02585 glgA; (GenBank) glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D NLK58_08125 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_15995 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D NLK58_16785 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NLK58_17715 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_17910 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_16615 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D NLK58_03745 mdoH; (GenBank) glucans biosynthesis glucosyltransferase MdoH K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D NLK58_03810 hypothetical protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D NLK58_19970 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:mmee01005] D NLK58_20140 lpxA; (GenBank) acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D NLK58_20145 lpxB; (GenBank) lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D NLK58_17750 lpxC; (GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D NLK58_20130 lpxD; (GenBank) UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D NLK58_04710 lpxH; (GenBank) UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D NLK58_04070 lpxK; (GenBank) tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D NLK58_16670 lpxL; (GenBank) LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D NLK58_16675 waaA; (GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D NLK58_01070 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D NLK58_16585 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166] D NLK58_00160 kdsA; (GenBank) 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D NLK58_04060 kdsB; (GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D NLK58_06570 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D NLK58_06565 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D NLK58_16580 glycosyltransferase family 9 protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-] D NLK58_17650 SIS domain-containing protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D NLK58_12945 gmhB; (GenBank) D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D NLK58_02335 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D NLK58_14640 glycosyltransferase family 2 protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D NLK58_06205 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:mmee01011] D NLK58_06530 murA; (GenBank) UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D NLK58_04050 murB; (GenBank) UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D NLK58_17725 murC; (GenBank) UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D NLK58_17710 murD; (GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D NLK58_17695 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D NLK58_17730 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D NLK58_18020 alr; (GenBank) alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D NLK58_18580 murI; (GenBank) glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D NLK58_17705 mraY; (GenBank) phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D NLK58_17720 murG; (GenBank) undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D NLK58_11625 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D NLK58_18265 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D NLK58_17420 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NLK58_16785 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D NLK58_15995 mrcB; (GenBank) penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D NLK58_17905 mrdA; (GenBank) penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D NLK58_17690 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NLK58_17920 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D NLK58_18745 dacB; (GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D NLK58_11395 pbpG; (GenBank) D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D NLK58_08125 mtgA; (GenBank) monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_17715 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_17910 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_12580 L,D-transpeptidase family protein K16291 erfK; L,D-transpeptidase ErfK/SrfK D NLK58_18905 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D NLK58_11810 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70] D NLK58_11380 lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D NLK58_03010 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D NLK58_20420 mltF; (GenBank) membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D NLK58_04800 mltG; (GenBank) endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D NLK58_17915 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D NLK58_06875 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NLK58_00330 ampD; (GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:mmee01004] D NLK58_04825 fabD; (GenBank) ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D NLK58_02100 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NLK58_08220 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D NLK58_09755 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NLK58_18040 fabB; (GenBank) beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D NLK58_04810 fabF; (GenBank) beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D NLK58_04820 fabG; (GenBank) 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_05540 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_05635 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D NLK58_09750 fabA; (GenBank) bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D NLK58_20135 fabZ; (GenBank) 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D NLK58_03035 enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D NLK58_00910 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D NLK58_11335 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D NLK58_11535 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D NLK58_02835 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D NLK58_14115 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D NLK58_08870 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D NLK58_19300 fatty acid desaturase K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45] D NLK58_18615 acs; (GenBank) acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_19100 AMP-binding protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D NLK58_04025 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D NLK58_12705 acetoacetate--CoA ligase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D NLK58_07050 long-chain-acyl-CoA synthetase K13776 atuH; citronellyl-CoA synthetase [EC:6.2.1.-] D NLK58_01175 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_03295 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_07365 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_16975 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D NLK58_19305 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D NLK58_18570 plsB; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D NLK58_04830 plsX; (GenBank) phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D NLK58_15915 plsY; (GenBank) glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D NLK58_11450 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D NLK58_11805 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:mmee01006] D NLK58_17795 polyprenyl synthetase family protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D NLK58_17390 ispB; (GenBank) octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D NLK58_20100 uppS; (GenBank) polyprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D NLK58_06865 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NLK58_13835 prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D NLK58_11360 ubiA; (GenBank) 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D NLK58_12795 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:mmee01007] D NLK58_04950 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NLK58_04700 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NLK58_15970 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D NLK58_16080 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NLK58_01545 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NLK58_04695 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NLK58_16760 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NLK58_00255 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NLK58_17430 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NLK58_00350 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NLK58_06735 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NLK58_18405 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NLK58_03925 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NLK58_01380 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NLK58_12935 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NLK58_12940 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NLK58_03060 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NLK58_04045 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NLK58_19685 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NLK58_00380 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NLK58_19705 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NLK58_19710 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NLK58_00845 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_10970 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D NLK58_00275 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D NLK58_04230 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D NLK58_20065 dapC; (GenBank) succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D NLK58_00800 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_06515 hisC; (GenBank) histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D NLK58_06790 bioF; (GenBank) 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D NLK58_13845 PatB family C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D NLK58_10065 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D NLK58_13055 gabT; (GenBank) 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D NLK58_12250 ectB; (GenBank) diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D NLK58_08765 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D NLK58_01815 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NLK58_16025 hemL; (GenBank) glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D NLK58_16555 branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D NLK58_00790 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_09010 serC; (GenBank) 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D NLK58_16625 rffA; (GenBank) dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:mmee00194] D NLK58_13230 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NLK58_14720 ATPase K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D NLK58_13225 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NLK58_14715 atpD; (GenBank) F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D NLK58_13220 atpG; (GenBank) F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NLK58_14755 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D NLK58_13215 atpA; (GenBank) F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D NLK58_13210 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D NLK58_13205 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NLK58_14745 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D NLK58_13200 atpE; (GenBank) F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NLK58_14740 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D NLK58_13195 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NLK58_14735 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NLK58_13190 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I D NLK58_14725 AtpZ/AtpI family protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:mmee03000] D NLK58_08500 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NLK58_19035 AraC family transcriptional regulator K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D NLK58_07820 helix-turn-helix transcriptional regulator K07506 K07506; AraC family transcriptional regulator D NLK58_10475 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NLK58_18670 GlxA family transcriptional regulator K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator D NLK58_07965 GlxA family transcriptional regulator K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator D NLK58_13780 LysR substrate-binding domain-containing protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D NLK58_16710 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D NLK58_01650 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D NLK58_02080 LysR family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D NLK58_15805 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D NLK58_18895 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D NLK58_03245 cysB; (GenBank) HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D NLK58_14995 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes D NLK58_16930 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D NLK58_04570 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D NLK58_17175 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D NLK58_10000 FCD domain-containing protein K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator D NLK58_13640 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D NLK58_10470 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D NLK58_10980 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D NLK58_14860 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D NLK58_03930 fabR; (GenBank) HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D NLK58_08860 TetR family transcriptional regulator K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D NLK58_07010 TetR/AcrR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D NLK58_04040 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NLK58_07635 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NLK58_08360 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NLK58_06480 LuxR C-terminal-related transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D NLK58_12595 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D NLK58_04220 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D NLK58_12395 merR; (GenBank) Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D NLK58_12425 merR; (GenBank) Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D NLK58_12375 MerR family DNA-binding protein K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D NLK58_13930 MerR family DNA-binding protein K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D NLK58_10275 fur; (GenBank) ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D NLK58_13985 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D NLK58_14990 helix-turn-helix domain-containing protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D NLK58_11140 crp; (GenBank) cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D NLK58_18035 fnr; (GenBank) fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D NLK58_08945 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D NLK58_01345 iscR; (GenBank) Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D NLK58_08880 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D NLK58_11575 metalloregulator ArsR/SmtB family transcription factor K23988 arsR-arsC; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor / arsenate reductase (thioredoxin) [EC:1.20.4.4] D NLK58_09455 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator D NLK58_04630 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D NLK58_16110 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D NLK58_10740 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D NLK58_06300 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D NLK58_03985 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D NLK58_08380 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D NLK58_05430 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D NLK58_04560 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D NLK58_09075 norR; (GenBank) nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D NLK58_05805 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D NLK58_07450 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D NLK58_11975 helix-turn-helix domain-containing protein K07726 K07726; putative transcriptional regulator D NLK58_15190 DNA-binding transcriptional regulator K07726 K07726; putative transcriptional regulator D NLK58_07625 putA; (GenBank) bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D NLK58_08930 NosR/NirI family protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D NLK58_12530 NosR/NirI family protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D NLK58_20200 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D NLK58_13185 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NLK58_06280 rfaH; (GenBank) transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D NLK58_07730 paaX; (GenBank) phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D NLK58_14050 pyrR; (GenBank) bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D NLK58_19880 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D NLK58_14040 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D NLK58_15975 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NLK58_17325 nrdR; (GenBank) transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D NLK58_17675 mraZ; (GenBank) division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:mmee03021] D NLK58_13005 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D NLK58_16345 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NLK58_16185 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NLK58_16190 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NLK58_15785 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NLK58_15895 rpoD; (GenBank) RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D NLK58_00210 rpoS; (GenBank) RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D NLK58_02420 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D NLK58_15625 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D NLK58_18440 rpoE; (GenBank) RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D NLK58_14140 rpoH; (GenBank) RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D NLK58_06590 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D NLK58_05295 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D NLK58_11470 rapA; (GenBank) RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D NLK58_10185 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NLK58_17345 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NLK58_16160 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NLK58_17640 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D NLK58_17645 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B D NLK58_18445 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA D NLK58_18450 MucB/RseB C-terminal domain-containing protein K03598 rseB; sigma-E factor negative regulatory protein RseB D NLK58_18455 SoxR reducing system RseC family protein K03803 rseC; sigma-E factor negative regulatory protein RseC D NLK58_15975 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NLK58_10235 greA; (GenBank) transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D NLK58_14170 greB; (GenBank) transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D NLK58_15430 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:mmee03019] D NLK58_04865 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D NLK58_06635 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D NLK58_18485 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NLK58_13905 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] D NLK58_17985 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NLK58_06895 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D NLK58_04250 DEAD/DEAH box helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D NLK58_13730 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D NLK58_17830 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NLK58_02605 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NLK58_00165 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_04525 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_10160 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NLK58_15430 rho; (GenBank) transcription termination factor Rho K03628 rho; transcription termination factor Rho D NLK58_10260 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NLK58_05620 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NLK58_06860 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D NLK58_11270 ppk1; (GenBank) polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D NLK58_09355 ppk2; (GenBank) polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D NLK58_15950 pcnB; (GenBank) polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D NLK58_16730 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D NLK58_00390 csrA; (GenBank) carbon storage regulator CsrA K03563 csrA; carbon storage regulator D NLK58_04895 rraA; (GenBank) ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D NLK58_06605 rapZ; (GenBank) RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D NLK58_03290 hrpA; (GenBank) ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D NLK58_12785 hrpB; (GenBank) ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:mmee03011] D NLK58_00815 rpsA; (GenBank) 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D NLK58_20080 rpsB; (GenBank) 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D NLK58_16250 rpsC; (GenBank) 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D NLK58_16340 rpsD; (GenBank) 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D NLK58_16305 rpsE; (GenBank) 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D NLK58_17995 rpsF; (GenBank) 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D NLK58_16200 rpsG; (GenBank) 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D NLK58_16290 rpsH; (GenBank) 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D NLK58_17620 rpsI; (GenBank) 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D NLK58_16215 rpsJ; (GenBank) 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D NLK58_16335 rpsK; (GenBank) 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D NLK58_16195 rpsL; (GenBank) 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D NLK58_16330 rpsM; (GenBank) 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D NLK58_16285 rpsN; (GenBank) 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D NLK58_10165 rpsO; (GenBank) 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D NLK58_18355 rpsP; (GenBank) 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D NLK58_16265 rpsQ; (GenBank) 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D NLK58_18000 rpsR; (GenBank) 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D NLK58_16240 rpsS; (GenBank) 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D NLK58_17415 rpsT; (GenBank) 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D NLK58_15905 rpsU; (GenBank) 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D NLK58_16170 rplA; (GenBank) 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D NLK58_16235 rplB; (GenBank) 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D NLK58_16220 rplC; (GenBank) 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D NLK58_16225 rplD; (GenBank) 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D NLK58_16280 rplE; (GenBank) 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D NLK58_16295 rplF; (GenBank) 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D NLK58_18010 rplI; (GenBank) 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D NLK58_16175 rplJ; (GenBank) 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D NLK58_16165 rplK; (GenBank) 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D NLK58_16180 rplL; (GenBank) 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D NLK58_17615 rplM; (GenBank) 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D NLK58_16270 rplN; (GenBank) 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D NLK58_16315 rplO; (GenBank) 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D NLK58_16255 rplP; (GenBank) 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D NLK58_16350 rplQ; (GenBank) 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D NLK58_16300 rplR; (GenBank) 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D NLK58_18370 rplS; (GenBank) 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D NLK58_19700 rplT; (GenBank) 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D NLK58_17395 rplU; (GenBank) 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D NLK58_16245 rplV; (GenBank) 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D NLK58_16230 rplW; (GenBank) 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D NLK58_16275 rplX; (GenBank) 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D NLK58_17400 rpmA; (GenBank) 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D NLK58_11215 rpmB; (GenBank) 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D NLK58_16260 rpmC; (GenBank) 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D NLK58_16310 rpmD; (GenBank) 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D NLK58_16775 rpmE; (GenBank) 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D NLK58_04835 rpmF; (GenBank) 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D NLK58_11220 rpmG; (GenBank) 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D NLK58_13090 rpmH; (GenBank) 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D NLK58_19695 rpmI; (GenBank) 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D NLK58_16325 rpmJ; (GenBank) 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D NLK58_18095 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D NLK58_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_16085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_17560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_16100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NLK58_17575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NLK58_00025 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NLK58_16105 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NLK58_17580 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 03009 Ribosome biogenesis [BR:mmee03009] D NLK58_18485 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NLK58_18855 serine protein kinase RIO K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D NLK58_06895 orn; (GenBank) oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D NLK58_18490 era; (GenBank) GTPase Era K03595 era; GTPase D NLK58_17405 obgE; (GenBank) GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D NLK58_15975 dksA; (GenBank) RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D NLK58_10185 nusA; (GenBank) transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA D NLK58_17345 nusB; (GenBank) transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D NLK58_16160 nusG; (GenBank) transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D NLK58_07565 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D NLK58_11385 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D NLK58_11005 rsmA; (GenBank) 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D NLK58_12925 rsmB; (GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D NLK58_05095 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D NLK58_14120 rsmD; (GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D NLK58_08770 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D NLK58_13175 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NLK58_17680 rsmH; (GenBank) 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D NLK58_17665 rsmI; (GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D NLK58_18565 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D NLK58_02760 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D NLK58_17990 rlmB; (GenBank) 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D NLK58_13705 rlmE; (GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D NLK58_05090 methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D NLK58_17900 rlmH; (GenBank) 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D NLK58_16720 class I SAM-dependent rRNA methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D NLK58_07140 rlmJ; (GenBank) 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D NLK58_00880 rlmKL; (GenBank) bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D NLK58_01360 rlmN; (GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D NLK58_18515 rlmD; (GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D NLK58_15775 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NLK58_01560 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D NLK58_04860 rluC; (GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D NLK58_17510 rluD; (GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D NLK58_04170 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D NLK58_18975 rluF; (GenBank) 23S rRNA pseudouridine(2604) synthase RluF K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D NLK58_17600 rimI; (GenBank) ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D NLK58_18165 rimK; (GenBank) 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D NLK58_18360 rimM; (GenBank) ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D NLK58_06675 rimO; (GenBank) 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D NLK58_01015 OsmC domain/YcaO domain-containing protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D NLK58_10725 prmA; (GenBank) 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D NLK58_03175 prmB; (GenBank) 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D NLK58_04195 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D NLK58_04865 rne; (GenBank) ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D NLK58_06635 rng; (GenBank) ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D NLK58_14045 ruvX; (GenBank) Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D NLK58_00425 dbpA; (GenBank) ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D NLK58_17830 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D NLK58_06900 rsgA; (GenBank) small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D NLK58_01395 der; (GenBank) ribosome biogenesis GTPase Der K03977 engA; GTPase D NLK58_18045 ylqF; (GenBank) ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A D NLK58_06855 hflX; (GenBank) GTPase HflX K03665 hflX; GTPase D NLK58_12900 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NLK58_15790 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D NLK58_10175 rbfA; (GenBank) 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D NLK58_10190 rimP; (GenBank) ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D NLK58_17895 rsfS; (GenBank) ribosome silencing factor K09710 ybeB; ribosome-associated protein D NLK58_06715 ybeY; (GenBank) rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D NLK58_10230 yhbY; (GenBank) ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein D NLK58_06620 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D NLK58_00875 rmf; (GenBank) ribosome modulation factor K03812 rmf; ribosome modulation factor D NLK58_06595 hpf; (GenBank) ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor D NLK58_18085 ychF; (GenBank) redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D NLK58_04840 YceD family protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:mmee03016] D NLK58_08190 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D NLK58_09820 multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D NLK58_04950 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NLK58_04045 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D NLK58_17430 ileS; (GenBank) isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D NLK58_06735 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NLK58_00255 metG; (GenBank) methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D NLK58_04700 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D NLK58_16760 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NLK58_18405 lysS; (GenBank) lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D NLK58_03925 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NLK58_00380 alaS; (GenBank) alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D NLK58_19685 thrS; (GenBank) threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D NLK58_03060 serS; (GenBank) serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D NLK58_04695 cysS; (GenBank) cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D NLK58_00350 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D NLK58_01380 hisS; (GenBank) histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D NLK58_19705 pheS; (GenBank) phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D NLK58_19710 pheT; (GenBank) phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D NLK58_16080 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NLK58_01545 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D NLK58_16490 dtd; (GenBank) D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D NLK58_11505 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NLK58_15660 trmB; (GenBank) tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D NLK58_06450 tsaA; (GenBank) tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D NLK58_03125 truA; (GenBank) tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D NLK58_10170 truB; (GenBank) tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D NLK58_00185 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D NLK58_01350 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NLK58_12900 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D NLK58_06865 miaA; (GenBank) tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D NLK58_13110 mnmE; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D NLK58_13170 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NLK58_09020 selD; (GenBank) selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D NLK58_06285 cysQ; (GenBank) 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NLK58_06365 hypothetical protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D NLK58_13095 rnpA; (GenBank) ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D NLK58_17670 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component D NLK58_20315 rnt; (GenBank) ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D NLK58_15765 rph; (GenBank) ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D NLK58_03380 HRDC domain-containing protein K03684 rnd; ribonuclease D [EC:3.1.13.5] D NLK58_18950 thpR; (GenBank) RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D NLK58_16855 ettA; (GenBank) energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D NLK58_12935 glyQ; (GenBank) glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D NLK58_12940 glyS; (GenBank) glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D NLK58_15970 gluQRS; (GenBank) tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D NLK58_12695 ybaK; (GenBank) Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D NLK58_11495 YbaK/EbsC family protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D NLK58_03950 tadA; (GenBank) tRNA adenosine(34) deaminase TadA K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D NLK58_04975 dusA; (GenBank) tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D NLK58_10735 dusB; (GenBank) tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D NLK58_00975 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D NLK58_06705 miaB; (GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D NLK58_06825 cmoA; (GenBank) carboxy-S-adenosyl-L-methionine synthase CmoA K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D NLK58_06830 cmoB; (GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D NLK58_11700 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D NLK58_18365 trmD; (GenBank) tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D NLK58_01335 trmJ; (GenBank) tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D NLK58_09835 trmL; (GenBank) tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D NLK58_13695 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D NLK58_15775 RluA family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D NLK58_04180 mnmA; (GenBank) tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D NLK58_04330 ttcA; (GenBank) tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D NLK58_03850 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D NLK58_04265 tusA; (GenBank) sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D NLK58_15040 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D NLK58_02925 tusB; (GenBank) sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D NLK58_02920 DsrE family protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C D NLK58_02915 tusD; (GenBank) sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D NLK58_02930 TusE/DsrC/DsvC family sulfur relay protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D NLK58_18420 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D NLK58_04760 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D NLK58_01600 mnmC; (GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D NLK58_01305 queA; (GenBank) tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D NLK58_12625 queC; (GenBank) 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D NLK58_12620 queE; (GenBank) 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D NLK58_01225 queF; (GenBank) NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D NLK58_06890 queG; (GenBank) tRNA epoxyqueuosine(34) reductase QueG K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D NLK58_11485 mnmH; (GenBank) tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D NLK58_01310 tgt; (GenBank) tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D NLK58_11650 thiI; (GenBank) tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D NLK58_00150 tilS; (GenBank) tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D NLK58_11675 GNAT family N-acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D NLK58_18555 tsaB; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D NLK58_15910 tsaD; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D NLK58_06880 tsaE; (GenBank) tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D NLK58_15615 tcdA; (GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D NLK58_13905 VacB/RNase II family 3'-5' exoribonuclease K12573 rnr; ribonuclease R [EC:3.1.13.1] D NLK58_17985 rnr; (GenBank) ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D NLK58_10160 pnp; (GenBank) polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D NLK58_04005 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:mmee03012] D NLK58_07245 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D NLK58_12775 initiation factor 2B K03680 EIF2B4; translation initiation factor eIF-2B subunit delta D NLK58_10180 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NLK58_19690 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NLK58_15395 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D NLK58_20085 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts D NLK58_16145 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D NLK58_16210 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D NLK58_16205 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G D NLK58_18130 prfA; (GenBank) peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D NLK58_20095 frr; (GenBank) ribosome recycling factor K02838 frr; ribosome recycling factor D NLK58_18135 prmC; (GenBank) peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D NLK58_18090 pth; (GenBank) aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D NLK58_04150 infA; (GenBank) translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D NLK58_06925 efp; (GenBank) elongation factor P K02356 efp; elongation factor P D NLK58_07780 yeiP; (GenBank) elongation factor P-like protein YeiP K02356 efp; elongation factor P D NLK58_06920 epmA; (GenBank) EF-P lysine aminoacylase EpmA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D NLK58_06930 epmB; (GenBank) EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D NLK58_04255 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D NLK58_18400 prfB; (GenBank) peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D NLK58_17605 prfC; (GenBank) peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D NLK58_18930 arfB; (GenBank) aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:mmee03110] D NLK58_04155 clpA; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D NLK58_17520 clpB; (GenBank) ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D NLK58_04650 clpX; (GenBank) ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D NLK58_16745 hslU; (GenBank) ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D NLK58_00960 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NLK58_10260 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NLK58_05620 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NLK58_10255 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NLK58_08690 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D NLK58_11035 DnaJ domain-containing protein K05801 djlA; DnaJ like chaperone protein D NLK58_19420 djlA; (GenBank) co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein D NLK58_14090 hslO; (GenBank) Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D NLK58_10265 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D NLK58_12870 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein D NLK58_14095 hslR; (GenBank) ribosome-associated heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D NLK58_05625 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES D NLK58_18460 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107] D NLK58_00765 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NLK58_10225 ftsH; (GenBank) ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D NLK58_13195 atpB; (GenBank) F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NLK58_14735 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D NLK58_09840 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NLK58_18050 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy D NLK58_18820 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D NLK58_08020 hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D NLK58_06990 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D NLK58_01605 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NLK58_04705 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D NLK58_04635 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D NLK58_15380 FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D NLK58_17440 fkpB; (GenBank) FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D NLK58_02795 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D NLK58_18290 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D NLK58_07335 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D NLK58_08950 peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D NLK58_11015 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D NLK58_08270 thioredoxin family protein K03671 TXN; thioredoxin D NLK58_15405 trxA; (GenBank) thioredoxin TrxA K03671 TXN; thioredoxin D NLK58_10090 trxA; (GenBank) thioredoxin K05838 ybbN; putative thioredoxin D NLK58_17945 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1 D NLK58_18320 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D NLK58_11230 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D NLK58_15370 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D NLK58_18380 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D NLK58_04260 dsbD; (GenBank) protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D NLK58_05160 DsbE family thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:mmee04131] D NLK58_01355 ndk; (GenBank) nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D NLK58_00980 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NLK58_04605 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NLK58_05045 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NLK58_01810 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NLK58_04610 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NLK58_00960 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:mmee03051] D NLK58_00960 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:mmee03032] D NLK58_02995 rnhA; (GenBank) ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D NLK58_08500 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NLK58_14070 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D NLK58_04640 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NLK58_19715 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NLK58_00820 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NLK58_13085 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NLK58_18015 dnaB; (GenBank) replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D NLK58_15900 dnaG; (GenBank) DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D NLK58_16365 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NLK58_00140 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NLK58_13080 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NLK58_00355 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NLK58_06745 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NLK58_03200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NLK58_00065 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_02990 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_14505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_03395 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NLK58_20150 rnhB; (GenBank) ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D NLK58_15735 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NLK58_01585 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NLK58_00305 hda; (GenBank) DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D NLK58_00785 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NLK58_13065 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NLK58_06950 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NLK58_06980 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NLK58_01485 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NLK58_20195 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:mmee03036] D NLK58_08500 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NLK58_18485 rnc; (GenBank) ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D NLK58_00980 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NLK58_13005 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D NLK58_14070 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D NLK58_04640 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NLK58_19715 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NLK58_00820 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NLK58_08690 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein D NLK58_08685 chaperone modulator CbpM K18997 cbpM; chaperone modulatory protein CbpM D NLK58_13085 dnaA; (GenBank) chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D NLK58_10880 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D NLK58_10740 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D NLK58_06860 hfq; (GenBank) RNA chaperone Hfq K03666 hfq; host factor-I protein D NLK58_18895 LysR family transcriptional regulator ArgP K05596 argP; LysR family transcriptional regulator, arginine and lysine transport system/DNA replication regulator D NLK58_04040 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NLK58_07635 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NLK58_08360 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D NLK58_06700 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein D NLK58_01575 smc; (GenBank) chromosome segregation protein SMC K03529 smc; chromosome segregation protein D NLK58_01550 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D NLK58_01555 scpB; (GenBank) SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D NLK58_17740 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA D NLK58_00170 septum formation initiator family protein K05589 ftsB; cell division protein FtsB D NLK58_14130 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NLK58_17690 penicillin-binding transpeptidase domain-containing protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D NLK58_03075 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D NLK58_17685 ftsL; (GenBank) cell division protein FtsL K03586 ftsL; cell division protein FtsL D NLK58_17735 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ D NLK58_17715 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_14135 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NLK58_17745 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NLK58_01580 zipA; (GenBank) cell division protein ZipA K03528 zipA; cell division protein ZipA D NLK58_10660 cell division protein ZapA K09888 zapA; cell division protein ZapA D NLK58_10655 TIGR02449 family protein K09892 zapB; cell division protein ZapB D NLK58_06500 zapE; (GenBank) cell division protein ZapE K06916 zapE; cell division protein ZapE D NLK58_06875 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D NLK58_10910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_13155 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_14760 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_18245 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D NLK58_18240 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D NLK58_18235 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D NLK58_05450 SulA-like leucine-rich domain-containing protein K13053 sulA; cell division inhibitor SulA D NLK58_10980 slmA; (GenBank) nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D NLK58_06655 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NLK58_06650 mreC; (GenBank) rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D NLK58_06645 mreD; (GenBank) rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D NLK58_17910 rodA; (GenBank) rod shape-determining protein RodA K05837 rodA; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_00310 ParA family protein K03496 parA; chromosome partitioning protein D NLK58_05260 ParA family protein K03496 parA; chromosome partitioning protein D NLK58_13180 AAA family ATPase K03496 parA; chromosome partitioning protein D NLK58_13185 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D NLK58_06950 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NLK58_06980 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NLK58_13170 mnmG; (GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D NLK58_13175 rsmG; (GenBank) 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D NLK58_15545 xerC; (GenBank) tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D NLK58_18375 xerD; (GenBank) site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D NLK58_00260 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D NLK58_15080 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D NLK58_11240 yihA; (GenBank) ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:mmee03400] D NLK58_18145 phrB; (GenBank) deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D NLK58_09900 mutY; (GenBank) A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D NLK58_00220 nth; (GenBank) endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D NLK58_13005 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] D NLK58_17775 Nudix family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D NLK58_11200 dut; (GenBank) dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D NLK58_10475 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D NLK58_19425 alkB; (GenBank) DNA oxidative demethylase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D NLK58_12235 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D NLK58_14110 mutM; (GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D NLK58_02875 xthA; (GenBank) exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D NLK58_15760 exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D NLK58_18395 recJ; (GenBank) single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D NLK58_01585 ligA; (GenBank) NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D NLK58_15735 polA; (GenBank) DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D NLK58_16355 uvrA; (GenBank) excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D NLK58_00850 uvrB; (GenBank) excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D NLK58_01735 uvrC; (GenBank) excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D NLK58_11635 uvrD; (GenBank) DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NLK58_11685 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D NLK58_16185 rpoB; (GenBank) DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D NLK58_16190 rpoC; (GenBank) DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D NLK58_16345 rpoA; (GenBank) DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D NLK58_15785 rpoZ; (GenBank) DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D NLK58_05050 mfd; (GenBank) transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D NLK58_19560 mutS; (GenBank) DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D NLK58_06870 mutL; (GenBank) DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D NLK58_05890 sbcB; (GenBank) exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D NLK58_04020 xseA; (GenBank) exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D NLK58_17800 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D NLK58_00140 dnaE; (GenBank) DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D NLK58_13080 dnaN; (GenBank) DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D NLK58_00355 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D NLK58_06745 holA; (GenBank) DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D NLK58_03200 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D NLK58_00065 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_02990 dnaQ; (GenBank) DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_14505 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D NLK58_03395 dnaX; (GenBank) DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D NLK58_16365 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NLK58_08490 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D NLK58_13035 recB; (GenBank) exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D NLK58_13020 recC; (GenBank) exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D NLK58_13040 recD; (GenBank) exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D NLK58_19570 recA; (GenBank) recombinase RecA K03553 recA; recombination protein RecA D NLK58_03915 ruvA; (GenBank) Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D NLK58_03910 ruvB; (GenBank) Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D NLK58_03920 ruvC; (GenBank) crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D NLK58_16770 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D NLK58_16850 radA; (GenBank) DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D NLK58_13070 recF; (GenBank) DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D NLK58_15810 recG; (GenBank) ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D NLK58_18495 recO; (GenBank) DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D NLK58_03385 recR; (GenBank) recombination mediator RecR K06187 recR; recombination protein RecR D NLK58_10270 recN; (GenBank) DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D NLK58_20340 rdgC; (GenBank) recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D NLK58_08375 DEAD/DEAH box helicase K19789 radD; DNA repair protein RadD D NLK58_00785 gyrA; (GenBank) DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D NLK58_13065 gyrB; (GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D NLK58_01485 topA; (GenBank) type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D NLK58_14070 HU family DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D NLK58_04640 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D NLK58_10740 fis; (GenBank) DNA-binding transcriptional regulator Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D NLK58_19715 ihfA; (GenBank) integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D NLK58_00820 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D NLK58_02605 recQ; (GenBank) DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D NLK58_18260 dinB; (GenBank) DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D NLK58_05455 lexA; (GenBank) transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D NLK58_00455 imuA; (GenBank) translesion DNA synthesis-associated protein ImuA K14160 imuA; protein ImuA D NLK58_00450 DNA polymerase Y family protein K14161 imuB; protein ImuB D NLK58_00445 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D NLK58_20415 recombination regulator RecX K03565 recX; regulatory protein D NLK58_15340 rep; (GenBank) DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D NLK58_03255 dinG; (GenBank) ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D NLK58_01150 adenosylcobalamin-dependent ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NLK58_13430 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D NLK58_13435 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:mmee03029] D NLK58_17630 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D NLK58_10180 infB; (GenBank) translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D NLK58_19690 infC; (GenBank) translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D NLK58_20085 tsf; (GenBank) translation elongation factor Ts K02357 tsf; elongation factor Ts D NLK58_16145 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D NLK58_16210 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D NLK58_16205 fusA; (GenBank) elongation factor G K02355 fusA; elongation factor G D NLK58_18490 era; (GenBank) GTPase Era K03595 era; GTPase D NLK58_16080 tyrS; (GenBank) tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D NLK58_06735 leuS; (GenBank) leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D NLK58_03925 aspS; (GenBank) aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D NLK58_16760 argS; (GenBank) arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D NLK58_06665 gatA; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D NLK58_06670 gatB; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D NLK58_06660 gatC; (GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D NLK58_16365 ssb; (GenBank) single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D NLK58_20120 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D NLK58_10260 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NLK58_10265 grpE; (GenBank) nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D NLK58_05620 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NLK58_05625 groES; (GenBank) co-chaperone GroES K04078 groES; chaperonin GroES D NLK58_10255 dnaJ; (GenBank) molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D NLK58_01350 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D NLK58_18320 grxD; (GenBank) Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin D NLK58_00260 apbC; (GenBank) iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D NLK58_15080 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D NLK58_12795 cyoE; (GenBank) heme o synthase K02257 COX10; heme o synthase [EC:2.5.1.141] D NLK58_12800 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9] D NLK58_13105 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NLK58_12810 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein D NLK58_09555 SCO family protein K07152 SCO1; protein SCO1 D NLK58_12790 SCO family protein K07152 SCO1; protein SCO1 D NLK58_00960 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:mmee02000] D NLK58_04075 msbA; (GenBank) lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D NLK58_13045 ABC transporter ATP-binding protein/permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D NLK58_13050 ABC transporter transmembrane domain-containing protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D NLK58_02735 cydC; (GenBank) thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D NLK58_02730 cydD; (GenBank) thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D NLK58_01455 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D NLK58_11125 modA; (GenBank) molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D NLK58_11130 modB; (GenBank) molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D NLK58_11135 modC; (GenBank) molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D NLK58_15115 substrate-binding domain-containing protein K05772 tupA; tungstate transport system substrate-binding protein D NLK58_15125 ABC transporter permease K05773 tupB; tungstate transport system permease protein D NLK58_15120 ATP-binding cassette domain-containing protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D NLK58_12115 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NLK58_19365 ABC transporter substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D NLK58_12120 ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NLK58_19370 ntrB; (GenBank) nitrate ABC transporter permease K15577 nrtB; nitrate/nitrite transport system permease protein D NLK58_12125 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NLK58_19375 ABC transporter ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D NLK58_17160 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D NLK58_17165 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D NLK58_17170 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D NLK58_01190 Fe(3+) ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D NLK58_01185 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D NLK58_18310 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D NLK58_11090 ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein D NLK58_11095 ABC transporter permease subunit K02001 proW; glycine betaine/proline transport system permease protein D NLK58_11100 betaine/proline/choline family ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D NLK58_18695 glycine betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D NLK58_18700 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D NLK58_18710 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D NLK58_18705 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D NLK58_10465 putative urea ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NLK58_10540 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NLK58_11735 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NLK58_13820 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D NLK58_10485 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D NLK58_10535 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D NLK58_13815 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D NLK58_10490 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D NLK58_10530 ATP-binding cassette domain-containing protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D NLK58_13825 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D NLK58_07760 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NLK58_11590 ugpC; (GenBank) sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D NLK58_11605 ABC transporter substrate-binding protein K17315 gtsA; glucose/mannose transport system substrate-binding protein D NLK58_11600 sugar ABC transporter permease K17316 gtsB; glucose/mannose transport system permease protein D NLK58_11595 carbohydrate ABC transporter permease K17317 gtsC; glucose/mannose transport system permease protein D NLK58_04530 ABC transporter substrate-binding protein K17321 glpV; glycerol transport system substrate-binding protein D NLK58_04545 sugar ABC transporter permease K17322 glpP; glycerol transport system permease protein D NLK58_04540 carbohydrate ABC transporter permease K17323 glpQ; glycerol transport system permease protein D NLK58_04555 ABC transporter ATP-binding protein K17324 glpS; glycerol transport system ATP-binding protein D NLK58_04550 ABC transporter ATP-binding protein K17325 glpT; glycerol transport system ATP-binding protein D NLK58_07745 sugar ABC transporter substrate-binding protein K10227 smoE; polyol transport system substrate-binding protein D NLK58_07750 sugar ABC transporter permease K10228 smoF; polyol transport system permease protein D NLK58_07755 carbohydrate ABC transporter permease K10229 smoG; polyol transport system permease protein D NLK58_11555 fetB; (GenBank) iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D NLK58_11560 ATP-binding cassette domain-containing protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D NLK58_01750 MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NLK58_06550 mlaD; (GenBank) outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D NLK58_01760 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NLK58_06555 mlaE; (GenBank) lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D NLK58_01755 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NLK58_06560 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D NLK58_01745 ABC-type transport auxiliary lipoprotein family protein K18480 linN; cholesterol transport system auxiliary component D NLK58_06545 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein D NLK58_06540 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D NLK58_10965 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NLK58_11530 substrate-binding domain-containing protein K02040 pstS; phosphate transport system substrate-binding protein D NLK58_11525 pstC; (GenBank) phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D NLK58_11520 pstA; (GenBank) phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein D NLK58_11515 pstB; (GenBank) phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D NLK58_02645 putative selenate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D NLK58_16915 phnD; (GenBank) phosphate/phosphite/phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D NLK58_02655 ABC transporter permease K02042 phnE; phosphonate transport system permease protein D NLK58_16920 phnE; (GenBank) phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D NLK58_02650 ATP-binding cassette domain-containing protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D NLK58_16910 phnC; (GenBank) phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D NLK58_08735 transporter substrate-binding domain-containing protein K10036 glnH; glutamine transport system substrate-binding protein D NLK58_08740 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein D NLK58_08745 amino acid ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D NLK58_04730 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D NLK58_04725 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D NLK58_04720 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D NLK58_04715 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D NLK58_10010 ABC transporter substrate-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein D NLK58_10020 ABC transporter permease K10023 aotM; arginine/ornithine transport system permease protein D NLK58_10015 ABC transporter permease K10024 aotQ; arginine/ornithine transport system permease protein D NLK58_10005 ABC transporter ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1] D NLK58_01925 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_04515 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_07725 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_10115 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_13800 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_14960 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_15160 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_15165 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_17070 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_19125 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D NLK58_01930 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_07720 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_10120 livH; (GenBank) high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D NLK58_13795 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_14955 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_15155 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_17075 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_19130 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein D NLK58_01935 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_07715 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_10125 high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein D NLK58_13790 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_14950 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_15150 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_17080 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_19135 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D NLK58_01940 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_07710 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_10130 livG; (GenBank) high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_13810 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_14945 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_15145 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_17060 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_19115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D NLK58_01945 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_07700 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_10135 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_13805 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_14940 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_15140 ATP-binding cassette domain-containing protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_17065 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_19120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D NLK58_14365 MetQ/NlpA family ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D NLK58_14360 ABC transporter permease K02072 metI; D-methionine transport system permease protein D NLK58_14355 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D NLK58_08565 urtA; (GenBank) urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D NLK58_08560 urtB; (GenBank) urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D NLK58_08555 urtC; (GenBank) urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D NLK58_08550 urtD; (GenBank) urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein D NLK58_08545 urtE; (GenBank) urea ABC transporter ATP-binding subunit UrtE K11963 urtE; urea transport system ATP-binding protein D NLK58_01170 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein D NLK58_01165 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein D NLK58_01160 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein D NLK58_00925 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D NLK58_02435 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D NLK58_07530 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D NLK58_10500 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D NLK58_11105 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D NLK58_13420 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D NLK58_14890 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D NLK58_03015 extracellular solute-binding protein K13893 yejA; microcin C transport system substrate-binding protein D NLK58_03020 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D NLK58_03025 ABC transporter permease K13895 yejE; microcin C transport system permease protein D NLK58_03030 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein D NLK58_12335 ABC transporter ATP-binding protein K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D NLK58_12320 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D NLK58_14520 cobalamin-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D NLK58_12325 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D NLK58_12330 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D NLK58_14525 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D NLK58_14530 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D NLK58_04955 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D NLK58_13975 znuB; (GenBank) zinc ABC transporter permease subunit ZnuB K09816 znuB; zinc transport system permease protein D NLK58_13980 znuC; (GenBank) zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D NLK58_06185 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein D NLK58_06175 chain-length determining protein K10107 kpsE; capsular polysaccharide transport system permease protein D NLK58_06180 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12] D NLK58_00365 lptF; (GenBank) LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D NLK58_00370 lptG; (GenBank) LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D NLK58_06585 lptB; (GenBank) LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D NLK58_08910 ABC transporter permease K19341 nosY; Cu-processing system permease protein D NLK58_08915 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein D NLK58_09380 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein D NLK58_09385 ABC transporter permease K25181 ybhS; drug efflux transport system permease protein D NLK58_09390 ATP-binding cassette domain-containing protein K25182 ybhF; drug efflux transport system ATP-binding protein D NLK58_09395 efflux RND transporter periplasmic adaptor subunit K25183 ybhG; membrane fusion protein YbhG D NLK58_04105 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E_F; lipoprotein-releasing system permease protein D NLK58_04100 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D NLK58_05175 ccmD; (GenBank) heme exporter protein CcmD K02196 ccmD; heme exporter protein D D NLK58_05180 heme ABC transporter permease K02195 ccmC; heme exporter protein C D NLK58_05185 ccmB; (GenBank) heme exporter protein CcmB K02194 ccmB; heme exporter protein B D NLK58_05190 ccmA; (GenBank) cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D NLK58_14135 ftsX; (GenBank) permease-like cell division protein FtsX K09811 ftsX; cell division transport system permease protein D NLK58_14130 ftsE; (GenBank) cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D NLK58_01220 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NLK58_02680 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NLK58_10525 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D NLK58_01215 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NLK58_02675 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NLK58_10520 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D NLK58_00920 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D NLK58_04380 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D NLK58_14785 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D NLK58_00915 ATP-binding cassette domain-containing protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NLK58_04385 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NLK58_09240 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NLK58_14780 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D NLK58_09775 sufC; (GenBank) Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D NLK58_02065 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D NLK58_04365 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D NLK58_14400 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D NLK58_13875 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D NLK58_12760 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D NLK58_03160 MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D NLK58_11565 arsJ; (GenBank) organoarsenical effux MFS transporter ArsJ K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter D NLK58_08975 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D NLK58_09695 antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D NLK58_09705 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D NLK58_09715 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D NLK58_05655 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D NLK58_13885 Bcr/CflA family multidrug efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D NLK58_12590 multidrug efflux MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D NLK58_16735 ptsP; (GenBank) phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D NLK58_06610 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D NLK58_06600 ptsN; (GenBank) PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D NLK58_04740 ion transporter K10716 kch; voltage-gated potassium channel D NLK58_16545 potassium channel family protein K10716 kch; voltage-gated potassium channel D NLK58_14815 ammonium transporter K03320 amt; ammonium transporter, Amt family D NLK58_15640 ammonium transporter K03320 amt; ammonium transporter, Amt family D NLK58_08200 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NLK58_11115 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D NLK58_17640 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A D NLK58_05135 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D NLK58_05140 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D NLK58_11815 marine proteobacterial sortase target protein K07114 yfbK; Ca-activated chloride channel homolog D NLK58_02910 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease D NLK58_14300 formate/nitrite transporter family protein K21993 fdhC; formate transporter D NLK58_01110 mechanosensitive ion channel K22051 mscM; miniconductance mechanosensitive channel D NLK58_11490 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel D NLK58_05065 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein D NLK58_06615 mgtE; (GenBank) magnesium transporter K06213 mgtE; magnesium transporter D NLK58_13655 magnesium transporter K06213 mgtE; magnesium transporter D NLK58_05270 flagellar motor protein K02556 motA; chemotaxis protein MotA D NLK58_06910 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NLK58_12885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_14825 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_05265 motD; (GenBank) flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D NLK58_06905 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NLK58_12880 OmpA family protein K02557 motB; chemotaxis protein MotB D NLK58_14820 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NLK58_20325 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D NLK58_03320 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D NLK58_04085 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D NLK58_04430 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D NLK58_14320 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB D NLK58_04080 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NLK58_14310 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NLK58_14315 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D NLK58_03900 tolQ; (GenBank) protein TolQ K03562 tolQ; biopolymer transport protein TolQ D NLK58_03895 tolR; (GenBank) protein TolR K03560 tolR; biopolymer transport protein TolR D NLK58_04420 biopolymer transporter ExbD K03560 tolR; biopolymer transport protein TolR D NLK58_11460 crcB; (GenBank) fluoride efflux transporter CrcB K06199 crcB; fluoride exporter D NLK58_12430 merT; (GenBank) mercuric ion transporter MerT K08363 merT; mercuric ion transport protein D NLK58_12435 merP; (GenBank) mercury resistance system periplasmic binding protein MerP K08364 merP; periplasmic mercuric ion binding protein D NLK58_18340 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D NLK58_08165 OprO/OprP family phosphate-selective porin K07221 oprO_P; phosphate-selective porin OprO and OprP D NLK58_08750 porin K07221 oprO_P; phosphate-selective porin OprO and OprP D NLK58_11690 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D NLK58_15725 outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein D NLK58_10755 TonB-dependent receptor K16091 fecA; Fe(3+) dicitrate transport protein D NLK58_12315 TonB-dependent siderophore receptor K16091 fecA; Fe(3+) dicitrate transport protein D NLK58_14515 TonB-dependent receptor K16092 btuB; vitamin B12 transporter D NLK58_02055 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D NLK58_03970 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D NLK58_09260 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D NLK58_16530 TolC family protein K15725 czcC; outer membrane protein, heavy metal efflux system D NLK58_09220 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system D NLK58_12410 TolC family protein K07796 cusC; outer membrane protein, copper/silver efflux system D NLK58_16680 TolC family outer membrane protein K12340 tolC; outer membrane protein D NLK58_03675 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein D NLK58_20120 bamA; (GenBank) outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D NLK58_01390 bamB; (GenBank) outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D NLK58_03830 bamC; (GenBank) outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D NLK58_17505 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D NLK58_10280 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D NLK58_05480 autotransporter assembly complex protein TamA K07278 tamA; translocation and assembly module TamA D NLK58_05475 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB D NLK58_06580 lptA; (GenBank) lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D NLK58_06575 lptC; (GenBank) LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D NLK58_11020 lptD; (GenBank) LPS assembly protein LptD K04744 lptD; LPS-assembly protein D NLK58_06740 lptE; (GenBank) LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D NLK58_06720 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein D NLK58_08840 CidA/LrgA family protein K06518 cidA; holin-like protein D NLK58_15300 CidA/LrgA family protein K06518 cidA; holin-like protein D NLK58_02275 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NLK58_09545 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NLK58_16535 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D NLK58_00760 divalent cation transporter K07238 TC.ZIP; zinc transporter, ZIP family D NLK58_03960 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D NLK58_09270 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D NLK58_16520 CusA/CzcA family heavy metal efflux RND transporter K15726 czcA; heavy metal efflux system protein D NLK58_09210 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D NLK58_12420 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D NLK58_10915 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_13160 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_14765 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_19400 efflux RND transporter permease subunit K18989 vexF; multidrug efflux pump D NLK58_08610 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family D NLK58_07540 rarD; (GenBank) EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D NLK58_13460 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein D NLK58_07805 BCCT family transporter K05020 opuD; glycine betaine transporter D NLK58_09205 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D NLK58_01020 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter D NLK58_09950 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D NLK58_10355 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D NLK58_00055 cation acetate symporter K14393 actP; cation/acetate symporter D NLK58_05515 nhaA; (GenBank) Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D NLK58_13410 nhaB; (GenBank) sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D NLK58_01025 cation:proton antiporter K24160 NHA1; sodium/hydrogen antiporter D NLK58_12550 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D NLK58_07860 monovalent cation:proton antiporter-2 (CPA2) family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D NLK58_02455 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D NLK58_18070 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D NLK58_12930 trkA; (GenBank) Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D NLK58_05320 uracil-xanthine permease family protein K02824 uraA; uracil permease D NLK58_07065 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D NLK58_15035 benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein D NLK58_16045 chloride channel protein K03281 clcA; chloride channel protein, CIC family D NLK58_10830 dauA; (GenBank) C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D NLK58_14680 sulP; (GenBank) sulfate permease K03321 TC.SULP; sulfate permease, SulP family D NLK58_19435 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D NLK58_07125 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_07595 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_09995 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_10855 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_12725 TRAP transporter substrate-binding protein K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_19450 dctP; (GenBank) TRAP transporter substrate-binding protein DctP K11688 dctP; TRAP-type transport system periplasmic protein D NLK58_07600 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D NLK58_08285 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D NLK58_09990 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein D NLK58_10860 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein D NLK58_12720 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein D NLK58_17120 TRAP transporter small permease subunit K11689 dctQ; TRAP-type transport system small permease protein D NLK58_19455 TRAP transporter small permease K11689 dctQ; TRAP-type transport system small permease protein D NLK58_07605 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_08280 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein D NLK58_09985 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_10865 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_12715 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_17125 TRAP transporter large permease subunit K11690 dctM; TRAP-type transport system large permease protein D NLK58_19460 TRAP transporter large permease K11690 dctM; TRAP-type transport system large permease protein D NLK58_11725 Na/Pi symporter K03324 yjbB; phosphate:Na+ symporter D NLK58_11580 arsB; (GenBank) ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter D NLK58_07200 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A D NLK58_07205 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C D NLK58_07210 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D D NLK58_07215 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E D NLK58_07220 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F D NLK58_07225 Na+/H+ antiporter subunit G K05564 phaG; multicomponent K+:H+ antiporter subunit G D NLK58_17420 murJ; (GenBank) murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D NLK58_04960 AEC family transporter K13936 mdcF; malonate transporter and related proteins D NLK58_01700 AEC family transporter K24180 mleP; malate permease and related proteins D NLK58_09570 AEC family transporter K24180 mleP; malate permease and related proteins D NLK58_13840 AEC family transporter K24180 mleP; malate permease and related proteins D NLK58_18900 LysE/ArgO family amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D NLK58_09955 rhtB; (GenBank) homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D NLK58_10890 LysE family translocator K05835 rhtC; threonine efflux protein D NLK58_07300 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D NLK58_07295 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D NLK58_07500 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein D NLK58_07505 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein D NLK58_07510 tripartite tricarboxylate transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein D NLK58_03845 AI-2E family transporter K03548 perM; putative permease D NLK58_13500 VIT family protein K22736 VIT; vacuolar iron transporter family protein D NLK58_13765 MarC family protein K05595 marC; multiple antibiotic resistance protein D NLK58_17715 ftsW; (GenBank) putative lipid II flippase FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D NLK58_11630 manganese efflux pump MntP family protein K23242 mntP; manganese efflux pump family protein D NLK58_09135 iron transporter K07230 p19; periplasmic iron binding protein D NLK58_11740 LysO family transporter K28370 lysO; lysine exporter D NLK58_14035 energy transducer TonB K03832 tonB; periplasmic protein TonB D NLK58_14305 energy transducer TonB K03832 tonB; periplasmic protein TonB D NLK58_03880 pal; (GenBank) peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein D NLK58_11790 OmpA family protein K03640 pal; peptidoglycan-associated lipoprotein D NLK58_03890 tolA; (GenBank) cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D NLK58_03885 tolB; (GenBank) Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein D NLK58_00440 sodium ion-translocating decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D NLK58_00435 oadA; (GenBank) sodium-extruding oxaloacetate decarboxylase subunit alpha K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D NLK58_00430 OadG family transporter subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D NLK58_09500 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D NLK58_12370 hypothetical protein K06196 ccdA; cytochrome c-type biogenesis protein D NLK58_08970 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D NLK58_08965 narH; (GenBank) nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D NLK58_08955 narI; (GenBank) respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D NLK58_15485 MtrB/PioB family decaheme-associated outer membrane protein K28381 mtrB_E; extracellular iron oxide respiratory system outer membrane component MtrB/E D NLK58_03965 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D NLK58_09265 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D NLK58_16525 efflux RND transporter periplasmic adaptor subunit K15727 czcB; membrane fusion protein, heavy metal efflux system D NLK58_09215 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D NLK58_12415 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D NLK58_10910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_13155 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_14760 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_19395 efflux RND transporter periplasmic adaptor subunit K18990 vexE; membrane fusion protein, multidrug efflux system D NLK58_03665 polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D NLK58_03670 lipopolysaccharide biosynthesis protein K25590 epsF; protein tyrosine kinase modulator D NLK58_05165 heme lyase CcmF/NrfE family subunit K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:mmee02044] D NLK58_16680 TolC family outer membrane protein K12340 tolC; outer membrane protein D NLK58_03265 AAA family ATPase K02450 gspA; general secretion pathway protein A D NLK58_03260 general secretion pathway protein GspB K02451 gspB; general secretion pathway protein B D NLK58_01985 general secretion pathway protein GspC K02452 gspC; general secretion pathway protein C D NLK58_05610 PDZ domain-containing protein K02452 gspC; general secretion pathway protein C D NLK58_05605 gspD; (GenBank) type II secretion system secretin GspD K02453 gspD; general secretion pathway protein D D NLK58_00120 GspE/PulE family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NLK58_01990 gspE; (GenBank) type II secretion system ATPase GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D NLK58_01995 gspF; (GenBank) type II secretion system inner membrane protein GspF K02455 gspF; general secretion pathway protein F D NLK58_02000 gspG; (GenBank) type II secretion system major pseudopilin GspG K02456 gspG; general secretion pathway protein G D NLK58_02005 gspH; (GenBank) type II secretion system minor pseudopilin GspH K02457 gspH; general secretion pathway protein H D NLK58_02010 gspI; (GenBank) type II secretion system minor pseudopilin GspI K02458 gspI; general secretion pathway protein I D NLK58_02015 gspJ; (GenBank) type II secretion system minor pseudopilin GspJ K02459 gspJ; general secretion pathway protein J D NLK58_02020 gspK; (GenBank) type II secretion system minor pseudopilin GspK K02460 gspK; general secretion pathway protein K D NLK58_02025 gspL; (GenBank) type II secretion system protein GspL K02461 gspL; general secretion pathway protein L D NLK58_02030 type II secretion system protein M K02462 gspM; general secretion pathway protein M D NLK58_05615 type II secretion system protein N K02463 gspN; general secretion pathway protein N D NLK58_06435 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NLK58_06335 pilin K02650 pilA; type IV pilus assembly protein PilA D NLK58_06420 pilin K02650 pilA; type IV pilus assembly protein PilA D NLK58_05210 tadA; (GenBank) Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB D NLK58_06425 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D NLK58_06430 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D NLK58_17480 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE D NLK58_01365 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D NLK58_14025 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D NLK58_14020 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D NLK58_14015 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D NLK58_14010 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D NLK58_14005 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK D NLK58_16790 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D NLK58_16795 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D NLK58_16800 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D NLK58_16805 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D NLK58_16810 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D NLK58_15715 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D NLK58_15720 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D NLK58_17455 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D NLK58_17460 PilW family protein K02672 pilW; type IV pilus assembly protein PilW D NLK58_17465 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D NLK58_17475 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1 D NLK58_03195 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D NLK58_02985 chemotaxis protein K27041 fimL; scaffold protein FimL D NLK58_17450 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D NLK58_17485 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT D NLK58_03130 hypothetical protein K08086 fimV; pilus assembly protein FimV D NLK58_07830 hypothetical protein K10924 mshA; MSHA pilin protein MshA D NLK58_16425 type II secretion system GspH family protein K10924 mshA; MSHA pilin protein MshA D NLK58_16420 prepilin-type N-terminal cleavage/methylation domain-containing protein K10925 mshB; MSHA pilin protein MshB D NLK58_16430 type II secretion system GspH family protein K10926 mshC; MSHA pilin protein MshC D NLK58_16435 type II secretion system GspH family protein K10927 mshD; MSHA pilin protein MshD D NLK58_16405 GspE/PulE family protein K12276 mshE; MSHA biogenesis protein MshE D NLK58_16410 type II secretion system F family protein K12278 mshG; MSHA biogenesis protein MshG D NLK58_16370 biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI D NLK58_16375 PilN domain-containing protein K12279 mshI; MSHA biogenesis protein MshI D NLK58_16380 gspM; (GenBank) type II secretion system protein GspM K12280 mshJ; MSHA biogenesis protein MshJ D NLK58_16385 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK D NLK58_16390 mshL; (GenBank) pilus (MSHA type) biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL D NLK58_16395 AAA family ATPase K12283 mshM; MSHA biogenesis protein MshM D NLK58_16400 tetratricopeptide repeat protein K12284 mshN; MSHA biogenesis protein MshN D NLK58_16440 type II secretion system GspH family protein K12285 mshO; MSHA biogenesis protein MshO D NLK58_16445 hypothetical protein K12286 mshP; MSHA biogenesis protein MshP D NLK58_16450 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ D NLK58_15700 YggT family protein K02221 yggT; YggT family protein D NLK58_08590 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA D NLK58_04090 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D NLK58_05310 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NLK58_05330 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D NLK58_05200 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K04061 flhB2; flagellar biosynthesis protein D NLK58_05410 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NLK58_05400 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D NLK58_05395 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NLK58_05355 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NLK58_05350 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NLK58_05345 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NLK58_05340 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NLK58_05335 fliR; (GenBank) flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NLK58_18380 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D NLK58_14255 tssM; (GenBank) type VI secretion system membrane subunit TssM K11891 impL; type VI secretion system protein ImpL D NLK58_14230 icmH; (GenBank) type IVB secretion system protein IcmH/DotU K11892 impK; type VI secretion system protein ImpK D NLK58_14225 tssK; (GenBank) type VI secretion system baseplate subunit TssK K11893 impJ; type VI secretion system protein ImpJ D NLK58_14210 tssG; (GenBank) type VI secretion system baseplate subunit TssG K11895 impH; type VI secretion system protein ImpH D NLK58_14205 tssF; (GenBank) type VI secretion system baseplate subunit TssF K11896 impG; type VI secretion system protein ImpG D NLK58_14195 tssC; (GenBank) type VI secretion system contractile sheath large subunit K11900 impC; type VI secretion system protein ImpC D NLK58_14190 tssB; (GenBank) type VI secretion system contractile sheath small subunit K11901 impB; type VI secretion system protein ImpB D NLK58_14290 Hcp family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D NLK58_14260 vgrG; (GenBank) type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D NLK58_19065 vgrG; (GenBank) type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D NLK58_19990 vgrG; (GenBank) type VI secretion system tip protein VgrG K11904 vgrG; type VI secretion system secreted protein VgrG D NLK58_14200 tssE; (GenBank) type VI secretion system baseplate subunit TssE K11905 K11905; type VI secretion system protein D NLK58_14220 tssJ; (GenBank) type VI secretion system lipoprotein TssJ K11906 vasD; type VI secretion system protein VasD D NLK58_14235 tssH; (GenBank) type VI secretion system ATPase TssH K11907 vasG; type VI secretion system protein VasG D NLK58_14250 tssA; (GenBank) type VI secretion system protein TssA K11910 vasJ; type VI secretion system protein VasJ D NLK58_14215 tagH; (GenBank) type VI secretion system-associated FHA domain protein TagH K11894 impI; type VI secretion system protein ImpI D NLK58_14245 tagO; (GenBank) type VI secretion system-associated protein TagO K11909 vasI; type VI secretion system protein VasI D NLK58_17765 secA; (GenBank) preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D NLK58_09840 secB; (GenBank) protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB D NLK58_01320 secD; (GenBank) protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D NLK58_16155 secE; (GenBank) preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D NLK58_01325 secF; (GenBank) protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D NLK58_10200 secG; (GenBank) preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D NLK58_16320 secY; (GenBank) preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D NLK58_18350 ffh; (GenBank) signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D NLK58_14125 ftsY; (GenBank) signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D NLK58_01315 yajC; (GenBank) preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D NLK58_13105 yidC; (GenBank) membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D NLK58_10610 tatA; (GenBank) twin-arginine translocase TatA/TatE family subunit K03116 tatA; sec-independent protein translocase protein TatA D NLK58_10615 tatB; (GenBank) Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D NLK58_10620 tatC; (GenBank) twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:mmee02042] D NLK58_18340 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D NLK58_09680 hemolysin III family protein K11068 hlyIII; hemolysin III D NLK58_10845 protein O-GlcNAcase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 02022 Two-component system [BR:mmee02022] D NLK58_11370 phoR; (GenBank) phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D NLK58_11365 phoB; (GenBank) phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D NLK58_18300 ATP-binding protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D NLK58_18295 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D NLK58_07260 HAMP domain-containing histidine kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D NLK58_07265 response regulator transcription factor K07662 cpxR; two-component system, OmpR family, response regulator CpxR D NLK58_14625 ATP-binding protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D NLK58_14630 response regulator transcription factor K07666 qseB; two-component system, OmpR family, response regulator QseB D NLK58_02140 ATP-binding protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D NLK58_02145 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NLK58_02285 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NLK58_09305 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NLK58_11615 response regulator K02483 K02483; two-component system, OmpR family, response regulator D NLK58_11820 pdsR; (GenBank) proteobacterial dedicated sortase system response regulator K02483 K02483; two-component system, OmpR family, response regulator D NLK58_14155 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NLK58_14600 response regulator K02483 K02483; two-component system, OmpR family, response regulator D NLK58_16505 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator D NLK58_08980 histidine kinase K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D NLK58_08985 narL; (GenBank) two-component system response regulator NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D NLK58_18505 ATP-binding protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D NLK58_01730 uvrY; (GenBank) UvrY/SirA/GacA family response regulator transcription factor K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D NLK58_15560 transporter substrate-binding domain-containing protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D NLK58_07515 sensor histidine kinase K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3] D NLK58_07520 response regulator K02475 K02475; two-component system, CitB family, response regulator D NLK58_15470 sensor histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D NLK58_15465 LytTR family DNA-binding domain-containing protein K08083 algR; two-component system, LytTR family, response regulator AlgR D NLK58_16460 glnL; (GenBank) nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NLK58_18600 HDOD domain-containing protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D NLK58_16455 ntrC; (GenBank) nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D NLK58_15955 sigma-54 dependent transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D NLK58_15170 sigma-54 dependent transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D NLK58_17495 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D NLK58_17490 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D NLK58_18200 ATP-binding protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D NLK58_18205 sigma-54 dependent transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D NLK58_03430 prsR; (GenBank) PEP-CTERM-box response regulator transcription factor K02481 flgR; two-component system, NtrC family, response regulator D NLK58_05280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NLK58_05290 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NLK58_05275 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NLK58_12995 PAS domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D NLK58_01630 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NLK58_10325 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NLK58_14000 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D NLK58_14025 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D NLK58_14020 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D NLK58_13995 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D NLK58_19595 response regulator K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D NLK58_19590 fixJ; (GenBank) response regulator FixJ K14987 fixJ; two-component system, LuxR family, response regulator FixJ D NLK58_05425 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D NLK58_05420 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NLK58_04215 ATP-binding protein K20973 sagS; two-component system, sensor histidine kinase SagS [EC:2.7.13.3] D NLK58_02045 ATP-binding protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D NLK58_10550 hybrid sensor histidine kinase/response regulator K20975 K20975; two-component system, sensor histidine kinase [EC:2.7.13.3] D NLK58_05375 Hpt domain-containing protein K20976 hptB; histidine phosphotransfer protein HptB D NLK58_05380 fused response regulator/phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator C 02035 Bacterial motility proteins [BR:mmee02035] D NLK58_05280 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D NLK58_05250 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NLK58_05255 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D NLK58_01635 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D NLK58_05275 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D NLK58_12995 PAS domain-containing protein K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D NLK58_05290 cheY; (GenBank) chemotaxis response regulator CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D NLK58_05285 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D NLK58_01630 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NLK58_10325 chemotaxis protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D NLK58_00340 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_00415 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_01780 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_02125 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_02615 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_07155 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_07400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_08215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_08845 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_14425 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_18210 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_19485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_20215 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D NLK58_10935 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor D NLK58_05400 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D NLK58_05395 fliI; (GenBank) flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D NLK58_05390 fliJ; (GenBank) flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D NLK58_05350 fliO; (GenBank) flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ D NLK58_05345 fliP; (GenBank) flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP D NLK58_05340 fliQ; (GenBank) flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D NLK58_05335 fliR; (GenBank) flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D NLK58_05310 flhA; (GenBank) flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D NLK58_05330 flhB; (GenBank) flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D NLK58_05405 fliG; (GenBank) flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D NLK58_05360 fliM; (GenBank) flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D NLK58_05355 fliN; (GenBank) flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D NLK58_05410 fliF; (GenBank) flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D NLK58_01280 flagellar basal body P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI D NLK58_01625 flgA; (GenBank) flagellar basal body P-ring formation chaperone FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D NLK58_01275 flgH; (GenBank) flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D NLK58_05365 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NLK58_15365 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL D NLK58_05415 fliE; (GenBank) flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D NLK58_05370 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D NLK58_01245 flgB; (GenBank) flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D NLK58_01250 flgC; (GenBank) flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D NLK58_01255 flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D NLK58_01265 flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D NLK58_01270 flgG; (GenBank) flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D NLK58_01285 flgJ; (GenBank) flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D NLK58_01260 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D NLK58_01290 flgK; (GenBank) flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D NLK58_01295 flgL; (GenBank) flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D NLK58_01615 flagellar protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN D NLK58_09810 LPP20 family lipoprotein K09860 flgP; outer membrane protein FlgP D NLK58_20325 OmpA family protein K21218 motY; sodium-type flagellar protein MotY D NLK58_05705 flagellin domain-containing protein K02406 fliC; flagellin D NLK58_05715 flagellin K02406 fliC; flagellin D NLK58_05695 fliD; (GenBank) flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D NLK58_05690 fliS; (GenBank) flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS D NLK58_05435 SOS cell division inhibitor K02423 fliT; flagellar protein FliT D NLK58_05295 RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D NLK58_05270 flagellar motor protein K02556 motA; chemotaxis protein MotA D NLK58_06910 motA; (GenBank) flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D NLK58_12885 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_14825 MotA/TolQ/ExbB proton channel family protein K02556 motA; chemotaxis protein MotA D NLK58_05265 motD; (GenBank) flagellar motor protein MotD K02557 motB; chemotaxis protein MotB D NLK58_06905 motB; (GenBank) flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NLK58_12880 OmpA family protein K02557 motB; chemotaxis protein MotB D NLK58_14820 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D NLK58_05430 sigma-54 dependent transcriptional regulator K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein D NLK58_05425 ATP-binding protein K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D NLK58_05420 sigma-54 dependent transcriptional regulator K10943 flrC; two-component system, response regulator FlrC D NLK58_01620 flgM; (GenBank) flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D NLK58_05700 flagellar protein FlaG K06603 flaG; flagellar protein FlaG D NLK58_05305 flhF; (GenBank) flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF D NLK58_05300 MinD/ParA family protein K04562 flhG; flagellar biosynthesis protein FlhG D NLK58_18605 AAA family ATPase K04562 flhG; flagellar biosynthesis protein FlhG D NLK58_14025 pilG; (GenBank) twitching motility response regulator PilG K02657 pilG; twitching motility two-component system response regulator PilG D NLK58_14020 pilH; (GenBank) twitching motility response regulator PilH K02658 pilH; twitching motility two-component system response regulator PilH D NLK58_14015 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D NLK58_14010 methyl-accepting chemotaxis protein K02660 pilJ; twitching motility protein PilJ D NLK58_14005 protein-glutamate O-methyltransferase CheR K02661 pilK; type IV pilus assembly protein PilK D NLK58_14000 Hpt domain-containing protein K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D NLK58_17490 sigma-54 dependent transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D NLK58_17495 ATP-binding protein K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D NLK58_15715 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT D NLK58_15720 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU D NLK58_13995 chemotaxis protein CheB K06597 chpB; chemosensory pili system protein ChpB (putative protein-glutamate methylesterase) D NLK58_13990 chemotaxis protein CheW K06598 chpC; chemosensory pili system protein ChpC D NLK58_06335 pilin K02650 pilA; type IV pilus assembly protein PilA D NLK58_06420 pilin K02650 pilA; type IV pilus assembly protein PilA D NLK58_05210 tadA; (GenBank) Flp pilus assembly complex ATPase component TadA K02652 pilB; type IV pilus assembly protein PilB D NLK58_06425 pilB; (GenBank) type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D NLK58_06430 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC D NLK58_06435 A24 family peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D NLK58_01365 pilW; (GenBank) type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF D NLK58_16810 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ D NLK58_16805 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D NLK58_16800 type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO D NLK58_16795 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN D NLK58_16790 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D NLK58_03195 PilZ domain-containing protein K02676 pilZ; type IV pilus assembly protein PilZ D NLK58_17455 pilV; (GenBank) type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV D NLK58_17460 PilW family protein K02672 pilW; type IV pilus assembly protein PilW D NLK58_17465 PilX N-terminal domain-containing pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX D NLK58_17475 PilC/PilY family type IV pilus protein K02674 pilY1; type IV pilus assembly protein PilY1 D NLK58_17480 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:mmee04812] D NLK58_00740 amrB; (GenBank) AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein D NLK58_06655 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NLK58_17745 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NLK58_17740 ftsA; (GenBank) cell division protein FtsA K03590 ftsA; cell division protein FtsA D NLK58_18245 minC; (GenBank) septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D NLK58_18240 minD; (GenBank) septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D NLK58_18235 minE; (GenBank) cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D NLK58_00310 ParA family protein K03496 parA; chromosome partitioning protein D NLK58_05260 ParA family protein K03496 parA; chromosome partitioning protein D NLK58_13180 AAA family ATPase K03496 parA; chromosome partitioning protein D NLK58_13185 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:mmee04147] D NLK58_00960 htpG; (GenBank) molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D NLK58_00980 fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D NLK58_00165 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_04525 eno; (GenBank) phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D NLK58_04605 gap; (GenBank) type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NLK58_05045 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D NLK58_08700 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D NLK58_01810 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NLK58_04610 pyk; (GenBank) pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D NLK58_01605 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D NLK58_05620 groL; (GenBank) chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D NLK58_10260 dnaK; (GenBank) molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D NLK58_15930 pgi; (GenBank) glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D NLK58_04015 guaB; (GenBank) IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D NLK58_16145 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D NLK58_16210 tuf; (GenBank) elongation factor Tu K02358 tuf; elongation factor Tu D NLK58_11505 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D NLK58_02065 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D NLK58_01175 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_03295 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_07365 AMP-binding protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D NLK58_02250 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_05535 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_06495 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08780 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_09830 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_19355 acetyl-CoA C-acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_20400 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D NLK58_08725 ahcY; (GenBank) adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D NLK58_18550 adk; (GenBank) adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D NLK58_07070 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D NLK58_15510 argH; (GenBank) argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D NLK58_05685 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D NLK58_02580 glgB; (GenBank) 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D NLK58_04565 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D NLK58_18305 glpK; (GenBank) glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D NLK58_10480 glnT; (GenBank) type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_16470 glnA; (GenBank) glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_19170 glutamine synthetase family protein K01915 glnA; glutamine synthetase [EC:6.3.1.2] D NLK58_11275 hemB; (GenBank) porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D NLK58_00460 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D NLK58_07160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_07165 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_07095 serA; (GenBank) phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D NLK58_10745 purH; (GenBank) bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D NLK58_01530 lpdA; (GenBank) dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D NLK58_02780 FAD-binding protein K03522 fixB; electron transfer flavoprotein alpha subunit D NLK58_13635 Glu/Leu/Phe/Val dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D NLK58_02705 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NLK58_04625 zwf; (GenBank) glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D NLK58_04520 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D NLK58_10205 tpiA; (GenBank) triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:mmee02048] D NLK58_16895 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D NLK58_18180 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D NLK58_16890 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D NLK58_16885 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D NLK58_08500 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D NLK58_11885 restriction endonuclease K07448 mrr; restriction system protein D NLK58_02390 type II toxin-antitoxin system PemK/MazF family toxin K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D NLK58_02395 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18842 chpS; antitoxin ChpS D NLK58_03715 type II toxin-antitoxin system RelE/ParE family toxin K06218 relE; mRNA interferase RelE/StbE D NLK58_01140 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D NLK58_07425 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D NLK58_12005 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D NLK58_13510 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-] D NLK58_01135 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D NLK58_07420 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM D NLK58_12000 type II toxin-antitoxin system Phd/YefM family antitoxin K19159 yefM; antitoxin YefM D NLK58_13515 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM D NLK58_05645 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_06025 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_06305 type II toxin-antitoxin system HipA family toxin K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_15220 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_19205 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D NLK58_06300 helix-turn-helix domain-containing protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D NLK58_12085 CcdB family protein K19163 ccdB; toxin CcdB D NLK58_06390 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA D NLK58_12090 type II toxin-antitoxin system CcdA family antitoxin K19164 ccdA; antitoxin CcdA D NLK58_00610 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D NLK58_03995 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D NLK58_08340 type II toxin-antitoxin system RelE/ParE family toxin K19092 parE1_3_4; toxin ParE1/3/4 D NLK58_00615 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D NLK58_03990 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D NLK58_05800 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D NLK58_05850 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D NLK58_08345 type II toxin-antitoxin system ParD family antitoxin K07746 parD1_3_4; antitoxin ParD1/3/4 D NLK58_03980 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D NLK58_08385 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D NLK58_09915 type II toxin-antitoxin system HigB family toxin K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D NLK58_06355 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D NLK58_07410 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D NLK58_12010 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D NLK58_13595 type II toxin-antitoxin system RelE/ParE family toxin K07334 higB-1; toxin HigB-1 D NLK58_03985 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D NLK58_08380 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D NLK58_06350 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D NLK58_07405 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D NLK58_12015 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D NLK58_13600 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D NLK58_13615 HigA family addiction module antitoxin K21498 higA-1; antitoxin HigA-1 D NLK58_04005 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D NLK58_04000 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D NLK58_02270 type II toxin-antitoxin system VapC family toxin K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-] D NLK58_05825 type II toxin-antitoxin system VapC family toxin K28279 vapC22; ribonuclease VapC22 [EC:3.1.-.-] D NLK58_02265 type II toxin-antitoxin system Phd/YefM family antitoxin K28280 vapB22; antitoxin VapB22 D NLK58_05820 type II toxin-antitoxin system prevent-host-death family antitoxin K28280 vapB22; antitoxin VapB22 D NLK58_17745 ftsZ; (GenBank) cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D NLK58_06655 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D NLK58_06950 parC; (GenBank) DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D NLK58_06980 parE; (GenBank) DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D NLK58_04950 gltX; (GenBank) glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D NLK58_18430 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB D NLK58_01350 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:mmee04052] D NLK58_14185 acyl-CoA-binding protein K08762 DBI; diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein) C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:mmee01504] D NLK58_10910 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_13155 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_14760 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D NLK58_10915 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_13160 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_14765 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D NLK58_16680 TolC family outer membrane protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:mmee00536] D NLK58_10845 protein O-GlcNAcase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:mmee00537] D NLK58_07160 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_07165 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D NLK58_10845 protein O-GlcNAcase K01197 hya; hyaluronoglucosaminidase [EC:3.2.1.35] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:mmee03100] D NLK58_00015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NLK58_04945 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NLK58_16095 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NLK58_17570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D NLK58_00400 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_00405 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_04675 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_15270 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_20275 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D NLK58_00840 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NLK58_00900 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D NLK58_05550 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NLK58_19610 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D NLK58_01770 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D NLK58_18105 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D NLK58_01420 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NLK58_04940 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D NLK58_01445 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NLK58_01765 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NLK58_12545 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NLK58_16135 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D NLK58_04670 tRNA-His K14226 tRNA-His; tRNA His D NLK58_00010 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NLK58_16090 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NLK58_17565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D NLK58_01300 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_02720 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_04665 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_10195 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_17980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D NLK58_03865 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NLK58_03870 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D NLK58_05530 tRNA-Met K14230 tRNA-Met; tRNA Met D NLK58_15890 tRNA-Ile K14230 tRNA-Met; tRNA Met D NLK58_18080 tRNA-Met K14230 tRNA-Met; tRNA Met D NLK58_20155 tRNA-Met K14230 tRNA-Met; tRNA Met D NLK58_09910 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D NLK58_04680 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NLK58_12950 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NLK58_19885 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D NLK58_00395 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NLK58_01680 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NLK58_02905 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D NLK58_16125 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NLK58_16140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D NLK58_16150 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D NLK58_16130 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D NLK58_03790 tRNA-Val K14237 tRNA-Val; tRNA Val D NLK58_05545 tRNA-Val K14237 tRNA-Val; tRNA Val D NLK58_05555 tRNA-Val K14237 tRNA-Val; tRNA Val D NLK58_00005 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_16085 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_17560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D NLK58_16100 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NLK58_17575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D NLK58_00025 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NLK58_16105 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NLK58_17580 rrf; (GenBank) 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D NLK58_17670 rnpB; (GenBank) RNase P RNA component class A K01978 rnpB; RNase P catalytic RNA component D NLK58_10665 ssrS; (GenBank) 6S RNA K28358 ssrS; RNA polymerase binding 6S RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D NLK58_18765 dkgB; (GenBank) 2,5-didehydrogluconate reductase DkgB K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D NLK58_11250 coniferyl aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] D NLK58_11570 ArsJ-associated glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107] D NLK58_19620 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D NLK58_10430 pqqC; (GenBank) pyrroloquinoline-quinone synthase PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D NLK58_00085 (2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D NLK58_00090 xanthine dehydrogenase family protein molybdopterin-binding subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D NLK58_16955 acyl-CoA/acyl-ACP dehydrogenase K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D NLK58_02790 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D NLK58_19840 NADH-quinone oxidoreductase subunit N K22169 fpoN; F420H2 dehydrogenase subunit N [EC:1.5.98.3] D NLK58_07055 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NLK58_15605 NADP-dependent oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D NLK58_13645 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D NLK58_13680 ahpF; (GenBank) alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D NLK58_10375 msrA; (GenBank) peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D NLK58_14500 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D NLK58_10370 msrB; (GenBank) peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D NLK58_12525 yghU; (GenBank) glutathione-dependent disulfide-bond oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D NLK58_13140 glutathione S-transferase N-terminal domain-containing protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D NLK58_17385 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D NLK58_17550 msrP; (GenBank) protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D NLK58_03840 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NLK58_13880 tpx; (GenBank) thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NLK58_14370 peroxiredoxin K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D NLK58_13665 ahpC; (GenBank) alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D NLK58_11155 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D NLK58_13910 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D NLK58_12440 merA; (GenBank) mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D NLK58_04750 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D NLK58_17210 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D NLK58_16925 phosphonate dehydrogenase K18916 ptxD; phosphonate dehydrogenase [EC:1.20.1.1] D NLK58_00130 arsC; (GenBank) arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D NLK58_09000 pqqE; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D NLK58_10420 pqqE; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqE K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D NLK58_00735 amrS; (GenBank) AmmeMemoRadiSam system radical SAM enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D NLK58_09120 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D NLK58_00195 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D NLK58_07385 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D NLK58_02860 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NLK58_05495 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NLK58_09350 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NLK58_09430 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NLK58_10870 cyclopropane-fatty-acyl-phospholipid synthase family protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D NLK58_03285 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D NLK58_06725 lnt; (GenBank) apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D NLK58_01850 1-acyl-sn-glycerol-3-phosphate acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270] D NLK58_03205 DUF3488 and transglutaminase-like domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D NLK58_04145 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D NLK58_17815 lgt; (GenBank) prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D NLK58_04505 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D NLK58_05010 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D NLK58_04905 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D NLK58_16550 glnE; (GenBank) bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D NLK58_00030 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_00550 reverse transcriptase domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_00630 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_01660 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_07495 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_09225 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_10220 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_11930 reverse transcriptase domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_11960 reverse transcriptase N-terminal domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_12075 reverse transcriptase N-terminal domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_13475 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_13520 reverse transcriptase N-terminal domain-containing protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_17130 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_18685 ltrA; (GenBank) group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D NLK58_19955 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D NLK58_15275 protein kinase K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1] D NLK58_03280 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NLK58_04745 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NLK58_14880 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NLK58_15130 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D NLK58_04875 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D NLK58_02805 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D NLK58_11720 HD-GYP domain-containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D NLK58_07880 MBL fold metallo-hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D NLK58_06755 endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D NLK58_11715 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NLK58_17610 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D NLK58_15595 alpha/beta fold hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D NLK58_12915 def; (GenBank) peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D NLK58_06625 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D NLK58_04845 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D NLK58_04130 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D NLK58_05120 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D NLK58_03695 FAD-binding oxidoreductase K27855 cndG; 1'-carboxy-chondrochloren decarboxylase [EC:4.1.1.129] D NLK58_18825 oleate hydratase K10254 ohyA; oleate hydratase [EC:4.2.1.53] D NLK58_06885 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D NLK58_20465 methylmalonyl-CoA mutase family protein K20906 hcmA; 2-hydroxyisobutanoyl-CoA mutase large subunit [EC:5.4.99.64] D NLK58_20450 cobalamin B12-binding domain-containing protein K20907 hcmB; 2-hydroxyisobutanoyl-CoA mutase small subunit [EC:5.4.99.64] D NLK58_17955 mpl; (GenBank) UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D NLK58_11870 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1] D NLK58_00235 rsxD; (GenBank) electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D NLK58_00240 rsxC; (GenBank) electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D NLK58_00245 rsxB; (GenBank) electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D NLK58_05040 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D NLK58_05035 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D NLK58_05030 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D NLK58_05025 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D NLK58_05020 nqrE; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D NLK58_05015 nqrF; (GenBank) NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D NLK58_04315 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D NLK58_09345 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D NLK58_09420 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] C 99981 Carbohydrate metabolism D NLK58_15980 sfsA; (GenBank) DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D NLK58_08595 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D NLK58_08600 LutB/LldF family L-lactate oxidation iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D NLK58_08605 lactate utilization protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D NLK58_12480 fdhD; (GenBank) formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D NLK58_15110 formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein D NLK58_17195 ferredoxin family protein K05524 fdxA; ferredoxin D NLK58_19555 ferredoxin family protein K05524 fdxA; ferredoxin D NLK58_00230 rsxG; (GenBank) electron transport complex subunit RsxG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D NLK58_00225 electron transport complex subunit E K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D NLK58_00250 rsxA; (GenBank) electron transport complex subunit RsxA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D NLK58_09055 nitric oxide reductase activation protein NorD K02448 norD; nitric oxide reductase NorD protein D NLK58_09590 VWA domain-containing protein K02448 norD; nitric oxide reductase NorD protein D NLK58_09030 cytochrome c oxidase subunit 3 family protein K02164 norE; nitric oxide reductase NorE protein D NLK58_09595 cytochrome c oxidase subunit 3 K02164 norE; nitric oxide reductase NorE protein D NLK58_09050 CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein D NLK58_09610 CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein D NLK58_15505 NapC/NirT family cytochrome c K02569 napC; NapC/NirT family cytochrome c D NLK58_02785 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit D NLK58_09625 cytochrome c K19344 nirC; cytochrome c55X D NLK58_09620 protein nirF K19345 nirF; protein NirF D NLK58_07285 dodecin family protein K09165 K09165; dodecin C 99983 Lipid metabolism D NLK58_11295 isovaleryl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D NLK58_11475 cysZ; (GenBank) sulfate transporter CysZ K06203 cysZ; CysZ protein D NLK58_15710 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D NLK58_00825 LapA family protein K08992 lapA; lipopolysaccharide assembly protein A D NLK58_00830 lapB; (GenBank) lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B D NLK58_08630 flippase-like domain-containing protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D NLK58_15445 heme biosynthesis protein HemY K02498 hemY; HemY protein D NLK58_09655 nirJ; (GenBank) heme d1 biosynthesis radical SAM protein NirJ K24868 nirJ; heme d1 biosynthesis protein D NLK58_10595 ubiB; (GenBank) ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D NLK58_10590 SCP2 sterol-binding domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D NLK58_15650 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D NLK58_15100 mobB; (GenBank) molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others D NLK58_12840 DoxX family protein K15977 K15977; putative oxidoreductase D NLK58_19145 DoxX family protein K15977 K15977; putative oxidoreductase D NLK58_02595 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase D NLK58_20335 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D NLK58_04030 cold-shock protein K03704 cspA; cold shock protein D NLK58_11455 cold-shock protein K03704 cspA; cold shock protein D NLK58_18870 cold-shock protein K03704 cspA; cold shock protein D NLK58_20040 cold shock domain-containing protein K03704 cspA; cold shock protein D NLK58_15375 rsd; (GenBank) sigma D regulator K07740 rsd; regulator of sigma D D NLK58_15645 glnK; (GenBank) P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2 D NLK58_15350 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D NLK58_05975 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D NLK58_06310 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D NLK58_06375 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein D NLK58_09400 MBL fold metallo-hydrolase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D NLK58_04160 clpS; (GenBank) ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D NLK58_04660 tig; (GenBank) trigger factor K03545 tig; trigger factor D NLK58_03525 hypothetical protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D NLK58_17555 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D NLK58_08520 ureE; (GenBank) urease accessory protein UreE K03187 ureE; urease accessory protein D NLK58_08515 urease accessory protein UreF K03188 ureF; urease accessory protein D NLK58_08510 ureG; (GenBank) urease accessory protein UreG K03189 ureG; urease accessory protein D NLK58_08540 urease accessory protein UreD K03190 ureD; urease accessory protein D NLK58_08505 HupE/UreJ family protein K03192 ureJ; urease accessory protein D NLK58_10300 smpB; (GenBank) SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D NLK58_08010 HypC/HybG/HupF family hydrogenase formation chaperone K04653 hypC; hydrogenase expression/formation protein HypC D NLK58_08005 hypD; (GenBank) hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D NLK58_08000 hypE; (GenBank) hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D NLK58_08015 hypF; (GenBank) carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D NLK58_15655 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D NLK58_03405 2OG-Fe(II) oxygenase K07394 K07394; SM-20-related protein D NLK58_14795 proteasome-type protease K07395 K07395; putative proteasome-type protease D NLK58_11145 OsmC family protein K07397 yhfA; putative redox protein D NLK58_02945 nfuA; (GenBank) Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D NLK58_00095 XdhC family protein K07402 xdhC; xanthine dehydrogenase accessory factor D NLK58_12570 nodulation protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D NLK58_13275 DUF1156 domain-containing protein K07445 K07445; putative DNA methylase D NLK58_11210 radC; (GenBank) DNA repair protein RadC K03630 radC; DNA repair protein RadC D NLK58_19920 rmuC; (GenBank) DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D NLK58_17655 YraN family protein K07460 yraN; putative endonuclease D NLK58_07115 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D NLK58_12905 dprA; (GenBank) DNA-processing protein DprA K04096 smf; DNA processing protein D NLK58_03065 replication-associated recombination protein A K07478 ycaJ; putative ATPase D NLK58_13415 ISNCY family transposase K07481 K07481; transposase, IS5 family D NLK58_15250 ISNCY family transposase K07481 K07481; transposase, IS5 family D NLK58_16475 ISNCY family transposase K07481 K07481; transposase, IS5 family D NLK58_14930 IS66 family transposase K07484 K07484; transposase D NLK58_15850 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D NLK58_15855 IS66 family transposase K07484 K07484; transposase D NLK58_17020 IS66 family transposase K07484 K07484; transposase D NLK58_17025 tnpB; (GenBank) IS66 family insertion sequence element accessory protein TnpB K07484 K07484; transposase D NLK58_17045 IS66 family transposase K07484 K07484; transposase D NLK58_08665 ISL3 family transposase K07485 K07485; transposase D NLK58_05910 transposase K07491 rayT; REP-associated tyrosine transposase D NLK58_00545 IS3 family transposase K07497 K07497; putative transposase D NLK58_05725 IS3 family transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D NLK58_03390 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D NLK58_08425 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein D NLK58_19895 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family D NLK58_11315 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D NLK58_04785 putP; (GenBank) sodium/proline symporter PutP K03307 TC.SSS; solute:Na+ symporter, SSS family D NLK58_07310 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D NLK58_10295 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D NLK58_14405 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D NLK58_08370 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D NLK58_14375 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family C 99978 Cell growth D NLK58_09080 hemerythrin domain-containing protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D NLK58_08825 SpoVR family protein K06415 spoVR; stage V sporulation protein R D NLK58_09855 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator C 99993 Cell motility D NLK58_02175 lpoB; (GenBank) penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator C 99995 Signaling proteins D NLK58_00335 histidine kinase K03807 ampE; AmpE protein D NLK58_01465 universal stress protein K06149 uspA; universal stress protein A D NLK58_18865 universal stress protein K14061 uspF; universal stress protein F D NLK58_16480 typA; (GenBank) translational GTPase TypA K06207 typA; GTP-binding protein D NLK58_15620 ChrR family anti-sigma-E factor K07167 chrR; putative transcriptional regulator D NLK58_06710 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D NLK58_18215 PhoH family protein K07175 phoH2; PhoH-like ATPase D NLK58_08815 PrkA family serine protein kinase K07180 prkA; serine protein kinase D NLK58_14510 DUF294 nucleotidyltransferase-like domain-containing protein K07182 K07182; CBS domain-containing protein D NLK58_04885 TIGR04211 family SH3 domain-containing protein K07184 ygiM; SH3 domain protein D NLK58_14560 AAA family ATPase K08482 kaiC; circadian clock protein KaiC D NLK58_05660 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D NLK58_03070 lolA; (GenBank) outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein D NLK58_18115 lolB; (GenBank) lipoprotein insertase outer membrane protein LolB K02494 lolB; outer membrane lipoprotein LolB D NLK58_03275 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D NLK58_20125 OmpH family outer membrane protein K06142 hlpA; outer membrane protein D NLK58_00205 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD D NLK58_06015 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein D NLK58_06170 hypothetical protein K07266 kpsC; capsular polysaccharide export protein D NLK58_13735 outer membrane beta-barrel protein K07275 ompW; outer membrane protein D NLK58_08645 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D NLK58_09895 AsmA family protein K07289 asmA; AsmA protein D NLK58_04375 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D NLK58_05170 ccmE; (GenBank) cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D NLK58_05150 ccmI; (GenBank) c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D NLK58_05155 cytochrome c-type biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D NLK58_01370 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D NLK58_11510 phoU; (GenBank) phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D NLK58_15310 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D NLK58_03755 glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D NLK58_08920 nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein D NLK58_02485 copper resistance protein B K07233 pcoB; copper resistance protein B D NLK58_09290 copper resistance protein B K07233 pcoB; copper resistance protein B D NLK58_09525 copper resistance protein B K07233 pcoB; copper resistance protein B D NLK58_09690 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO D NLK58_09740 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO D NLK58_08905 nitrous oxide reductase accessory protein NosL K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D NLK58_03090 CvpA family protein K03558 cvpA; membrane protein required for colicin V production D NLK58_06475 glucosaminidase domain-containing protein K03796 bax; Bax protein D NLK58_07640 phenylacetic acid degradation protein PaaY K02617 paaY; phenylacetic acid degradation protein D NLK58_10440 pqqA; (GenBank) pyrroloquinoline quinone precursor peptide PqqA K06135 pqqA; pyrroloquinoline quinone biosynthesis protein A D NLK58_10435 pqqB; (GenBank) pyrroloquinoline quinone biosynthesis protein PqqB K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D NLK58_08995 pqqD; (GenBank) pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D NLK58_10425 pqqD; (GenBank) pyrroloquinoline quinone biosynthesis peptide chaperone PqqD K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D NLK58_03180 patatin-like phospholipase family protein K07001 K07001; NTE family protein D NLK58_08185 patatin-like phospholipase family protein K07001 K07001; NTE family protein D NLK58_15575 patatin-like phospholipase family protein K07001 K07001; NTE family protein D NLK58_16740 patatin-like phospholipase family protein K07001 K07001; NTE family protein D NLK58_16065 erpA; (GenBank) iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D NLK58_09790 iron-sulfur cluster assembly accessory protein K05997 sufA; Fe-S cluster assembly protein SufA D NLK58_09770 sufB; (GenBank) Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D NLK58_09780 sufD; (GenBank) Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D NLK58_08800 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D NLK58_05630 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D NLK58_09800 SufE family protein K02426 sufE; cysteine desulfuration protein SufE D NLK58_08650 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D NLK58_04185 hflD; (GenBank) high frequency lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D NLK58_09550 cytochrome c oxidase assembly protein K02351 K02351; putative membrane protein D NLK58_05595 LemA family protein K03744 lemA; LemA protein D NLK58_19255 LemA family protein K03744 lemA; LemA protein D NLK58_20045 SlyX family protein K03745 slyX; SlyX protein D NLK58_03095 SPOR domain-containing protein K03749 dedD; DedD protein D NLK58_16825 SPOR domain-containing protein K03112 damX; DamX protein D NLK58_00200 DUF368 domain-containing protein K08974 K08974; putative membrane protein D NLK58_04370 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein D NLK58_19245 TPM domain-containing protein K08988 K08988; putative membrane protein D NLK58_18800 zinc ribbon domain-containing protein YjdM K06193 phnA; protein PhnA C 99997 Function unknown D NLK58_11670 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D NLK58_12510 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D NLK58_19250 TPM domain-containing protein K06872 K06872; uncharacterized protein D NLK58_02825 phosphohydrolase K06885 K06885; uncharacterized protein D NLK58_10155 alpha/beta hydrolase K06889 K06889; uncharacterized protein D NLK58_11835 ATP-binding protein K06923 K06923; uncharacterized protein D NLK58_13950 CoA-binding protein K06929 K06929; uncharacterized protein D NLK58_20475 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D NLK58_02850 FAD-dependent oxidoreductase K06954 K06954; uncharacterized protein D NLK58_13860 succinylglutamate desuccinylase/aspartoacylase family protein K06987 K06987; uncharacterized protein D NLK58_18170 M14 family metallopeptidase K06987 K06987; uncharacterized protein D NLK58_04360 C39 family peptidase K06992 K06992; uncharacterized protein D NLK58_10790 C39 family peptidase K06992 K06992; uncharacterized protein D NLK58_09445 MMPL family transporter K07003 K07003; uncharacterized protein D NLK58_19670 MMPL family transporter K07003 K07003; uncharacterized protein D NLK58_12610 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein D NLK58_00905 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein D NLK58_15990 AAA family ATPase K07028 K07028; uncharacterized protein D NLK58_13590 VOC family protein K07032 K07032; uncharacterized protein D NLK58_04870 YecA family protein K07039 K07039; uncharacterized protein D NLK58_12165 metal-dependent hydrolase K07044 K07044; uncharacterized protein D NLK58_19535 metal-dependent hydrolase K07044 K07044; uncharacterized protein D NLK58_02195 amidohydrolase family protein K07045 K07045; uncharacterized protein D NLK58_06270 putative toxin-antitoxin system toxin component, PIN family K07063 K07063; uncharacterized protein D NLK58_01890 type II toxin-antitoxin system VapC family toxin K07064 K07064; uncharacterized protein D NLK58_12855 YheV family putative metal-binding protein K07070 K07070; uncharacterized protein D NLK58_01425 TIGR01777 family oxidoreductase K07071 K07071; uncharacterized protein D NLK58_05860 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein D NLK58_08680 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein D NLK58_19235 FAD-dependent oxidoreductase K07077 K07077; uncharacterized protein D NLK58_04780 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D NLK58_18190 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D NLK58_19675 TAXI family TRAP transporter solute-binding subunit K07080 K07080; uncharacterized protein D NLK58_04770 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NLK58_07395 TSUP family transporter K07090 K07090; uncharacterized protein D NLK58_14330 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NLK58_17810 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein D NLK58_10380 metallophosphoesterase K07098 K07098; uncharacterized protein D NLK58_12310 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NLK58_12450 YeeE/YedE family protein K07112 K07112; uncharacterized protein D NLK58_17660 penicillin-binding protein activator K07121 K07121; uncharacterized protein D NLK58_07990 SDR family oxidoreductase K07124 K07124; uncharacterized protein D NLK58_11795 MAPEG family protein K07136 K07136; uncharacterized protein D NLK58_13700 NAD(P)/FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D NLK58_01450 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein D NLK58_17865 LON peptidase substrate-binding domain-containing protein K07157 K07157; uncharacterized protein D NLK58_13100 yidD; (GenBank) membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D NLK58_07935 DsrE family protein K09004 K09004; uncharacterized protein D NLK58_02685 DUF192 domain-containing protein K09005 K09005; uncharacterized protein D NLK58_08180 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D NLK58_00745 amrA; (GenBank) AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein D NLK58_17925 DUF493 domain-containing protein K09158 K09158; uncharacterized protein D NLK58_03370 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D NLK58_02855 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein D NLK58_11300 DUF503 domain-containing protein K09764 K09764; uncharacterized protein D NLK58_18790 YaiI/YqxD family protein K09768 K09768; uncharacterized protein D NLK58_04880 YciI family protein K09780 K09780; uncharacterized protein D NLK58_10630 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D NLK58_08820 YeaH/YhbH family protein K09786 K09786; uncharacterized protein D NLK58_08885 YbaN family protein K09790 K09790; uncharacterized protein D NLK58_04065 Trm112 family protein K09791 K09791; uncharacterized protein D NLK58_04325 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein D NLK58_02105 DUF465 domain-containing protein K09794 K09794; uncharacterized protein D NLK58_09865 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein D NLK58_10285 RnfH family protein K09801 K09801; uncharacterized protein D NLK58_00685 BrnT family toxin K09803 K09803; uncharacterized protein D NLK58_00720 BrnT family toxin K09803 K09803; uncharacterized protein D NLK58_05220 BrnT family toxin K09803 K09803; uncharacterized protein D NLK58_11990 BrnT family toxin K09803 K09803; uncharacterized protein D NLK58_05470 SIMPL domain-containing protein K09807 K09807; uncharacterized protein D NLK58_05005 nqrM; (GenBank) (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein D NLK58_02090 DUF2309 domain-containing protein K09822 K09822; uncharacterized protein D NLK58_02165 hypothetical protein K09859 K09859; uncharacterized protein D NLK58_20350 yaaA; (GenBank) peroxide stress protein YaaA K09861 K09861; uncharacterized protein D NLK58_06460 yacG; (GenBank) DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D NLK58_00270 YjaG family protein K09891 K09891; uncharacterized protein D NLK58_10650 UPF0149 family protein K09895 K09895; uncharacterized protein D NLK58_03375 YcgL domain-containing protein K09902 K09902; uncharacterized protein D NLK58_06505 YhcB family protein K09908 K09908; uncharacterized protein D NLK58_00420 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein D NLK58_19645 YeaC family protein K09916 K09916; uncharacterized protein D NLK58_02095 YebG family protein K09918 K09918; uncharacterized protein D NLK58_07275 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein D NLK58_16695 DUF1249 domain-containing protein K09920 K09920; uncharacterized protein D NLK58_15540 DUF484 family protein K09921 K09921; uncharacterized protein D NLK58_04310 FixH family protein K09926 K09926; uncharacterized protein D NLK58_04095 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein D NLK58_20285 TIGR04282 family arsenosugar biosynthesis glycosyltransferase K09931 K09931; uncharacterized protein D NLK58_00295 DUF2066 domain-containing protein K09938 K09938; uncharacterized protein D NLK58_07325 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein D NLK58_18255 DUF1244 domain-containing protein K09948 K09948; uncharacterized protein D NLK58_02245 ACT domain-containing protein K09964 K09964; uncharacterized protein D NLK58_11680 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein D NLK58_02185 DUF1989 domain-containing protein K09967 K09967; uncharacterized protein D NLK58_10450 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D NLK58_10455 urea carboxylase-associated family protein K09967 K09967; uncharacterized protein D NLK58_20020 DUF1853 family protein K09977 K09977; uncharacterized protein D NLK58_18970 YdbL family protein K09978 K09978; uncharacterized protein D NLK58_02800 DUF1285 domain-containing protein K09986 K09986; uncharacterized protein D NLK58_03350 VWA domain-containing protein K09989 K09989; uncharacterized protein D NLK58_20265 metal-sensing transcriptional repressor K07807 K07807; uncharacterized protein D NLK58_16665 mitochondrial fission ELM1 family protein K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 6, 2025