+F Repair protein KO
#
DNA Repair and Recombination Proteins - Mercenaria mercenaria (northern quahog)
%
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 123564285 methylated-DNA--protein-cysteine methyltransferase-like K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D 123534843 DNA oxidative demethylase ALKBH2-like K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 123552565 alpha-ketoglutarate-dependent dioxygenase alkB homolog 3-like K10860 ALKBH3; mRNA N1-methyladenine demethylase [EC:1.14.11.54]
D 123551044 activating signal cointegrator 1 complex subunit 3-like K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 123556121 deoxyribodipyrimidine photo-lyase-like K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 123531805 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 123538024 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 123546984 uracil-DNA glycosylase-like isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 123565853 cyclin-O protein A-like isoform X1 K10861 UDG2; uracil-DNA glycosylase 2 [EC:3.2.2.-]
E 123564147 DNA-3-methyladenine glycosylase-like K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 123524932 adenine DNA glycosylase-like isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 123555341 N-glycosylase/DNA lyase-like K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 123566438 endonuclease 8-like 1 K10567 NEIL1; endonuclease VIII-like 1 [EC:3.2.2.- 4.2.99.18]
E 123557867 endonuclease 8-like 3 K10569 NEIL3; endonuclease VIII-like 3 [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 123551510 DNA-(apurinic or apyrimidinic site) endonuclease-like isoform X1 K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E 128556318 DNA-(apurinic or apyrimidinic site) endonuclease-like isoform X1 K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E 123528872 DNA-(apurinic or apyrimidinic site) endonuclease 2-like isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 123535687 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 123565060 DNA polymerase delta subunit 2-like K02328 POLD2; DNA polymerase delta subunit 2
F 123553759 DNA polymerase delta subunit 3-like K03504 POLD3; DNA polymerase delta subunit 3
F 123533661 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 123559649 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 123526825 DNA polymerase epsilon subunit 2-like K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 128550287 DNA polymerase epsilon subunit 2-like K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 123548686 DNA polymerase epsilon subunit 3-like K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F 123564590 DNA polymerase epsilon subunit 4-like K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E 123563210 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 123550149 flap endonuclease 1-like K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 128557717 flap endonuclease 1-like K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 123563673 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 123563104 DNA polymerase beta-like K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
E 123533686 DNA repair protein XRCC1-like isoform X1 K10803 XRCC1; DNA-repair protein XRCC1
E 123527745 DNA ligase 3-like K10776 LIG3; DNA ligase 3 [EC:6.5.1.1]
D Other BER factors
E 123541889 tyrosyl-DNA phosphodiesterase 1-like K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 123538359 aprataxin-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 123533994 aprataxin and PNK-like factor K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
E 123525568 bifunctional polynucleotide phosphatase/kinase-like K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 123536382 bifunctional polynucleotide phosphatase/kinase-like isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 123556335 high mobility group protein B2-like K10802 HMGB1; high mobility group protein B1
E 123547395 DNA polymerase lambda-like isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 123545029 poly [ADP-ribose] polymerase 1-like K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 123548792 poly [ADP-ribose] polymerase 2-like K28005 PARP2; poly [ADP-ribose] polymerase 2 [EC:2.4.2.30]
E 123529434 protein mono-ADP-ribosyltransferase PARP3-like K10798 PARP3_4; protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
E 123533425 uncharacterized protein LOC123533425 K10798 PARP3_4; protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
E 123553036 protein mono-ADP-ribosyltransferase PARP4-like K10798 PARP3_4; protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 123529916 DNA repair protein complementing XP-C cells-like K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 123524017 UV excision repair protein RAD23 homolog B-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 123557832 E3 ubiquitin-protein ligase RBX1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 123554074 cullin-4A-like K10609 CUL4; cullin 4
F 123537643 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 123527685 DNA damage-binding protein 2-like K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 123554921 DNA-directed RNA polymerase II subunit RPB1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 123546580 DNA-directed RNA polymerase II subunit RPB2 isoform X1 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 123549086 DNA-directed RNA polymerase II subunit RPB3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 128557687 DNA-directed RNA polymerase II subunit RPB3-like K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 123527558 DNA-directed RNA polymerase II subunit RPB4-like K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 123524342 DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 123551828 DNA-directed RNA polymerases I, II, and III subunit RPABC2-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 123559527 DNA-directed RNA polymerase II subunit RPB7 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 123559369 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 123529325 DNA-directed RNA polymerase II subunit RPB9-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 123533939 DNA-directed RNA polymerase II subunit RPB11-a-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F 123557832 E3 ubiquitin-protein ligase RBX1 K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 123554074 cullin-4A-like K10609 CUL4; cullin 4
F 123537643 DNA damage-binding protein 1-like K10610 DDB1; DNA damage-binding protein 1
F 123524027 DNA excision repair protein ERCC-8-like K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 123563732 DNA excision repair protein ERCC-6-like K10841 ERCC6; DNA excision repair protein ERCC-6
F 123525038 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 123531569 general transcription and DNA repair factor IIH helicase subunit XPB-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 123523782 general transcription and DNA repair factor IIH helicase subunit XPD-like isoform X1 K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 123537332 general transcription factor IIH subunit 1-like K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 123526536 general transcription factor IIH subunit 2-like K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 123534338 general transcription factor IIH subunit 3-like K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 123552310 general transcription factor IIH subunit 4-like K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 123565821 cyclin-dependent kinase 7-like K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 123533617 cyclin-H-like K06634 CCNH; cyclin H
E 128557058 CDK-activating kinase assembly factor MAT1-like K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 123533998 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 123525559 replication protein A 32 kDa subunit-B-like K10739 RFA2; replication factor A2
E 123531594 uncharacterized protein LOC123531594 K10740 RPA3; replication factor A3
D Other NER factors
E 123566470 DNA repair protein complementing XP-A cells homolog K10847 XPA; DNA-repair protein complementing XP-A cells
E 123525037 DNA repair endonuclease XPF-like isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 123553760 LOW QUALITY PROTEIN: DNA excision repair protein ERCC-5-like K10846 ERCC5; DNA excision repair protein ERCC-5
E 123563673 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 123546617 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 123561628 probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog isoform X1 K24730 CIAO1; cytosolic iron-sulfur protein assembly protein CIAO1
E 123523159 cytosolic iron-sulfur assembly component 2A-like K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E 123549663 cytosolic iron-sulfur assembly component 2B-like K26403 CIAO2; cytosolic iron-sulfur assembly component 2
E 128558584 cullin-3-like K03869 CUL3; cullin 3
E 123551652 cullin-5-like isoform X1 K10612 CUL5; cullin 5
E 123525274 elongin-C K03872 ELOC; elongin-C
E 123533666 elongin-B-like K03873 ELOB; elongin-B
E 123565981 protein lingerer-like K26545 UBAP2; ubiquitin-associated protein 2
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 123551025 DNA mismatch repair protein Msh2-like K08735 MSH2; DNA mismatch repair protein MSH2
E 123565548 DNA mismatch repair protein Msh3-like isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 123566648 DNA mismatch repair protein Msh6-like isoform X2 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 123532010 PMS1 protein homolog 1-like K10864 PMS1; DNA mismatch repair protein PMS1
E 123532148 DNA mismatch repair protein Mlh1-like K08734 MLH1; DNA mismatch repair protein MLH1
E 123563409 mismatch repair endonuclease PMS2-like K10858 PMS2; DNA mismatch repair protein PMS2
D DNA polymerase delta complex
E 123535687 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 123565060 DNA polymerase delta subunit 2-like K02328 POLD2; DNA polymerase delta subunit 2
E 123553759 DNA polymerase delta subunit 3-like K03504 POLD3; DNA polymerase delta subunit 3
E 123533661 DNA polymerase delta subunit 4-like K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 123533998 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 123525559 replication protein A 32 kDa subunit-B-like K10739 RFA2; replication factor A2
E 123531594 uncharacterized protein LOC123531594 K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 123533755 LOW QUALITY PROTEIN: replication factor C subunit 2-like K10755 RFC2_4; replication factor C subunit 2/4
E 123554189 replication factor C subunit 4-like K10755 RFC2_4; replication factor C subunit 2/4
E 123534327 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
E 123556830 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 123563210 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 123526144 exonuclease 1-like K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 123556335 high mobility group protein B2-like K10802 HMGB1; high mobility group protein B1
E 123563673 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 123537225 WD repeat-containing protein 76-like K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 123563525 double-strand break repair protein MRE11-like isoform X2 K10865 MRE11; double-strand break repair protein MRE11
E 123557604 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 123558527 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 123548711 nibrin-like K10867 NBN; nibrin
D BRCA1-core complex
E 123531670 BRCA1-associated RING domain protein 1-like K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 123547242 BRCA1-A complex subunit Abraxas 1-like K20774 FAM175A; BRCA1-A complex subunit Abraxas
E 123524257 BRISC and BRCA1-A complex member 1-like isoform X1 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 123525423 BRISC and BRCA1-A complex member 2-like K12173 BRE; BRCA1-A complex subunit BRE
E 128550756 lys-63-specific deubiquitinase BRCC36-like K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 123533774 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 123560779 DNA topoisomerase 2-binding protein 1-A-like K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 123541222 uncharacterized protein LOC123541222 K20773 RBBP8; DNA endonuclease RBBP8 [EC:3.1.-.-]
E 123563525 double-strand break repair protein MRE11-like isoform X2 K10865 MRE11; double-strand break repair protein MRE11
E 123557604 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 123558527 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 123548711 nibrin-like K10867 NBN; nibrin
D BRCA complex
E 123565454 uncharacterized protein LOC123565454 K08775 BRCA2; breast cancer 2 susceptibility protein
E 123526459 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 123526459 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 123535191 DNA repair protein RAD51 homolog 3-like isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 123534476 DNA repair protein RAD51 homolog 4-like isoform X1 K10871 RAD51L3; RAD51-like protein 3
E 123535044 DNA repair protein XRCC2-like K10879 XRCC2; DNA-repair protein XRCC2
E 123545350 DNA repair protein XRCC3-like K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 123529306 uncharacterized protein LOC123529306 isoform X1 K10873 RAD52; DNA repair and recombination protein RAD52
E 123541223 RAD52 motif-containing protein 1-like K10874 RDM1; RAD52 motif-containing protein 1
D Rad54 family proteins
E 123525119 DNA repair and recombination protein RAD54-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 123530438 helicase ARIP4-like K10876 RAD54L2; RAD54-like protein 2 [EC:5.6.2.-]
E 123564569 DNA repair and recombination protein RAD54B-like K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E 123530778 bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN-like K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 123565521 recQ-like DNA helicase BLM K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 123548927 ATP-dependent DNA helicase Q4-like isoform X1 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
E 123558506 ATP-dependent DNA helicase Q5-like K10902 RECQL5; ATP-dependent DNA helicase Q5 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 123565521 recQ-like DNA helicase BLM K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 123536025 LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 123563720 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 123523894 recQ-mediated genome instability protein 2-like K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 123533998 replication protein A 70 kDa DNA-binding subunit-like K07466 RFA1; replication factor A1
E 123525559 replication protein A 32 kDa subunit-B-like K10739 RFA2; replication factor A2
E 123531594 uncharacterized protein LOC123531594 K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 123533701 serine/threonine-protein phosphatase 4 catalytic subunit K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 123548656 serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1 K15424 PPP4R1; serine/threonine-protein phosphatase 4 regulatory subunit 1
E 123529271 serine/threonine-protein phosphatase 4 regulatory subunit 2-B-like K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 123527803 serine/threonine-protein phosphatase 4 regulatory subunit 3A-like isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 123534620 serine/threonine-protein phosphatase 4 regulatory subunit 4-like K15426 PPP4R4; serine/threonine-protein phosphatase 4 regulatory subunit 4
D AP-5 complex
E 123566369 AP-5 complex subunit beta-1-like isoform X1 K19022 AP5B1; AP-5 complex subunit beta-1
E 123525975 AP-5 complex subunit mu-1-like isoform X1 K19023 AP5M1; AP-5 complex subunit mu-1
E 123547414 AP-5 complex subunit sigma-1-like K19024 AP5S1; AP-5 complex subunit sigma-1
E 123563842 AP-5 complex subunit zeta-1-like K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 123525483 structural maintenance of chromosomes protein 5-like K22803 SMC5; structural maintenance of chromosomes protein 5
E 123524626 structural maintenance of chromosomes protein 6-like isoform X1 K22804 SMC6; structural maintenance of chromosomes protein 6
E 123525556 non-structural maintenance of chromosomes element 1 homolog K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 123528457 E3 SUMO-protein ligase NSE2-like isoform X2 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 123533216 non-structural maintenance of chromosomes element 3 homolog K22823 NSMCE3; non-structural maintenance of chromosomes element 3
E 123525321 uncharacterized protein LOC123525321 isoform X1 K26126 SLF1; SMC5-SMC6 complex localization factor protein 1
D Other HR factors
E 123562257 crossover junction endonuclease EME1-like K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 123547355 exonuclease 3'-5' domain-containing protein 2-like K20777 EXD2; exonuclease 3'-5' domain-containing protein 2 [EC:3.1.11.1]
E 123525538 crossover junction endonuclease MUS81-like K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 123559422 26S proteasome complex subunit SEM1-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 123552627 DNA repair protein SWI5 homolog K10991 SWI5; DNA repair protein Swi5/Sae3
E 123548664 structure-specific endonuclease subunit slx1-like K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 123556832 structure-specific endonuclease subunit SLX4-like K10484 BTBD12; structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
E 123536104 uncharacterized protein LOC123536104 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 123566611 spatacsin-like isoform X1 K19026 SPG11; spatacsin
E 123542085 zinc finger FYVE domain-containing protein 26-like K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 123561347 mortality factor 4-like protein 1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 123536304 uncharacterized protein LOC123536304 isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123543035 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123549430 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123549735 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123549737 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123549739 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123549753 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123550336 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123556476 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123556478 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123556479 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123560985 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123560986 deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 123563717 fidgetin-like protein 1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 123549466 DNA repair-scaffolding protein-like K22806 SPIDR; DNA repair-scaffolding protein
E 123561661 cilia- and flagella-associated protein 410-like isoform X1 K23456 CFAP410; cilla- and flagella-associated protein
E 123541934 hepatoma-derived growth factor-related protein 2-like K25065 HDGFL2; hepatoma-derived growth factor-related protein 2
E 123534329 zinc finger SWIM domain-containing protein 7-like K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 123551489 ATPase SWSAP1-like K25771 SWSAP1; ATPase SWSAP1
E 123554247 BRCA2-interacting transcriptional repressor EMSY-like K25790 EMSY; BRCA2-interacting transcriptional repressor EMSY
E 123552900 protein MMS22-like isoform X1 K26125 MMS22L; protein MMS22-like
E 123550495 tonsoku-like protein K09257 NFKBIL2; NF-kappa-B inhibitor-like protein 2
E 123525840 PCNA-interacting partner-like K27412 PARPBP; PCNA-interacting partner
E 123529056 uncharacterized protein LOC123529056 K27803 HROB; homologous recombination OB-fold protein
E 123544792 DNA helicase MCM8-like K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
E 128550074 DNA helicase MCM8-like K10737 MCM8; DNA helicase MCM8 [EC:5.6.2.4]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 128550097 X-ray repair cross-complementing protein 5-like K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 123561223 X-ray repair cross-complementing protein 5-like K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 123563525 double-strand break repair protein MRE11-like isoform X2 K10865 MRE11; double-strand break repair protein MRE11
E 123557604 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 123558527 DNA repair protein RAD50-like K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 123523820 DNA ligase 4-like K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 123535623 DNA repair protein XRCC4-like K10886 XRCC4; DNA-repair protein XRCC4
E 123561492 non-homologous end-joining factor 1-like K10980 NHEJ1; non-homologous end-joining factor 1
D X-family DNA polymerases
E 123547395 DNA polymerase lambda-like isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 123546234 DNA nucleotidylexotransferase-like K03513 POLM; DNA polymerase mu [EC:2.7.7.7]
E 123563104 DNA polymerase beta-like K02330 POLB; DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 123538359 aprataxin-like K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 123533994 aprataxin and PNK-like factor K13295 APLF; aprataxin and PNK-like factor [EC:3.1.-.-]
E 123540152 tyrosyl-DNA phosphodiesterase 2-like K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 123541298 structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
E 123527438 uncharacterized protein LOC123527438 K25772 PAXX; protein PAXX
E 123564944 jmjC domain-containing protein 8-like isoform X1 K25792 JMJD8; jumonji domain-containing protein 8
C FA (Fanconi anemia) pathway
D FA core complex
E 123537066 uncharacterized protein LOC123537066 K10892 FANCE; fanconi anemia group E protein
E 123552751 uncharacterized protein LOC123552751 K10894 FANCG; fanconi anemia group G protein
E 123526595 E3 ubiquitin-protein ligase FANCL-like K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 123533771 Fanconi anemia group M protein-like K10896 FANCM; fanconi anemia group M protein
E 123564577 Fanconi anemia core complex-associated protein 24-like K10898 FAAP24; fanconi anemia-associated protein
D FA core complex binding factors
E 123526249 protein hairy-like K06054 HES1; hairy and enhancer of split 1
E 123526895 transcription factor HES-2-like K06054 HES1; hairy and enhancer of split 1
E 123526896 enhancer of split mgamma protein-like K06054 HES1; hairy and enhancer of split 1
E 123527566 enhancer of split mgamma protein-like K06054 HES1; hairy and enhancer of split 1
E 123527567 transcription factor HES-4-B-like K06054 HES1; hairy and enhancer of split 1
E 123527896 hairy/enhancer-of-split related with YRPW motif protein 2-like K06054 HES1; hairy and enhancer of split 1
E 123528153 enhancer of split m7 protein-like K06054 HES1; hairy and enhancer of split 1
E 123528303 transcription factor HES-2-like K06054 HES1; hairy and enhancer of split 1
E 123528325 transcription factor HES-4-like K06054 HES1; hairy and enhancer of split 1
E 123535321 enhancer of split m8 protein-like K06054 HES1; hairy and enhancer of split 1
E 123528203 centromere protein S-like K11511 APITD1; centromere protein S
E 123563765 centromere protein X-like isoform X1 K15360 STRA13; centromere protein X
E 123537269 ubiquitin-conjugating enzyme E2 T-like isoform X1 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 123565521 recQ-like DNA helicase BLM K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 123536025 LOW QUALITY PROTEIN: DNA topoisomerase 3-beta-1-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 123563720 DNA topoisomerase 3-alpha-like K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 123523894 recQ-mediated genome instability protein 2-like K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 123529602 Fanconi anemia group D2 protein-like K10891 FANCD2; fanconi anemia group D2 protein
E 123547080 Fanconi anemia group I protein-like K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 123565454 uncharacterized protein LOC123565454 K08775 BRCA2; breast cancer 2 susceptibility protein
E 123533774 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 123551423 fanconi-associated nuclease 1-like K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 123526459 DNA repair protein RAD51 homolog A K04482 RAD51; DNA repair protein RAD51
E 123535191 DNA repair protein RAD51 homolog 3-like isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 123561971 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 123561482 ubiquitin carboxyl-terminal hydrolase 1-like K11832 USP1; ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
E 123540325 WD repeat-containing protein 48-like K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 123557039 serine/threonine-protein phosphatase 6 catalytic subunit K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 123552376 serine/threonine-protein phosphatase 6 regulatory subunit 3-like isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 123531822 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A-like isoform X1 K15502 ANKRD28; serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A
D Ubiquitin ligases
E 123530364 E3 ubiquitin-protein ligase RNF8-like isoform X1 K10667 RNF8; E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
E 123556108 E3 ubiquitin-protein ligase rnf168-like K20779 RNF168; E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
E 123558580 E3 ubiquitin-protein ligase HERC2-like K10595 HERC2; E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26]
D Others
E 123554761 telomerase Cajal body protein 1-like K23314 WRAP53; telomerase Cajal body protein 1
E 123526477 uncharacterized protein LOC123526477 K24688 ZCWPW1; zinc finger CW-type PWWP domain protein 1
E 123525361 WD repeat-containing protein 70-like isoform X1 K24752 WDR70; WD repeat-containing protein 70
E 123537225 WD repeat-containing protein 76-like K24755 WDR76; WD repeat-containing protein 76
E 128548806 abasic site processing protein HMCES-like K28434 HMCES; abasic site processing protein HMCES
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 123536827 DNA polymerase eta-like K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 123536833 DNA polymerase eta-like isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 123522965 DNA polymerase iota-like isoform X1 K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D 123523023 DNA polymerase kappa-like K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 123526814 DNA repair protein REV1-like K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
C A-family DNA polymerase
D 123547502 DNA polymerase nu-like isoform X1 K16618 POLN; DNA polymerase nu [EC:2.7.7.7]
C Rad6 epistasis group
D 123556955 ubiquitin-conjugating enzyme E2-17 kDa isoform X1 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 123539346 helicase-like transcription factor isoform X1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 123549647 ubiquitin-conjugating enzyme E2 variant 1-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 123530189 ubiquitin-conjugating enzyme E2 N K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 123563210 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
D 123525840 PCNA-interacting partner-like K27412 PARPBP; PCNA-interacting partner
D 123530480 DNA-dependent metalloprotease SPRTN-like K24051 SPRTN; SprT-like domain-contaning protein Spartan
D 123556949 dentin sialophosphoprotein-like K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D 123533620 cell cycle checkpoint control protein RAD9A-like isoform X1 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 123560409 checkpoint protein HUS1-like K10903 HUS1; HUS1 checkpoint protein
D 123534584 cell cycle checkpoint protein RAD1-like isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 123524601 cell cycle checkpoint protein RAD17-like K06662 HRAD17; cell cycle checkpoint protein
D 123533755 LOW QUALITY PROTEIN: replication factor C subunit 2-like K10755 RFC2_4; replication factor C subunit 2/4
D 123554189 replication factor C subunit 4-like K10755 RFC2_4; replication factor C subunit 2/4
D 123534327 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
D 123556830 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 123534584 cell cycle checkpoint protein RAD1-like isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 123560024 protein timeless homolog isoform X1 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 123566353 uncharacterized protein LOC123566353 K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D 123540912 claspin-like isoform X1 K25773 CLSPN; claspin
C Triple T complex
D 123561971 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 123526143 TELO2-interacting protein 1 homolog K20403 TTI1; TELO2-interacting protein 1
D 123523180 TELO2-interacting protein 2-like K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 123553282 large proline-rich protein BAG6-like K23390 BAG6; large proline-rich protein BAG6
D 123529126 ubiquitin-like protein 4A K23388 UBL4; ubiquitin-like protein 4
D 123563540 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 123525344 serine/threonine-protein kinase ATR-like K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 123551455 uncharacterized protein LOC123551455 isoform X1 K10905 ATRIP; ATR interacting protein
D 123527530 serine-protein kinase ATM-like K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 123551177 serine-protein kinase ATM-like K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 123554179 serine/threonine-protein kinase Chk1-like K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D 123533799 serine/threonine-protein kinase Chk2-like K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D 123531146 M-phase inducer phosphatase 1-like K06645 CDC25A; M-phase inducer phosphatase 1 [EC:3.1.3.48]
D 123531152 M-phase inducer phosphatase-like K06645 CDC25A; M-phase inducer phosphatase 1 [EC:3.1.3.48]
D 123533289 M-phase inducer phosphatase-like K06645 CDC25A; M-phase inducer phosphatase 1 [EC:3.1.3.48]
D 123530157 M-phase inducer phosphatase-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123531153 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123533288 M-phase inducer phosphatase-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123533290 M-phase inducer phosphatase-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123533292 M-phase inducer phosphatase-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123546142 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123546143 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123546269 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123546270 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123547227 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123547330 M-phase inducer phosphatase 3-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123547919 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123559034 M-phase inducer phosphatase 1-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123563881 M-phase inducer phosphatase-like K05866 CDC25B; M-phase inducer phosphatase 2 [EC:3.1.3.48]
D 123527130 14-3-3 protein beta/alpha-B-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 123527134 14-3-3-like protein K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 123531436 14-3-3 protein zeta-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 123531942 14-3-3 protein zeta-like K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta
D 123532915 14-3-3-like protein 2 K16198 YWHAG_H; 14-3-3 protein gamma/eta
D 123533769 uncharacterized protein LOC123533769 K06630 YWHAE; 14-3-3 protein epsilon
D 123552244 neuron navigator 3-like K19483 NAV2; neuron navigator 2 [EC:5.6.2.4]
D 123551694 wee1-like protein kinase 1-B K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 123526667 uncharacterized protein LOC123526667 isoform X1 K21944 PER1; period circadian protein 1
D 123525088 mediator of DNA damage checkpoint protein 1-like isoform X1 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 123536858 plastin-2-like K17336 PLS3; plastin-3
D 123529351 uncharacterized protein LOC123529351 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 123529993 serine/threonine-protein kinase Nek4-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 123532054 serine/threonine-protein kinase Nek4-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 123549660 serine/threonine-protein kinase Nek4-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 123555105 serine/threonine-protein kinase Nek1-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 123558112 serine/threonine-protein kinase Nek1-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 123531239 serine/threonine-protein kinase Nek10-like isoform X1 K20879 NEK10; serine/threonine-protein kinase Nek10 [EC:2.7.11.1]
D 123548572 serine/threonine-protein kinase Nek11-like K20880 NEK11; serine/threonine-protein kinase Nek11 [EC:2.7.11.1]
D 123551379 protein downstream neighbor of Son-like K22422 DONSON; protein downstream neighbor of Son
D 123525167 uncharacterized protein LOC123525167 isoform X1 K22808 KANK; KN motif and ankyrin repeat domain-containing protein
D 123548510 vacuolar protein sorting-associated protein 4B-like K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 123550659 vacuolar protein sorting-associated protein 4B-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 123555622 vacuolar protein sorting-associated protein 4B-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 123544124 abscission/NoCut checkpoint regulator-like K24778 ZFYVE19; abscission/NoCut checkpoint regulator
D 123544998 splicing regulator SDE2-like K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D 123550780 DNA polymerase theta-like K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 123535308 myb-binding protein 1A-like protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 123562444 DNA-directed primase/polymerase protein-like isoform X1 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 123560389 three-prime repair exonuclease 1-like K10790 TREX1; three prime repair exonuclease 1 [EC:3.1.11.2]
D 123529027 uncharacterized protein LOC123529027 K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 123533610 exonuclease V-like K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 123546837 endonuclease V-like isoform X1 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 123545086 LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3-like K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 123565473 uncharacterized protein LOC123565473 K21411 ANKLE1; ankyrin repeat and LEM domain-containing protein 1
C Helicases
D 123523704 uncharacterized protein LOC123523704 isoform X1 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 123533814 pre-mRNA-processing factor 19-like K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 123550799 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 123526564 pre-mRNA-splicing factor SPF27-like K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 123557856 pleiotropic regulator 1-like K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 123565386 nucleotide triphosphate diphosphatase NUDT15-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 123562798 oxidized purine nucleoside triphosphate hydrolase-like K17816 NUDT1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase [EC:3.6.1.55 3.6.1.56]
D 123552079 8-oxo-dGDP phosphatase NUDT18-like isoform X1 K17817 NUDT18; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D 123542210 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 123557554 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 123525277 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 123564285 methylated-DNA--protein-cysteine methyltransferase-like K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D 123556121 deoxyribodipyrimidine photo-lyase-like K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 123531805 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 123538024 uracil-DNA glycosylase-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 123546984 uracil-DNA glycosylase-like isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 123564147 DNA-3-methyladenine glycosylase-like K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 123524932 adenine DNA glycosylase-like isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 123529145 uncharacterized protein LOC123529145 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 123543330 ATP-dependent DNA helicase RecQ-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
F 123566701 protein unc-13 homolog A-like K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 123565386 nucleotide triphosphate diphosphatase NUDT15-like K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 123542210 deoxyuridine 5'-triphosphate nucleotidohydrolase-like K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: July 29, 2025