+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Marmota marmota marmota (Alpine marmot)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        107157993 Polr2a; DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        107139257 Polr2b; DNA-directed RNA polymerase II subunit RPB2 isoform X1	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        107149608 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        107144829 Polr2c; DNA-directed RNA polymerase II subunit RPB3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
D      Pol II specific subunits
E        107136797 Polr2d; DNA-directed RNA polymerase II subunit RPB4 isoform X2	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        107149293 DNA-directed RNA polymerase II subunit RPB4-like	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        107135931 Polr2g; DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        107151820 Polr2i; DNA-directed RNA polymerase II subunit RPB9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        125610327 Polr2m; protein GRINL1A	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        107157238 Polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107139869 Polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107145597 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107154327 Polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107142368 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107142833 Polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107144950 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107154336 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107142300 Polr2l; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        107137295 Gtf2a1l; TFIIA-alpha and beta-like factor isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        107149707 Gtf2a1; transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        107138058 Gtf2a2; transcription initiation factor IIA subunit 2 isoform X2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        107158261 Gtf2b; transcription initiation factor IIB isoform X2	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        107138299 Tbpl2; TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107153083 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107155540 Tbpl1; TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107155616 Taf1; transcription initiation factor TFIID subunit 1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        107142884 Taf2; transcription initiation factor TFIID subunit 2 isoform X2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        107150227 Taf3; transcription initiation factor TFIID subunit 3 isoform X1	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        107139568 Taf4b; transcription initiation factor TFIID subunit 4B isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        107154107 Taf4; transcription initiation factor TFIID subunit 4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        107149856 Taf5; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        107157893 Taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        107135932 Taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        107147105 Taf6; transcription initiation factor TFIID subunit 6 isoform X2	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        107141973 Taf7; transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        107156222 Taf7l; transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        107143909 Taf8; transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        107139429 Taf9; transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        107147422 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        107160941 Taf9b; transcription initiation factor TFIID subunit 9B isoform X1	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        107135607 Taf10; transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        107143821 Taf11; transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        107150751 transcription initiation factor TFIID subunit 11-like	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        107142048 Taf12; transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        107139233 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        107139397 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        107158629 Taf13; transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        125611277 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        125613635 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        107150336 Taf15; TATA-binding protein-associated factor 2N isoform X1	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      TFIIE
E        107143259 Gtf2e1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        107155359 Gtf2e2; transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        107157311 Gtf2f1; general transcription factor IIF subunit 1 isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        107141058 Gtf2f2; general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
E        107153319 general transcription factor IIF subunit 2-like	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        107158166 Gtf2h1; general transcription factor IIH subunit 1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        107139423 Gtf2h2c; general transcription factor IIH subunit 2-like protein isoform X2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        107156381 Gtf2h3; general transcription factor IIH subunit 3 isoform X1	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        107160463 Gtf2h4; general transcription factor IIH subunit 4 isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        107136788 Ercc3; general transcription and DNA repair factor IIH helicase subunit XPB isoform X1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        107151350 Ercc2; general transcription and DNA repair factor IIH helicase subunit XPD isoform X1	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        107153136 Gtf2h5; general transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        107139285 Cdk7; cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        107145849 Mnat1; CDK-activating kinase assembly factor MAT1 isoform X1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        107152338 Ccnh; cyclin-H isoform X1	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        107148740 Med6; mediator of RNA polymerase II transcription subunit 6 isoform X1	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        107141867 Med8; mediator of RNA polymerase II transcription subunit 8 isoform X3	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        107159415 Med11; mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        107145932 Med17; mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        107142054 Med18; mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        107135846 Med19; mediator of RNA polymerase II transcription subunit 19	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        107143906 Med20; mediator of RNA polymerase II transcription subunit 20 isoform X3	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        107139147 Med28; mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        107152770 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        107151476 Med29; mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        107142874 Med30; mediator of RNA polymerase II transcription subunit 30	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        107160006 Med1; mediator of RNA polymerase II transcription subunit 1 isoform X1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        107141041 Med4; mediator of RNA polymerase II transcription subunit 4 isoform X1	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        107148078 Med7; mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        107157156 Med9; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 9	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        107146311 Med10; mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        107152738 Med21; mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        107135145 mediator of RNA polymerase II transcription subunit 31-like	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
E        107159374 Med31; mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        107144306 Med14; mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        107154700 Med15; mediator of RNA polymerase II transcription subunit 15 isoform X1	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        107157399 Med16; mediator of RNA polymerase II transcription subunit 16	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        107153191 Cdk8; cyclin-dependent kinase 8 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        107154520 Cdk19; cyclin-dependent kinase 19 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        107154005 Ccnc; cyclin-C isoform X7	K15161 CCNC; cyclin-C 
E        107143275 Med12l; mediator of RNA polymerase II transcription subunit 12-like protein isoform X13	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        107155677 Med12; mediator of RNA polymerase II transcription subunit 12 isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        107150380 Med13; mediator of RNA polymerase II transcription subunit 13 isoform X2	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        107156459 mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        107155398 Med23; mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        107150710 Med24; mediator of RNA polymerase II transcription subunit 24	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        107151559 Med25; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 25	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        107145323 mediator of RNA polymerase II transcription subunit 26 isoform X3	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        107151983 Med27; mediator of RNA polymerase II transcription subunit 27 isoform X1	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        107149584 Kat2b; histone acetyltransferase KAT2B	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        107150694 Kat2a; histone acetyltransferase KAT2A	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        107155951 transformation/transcription domain-associated protein isoform X9	K08874 TRRAP; transformation/transcription domain-associated protein 
E        107143652 Supt3h; transcription initiation protein SPT3 homolog isoform X2	K11313 SUPT3H; transcription initiation protein SPT3 
E        107150359 Tada2a; transcriptional adapter 2-alpha isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        107139110 Tada2b; transcriptional adapter 2-beta isoform X2	K15127 TADA2B; transcriptional adapter 2-beta 
E        107150063 Tada3; transcriptional adapter 3	K11315 TADA3; transcriptional adapter 3 
E        107147245 Tada1; transcriptional adapter 1	K11317 TADA1; transcriptional adapter 1 
E        107142884 Taf2; transcription initiation factor TFIID subunit 2 isoform X2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        107139568 Taf4b; transcription initiation factor TFIID subunit 4B isoform X1	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        107154107 Taf4; transcription initiation factor TFIID subunit 4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        107149856 Taf5; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        107157893 Taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        107135932 Taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        107147105 Taf6; transcription initiation factor TFIID subunit 6 isoform X2	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        107141973 Taf7; transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        107156222 Taf7l; transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        107139429 Taf9; transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        107147422 transcription initiation factor TFIID subunit 9-like	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        107160941 Taf9b; transcription initiation factor TFIID subunit 9B isoform X1	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        107135607 Taf10; transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        107142048 Taf12; transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        107150521 Atxn7l3; ataxin-7-like protein 3 isoform X3	K11363 SGF11; SAGA-associated factor 11 
E        107146903 Sgf29; SAGA-associated factor 29 isoform X1	K11364 SGF29; SAGA-associated factor 29 
E        107137400 Supt7l; STAGA complex 65 subunit gamma	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        107144551 Atxn7l1; ataxin-7-like protein 1 isoform X13	K11318 ATXN7; ataxin-7 
E        107149671 Atxn7; ataxin-7 isoform X2	K11318 ATXN7; ataxin-7 
E        107158631 Atxn7l2; ataxin-7-like protein 2	K11318 ATXN7; ataxin-7 
E        107140709 Chd1; chromodomain-helicase-DNA-binding protein 1 isoform X4	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        107142864 Eny2; transcription and mRNA export factor ENY2 isoform X1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        107157168 Usp22; ubiquitin carboxyl-terminal hydrolase 22	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        107159857 Usp27x; ubiquitin carboxyl-terminal hydrolase 27	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        107159985 Usp51; ubiquitin carboxyl-terminal hydrolase 51	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        107150917 Sf3b3; splicing factor 3B subunit 3 isoform X1	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        107145196 Smarca4; transcription activator BRG1 isoform X2	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        107148250 Smarca2; probable global transcription activator SNF2L2 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        107154668 Smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        107140180 Smarcc2; SWI/SNF complex subunit SMARCC2 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        107145080 Smarcc1; SWI/SNF complex subunit SMARCC1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        107148618 Smarcd1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        107148925 Smarcd3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        107158335 Smarcd2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X3	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        107150618 Smarce1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X2	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        107135766 actin, cytoplasmic 2-like	K05692 ACTB_G1; actin beta/gamma 1 
E        107149958 actin, cytoplasmic 1-like	K05692 ACTB_G1; actin beta/gamma 1 
E        107155983 Actb; actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        107157705 Actg1; actin, cytoplasmic 2	K05692 ACTB_G1; actin beta/gamma 1 
E        107158205 actin	K05692 ACTB_G1; actin beta/gamma 1 
E        107149460 Actl6a; actin-like protein 6A	K11340 ACTL6A; actin-like protein 6A 
E        107146609 Actl6b; actin-like protein 6B	K11652 ACTL6B; actin-like protein 6B 
E        107142086 Arid1a; LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        107153142 Arid1b; AT-rich interactive domain-containing protein 1B isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        107160128 LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A-like	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        107148707 Arid2; AT-rich interactive domain-containing protein 2	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        107149702 Pbrm1; protein polybromo-1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        107154668 Smarcb1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        107151136 Sub1; activated RNA polymerase II transcriptional coactivator p15	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        107154836 Ccar1; cell division cycle and apoptosis regulator protein 1 isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        107148818 Calcoco1; calcium-binding and coiled-coil domain-containing protein 1 isoform X1	K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        107135834 Tcea2; transcription elongation factor A protein 2 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        107136389 transcription elongation factor A protein 1-like	K03145 TFIIS; transcription elongation factor S-II 
E        107141556 Tcea3; transcription elongation factor A protein 3	K03145 TFIIS; transcription elongation factor S-II 
E        107142390 Tcea1; transcription elongation factor A protein 1	K03145 TFIIS; transcription elongation factor S-II 
E        107136562 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        107150405 Supt4h1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        107155781 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        107151469 Supt5h; transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        107155256 Supt6h; transcription elongation factor SPT6 isoform X1	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        107156195 Ttf2; transcription termination factor 2 isoform X2	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        107135462 Pcf11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X2	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        107143027 cleavage and polyadenylation specificity factor subunit 1 isoform X2	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        107137511 Cpsf3; cleavage and polyadenylation specificity factor subunit 3 isoform X3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        107155942 Cpsf4; cleavage and polyadenylation specificity factor subunit 4 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        107157182 Cpsf4l; putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        107137392 Ppp1cb; serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107149865 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107156435 Ppp1cc; serine/threonine-protein phosphatase PP1-gamma catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107157002 Ppp1ca; serine/threonine-protein phosphatase PP1-alpha catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        107151337 Sympk; symplekin isoform X1	K06100 SYMPK; symplekin 
E        107144377 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        107149975 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        107155586 Ssu72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X1	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        107140409 Xrn2; 5'-3' exoribonuclease 2 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        107143745 Dxo; decapping and exoribonuclease protein	K14845 RAI1; RAT1-interacting protein 
E        107138194 Rprd1b; regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        107139540 Rprd1a; regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        107151180 LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 1A-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        107141516 splicing factor, proline- and glutamine-rich isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        107142600 LOW QUALITY PROTEIN: splicing factor, proline- and glutamine-rich-like	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        107156401 Scaf8; SR-related and CTD-associated factor 8 isoform X3	K13191 RBM16; RNA-binding protein 16 
E        107136432 Scaf4; SR-related and CTD-associated factor 4 isoform X1	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        107151981 Setx; probable helicase senataxin isoform X1	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        107145162 Pin1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 isoform X1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        107151475 Paf1; RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        107147201 Cdc73; parafibromin	K15175 CDC73; parafibromin 
E        107135648 Ctr9; RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        107138093 Leo1; RNA polymerase-associated protein LEO1 isoform X1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        107138201 Rtf1; LOW QUALITY PROTEIN: RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        107139083 Nelfa; negative elongation factor A	K15179 WHSC2; negative elongation factor A 
E        107159205 Nelfb; negative elongation factor B isoform X1	K15180 COBRA1; negative elongation factor B 
E        107138048 Nelfcd; negative elongation factor C/D	K15181 TH1L; negative elongation factor C/D 
E        107143747 Nelfe; negative elongation factor E	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        107138157 Ell3; RNA polymerase II elongation factor ELL3	K15183 ELL; RNA polymerase II elongation factor ELL 
E        107145067 Ell; RNA polymerase II elongation factor ELL isoform X3	K15183 ELL; RNA polymerase II elongation factor ELL 
E        107148453 Ell2; RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        107152566 RNA polymerase II elongation factor ELL2-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        107153609 Aff1; AF4/FMR2 family member 1 isoform X4	K15184 AFF1; AF4/FMR2 family member 1 
E        107143253 Eaf2; ELL-associated factor 2	K15186 EAF; ELL-associated factor 
E        107149650 Eaf1; ELL-associated factor 1	K15186 EAF; ELL-associated factor 
E        107157464 Mllt1; protein ENL	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        107136811 Ccnt2; cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
E        107148588 Ccnt1; cyclin-T1	K15188 CCNT; cyclin T 
E        107152062 Cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        107138157 Ell3; RNA polymerase II elongation factor ELL3	K15183 ELL; RNA polymerase II elongation factor ELL 
E        107145067 Ell; RNA polymerase II elongation factor ELL isoform X3	K15183 ELL; RNA polymerase II elongation factor ELL 
E        107148453 Ell2; RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        107152566 RNA polymerase II elongation factor ELL2-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        107138054 Ice2; little elongation complex subunit 2 isoform X1	K26144 ICE2; little elongation complex subunit 2 
E        107154032 Zc3h8; zinc finger CCCH domain-containing protein 8	K24388 ZC3H8; zinc finger CCCH domain-containing protein 8 
D      Brd4/P-TEFb complex
E        107145291 Brd4; LOW QUALITY PROTEIN: bromodomain-containing protein 4	K11722 BRD4; bromodomain-containing protein 4 
E        107136811 Ccnt2; cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
E        107148588 Ccnt1; cyclin-T1	K15188 CCNT; cyclin T 
E        107152062 Cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        107150499 Hexim1; protein HEXIM1	K15189 HEXIM1_2; protein HEXIM1/2 
E        107150500 Hexim2; protein HEXIM2	K15189 HEXIM1_2; protein HEXIM1/2 
E        107147097 Mepce; LOW QUALITY PROTEIN: 7SK snRNA methylphosphate capping enzyme	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        107141402 Larp7; la-related protein 7 isoform X1	K15191 LARP7; La-related protein 7 
E        107136811 Ccnt2; cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
E        107148588 Ccnt1; cyclin-T1	K15188 CCNT; cyclin T 
E        107152062 Cdk9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
E        107153925 Ccar2; cell cycle and apoptosis regulator protein 2	K25816 CCAR2; cell cycle and apoptosis regulator protein 2 
E        107155111 Znf326; DBIRD complex subunit ZNF326 isoform X1	K13204 ZNF326; zinc finger protein 326 
D      Others
E        107147027 Gtf2i; general transcription factor II-I isoform X2	K03121 TFII-I; transcription initiation factor TFII-I 
E        107147028 Gtf2ird1; general transcription factor II-I repeat domain-containing protein 1 isoform X1	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        107154477 Btaf1; TATA-binding protein-associated factor 172 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        107155094 Dr1; protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        107156953 Drap1; dr1-associated corepressor isoform X1	K21752 DRAP1; Dr1-associated corepressor 
E        107135694 Spty2d1; protein SPT2 homolog isoform X2	K15193 SPTY2D1; protein SPT2 
E        107152524 Aff2; AF4/FMR2 family member 2 isoform X2	K15194 AFF2; AF4/FMR2 family member 2 
E        107154099 Aff3; AF4/FMR2 family member 3	K15195 AFF3; AF4/FMR2 family member 3 
E        107154000 Ctdp1; RNA polymerase II subunit A C-terminal domain phosphatase isoform X5	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        107138693 Ctdsp1; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        107139745 Ctdsp2; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        107145503 Ctdspl; CTD small phosphatase-like protein isoform X3	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        107136791 Iws1; protein IWS1 homolog isoform X1	K17498 SPN1; transcription factor SPN1 
E        107136893 Csrnp3; cysteine/serine-rich nuclear protein 3 isoform X2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        107145485 Csrnp1; cysteine/serine-rich nuclear protein 1	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        107148633 Csrnp2; cysteine/serine-rich nuclear protein 2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        107152638 LOW QUALITY PROTEIN: cysteine/serine-rich nuclear protein 1-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        107138199 Rpap1; RNA polymerase II-associated protein 1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        107155104 Rpap2; putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        107148570 Rpap3; RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        107150431 Ccnk; LOW QUALITY PROTEIN: cyclin-K	K23326 CCNK; cyclin K 
E        107137402 Gpn1; GPN-loop GTPase 1 isoform X1	K24104 GPN; GPN-loop GTPase 
E        107141538 Gpn2; GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        107156429 Gpn3; GPN-loop GTPase 3 isoform X1	K24104 GPN; GPN-loop GTPase 
E        107150959 Slc7a6os; probable RNA polymerase II nuclear localization protein SLC7A6OS	K28237 SLC7A6OS; RNA polymerase II nuclear localization protein 
E        107152500 Tceal1; transcription elongation factor A protein-like 1	K26769 TCEAL1; transcription elongation factor A protein-like 1 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        107158135 Polr3a; DNA-directed RNA polymerase III subunit RPC1 isoform X2	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        107139932 Polr3b; DNA-directed RNA polymerase III subunit RPC2 isoform X1	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        107143945 Polr1c; DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        107140958 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        107160406 Polr3c; DNA-directed RNA polymerase III subunit RPC3 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        107153934 Polr3d; DNA-directed RNA polymerase III subunit RPC4 isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        107146857 Polr3e; DNA-directed RNA polymerase III subunit RPC5 isoform X2	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        107140219 Polr3f; DNA-directed RNA polymerase III subunit RPC6 isoform X1	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        107147676 Polr3g; DNA-directed RNA polymerase III subunit RPC7 isoform X1	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        107160386 Polr3gl; DNA-directed RNA polymerase III subunit RPC7-like isoform X1	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        107155845 Polr3h; DNA-directed RNA polymerase III subunit RPC8 isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        107147011 DNA-directed RNA polymerase III subunit RPC9 isoform X2	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        125612320 Polr3k; DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        107157238 Polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107139869 Polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107145597 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107154327 Polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107142368 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107142833 Polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107144950 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107154336 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107142300 Polr2l; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        107140766 Gtf3a; transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        107138299 Tbpl2; TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107153083 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107155540 Tbpl1; TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107151155 Brf1; transcription factor IIIB 90 kDa subunit isoform X2	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        107155384 Brf2; transcription factor IIIB 50 kDa subunit	K15197 BRF2; transcription factor IIIB 50 kDa subunit 
E        107152358 Bdp1; transcription factor TFIIIB component B'' homolog	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        107146882 Gtf3c1; general transcription factor 3C polypeptide 1 isoform X2	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        107137417 Gtf3c2; general transcription factor 3C polypeptide 2	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        107138565 Gtf3c3; general transcription factor 3C polypeptide 3 isoform X2	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        107151978 Gtf3c4; general transcription factor 3C polypeptide 4 isoform X2	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        107151972 Gtf3c5; general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        107147553 general transcription factor 3C polypeptide 6-like	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
E        107154531 Gtf3c6; general transcription factor 3C polypeptide 6 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        107151972 Gtf3c5; general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        107138565 Gtf3c3; general transcription factor 3C polypeptide 3 isoform X2	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        107145908 Snapc1; snRNA-activating protein complex subunit 1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        107157357 Snapc2; snRNA-activating protein complex subunit 2 isoform X1	K15209 SNAPC2; snRNA-activating protein complex subunit 2 
E        107156508 Snapc3; snRNA-activating protein complex subunit 3 isoform X1	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        107159198 Snapc4; snRNA-activating protein complex subunit 4 isoform X5	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
E        107137999 Snapc5; snRNA-activating protein complex subunit 5 isoform X1	K15211 SNAPC5; snRNA-activating protein complex subunit 5 
D      Octamer transcription factors
E        107145662 Pou2f3; POU domain, class 2, transcription factor 3 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        107147427 Pou2f1; POU domain, class 2, transcription factor 1 isoform X2	K09364 POU2F; POU domain transcription factor, class 2 
E        107151408 Pou2f2; POU domain, class 2, transcription factor 2 isoform X12	K09364 POU2F; POU domain transcription factor, class 2 
E        107160473 Pou5f1; POU domain, class 5, transcription factor 1	K09367 POU5F; POU domain transcription factor, class 5 
D      Others
E        107143826 Znf76; zinc finger protein 76 isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        107157991 Znf143; zinc finger protein 143	K20828 ZNF143_76; zinc finger protein 143/76 
E        107143018 Maf1; repressor of RNA polymerase III transcription MAF1 homolog	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        107159739 Polr1a; DNA-directed RNA polymerase I subunit RPA1 isoform X1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        107154159 Polr1b; DNA-directed RNA polymerase I subunit RPA2 isoform X1	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        107143945 Polr1c; DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        107140958 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        107147787 Polr1e; DNA-directed RNA polymerase I subunit RPA49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        107152629 Polr1f; DNA-directed RNA polymerase I subunit RPA43	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        107151349 Polr1g; DNA-directed RNA polymerase I subunit RPA34	K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34 
E        107160864 Polr1h; DNA-directed RNA polymerase I subunit RPA12	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        107157238 Polr2e; DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        107139869 Polr2f; DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        107145597 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107154327 Polr2h; DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        107142368 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107142833 Polr2k; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107144950 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107154336 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        107142300 Polr2l; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        107138299 Tbpl2; TATA box-binding protein-like 2 isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107153083 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107155540 Tbpl1; TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        107140524 Taf1a; TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1	K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A 
E        107137062 Taf1b; TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
E        107151038 Taf1c; TATA box-binding protein-associated factor RNA polymerase I subunit C	K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C 
E        107145934 Taf1d; TATA box-binding protein-associated factor RNA polymerase I subunit D	K15215 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D 
C    Other transcription-related factors
D      UBF
E        107150520 Ubtf; nucleolar transcription factor 1 isoform X1	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        107146816 Rrn3; RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        107136562 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        107150405 Supt4h1; transcription elongation factor SPT4	K15171 SUPT4H1; transcription elongation factor SPT4 
E        107155781 transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        107151469 Supt5h; transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        107141098 Smarca5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        107140158 Baz2a; bromodomain adjacent to zinc finger domain protein 2A isoform X1	K15224 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A 
D      CTDK-I complex
D      Transcription termination factors
E        107151980 Ttf1; transcription termination factor 1 isoform X1	K15225 TTF1; transcription termination factor 1 
E        107150569 Cavin1; caveolae-associated protein 1 isoform X1	K19387 CAVIN1; caveolae-associated protein 1 
D      Others
E        107149950 Nolc1; nucleolar and coiled-body phosphoprotein 1	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        107158261 Gtf2b; transcription initiation factor IIB isoform X2	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        107143259 Gtf2e1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 17, 2025