+D GENES KO
#
KEGG Orthology (KO) - Mycoplasma mycoides subsp. mycoides SC PG1
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:mmy00010]
D MSC_0863 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0875 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0505 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D MSC_0260 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D MSC_0139 fbaA2; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MSC_0823 tpi; TRIOSEPHOSPHATE ISOMERASE K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D MSC_0679 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D MSC_0678 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D MSC_0825 gpm; phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D MSC_0253 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MSC_0261 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D MSC_0265 pdhA; pyruvate dehydrogenase (lipoamide), alpha chain K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D MSC_0266 pdhB; Pyruvate dehydrogenase (lipoamide), beta chain K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D MSC_0267 pdhC; dihydrolipoamide S-acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0532 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D MSC_0829 manB; phosphoglucomutase or phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D MSC_0509 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D MSC_0840 bgl; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D MSC_0274 crr; PTS SYSTEM, GLUCOSE-SPECIFIC IIA COMPONENT K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D MSC_0054 ptsG; PTS system, glucose-specific IIABC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0873 ptsG; PTS system, glucose-specific, IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0860 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:mmy00020]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0265 pdhA; pyruvate dehydrogenase (lipoamide), alpha chain K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D MSC_0266 pdhB; Pyruvate dehydrogenase (lipoamide), beta chain K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D MSC_0267 pdhC; dihydrolipoamide S-acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:mmy00030]
D MSC_0505 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D MSC_0305 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D MSC_0396 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D MSC_0372 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D MSC_0895 rpiB; ribose 5-phosphate isomerase, RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D MSC_0828 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D MSC_0829 manB; phosphoglucomutase or phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D MSC_0952 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D MSC_0509 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D MSC_0139 fbaA2; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MSC_0260 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:mmy00040]
D MSC_0990 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0110 galU; UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0305 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D MSC_0396 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:mmy00051]
D MSC_0495 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D MSC_0260 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D MSC_0017 mtlD; MANNITOL-1-PHOSPHATE 5-DEHYDROGENASE K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D MSC_0020 srlD; SORBITOL-6-PHOSPHATE 2-DEHYDROGENASE K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D MSC_0647 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D MSC_0832 fruB; 1-PHOSPHOFRUCTOKINASE K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D MSC_0139 fbaA2; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MSC_0823 tpi; TRIOSEPHOSPHATE ISOMERASE K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D MSC_0895 rpiB; ribose 5-phosphate isomerase, RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D MSC_0842 frvA; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D MSC_0831 frvB; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D MSC_0019 EIIA-mtl; PTS SYSTEM, MANNITOL-PERMEASE IIA COMPONENT K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D MSC_0021 EIIBC-mtl; PTS SYSTEM, MANNITOL-PERMEASE IIBC COMPONENT K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:mmy00052]
D MSC_0971 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0978 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0985 galE; UDPglucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0990 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0110 galU; UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0829 manB; phosphoglucomutase or phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D MSC_0863 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0875 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0970 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0977 glf; UDP-galactopuranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0984 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0260 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D MSC_0644 fbaA1; Fructose-bisphosphate aldolase class-II K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
C 00053 Ascorbate and aldarate metabolism
D MSC_0394 pts; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D MSC_0395 conserved hypothetical transmembrane protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
C 00500 Starch and sucrose metabolism [PATH:mmy00500]
D MSC_0646 pts; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D MSC_0990 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0110 galU; UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0840 bgl; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D MSC_0274 crr; PTS SYSTEM, GLUCOSE-SPECIFIC IIA COMPONENT K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D MSC_0749 pts; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D MSC_0748 aglA; Alpha-glucosidase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D MSC_0829 manB; phosphoglucomutase or phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D MSC_0863 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0875 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0505 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mmy00520]
D MSC_0274 crr; PTS SYSTEM, GLUCOSE-SPECIFIC IIA COMPONENT K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D MSC_0130 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D MSC_0533 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D MSC_0129 nagB; GLUCOSAMINE-6-PHOSPHATE DEAMINASE K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D MSC_0821 nagB; GLUCOSAMINE-6-PHOSPHATE DEAMINASE K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D MSC_0250 pts; PTS system, sucrose-specific IIC component (trunca K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D MSC_0248 Putative glucokinase regulator K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D MSC_0555 N-ACYLGLUCOSAMINE-6-P 2-EPIMERASE K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D MSC_0559 nal; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D MSC_0054 ptsG; PTS system, glucose-specific IIABC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0873 ptsG; PTS system, glucose-specific, IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0860 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0863 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0875 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0829 manB; phosphoglucomutase or phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D MSC_0990 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0110 galU; UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0971 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0978 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0985 galE; UDPglucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0970 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0977 glf; UDP-galactopuranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0984 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0505 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D MSC_0495 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:mmy00620]
D MSC_0265 pdhA; pyruvate dehydrogenase (lipoamide), alpha chain K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D MSC_0266 pdhB; Pyruvate dehydrogenase (lipoamide), beta chain K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D MSC_0267 pdhC; dihydrolipoamide S-acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0270 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D MSC_0269 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D MSC_0261 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D MSC_0532 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mmy00630]
D MSC_0894 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00640 Propanoate metabolism [PATH:mmy00640]
D MSC_0270 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D MSC_0269 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0532 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D MSC_0823 tpi; TRIOSEPHOSPHATE ISOMERASE K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:mmy00190]
D MSC_0619 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D MSC_0887 atpA; ATP SYNTHASE ALPHA CHAIN K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D MSC_0618 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D MSC_0885 atpD; ATP SYNTHASE BETA CHAIN K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D MSC_0886 atpG; ATP SYNTHASE GAMMA CHAIN K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D MSC_0888 atpH; ATP SYNTHASE DELTA CHAIN K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D MSC_0884 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D MSC_0891 atpB; ATP SYNTHASE A CHAIN K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D MSC_0889 atpF; ATP SYNTHASE B CHAIN K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D MSC_0890 atpE; ATP SYNTHASE C CHAIN K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D MSC_0404 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:mmy00710]
D MSC_0678 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D MSC_0679 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D MSC_0139 fbaA2; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MSC_0372 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D MSC_0895 rpiB; ribose 5-phosphate isomerase, RpiB K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D MSC_0823 tpi; TRIOSEPHOSPHATE ISOMERASE K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D MSC_0305 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D MSC_0396 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:mmy00720]
D MSC_0758 folD; methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D MSC_0269 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D MSC_0270 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:mmy00680]
D MSC_0894 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D MSC_0253 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MSC_0139 fbaA2; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D MSC_0260 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D MSC_0270 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D MSC_0269 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D MSC_0825 gpm; phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism
D MSC_0700 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D MSC_0864 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D MSC_0877 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00920 Sulfur metabolism
D MSC_0148 dhh_(mgpA); DHH family protein (MgpA-like protein) K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D MSC_0692 hypothetical protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D MSC_0578 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D MSC_0692 hypothetical protein K02078 acpP; acyl carrier protein
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:mmy00561]
D MSC_0747 dhaK1; glycerone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D MSC_0276 dhaK2; glycerone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D MSC_0277 CONSERVED HYPOTHETICAL PROTEIN K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D MSC_0258 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D MSC_0480 plsX; fatty acid/phospholipid synthesis PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D MSC_0112 Conserved hypothetical transmembrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D MSC_0577 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:mmy00564]
D MSC_0409 gpsA; GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D MSC_0112 Conserved hypothetical transmembrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D MSC_0577 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D MSC_0145 glpQ; glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D MSC_0356 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D MSC_0911 pgsA; CDPdiacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D MSC_0156 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:mmy00230]
D MSC_0829 manB; phosphoglucomutase or phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D MSC_0952 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D MSC_0849 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D MSC_0474 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D MSC_0835 pnp; Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D MSC_0256 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D MSC_0848 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D MSC_0616 Ham1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D MSC_0050 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D MSC_0218 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D MSC_0853 nrdE; ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D MSC_0855 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D MSC_0475 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D MSC_0850 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D MSC_0325 hypothetical protein K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D MSC_0444 Deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D MSC_0491 Conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D MSC_0725 adk; ADENYLATE KINASE K00939 adk; adenylate kinase [EC:2.7.4.3]
D MSC_0700 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D MSC_0864 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D MSC_0877 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:mmy00240]
D MSC_0601 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D MSC_0134 ctrA; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D MSC_0407 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D MSC_0552 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D MSC_0893 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D MSC_0491 Conserved hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D MSC_0830 deoA; thymidine phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D MSC_0853 nrdE; ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D MSC_0855 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D MSC_0325 hypothetical protein K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D MSC_0444 Deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D MSC_0581 dctD; dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D MSC_0046 tmk; THYMIDYLATE KINASE K00943 tmk; dTMP kinase [EC:2.7.4.9]
D MSC_0149 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:mmy00250]
D MSC_1015 asnA; ASPARTATE-AMMONIA LIGASE K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D MSC_1040 asnA; Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D MSC_0064 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D MSC_0850 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D MSC_0849 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
C 00260 Glycine, serine and threonine metabolism [PATH:mmy00260]
D MSC_0894 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D MSC_0825 gpm; phosphoglycerate mutase (2,3-diphosphoglycerate-independent) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0114 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:mmy00270]
D MSC_0806 patB; aminotransferase (PLP-dependent) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D MSC_0794 patB; aminotransferase (PLP-dependent) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D MSC_0492 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D MSC_0443 pfs; 5-methylthioadenosine nucleosidase/S-adenosylhomocystein nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D MSC_0216 dcm; Cytosine-specific DNA-methyltransferase Sau96I K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D MSC_0532 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00280 Valine, leucine and isoleucine degradation [PATH:mmy00280]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00290 Valine, leucine and isoleucine biosynthesis
D MSC_0114 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00300 Lysine biosynthesis
D MSC_0554 Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C 00310 Lysine degradation
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis
D MSC_0700 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D MSC_0864 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D MSC_0877 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00330 Arginine and proline metabolism
D MSC_0701 Conserved hypothetical protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:mmy00430]
D MSC_0064 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D MSC_0269 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D MSC_0270 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:mmy00450]
D MSC_0806 patB; aminotransferase (PLP-dependent) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D MSC_0794 patB; aminotransferase (PLP-dependent) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D MSC_0501 nifS; nitrogen fixation protein class-V pyridoxal-phosph K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D MSC_0938 trxB; thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D MSC_0012 metS; Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:mmy00460]
D MSC_1015 asnA; ASPARTATE-AMMONIA LIGASE K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D MSC_1040 asnA; Aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D MSC_0894 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism
C 00480 Glutathione metabolism [PATH:mmy00480]
D MSC_0235 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D MSC_0163 pepA; LEUCYL AMINOPEPTIDASE K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:mmy00511]
D MSC_0845 Glycosyl hydrolases family protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
D MSC_0294 Hypothetical protein K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:mmy00541]
D MSC_0990 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0110 galU; UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D MSC_0971 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0978 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0985 galE; UDPglucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D MSC_0970 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0977 glf; UDP-galactopuranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0984 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D MSC_0495 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:mmy00730]
D MSC_0280 thiI; Thiamin biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D MSC_0306 Conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D MSC_0304 CONSERVED HYPOTHETICAL PROTEIN K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D MSC_0725 adk; ADENYLATE KINASE K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:mmy00740]
D MSC_0824 Putative hydrolase of the HAD family K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D MSC_0241 conserved hypothetical protein K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D MSC_0106 ribC_ribF; Riboflavin kinase / FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D MSC_0337 ribF; Riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:mmy00760]
D MSC_0687 pncB; Probable nicotinic phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D MSC_0835 pnp; Purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D MSC_0442 Probable nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D MSC_0440 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D MSC_0420 cinA; competence-damage inducible protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D MSC_1020 pncA; pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D MSC_1045 pncA; Pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D MSC_0302 HYPOTHETICAL PROTEIN K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:mmy00770]
D MSC_0272 kdtB; PANTETHEINE-PHOSPHATE ADENYLYLTRANSFERASE K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D MSC_0096 coaE; DEPHOSPHO-COA KINASE K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D MSC_0578 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism [PATH:mmy00785]
D MSC_0527 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D MSC_0264 lplA; lipoate protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0265 pdhA; pyruvate dehydrogenase (lipoamide), alpha chain K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D MSC_0266 pdhB; Pyruvate dehydrogenase (lipoamide), beta chain K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D MSC_0267 pdhC; dihydrolipoamide S-acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:mmy00790]
D MSC_0468 Conserved hypothetical protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D MSC_0942 folC; dihydrofolate:folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
C 00670 One carbon pool by folate [PATH:mmy00670]
D MSC_0758 folD; methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D MSC_0894 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D MSC_0450 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D MSC_0503 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D MSC_0372 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:mmy00521]
D MSC_0863 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0875 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0829 manB; phosphoglucomutase or phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D MSC_0863 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
D MSC_0875 glk; GLUCOKINASE K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D MSC_0692 hypothetical protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D MSC_0492 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:mmy03020]
D MSC_1008 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D MSC_1009 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D MSC_0721 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D MSC_0133 Hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:mmy03010]
D MSC_0608 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D MSC_0739 rpsC; 30S RIBOSOMAL PROTEIN S3 K02982 RP-S3; small subunit ribosomal protein S3
D MSC_0278 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D MSC_0728 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D MSC_0027 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D MSC_0158 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D MSC_0731 rpsH; Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D MSC_0712 rpsI; 30S RIBOSOMAL PROTEIN S9 K02996 RP-S9; small subunit ribosomal protein S9
D MSC_0746 rpsJ; 30S RIBOSOMAL PROTEIN S10 K02946 RP-S10; small subunit ribosomal protein S10
D MSC_0722 rpsK; 30S RIBOSOMAL PROTEIN S11 K02948 RP-S11; small subunit ribosomal protein S11
D MSC_0157 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D MSC_0723 rpsM; 30S RIBOSOMAL PROTEIN S13 K02952 RP-S13; small subunit ribosomal protein S13
D MSC_0347 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D MSC_0425 rpsP; 30S RIBOSOMAL PROTEIN S16 K02959 RP-S16; small subunit ribosomal protein S16
D MSC_0736 rpsQ; 30S RIBOSOMAL PROTEIN S17 K02961 RP-S17; small subunit ribosomal protein S17
D MSC_0025 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D MSC_0741 rpsS; 30S RIBOSOMAL PROTEIN S19 K02965 RP-S19; small subunit ribosomal protein S19
D MSC_0086 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D MSC_0541 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D MSC_0995 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D MSC_0742 rplB; 50S RIBOSOMAL PROTEIN L2 K02886 RP-L2; large subunit ribosomal protein L2
D MSC_0745 rplC; 50S RIBOSOMAL PROTEIN L3 K02906 RP-L3; large subunit ribosomal protein L3
D MSC_0744 rplD; 50S RIBOSOMAL PROTEIN L4 K02926 RP-L4; large subunit ribosomal protein L4
D MSC_0732 rplE; 50S RIBOSOMAL PROTEIN L5 K02931 RP-L5; large subunit ribosomal protein L5
D MSC_0730 rplF; 50S RIBOSOMAL PROTEIN L6 K02933 RP-L6; large subunit ribosomal protein L6
D MSC_1007 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D MSC_0955 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D MSC_1006 rplJ; 50S RIBOSOMAL PROTEIN L10 K02864 RP-L10; large subunit ribosomal protein L10
D MSC_0994 rplK; 50S Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D MSC_0713 rplM; 50S RIBOSOMAL PROTEIN L13 K02871 RP-L13; large subunit ribosomal protein L13
D MSC_0735 rplN; 50S RIBOSOMAL PROTEIN L14 K02874 RP-L14; large subunit ribosomal protein L14
D MSC_0727 rplO; 50S RIBOSOMAL PROTEIN L15 K02876 RP-L15; large subunit ribosomal protein L15
D MSC_0738 rplP; 50S RIBOSOMAL PROTEIN L16 K02878 RP-L16; large subunit ribosomal protein L16
D MSC_0720 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D MSC_0729 rplR; 50S RIBOSOMAL PROTEIN L18 K02881 RP-L18; large subunit ribosomal protein L18
D MSC_0428 rplS; 50S RIBOSOMAL PROTEIN L19 K02884 RP-L19; large subunit ribosomal protein L19
D MSC_0223 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D MSC_0562 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D MSC_0740 rplV; 50S RIBOSOMAL PROTEIN L22 K02890 RP-L22; large subunit ribosomal protein L22
D MSC_0743 rplW; 50S RIBOSOMAL PROTEIN L23 K02892 RP-L23; large subunit ribosomal protein L23
D MSC_0734 rplX; 50S RIBOSOMAL PROTEIN L24 K02895 RP-L24; large subunit ribosomal protein L24
D MSC_0560 rpmA; 50S RIBOSOMAL PROTEI L27 K02899 RP-L27; large subunit ribosomal protein L27
D MSC_0483 rpmB; 50S RIBOSOMAL PROTEIN L28 K02902 RP-L28; large subunit ribosomal protein L28
D MSC_0737 rpmC; 50S RIBOSOMAL PROTEIN L29 K02904 RP-L29; large subunit ribosomal protein L29
D MSC_0146 rpme; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D MSC_0593 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D MSC_1068 rpmH; 50S RIBOSOMAL PROTEIN L34 K02914 RP-L34; large subunit ribosomal protein L34
D MSC_0222 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D MSC_rrnA-16S rrnA-16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MSC_rrnB-16S rrnB-16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MSC_rrnA-23S rrnA-23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D MSC_rrnB-23S rrnB-23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D MSC_rrnA-5S rrnA-5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D MSC_rrnB-5S rrnB-5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:mmy00970]
D MSC_tRNA_f_6 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D MSC_tRNA_f_2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MSC_tRNA_f_4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MSC_tRNA_r_14 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D MSC_tRNA_f_11 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D MSC_tRNA_f_13 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D MSC_tRNA_r_24 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D MSC_tRNA_r_15 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D MSC_tRNA_f_1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D MSC_tRNA_r_19 tRNA-His K14226 tRNA-His; tRNA His
D MSC_tRNA_r_18 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D MSC_tRNA_r_29 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MSC_tRNA_f_3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MSC_tRNA_r_26 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MSC_tRNA_r_25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D MSC_tRNA_r_28 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D MSC_tRNA_r_27 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D MSC_tRNA_f_7 tRNA-Met K14230 tRNA-Met; tRNA Met
D MSC_tRNA_f_8 tRNA-Met K14230 tRNA-Met; tRNA Met
D MSC_tRNA_f_10 tRNA-Met K14230 tRNA-Met; tRNA Met
D MSC_tRNA_f_12 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D MSC_tRNA_f_5 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D MSC_tRNA_f_9 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MSC_tRNA_f_0 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MSC_tRNA_r_17 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D MSC_tRNA_r_22 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D MSC_tRNA_r_21 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D MSC_tRNA_r_23 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D MSC_tRNA_r_16 tRNA-Val K14237 tRNA-Val; tRNA Val
D MSC_tRNA_r_20 tRNA-Trp K14238 tRNA-Sec; tRNA Sec
D MSC_0131 gltX; glutamate-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D MSC_0762 gatA; glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D MSC_0761 gatB; glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D MSC_0763 gatC; Glutamyl-tRNA (Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D MSC_0178 alaS; alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MSC_0333 aspS; aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MSC_0080 asnS; asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D MSC_0464 glyS; glycine-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D MSC_0262 thrS; threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D MSC_0066 serS; Serine-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D MSC_0959 cysS; cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D MSC_0012 metS; Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D MSC_0450 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D MSC_0303 valS; valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MSC_0709 leuS; leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MSC_0585 ileS; isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MSC_0069 lysS; Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D MSC_0599 argS; arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MSC_0327 proS; proline-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D MSC_0334 hisS; histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D MSC_0596 pheS; Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D MSC_0595 pheT; phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D MSC_0686 tyrS; tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MSC_0358 trpS; tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:mmy03060]
D MSC_0726 secY; preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D MSC_0473 Hypothetical transmembrane protein K12257 secDF; SecD/SecF fusion protein
D MSC_1066 Conserved hypothetical transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D MSC_0089 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D MSC_0423 ffh; Signal recognition particle M54 protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D MSC_0489 ftsY; Cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D MSC_0584 lsp; Signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:mmy04122]
D MSC_0447 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D MSC_0280 thiI; Thiamin biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:mmy03018]
D MSC_0253 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MSC_0856 rnr; Ribonulease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D MSC_0422 Conserved hypothetical transmembrane protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D MSC_0670 Conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D MSC_0300 CONSERVED HYPOTEHTICAL PROTEIN K12574 rnj; ribonuclease J [EC:3.1.-.-]
D MSC_0260 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D MSC_0610 dnaK; HEAT SHOCK PROTEIN 70 (CHAPERONE) K04043 dnaK; molecular chaperone DnaK
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:mmy03030]
D MSC_0684 dnaE; DNA polymerase III alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MSC_0355 polC; DNA polymerase III alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D MSC_0048 dnaX; DNA polymerase III gamma-tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MSC_0045 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D MSC_0945 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D MSC_0002 dnaN; DNA POLYMERASE III, BETA CHAIN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MSC_0956 dnaC; replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D MSC_0465 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D MSC_0026 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D MSC_0430 rnhB; ribonuclease H II K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D MSC_0683 polA; DNA POLYMERASE I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D MSC_0764 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:mmy03410]
D MSC_0496 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D MSC_0682 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D MSC_0105 nfo; endodeoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D MSC_0683 polA; DNA POLYMERASE I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D MSC_0764 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:mmy03420]
D MSC_0943 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D MSC_0944 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D MSC_0297 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D MSC_0769 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D MSC_0683 polA; DNA POLYMERASE I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D MSC_0764 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:mmy03430]
D MSC_0769 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D MSC_0101 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D MSC_0100 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D MSC_0026 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D MSC_0684 dnaE; DNA polymerase III alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MSC_0355 polC; DNA polymerase III alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D MSC_0002 dnaN; DNA POLYMERASE III, BETA CHAIN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MSC_0048 dnaX; DNA polymerase III gamma-tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MSC_0945 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D MSC_0045 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D MSC_0764 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D MSC_0200 mod; adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:mmy03440]
D MSC_0026 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D MSC_0463 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D MSC_0047 recR; DNA REPAIR PROTEIN RecR K06187 recR; recombination protein RecR
D MSC_0421 recA; recombination protein recA K03553 recA; recombination protein RecA
D MSC_0683 polA; DNA POLYMERASE I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D MSC_0542 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D MSC_0543 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D MSC_0378 conserved hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D MSC_0512 recD; Exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D MSC_0649 recD; EXODEOXYRIBONUCLEASE V ALPHA CHAIN K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D MSC_0684 dnaE; DNA polymerase III alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MSC_0355 polC; DNA polymerase III alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D MSC_0002 dnaN; DNA POLYMERASE III, BETA CHAIN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MSC_0048 dnaX; DNA polymerase III gamma-tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MSC_0945 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D MSC_0045 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:mmy02010]
D MSC_0226 potCD; Spermidine/putrescine ABC transporter, permease and substrate-binding component K11070 potC; spermidine/putrescine transport system permease protein
D MSC_0225 potB; spermidine/putrescine ABC transporter permease component K11071 potB; spermidine/putrescine transport system permease protein
D MSC_0224 potA; spermidine/putrescine ABC transporter ATP-binding component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D MSC_0516 gtsA; Glycerol ABC transporter, ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D MSC_0011 rbsB; Ribose/galactose ABC transporter, substrate-binding component K07335 bmpA; basic membrane protein A and related proteins
D MSC_0009 rbsC-1; Ribose/Galactose ABC transporter, permease component I K23535 nupB; general nucleoside transport system permease protein
D MSC_0008 rbsC-2; Ribose/Galactose ABC transporter, permease component II K23536 nupC; general nucleoside transport system permease protein
D MSC_0010 rbsA; Ribose/Galactose ABC transporter, ATP-binding component K23537 nupA; general nucleoside transport system ATP-binding protein
D MSC_0485 pstS; Phosphate ABC transporter, substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein
D MSC_0486 pstCA; phosphate ABC transport system, permease component K02037 pstC; phosphate transport system permease protein
D MSC_0487 pstB; Phosphate ABC transporter, ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D MSC_0790 phnD; Alkylphosphonate ABC transporter, substrate-bindin K02044 phnD; phosphonate transport system substrate-binding protein
D MSC_0079 phnD?; prolipoprotein, putative phosphonate ABC transport K02044 phnD; phosphonate transport system substrate-binding protein
D MSC_0804 abc; ABC TRANSPORTER, substrate-binding component K02044 phnD; phosphonate transport system substrate-binding protein
D MSC_0077 phnE; phosphonate ABC transporter, permease component K02042 phnE; phosphonate transport system permease protein
D MSC_0788 phnB; Alkylphosphonate ABC transporter, permease component K02042 phnE; phosphonate transport system permease protein
D MSC_0078 phnC; phosphonate ABC transporter, ATP-binding component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D MSC_0789 phnC; alkylphosphonate ABC transporter, ATP-binding component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D MSC_0803 phnC; alkylphosphonate ABC transporter, ATP-binding component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D MSC_0964 oppA; Oligopeptide ABC transporter, substrate-binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D MSC_0184 oppA; OLIGOPEPTIDE ABC transporter, substrate-binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D MSC_0180 oppB; Oligopeptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein
D MSC_0965 oppB; oligopeptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein
D MSC_0181 oppC; Oligopeptide ABC transporter, permease component I K15582 oppC; oligopeptide transport system permease protein
D MSC_0966 oppC; oligopeptide ABC transporter, permease component K15582 oppC; oligopeptide transport system permease protein
D MSC_0182 oppD; Oligopeptide ABC transporter, ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D MSC_0967 oppD; Oligopeptide ABC transporter, ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D MSC_0183 oppF; Oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0968 oppF; oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0983 oppF; Oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0716 abc; ABC transporter, permease component (vitamin B12?) K16785 ecfT; energy-coupling factor transport system permease protein
D MSC_0718 abc; ABC transporter, ATP-binding component (vitamin B12?) K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D MSC_0717 abc; ABC transporter, ATP-binding component (vitamin B12?) K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
C 02060 Phosphotransferase system (PTS) [PATH:mmy02060]
D MSC_0273 ptsI; PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D MSC_0768 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D MSC_0274 crr; PTS SYSTEM, GLUCOSE-SPECIFIC IIA COMPONENT K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D MSC_0054 ptsG; PTS system, glucose-specific IIABC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0873 ptsG; PTS system, glucose-specific, IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0860 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0130 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D MSC_0646 pts; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D MSC_0749 pts; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D MSC_0250 pts; PTS system, sucrose-specific IIC component (trunca K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D MSC_0019 EIIA-mtl; PTS SYSTEM, MANNITOL-PERMEASE IIA COMPONENT K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D MSC_0021 EIIBC-mtl; PTS SYSTEM, MANNITOL-PERMEASE IIBC COMPONENT K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D MSC_0394 pts; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D MSC_0395 conserved hypothetical transmembrane protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D MSC_0831 frvB; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D MSC_0842 frvA; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D MSC_0647 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D MSC_0832 fruB; 1-PHOSPHOFRUCTOKINASE K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:mmy03070]
D MSC_0473 Hypothetical transmembrane protein K12257 secDF; SecD/SecF fusion protein
D MSC_0726 secY; preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D MSC_1066 Conserved hypothetical transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D MSC_0089 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D MSC_0489 ftsY; Cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D MSC_0423 ffh; Signal recognition particle M54 protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:mmy02020]
D MSC_0485 pstS; Phosphate ABC transporter, substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein
D MSC_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:mmy02024]
D MSC_0702 Amino acid transporter K20265 gadC; glutamate:GABA antiporter
D MSC_0964 oppA; Oligopeptide ABC transporter, substrate-binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D MSC_0184 oppA; OLIGOPEPTIDE ABC transporter, substrate-binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D MSC_0180 oppB; Oligopeptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein
D MSC_0965 oppB; oligopeptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein
D MSC_0181 oppC; Oligopeptide ABC transporter, permease component I K15582 oppC; oligopeptide transport system permease protein
D MSC_0966 oppC; oligopeptide ABC transporter, permease component K15582 oppC; oligopeptide transport system permease protein
D MSC_0182 oppD; Oligopeptide ABC transporter, ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D MSC_0967 oppD; Oligopeptide ABC transporter, ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D MSC_0183 oppF; Oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0968 oppF; oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0983 oppF; Oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0975 oppF; oligopeptide ABC transporter, permease component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D MSC_1066 Conserved hypothetical transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D MSC_0473 Hypothetical transmembrane protein K12257 secDF; SecD/SecF fusion protein
D MSC_0726 secY; preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D MSC_0089 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D MSC_0489 ftsY; Cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D MSC_0423 ffh; Signal recognition particle M54 protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D MSC_0466 rpoD; RNA polymerase sigma-A factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D MSC_0253 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D MSC_0964 oppA; Oligopeptide ABC transporter, substrate-binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D MSC_0184 oppA; OLIGOPEPTIDE ABC transporter, substrate-binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D MSC_0180 oppB; Oligopeptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein
D MSC_0965 oppB; oligopeptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein
D MSC_0181 oppC; Oligopeptide ABC transporter, permease component I K15582 oppC; oligopeptide transport system permease protein
D MSC_0966 oppC; oligopeptide ABC transporter, permease component K15582 oppC; oligopeptide transport system permease protein
D MSC_0182 oppD; Oligopeptide ABC transporter, ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D MSC_0967 oppD; Oligopeptide ABC transporter, ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D MSC_0183 oppF; Oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0968 oppF; oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0983 oppF; Oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:mmy01000]
C 01001 Protein kinases [BR:mmy01001]
D MSC_0307 pkn; serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:mmy01009]
D MSC_0260 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D MSC_0308 protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:mmy01002]
D MSC_0584 lsp; Signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D MSC_0458 ThiJ/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D MSC_0767 Conserved hypothetical transmembrane protein, CAAX amino terminal protease family K07052 K07052; CAAX protease family protein
D MSC_0237 pepF; Oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D MSC_0696 pepO; endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D MSC_0504 peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D MSC_0235 pepA; leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D MSC_0163 pepA; LEUCYL AMINOPEPTIDASE K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D MSC_0554 Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D MSC_0724 map; methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D MSC_0357 pepQ; Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D MSC_0039 ftsH; ATP-dependent zinc metallopeptidase FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D MSC_1061 hypothetical protein K17734 aprX; serine protease AprX [EC:3.4.21.-]
D MSC_0454 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D MSC_0281 Hypothetical transmembrane protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D MSC_0107 Hypothetical transmembrane protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
C 01003 Glycosyltransferases [BR:mmy01003]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:mmy01005]
D MSC_0294 Hypothetical protein K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58]
C 01011 Peptidoglycan biosynthesis and degradation proteins
C 01004 Lipid biosynthesis proteins [BR:mmy01004]
D MSC_0480 plsX; fatty acid/phospholipid synthesis PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D MSC_0112 Conserved hypothetical transmembrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D MSC_0577 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases
C 01007 Amino acid related enzymes [BR:mmy01007]
D MSC_0131 gltX; glutamate-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D MSC_0686 tyrS; tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MSC_0358 trpS; tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D MSC_0959 cysS; cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D MSC_0599 argS; arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MSC_0012 metS; Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D MSC_0585 ileS; isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MSC_0303 valS; valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MSC_0709 leuS; leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MSC_0069 lysS; Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D MSC_0333 aspS; aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MSC_0080 asnS; asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D MSC_0334 hisS; histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D MSC_0464 glyS; glycine-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D MSC_0066 serS; Serine-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D MSC_0327 proS; proline-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D MSC_0262 thrS; threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D MSC_0178 alaS; alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MSC_0596 pheS; Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D MSC_0595 pheT; phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D MSC_0806 patB; aminotransferase (PLP-dependent) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D MSC_0794 patB; aminotransferase (PLP-dependent) K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:mmy00194]
D MSC_0884 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D MSC_0618 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D MSC_0885 atpD; ATP SYNTHASE BETA CHAIN K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D MSC_0886 atpG; ATP SYNTHASE GAMMA CHAIN K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D MSC_0619 atpA; ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D MSC_0887 atpA; ATP SYNTHASE ALPHA CHAIN K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D MSC_0888 atpH; ATP SYNTHASE DELTA CHAIN K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D MSC_0889 atpF; ATP SYNTHASE B CHAIN K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D MSC_0890 atpE; ATP SYNTHASE C CHAIN K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D MSC_0891 atpB; ATP SYNTHASE A CHAIN K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:mmy03000]
D MSC_0216 dcm; Cytosine-specific DNA-methyltransferase Sau96I K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D MSC_0645 Sucrose PTS repressor, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D MSC_0833 fruR; transcription repressor of fructose operon K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D MSC_0691 fur; Ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D MSC_0612 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D MSC_0592 Conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:mmy03021]
D MSC_0721 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D MSC_1008 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D MSC_1009 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D MSC_0133 Hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D MSC_0466 rpoD; RNA polymerase sigma-A factor K03086 rpoD; RNA polymerase primary sigma factor
D MSC_0352 nusA; transcriptional terminator K02600 nusA; transcription termination/antitermination protein NusA
D MSC_0102 nusB; transcription termination factor nusB K03625 nusB; transcription antitermination protein NusB
D MSC_0962 nusG; TRANSCRIPTION ANTITERMINATION PROTEIN NUSG K02601 nusG; transcription termination/antitermination protein NusG
D MSC_0296 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:mmy03019]
D MSC_0479 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D MSC_0670 Conserved hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D MSC_0300 CONSERVED HYPOTEHTICAL PROTEIN K12574 rnj; ribonuclease J [EC:3.1.-.-]
D MSC_0422 Conserved hypothetical transmembrane protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D MSC_0856 rnr; Ribonulease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D MSC_0497 cbf; CMP-BINDING-FACTOR K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D MSC_0469 deaD; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D MSC_0253 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MSC_0260 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D MSC_0610 dnaK; HEAT SHOCK PROTEIN 70 (CHAPERONE) K04043 dnaK; molecular chaperone DnaK
C 03041 Spliceosome
C 03011 Ribosome [BR:mmy03011]
D MSC_0608 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D MSC_0739 rpsC; 30S RIBOSOMAL PROTEIN S3 K02982 RP-S3; small subunit ribosomal protein S3
D MSC_0278 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D MSC_0728 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D MSC_0027 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D MSC_0158 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D MSC_0731 rpsH; Ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D MSC_0712 rpsI; 30S RIBOSOMAL PROTEIN S9 K02996 RP-S9; small subunit ribosomal protein S9
D MSC_0746 rpsJ; 30S RIBOSOMAL PROTEIN S10 K02946 RP-S10; small subunit ribosomal protein S10
D MSC_0722 rpsK; 30S RIBOSOMAL PROTEIN S11 K02948 RP-S11; small subunit ribosomal protein S11
D MSC_0157 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D MSC_0723 rpsM; 30S RIBOSOMAL PROTEIN S13 K02952 RP-S13; small subunit ribosomal protein S13
D MSC_0347 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D MSC_0425 rpsP; 30S RIBOSOMAL PROTEIN S16 K02959 RP-S16; small subunit ribosomal protein S16
D MSC_0736 rpsQ; 30S RIBOSOMAL PROTEIN S17 K02961 RP-S17; small subunit ribosomal protein S17
D MSC_0025 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D MSC_0741 rpsS; 30S RIBOSOMAL PROTEIN S19 K02965 RP-S19; small subunit ribosomal protein S19
D MSC_0086 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D MSC_0541 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D MSC_0995 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D MSC_0742 rplB; 50S RIBOSOMAL PROTEIN L2 K02886 RP-L2; large subunit ribosomal protein L2
D MSC_0745 rplC; 50S RIBOSOMAL PROTEIN L3 K02906 RP-L3; large subunit ribosomal protein L3
D MSC_0744 rplD; 50S RIBOSOMAL PROTEIN L4 K02926 RP-L4; large subunit ribosomal protein L4
D MSC_0732 rplE; 50S RIBOSOMAL PROTEIN L5 K02931 RP-L5; large subunit ribosomal protein L5
D MSC_0730 rplF; 50S RIBOSOMAL PROTEIN L6 K02933 RP-L6; large subunit ribosomal protein L6
D MSC_0955 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D MSC_1006 rplJ; 50S RIBOSOMAL PROTEIN L10 K02864 RP-L10; large subunit ribosomal protein L10
D MSC_0994 rplK; 50S Ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D MSC_1007 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D MSC_0713 rplM; 50S RIBOSOMAL PROTEIN L13 K02871 RP-L13; large subunit ribosomal protein L13
D MSC_0735 rplN; 50S RIBOSOMAL PROTEIN L14 K02874 RP-L14; large subunit ribosomal protein L14
D MSC_0727 rplO; 50S RIBOSOMAL PROTEIN L15 K02876 RP-L15; large subunit ribosomal protein L15
D MSC_0738 rplP; 50S RIBOSOMAL PROTEIN L16 K02878 RP-L16; large subunit ribosomal protein L16
D MSC_0720 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D MSC_0729 rplR; 50S RIBOSOMAL PROTEIN L18 K02881 RP-L18; large subunit ribosomal protein L18
D MSC_0428 rplS; 50S RIBOSOMAL PROTEIN L19 K02884 RP-L19; large subunit ribosomal protein L19
D MSC_0223 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D MSC_0562 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D MSC_0740 rplV; 50S RIBOSOMAL PROTEIN L22 K02890 RP-L22; large subunit ribosomal protein L22
D MSC_0743 rplW; 50S RIBOSOMAL PROTEIN L23 K02892 RP-L23; large subunit ribosomal protein L23
D MSC_0734 rplX; 50S RIBOSOMAL PROTEIN L24 K02895 RP-L24; large subunit ribosomal protein L24
D MSC_0560 rpmA; 50S RIBOSOMAL PROTEI L27 K02899 RP-L27; large subunit ribosomal protein L27
D MSC_0483 rpmB; 50S RIBOSOMAL PROTEIN L28 K02902 RP-L28; large subunit ribosomal protein L28
D MSC_0737 rpmC; 50S RIBOSOMAL PROTEIN L29 K02904 RP-L29; large subunit ribosomal protein L29
D MSC_0146 rpme; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D MSC_0593 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D MSC_1068 rpmH; 50S RIBOSOMAL PROTEIN L34 K02914 RP-L34; large subunit ribosomal protein L34
D MSC_0222 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D MSC_rrnA-5S rrnA-5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D MSC_rrnB-5S rrnB-5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D MSC_rrnA-16S rrnA-16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MSC_rrnB-16S rrnB-16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MSC_rrnA-23S rrnA-23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D MSC_rrnB-23S rrnB-23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:mmy03009]
D MSC_0479 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D MSC_0462 era; GTP-BINDING PROTEIN ERA HOMOLOG K03595 era; GTPase
D MSC_0439 obg; GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D MSC_0352 nusA; transcriptional terminator K02600 nusA; transcription termination/antitermination protein NusA
D MSC_0102 nusB; transcription termination factor nusB K03625 nusB; transcription antitermination protein NusB
D MSC_0962 nusG; TRANSCRIPTION ANTITERMINATION PROTEIN NUSG K02601 nusG; transcription termination/antitermination protein NusG
D MSC_0004 ksgA; Dimethyladenosine transferase KsgA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D MSC_0217 sun; Sun family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D MSC_0219 DNA METHYLASE K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D MSC_0912 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D MSC_0591 MraW methylase family protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D MSC_0564 Tetrapyrrole methylas family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D MSC_0099 hlyA; hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D MSC_0960 spoU; rRNA Methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D MSC_0424 CONSERVED HYPOTHETICAL PROTEIN K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D MSC_0387 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D MSC_0766 rluC; RNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D MSC_0583 rluD; ribosomal large subunit pseudouridylate synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D MSC_0426 rimM; 16S RRNA PROCESSING PROTEIN RIMM K02860 rimM; 16S rRNA processing protein RimM
D MSC_0255 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D MSC_0469 deaD; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D MSC_0306 Conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D MSC_0408 conserved GTPase of unknown function K03977 engA; GTPase
D MSC_0429 Conserved hypothetical GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D MSC_0548 Conserved hypothetical GTPase of unknown function K06948 yqeH; 30S ribosome assembly GTPase
D MSC_0153 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D MSC_0475 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D MSC_0335 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D MSC_0353 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D MSC_0461 Conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D MSC_0914 GTP-BINDING PROTEIN K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:mmy03016]
D MSC_0327 proS; proline-tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D MSC_0585 ileS; isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D MSC_0709 leuS; leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MSC_0012 metS; Methionine-tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D MSC_0599 argS; arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MSC_0069 lysS; Lysine-tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D MSC_0333 aspS; aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MSC_0178 alaS; alanine-tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D MSC_0080 asnS; asparagine-tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D MSC_0464 glyS; glycine-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D MSC_0262 thrS; threonine-tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D MSC_0066 serS; Serine-tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D MSC_0959 cysS; cysteine-tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D MSC_0303 valS; valine-tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D MSC_0334 hisS; histidine-tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D MSC_0596 pheS; Phenylalanine-tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D MSC_0595 pheT; phenylalanine-tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D MSC_0686 tyrS; tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MSC_0358 trpS; tryptophan-tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D MSC_0498 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D MSC_0166 METHYLTRANSFERASE K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D MSC_0715 truA; pseudouridylate synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D MSC_0336 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D MSC_0153 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D MSC_0085 trmE; tRNA modification GTPase, TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D MSC_1017 gidA; Glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D MSC_1042 gidA; Glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D MSC_1067 rnpA; Ribonuclease P (protein C5) K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D MSC_0131 gltX; glutamate-tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D MSC_0049 codA; CYTOSINE DEAMINASE K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D MSC_0068 Transcriptional regulator (involved in nitrogen regulation; NifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D MSC_0494 gid; glucose inhibited division protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D MSC_0375 gidA; glucose-inhibited division protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D MSC_0427 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D MSC_0467 Conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D MSC_0615 spoU; rRNA Methylase (Spou-family) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D MSC_0508 spoU; rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D MSC_0447 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D MSC_0280 thiI; Thiamin biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D MSC_0042 Conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D MSC_0312 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D MSC_0083 gcp; O-SIALOGLYCOPROTEIN ENDOPEPTIDASE K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D MSC_0311 Conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D MSC_0856 rnr; Ribonulease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:mmy03012]
D MSC_0349 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D MSC_0221 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D MSC_0607 tsf; Elongation factor TS K02357 tsf; elongation factor Ts
D MSC_0160 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu
D MSC_0159 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D MSC_0150 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D MSC_0600 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D MSC_0151 hemK; protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D MSC_0954 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D MSC_0451 efp; Elongation factor P K02356 efp; elongation factor P
C 03110 Chaperones and folding catalysts [BR:mmy03110]
D MSC_0613 clpB; ATP dependant protease ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D MSC_0610 dnaK; HEAT SHOCK PROTEIN 70 (CHAPERONE) K04043 dnaK; molecular chaperone DnaK
D MSC_0609 dnaJ; heat shock protein DnaJ (chaperone) K03686 dnaJ; molecular chaperone DnaJ
D MSC_0031 hsp33; HEAT SHOCK PROTEIN (33 kDa chaperonin) K04083 hslO; molecular chaperone Hsp33
D MSC_0611 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D MSC_0039 ftsH; ATP-dependent zinc metallopeptidase FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D MSC_0891 atpB; ATP SYNTHASE A CHAIN K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D MSC_0072 trxA; THIOREDOXIN K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:mmy04131]
D MSC_0845 Glycosyl hydrolases family protein K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D MSC_0679 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D MSC_0261 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:mmy03032]
D MSC_0216 dcm; Cytosine-specific DNA-methyltransferase Sau96I K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D MSC_0410 DNA-binding protein HU (HB) K03530 hupB; DNA-binding protein HU-beta
D MSC_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D MSC_0956 dnaC; replicative DNA helicase DnaC K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D MSC_0465 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D MSC_0681 dnaB; Chromosome replication initiation/membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D MSC_0680 dnaI; PRIMOSOMAL PROTEIN K11144 dnaI; primosomal protein DnaI
D MSC_0026 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D MSC_0684 dnaE; DNA polymerase III alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MSC_0355 polC; DNA polymerase III alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D MSC_0002 dnaN; DNA POLYMERASE III, BETA CHAIN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MSC_0945 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D MSC_0045 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D MSC_0048 dnaX; DNA polymerase III gamma-tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MSC_0430 rnhB; ribonuclease H II K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D MSC_0683 polA; DNA POLYMERASE I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D MSC_0764 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D MSC_0200 mod; adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D MSC_0007 gyrA; DNA Gyrase Subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D MSC_0006 gyrB; DNA Gyrase Subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D MSC_0511 parC; TOPOISOMERASE IV SUBUNIT A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D MSC_0510 parE; DNA TOPOISOMERASE IV SUBUNIT B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D MSC_0931 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:mmy03036]
D MSC_0216 dcm; Cytosine-specific DNA-methyltransferase Sau96I K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D MSC_0479 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D MSC_0410 DNA-binding protein HU (HB) K03530 hupB; DNA-binding protein HU-beta
D MSC_0001 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D MSC_0476 P115-like protein with SMC_C motif K03529 smc; chromosome segregation protein
D MSC_0385 Conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D MSC_0386 Conserved hypothetical protein K06024 scpB; segregation and condensation protein B
D MSC_0588 ftsZ; cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D MSC_0417 Conserved hypothetical transmembrane protein K04074 divIVA; cell division initiation protein
D MSC_0587 Conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D MSC_0511 parC; TOPOISOMERASE IV SUBUNIT A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D MSC_0510 parE; DNA TOPOISOMERASE IV SUBUNIT B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D MSC_1017 gidA; Glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D MSC_1042 gidA; Glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D MSC_0912 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D MSC_0494 gid; glucose inhibited division protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D MSC_0375 gidA; glucose-inhibited division protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D MSC_0838 fic; cell filamentation protein Fic-related protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D MSC_0192 fic; Conserved hypothetical protein, Fic protein family K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D MSC_0290 GTP-binding protein K03978 engB; GTP-binding protein
D MSC_0935 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:mmy03400]
D MSC_0496 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D MSC_0682 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D MSC_0105 nfo; endodeoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D MSC_0764 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D MSC_0683 polA; DNA POLYMERASE I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D MSC_0943 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D MSC_0944 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D MSC_0297 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D MSC_0769 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D MSC_1008 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D MSC_1009 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D MSC_0721 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D MSC_0133 Hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D MSC_0101 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D MSC_0100 xseB; Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D MSC_0684 dnaE; DNA polymerase III alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D MSC_0355 polC; DNA polymerase III alpha chain K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D MSC_0002 dnaN; DNA POLYMERASE III, BETA CHAIN K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D MSC_0945 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D MSC_0045 holB; DNA polymerase III delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D MSC_0048 dnaX; DNA polymerase III gamma-tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D MSC_0026 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D MSC_0200 mod; adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D MSC_0512 recD; Exodeoxyribonuclease V alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D MSC_0649 recD; EXODEOXYRIBONUCLEASE V ALPHA CHAIN K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D MSC_0421 recA; recombination protein recA K03553 recA; recombination protein RecA
D MSC_0542 ruvA; holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D MSC_0543 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D MSC_0378 conserved hypothetical protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D MSC_0463 recO; DNA repair protein recO K03584 recO; DNA repair protein RecO (recombination protein O)
D MSC_0047 recR; DNA REPAIR PROTEIN RecR K06187 recR; recombination protein RecR
D MSC_0416 recU; Recombination protein U K03700 recU; recombination protein U
D MSC_0007 gyrA; DNA Gyrase Subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D MSC_0006 gyrB; DNA Gyrase Subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D MSC_0931 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D MSC_0410 DNA-binding protein HU (HB) K03530 hupB; DNA-binding protein HU-beta
D MSC_0549 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D MSC_0853 nrdE; ribonucleoside-diphosphate reductase alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D MSC_0855 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D MSC_0148 dhh_(mgpA); DHH family protein (MgpA-like protein) K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:mmy03029]
D MSC_0349 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D MSC_0221 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D MSC_0607 tsf; Elongation factor TS K02357 tsf; elongation factor Ts
D MSC_0160 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu
D MSC_0159 fusA; Translation elongation factor G K02355 fusA; elongation factor G
D MSC_0462 era; GTP-BINDING PROTEIN ERA HOMOLOG K03595 era; GTPase
D MSC_0686 tyrS; tyrosine-tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D MSC_0709 leuS; leucine-tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D MSC_0333 aspS; aspartate-tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D MSC_0464 glyS; glycine-tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D MSC_0599 argS; arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D MSC_0762 gatA; glutamyl-tRNA (Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D MSC_0761 gatB; glutamyl-tRNA (Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D MSC_0763 gatC; Glutamyl-tRNA (Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D MSC_0026 ssb; Single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D MSC_0610 dnaK; HEAT SHOCK PROTEIN 70 (CHAPERONE) K04043 dnaK; molecular chaperone DnaK
D MSC_0611 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D MSC_0609 dnaJ; heat shock protein DnaJ (chaperone) K03686 dnaJ; molecular chaperone DnaJ
D MSC_1066 Conserved hypothetical transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:mmy02000]
D MSC_0434 abc; ABC transporter, permease and ATP-binding componen K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D MSC_0435 abc; ABC transporter, permease and ATP-binding componen K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D MSC_0226 potCD; Spermidine/putrescine ABC transporter, permease and substrate-binding component K11070 potC; spermidine/putrescine transport system permease protein
D MSC_0225 potB; spermidine/putrescine ABC transporter permease component K11071 potB; spermidine/putrescine transport system permease protein
D MSC_0224 potA; spermidine/putrescine ABC transporter ATP-binding component K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D MSC_0516 gtsA; Glycerol ABC transporter, ATP-binding component K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D MSC_0011 rbsB; Ribose/galactose ABC transporter, substrate-binding component K07335 bmpA; basic membrane protein A and related proteins
D MSC_0009 rbsC-1; Ribose/Galactose ABC transporter, permease component I K23535 nupB; general nucleoside transport system permease protein
D MSC_0008 rbsC-2; Ribose/Galactose ABC transporter, permease component II K23536 nupC; general nucleoside transport system permease protein
D MSC_0010 rbsA; Ribose/Galactose ABC transporter, ATP-binding component K23537 nupA; general nucleoside transport system ATP-binding protein
D MSC_0517 gtsB; Glycerol ABC transporter, permease component K02025 ABC.MS.P; multiple sugar transport system permease protein
D MSC_0518 gtsC; Glycerol ABC transporter, permease component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D MSC_0485 pstS; Phosphate ABC transporter, substrate-binding component K02040 pstS; phosphate transport system substrate-binding protein
D MSC_0486 pstCA; phosphate ABC transport system, permease component K02037 pstC; phosphate transport system permease protein
D MSC_0487 pstB; Phosphate ABC transporter, ATP-binding component K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D MSC_0790 phnD; Alkylphosphonate ABC transporter, substrate-bindin K02044 phnD; phosphonate transport system substrate-binding protein
D MSC_0079 phnD?; prolipoprotein, putative phosphonate ABC transport K02044 phnD; phosphonate transport system substrate-binding protein
D MSC_0804 abc; ABC TRANSPORTER, substrate-binding component K02044 phnD; phosphonate transport system substrate-binding protein
D MSC_0077 phnE; phosphonate ABC transporter, permease component K02042 phnE; phosphonate transport system permease protein
D MSC_0788 phnB; Alkylphosphonate ABC transporter, permease component K02042 phnE; phosphonate transport system permease protein
D MSC_0078 phnC; phosphonate ABC transporter, ATP-binding component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D MSC_0789 phnC; alkylphosphonate ABC transporter, ATP-binding component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D MSC_0803 phnC; alkylphosphonate ABC transporter, ATP-binding component K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D MSC_0964 oppA; Oligopeptide ABC transporter, substrate-binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D MSC_0184 oppA; OLIGOPEPTIDE ABC transporter, substrate-binding component K15580 oppA; oligopeptide transport system substrate-binding protein
D MSC_0180 oppB; Oligopeptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein
D MSC_0965 oppB; oligopeptide ABC transporter, permease component K15581 oppB; oligopeptide transport system permease protein
D MSC_0181 oppC; Oligopeptide ABC transporter, permease component I K15582 oppC; oligopeptide transport system permease protein
D MSC_0966 oppC; oligopeptide ABC transporter, permease component K15582 oppC; oligopeptide transport system permease protein
D MSC_0182 oppD; Oligopeptide ABC transporter, ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D MSC_0967 oppD; Oligopeptide ABC transporter, ATP-binding component K15583 oppD; oligopeptide transport system ATP-binding protein
D MSC_0183 oppF; Oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0968 oppF; oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0983 oppF; Oligopeptide ABC transporter, ATP-binding component K10823 oppF; oligopeptide transport system ATP-binding protein
D MSC_0975 oppF; oligopeptide ABC transporter, permease component K02032 ddpF; peptide/nickel transport system ATP-binding protein
D MSC_0716 abc; ABC transporter, permease component (vitamin B12?) K16785 ecfT; energy-coupling factor transport system permease protein
D MSC_0718 abc; ABC transporter, ATP-binding component (vitamin B12?) K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D MSC_0717 abc; ABC transporter, ATP-binding component (vitamin B12?) K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D MSC_0705 Hypothetical transmembrane protein K25147 berB; beta-exotoxin I transport system permease protein
D MSC_0704 abc; ABC transporter, ATP-binding component (Na+?) K25148 berA; beta-exotoxin I transport system ATP-binding protein
D MSC_0919 Conserved hypothetical transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D MSC_0324 abc; ABC transporter, permease component (Na+?) K01992 ABC-2.P; ABC-2 type transport system permease protein
D MSC_0323 abc; ABC transporter, ATP-binding component (Na+?) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D MSC_0398 natA; Na+ ABC transporter, ATP-binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D MSC_0714 Predicted permease K02004 ABC.CD.P; putative ABC transport system permease protein
D MSC_0598 Hypothetical transmembrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D MSC_0030 abc; ABC TRANSPORTER, ATP-BINDING PROTEIN (Antibiotic?) K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D MSC_0273 ptsI; PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D MSC_0768 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D MSC_0274 crr; PTS SYSTEM, GLUCOSE-SPECIFIC IIA COMPONENT K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D MSC_0054 ptsG; PTS system, glucose-specific IIABC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0873 ptsG; PTS system, glucose-specific, IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0860 ptsG; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D MSC_0130 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D MSC_0646 pts; PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D MSC_0749 pts; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D MSC_0250 pts; PTS system, sucrose-specific IIC component (trunca K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D MSC_0842 frvA; PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D MSC_0831 frvB; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D MSC_0019 EIIA-mtl; PTS SYSTEM, MANNITOL-PERMEASE IIA COMPONENT K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D MSC_0021 EIIBC-mtl; PTS SYSTEM, MANNITOL-PERMEASE IIBC COMPONENT K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D MSC_0394 pts; PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D MSC_0395 conserved hypothetical transmembrane protein K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D MSC_0277 CONSERVED HYPOTHETICAL PROTEIN K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D MSC_0257 glpF; glycerol uptake facilitator K02440 glpF; glycerol uptake facilitator
D MSC_0167 mgtE; MG2+ TRANSPORT PROTEIN K06213 mgtE; magnesium transporter
D MSC_0500 Hypothetical prolipoprotein K21449 ata; trimeric autotransporter adhesin
D MSC_0702 Amino acid transporter K20265 gadC; glutamate:GABA antiporter
D MSC_0252 hypothetical transmembrane protein K03297 emrE; small multidrug resistance pump
D MSC_0759 Sodium transport protein K03498 trkH; trk/ktr system potassium uptake protein
D MSC_0760 Conserved hypothetical protein K03499 trkA; trk/ktr system potassium uptake protein
D MSC_0035 MALATE PERMEASE K24180 mleP; malate permease and related proteins
C 02044 Secretion system [BR:mmy02044]
D MSC_0581 dctD; dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D MSC_0075 Hypothetical transmembrane protein K02238 comEC; competence protein ComEC
D MSC_0076 comEC; competence protein ComEC K02238 comEC; competence protein ComEC
D MSC_0089 secA; preprotein translocase SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D MSC_0473 Hypothetical transmembrane protein K12257 secDF; SecD/SecF fusion protein
D MSC_0726 secY; preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D MSC_0423 ffh; Signal recognition particle M54 protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D MSC_0489 ftsY; Cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D MSC_1066 Conserved hypothetical transmembrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:mmy02042]
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:mmy04812]
D MSC_0588 ftsZ; cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
C 04147 Exosome [BR:mmy04147]
D MSC_0253 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D MSC_0679 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D MSC_0678 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D MSC_0261 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D MSC_0610 dnaK; HEAT SHOCK PROTEIN 70 (CHAPERONE) K04043 dnaK; molecular chaperone DnaK
D MSC_0505 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D MSC_0160 tufA; translation elongation factor Tu K02358 tuf; elongation factor Tu
D MSC_0498 hit; histidine triad protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D MSC_0532 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D MSC_0725 adk; ADENYLATE KINASE K00939 adk; adenylate kinase [EC:2.7.4.3]
D MSC_0474 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D MSC_0258 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D MSC_0268 pdhD; dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0544 pdhD; Dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D MSC_0823 tpi; TRIOSEPHOSPHATE ISOMERASE K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:mmy02048]
D MSC_0200 mod; adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D MSC_0186 DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D MSC_0951 dam; Adenine-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D MSC_0216 dcm; Cytosine-specific DNA-methyltransferase Sau96I K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D MSC_0588 ftsZ; cell division protein ftsZ K03531 ftsZ; cell division protein FtsZ
D MSC_0511 parC; TOPOISOMERASE IV SUBUNIT A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D MSC_0510 parE; DNA TOPOISOMERASE IV SUBUNIT B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:mmy04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:mmy03100]
D MSC_tRNA_f_6 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D MSC_tRNA_f_2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MSC_tRNA_f_4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D MSC_tRNA_r_14 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D MSC_tRNA_f_11 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D MSC_tRNA_f_13 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D MSC_tRNA_r_24 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D MSC_tRNA_r_15 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D MSC_tRNA_f_1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D MSC_tRNA_r_19 tRNA-His K14226 tRNA-His; tRNA His
D MSC_tRNA_r_18 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D MSC_tRNA_r_29 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MSC_tRNA_f_3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MSC_tRNA_r_26 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D MSC_tRNA_r_25 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D MSC_tRNA_r_28 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D MSC_tRNA_r_27 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D MSC_tRNA_f_7 tRNA-Met K14230 tRNA-Met; tRNA Met
D MSC_tRNA_f_8 tRNA-Met K14230 tRNA-Met; tRNA Met
D MSC_tRNA_f_10 tRNA-Met K14230 tRNA-Met; tRNA Met
D MSC_tRNA_f_12 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D MSC_tRNA_f_5 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D MSC_tRNA_f_9 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MSC_tRNA_f_0 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D MSC_tRNA_r_17 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D MSC_tRNA_r_22 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D MSC_tRNA_r_21 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D MSC_tRNA_r_23 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D MSC_tRNA_r_16 tRNA-Val K14237 tRNA-Val; tRNA Val
D MSC_tRNA_r_20 tRNA-Trp K14238 tRNA-Sec; tRNA Sec
D MSC_rrnA-16S rrnA-16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MSC_rrnB-16S rrnB-16S; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D MSC_rrnA-23S rrnA-23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D MSC_rrnB-23S rrnB-23S; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D MSC_rrnA-5S rrnA-5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D MSC_rrnB-5S rrnB-5S; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
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A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D MSC_0034 ldh; D-LACTATE DEHYDROGENASE K25634 hgdH; 2-oxoglutarate reductase [EC:1.1.1.399]
D MSC_0029 acpD; Acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D MSC_0774 msrA; PEPTIDE METHIONINE SULFOXIDE REDUCTASE K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D MSC_0053 AhpC/TSA family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D MSC_0703 arcB; ornithine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D MSC_0937 Hypothetical transmembrane protein K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D MSC_0939 lgt(-rpoD); Prolipoprotein diacylglyceryl transferase and tran K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D MSC_0481 PREDICTED KINASE RELATED TO HYDROXYACETONE KINASE K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D MSC_0940 ptsK; Hpr serine kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D MSC_0947 Deoxyribonuclease, TatD related K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D MSC_0003 Primase-related protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D MSC_0162 aglA; alpha-xylosidase or alpha-glucosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D MSC_0220 pdf; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D MSC_0807 translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D MSC_0795 translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D MSC_0289 ctp; cation-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D MSC_0868 mgtA; Mg(2+) transport ATPase, P-type K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D MSC_0881 mgtA; MG(2+) TRANSPORT ATPASE K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D MSC_0907 mgtA; Mg2+ transport ATPase, P-type 1 K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D MSC_0502 nifU; NITROGEN FIXATION PROTEIN NIFU K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D MSC_0689 Conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D MSC_0854 nrdI; Ribonucleotide reductase K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D MSC_0028 csp; COLD SHOCK PROTEIN K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D MSC_0453 FKBP-type peptidyl-prolyl isomerase K03545 tig; trigger factor
D MSC_0857 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D MSC_0328 rnh; ribonuclease H-related protein K06993 K06993; ribonuclease H-related protein
D MSC_0361 Conserved hypothetical transmembrane protein K09760 rmuC; DNA recombination protein RmuC
D MSC_0455 putative ATPase, AAA family K07478 ycaJ; putative ATPase
D MSC_0016 tnpA_IS1296sq; Transposase IS1296SQ (ORFA) K07483 K07483; transposase
D MSC_0056 tnpA_IS1296ie; Transposase IS1296IE (ORFA) K07483 K07483; transposase
D MSC_0662 tnpA_IS1296ab_b; Transposase IS1296AB_B (ORFA) K07483 K07483; transposase
D MSC_0630 tnpA_IS1296ll; Transposase IS1296LL (ORFA) K07483 K07483; transposase
D MSC_0674 tnpA_IS1296qt; Transposase IS1296QT (ORFA) K07483 K07483; transposase
D MSC_0138 tnpA_IS1296mp; Transposase IS1296MP (ORFA) K07483 K07483; transposase
D MSC_0141 tnpA_IS1296eh; Transposase IS1296EH (ORFA) K07483 K07483; transposase
D MSC_0173 tnpA_IS1296uk; Transposase IS1296UK (ORFA; extended into IS1634BP K07483 K07483; transposase
D MSC_0232 tnpA_IS1296px; Transposase IS1296PX (ORFA) K07483 K07483; transposase
D MSC_0238 tnpA_IS1296fj; Transposase IS1296FJ (ORFA) K07483 K07483; transposase
D MSC_0898 tnpA_IS1296ac_r; Transposase IS1296AC_R (ORFA) K07483 K07483; transposase
D MSC_0905 tnpA_IS1296ds; Transposase IS1296DS (ORFA) K07483 K07483; transposase
D MSC_0851 tnpA_IS1296gz; Transposase IS1296GZ (ORFA) K07483 K07483; transposase
D MSC_0015 tnpB_IS1296sq; transposase IS1296SQ (ORFB) K07497 K07497; putative transposase
D MSC_0055 tnpB_IS1296ie; transposase IS1296IE (ORFB) K07497 K07497; putative transposase
D MSC_0663 tnpB_IS1296ab_b; Transposase IS1296AB_B (ORFB) K07497 K07497; putative transposase
D MSC_0629 tnpB_IS1296ll; Transposase IS1296LL (ORFB; extended) K07497 K07497; putative transposase
D MSC_0699 tnp_IS1138-like; transposase (IS1138-like) K07497 K07497; putative transposase
D MSC_0844 tnpB_IS1296hv; Transposase IS1296HV (ORFB) K07497 K07497; putative transposase
D MSC_0174 tnpB_IS1296uk; Transposase IS1296UK (ORFB) K07497 K07497; putative transposase
D MSC_0137 tnpB_IS1296mp; Transposase IS1296MP (ORFB) K07497 K07497; putative transposase
D MSC_0211 tnpB_IS1296ji; Transposase IS1296JI (ORFB) K07497 K07497; putative transposase
D MSC_0239 tnpB_IS1296fj; Transposase IS1296FJ (ORFB) K07497 K07497; putative transposase
D MSC_0246 tnpB_IS1296od; Transposase IS1296OD (ORFB) K07497 K07497; putative transposase
D MSC_0899 tnpB_IS1296ac_r; Transposase IS1296AC_R (ORFB) K07497 K07497; putative transposase
D MSC_0904 tnpB_IS1296ds; Transposase IS1296DS (ORFB) K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D MSC_0908 Amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D MSC_0910 Amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D MSC_0558 Sodium:solute symporter family K03307 TC.SSS; solute:Na+ symporter, SSS family
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
D MSC_0214 ELONGATION FACTOR TU FAMILY PROTEIN K06207 typA; GTP-binding protein
C 99992 Structural proteins
C 99994 Others
D MSC_0488 phoU; phosphate transport system regulator PhoU K02039 phoU; phosphate transport system protein
D MSC_0493 cut; COPPER HOMEOSTASIS PROTEIN K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D MSC_0688 pheT; phenylalanine-tRNA ligase K06878 K06878; tRNA-binding protein
C 99997 Function unknown
D MSC_0132 Conserved hypothetical protein with HD domain K06885 K06885; uncharacterized protein
D MSC_0586 Conserved hypothetical protein K06889 K06889; uncharacterized protein
D MSC_0820 hypothetical protein K06889 K06889; uncharacterized protein
D MSC_0082 Putative hydrolase from alpha/beta family K06889 K06889; uncharacterized protein
D MSC_0116 Conserved hypothetical transmembrane protein K06889 K06889; uncharacterized protein
D MSC_1018 proton/glutamate symporter K06956 K06956; uncharacterized protein
D MSC_1043 proton/glutamate symporter K06956 K06956; uncharacterized protein
D MSC_0233 Conserved hypothetical protein K07133 K07133; uncharacterized protein
D MSC_0036 Conserved hypothetical protein K07133 K07133; uncharacterized protein
D MSC_0243 CONSERVED HYPOTHETICAL PROTEIN K07133 K07133; uncharacterized protein
D MSC_0093 Conserved HYPOTHETICAL PROTEIN K07133 K07133; uncharacterized protein
D MSC_0490 gene regulatory 13K protein K09787 K09787; uncharacterized protein
D MSC_0839 Conserved hypothetical protein K09963 K09963; uncharacterized protein
D MSC_0371 conserved hypothetical transmembrane protein K09976 K09976; uncharacterized protein
D MSC_0561 Conserved hypothetical protein K07584 ysxB; uncharacterized protein
D MSC_0351 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 21, 2024