+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Merops nubicus (carmine bee-eater)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        103776678 POLR2B; DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        103770779 POLR2C; DNA-directed RNA polymerase II subunit RPB3	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        103780999 POLR2J; DNA-directed RNA polymerase II subunit RPB11-a	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        103778999 POLR2D; DNA-directed RNA polymerase II subunit RPB4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        103782015 POLR2M; protein GRINL1A	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        103776615 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103778176 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103770387 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        103769497 GTF2A1L; TFIIA-alpha and beta-like factor	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        103771364 GTF2A1; transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        103773152 GTF2A2; transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        103771755 GTF2B; transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        103776806 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103771644 TBP; TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103772286 TBPL1; TATA box-binding protein-like protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103779268 transcription initiation factor TFIID subunit 1-like	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        103771449 TAF2; transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        103781204 TAF3; transcription initiation factor TFIID subunit 3	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        103773790 TAF4; transcription initiation factor TFIID subunit 4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        103776044 TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        103778599 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        103770985 TAF7L; transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        103776724 TAF8; transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        103777757 TAF10; transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        103778282 TAF11; transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        103782257 TAF12; transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103772781 TAF13; transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        103769019 FUS; RNA-binding protein FUS	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      TFIIE
E        103773394 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        103775043 GTF2E1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        103770983 GTF2E2; transcription initiation factor IIE subunit beta	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
D      TFIIH
E        103778716 GTF2H1; general transcription factor IIH subunit 1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        103780613 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        103775694 GTF2H3; general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        103768007 ERCC3; TFIIH basal transcription factor complex helicase XPB subunit	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        103779451 GTF2H5; general transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        103777677 CDK7; cyclin-dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        103774243 MNAT1; CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        103771228 CCNH; cyclin-H	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        103780079 MED6; mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        103780658 MED8; mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        103781131 MED17; mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        103776024 MED18; mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        103770411 MED22; mediator of RNA polymerase II transcription subunit 22	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        103779862 MED28; mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        103776634 MED30; mediator of RNA polymerase II transcription subunit 30	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        103776830 MED1; mediator of RNA polymerase II transcription subunit 1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        103774270 MED7; mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        103767885 MED9; mediator of RNA polymerase II transcription subunit 9	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        103782071 MED10; mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        103772700 MED21; mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        103776968 MED31; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        103776521 MED14; mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        103770853 MED15; mediator of RNA polymerase II transcription subunit 15 isoform X1	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        103772848 MED16; mediator of RNA polymerase II transcription subunit 16	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        103770942 CDK8; cyclin-dependent kinase 8	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        103771590 cyclin-dependent kinase 19	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        103775752 CCNC; cyclin-C	K15161 CCNC; cyclin-C 
E        103773914 MED12L; mediator of RNA polymerase II transcription subunit 12-like protein	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        103769863 MED12; mediator of RNA polymerase II transcription subunit 12	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        103768937 MED13; mediator of RNA polymerase II transcription subunit 13	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        103775745 MED13L; mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        103773197 MED23; mediator of RNA polymerase II transcription subunit 23	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        103774756 MED24; mediator of RNA polymerase II transcription subunit 24	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        103775129 MED26; mediator of RNA polymerase II transcription subunit 26	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        103777223 MED27; mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        103774437 histone acetyltransferase KAT2B	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        103779628 TRRAP; transformation/transcription domain-associated protein	K08874 TRRAP; transformation/transcription domain-associated protein 
E        103775605 SUPT3H; transcription initiation protein SPT3 homolog	K11313 SUPT3H; transcription initiation protein SPT3 
E        103773230 TADA2A; transcriptional adapter 2-alpha	K11314 TADA2A; transcriptional adapter 2-alpha 
E        103777406 TADA2B; transcriptional adapter 2-beta	K15127 TADA2B; transcriptional adapter 2-beta 
E        103775474 TADA1; transcriptional adapter 1	K11317 TADA1; transcriptional adapter 1 
E        103771449 TAF2; transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        103773790 TAF4; transcription initiation factor TFIID subunit 4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        103776044 TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        103778599 transcription initiation factor TFIID subunit 5-like	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        103770985 TAF7L; transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        103777757 TAF10; transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        103782257 TAF12; transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        103768968 ATXN7; ataxin-7	K11318 ATXN7; ataxin-7 
E        103776610 ATXN7L1; ataxin-7-like protein 1 isoform X1	K11318 ATXN7; ataxin-7 
E        103779453 CHD1; chromodomain-helicase-DNA-binding protein 1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        103776533 ENY2; transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        103778820 ubiquitin carboxyl-terminal hydrolase 22-A	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        103782102 SF3B3; splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        103778618 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        103771396 SWI/SNF complex subunit SMARCC1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        103774744 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        103771991 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        103772001 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        103774455 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        103780525 actin, cytoplasmic type 5-like	K05692 ACTB_G1; actin beta/gamma 1 
E        103775609 actin, cytoplasmic 1 isoform X1	K05692 ACTB_G1; actin beta/gamma 1 
E        103775277 ACTL6A; actin-like protein 6A	K11340 ACTL6A; actin-like protein 6A 
E        103778116 ARID1B; AT-rich interactive domain-containing protein 1B	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        103778318 ARID2; LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 2	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        103774133 PBRM1; protein polybromo-1 isoform X1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        103778618 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        103773910 SUB1; activated RNA polymerase II transcriptional coactivator p15	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        103777529 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        103773677 CCAR1; cell division cycle and apoptosis regulator protein 1 isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        103774949 TCEA2; transcription elongation factor A protein 2	K03145 TFIIS; transcription elongation factor S-II 
E        103776741 TCEA1; transcription elongation factor A protein 1	K03145 TFIIS; transcription elongation factor S-II 
E        103774343 SUPT6H; LOW QUALITY PROTEIN: transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        103774524 PCF11; pre-mRNA cleavage complex 2 protein Pcf11	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        103776421 CPSF3; cleavage and polyadenylation specificity factor subunit 3	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        103771026 CPSF4; cleavage and polyadenylation specificity factor subunit 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        103771834 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103778907 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        103771518 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        103779159 XRN2; 5'-3' exoribonuclease 2	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        103770329 RPRD1B; regulation of nuclear pre-mRNA domain-containing protein 1B	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        103771821 RPRD1A; regulation of nuclear pre-mRNA domain-containing protein 1A	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        103772624 SFPQ; splicing factor, proline- and glutamine-rich	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        103777476 SCAF8; LOW QUALITY PROTEIN: protein SCAF8	K13191 RBM16; RNA-binding protein 16 
E        103777410 SCAF4; splicing factor, arginine/serine-rich 15	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        103771406 SETX; LOW QUALITY PROTEIN: probable helicase senataxin	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
D      PAF1 complex
E        103769736 CDC73; parafibromin	K15175 CDC73; parafibromin 
E        103770303 CTR9; RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        103770039 LEO1; RNA polymerase-associated protein LEO1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        103782542 LOW QUALITY PROTEIN: RNA polymerase-associated protein RTF1 homolog	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        103781368 NELFA; negative elongation factor A	K15179 WHSC2; negative elongation factor A 
E        103773768 NELFB; negative elongation factor B	K15180 COBRA1; negative elongation factor B 
E        103781983 NELFCD; negative elongation factor C/D	K15181 TH1L; negative elongation factor C/D 
D      Super elongation complex (SEC)
E        103776316 ELL; RNA polymerase II elongation factor ELL	K15183 ELL; RNA polymerase II elongation factor ELL 
E        103780012 AFF1; AF4/FMR2 family member 1	K15184 AFF1; AF4/FMR2 family member 1 
E        103769028 AFF4; AF4/FMR2 family member 4	K15185 AFF4; AF4/FMR2 family member 4 
E        103781102 EAF1; ELL-associated factor 1	K15186 EAF; ELL-associated factor 
E        103771181 ELL-associated factor 1-like	K15186 EAF; ELL-associated factor 
E        103778889 MLLT1; protein ENL	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        103774955 CCNT2; cyclin-T2	K15188 CCNT; cyclin T 
E        103773500 CDK9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        103776316 ELL; RNA polymerase II elongation factor ELL	K15183 ELL; RNA polymerase II elongation factor ELL 
E        103780456 ICE1; uncharacterized protein KIAA0947 homolog	K26143 ICE1; little elongation complex subunit 1 
E        103772997 ICE2; NMDA receptor-regulated protein 2	K26144 ICE2; little elongation complex subunit 2 
D      Brd4/P-TEFb complex
E        103774955 CCNT2; cyclin-T2	K15188 CCNT; cyclin T 
E        103773500 CDK9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        103774158 LARP7; la-related protein 7	K15191 LARP7; La-related protein 7 
E        103774955 CCNT2; cyclin-T2	K15188 CCNT; cyclin T 
E        103773500 CDK9; cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
E        103775204 ZNF326; DBIRD complex subunit ZNF326	K13204 ZNF326; zinc finger protein 326 
D      Others
E        103782578 general transcription factor II-I-like	K03121 TFII-I; transcription initiation factor TFII-I 
E        103775610 general transcription factor II-I repeat domain-containing protein 1-like	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        103774365 BTAF1; TATA-binding protein-associated factor 172	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        103779443 DR1; LOW QUALITY PROTEIN: protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        103773513 AFF2; AF4/FMR2 family member 2	K15194 AFF2; AF4/FMR2 family member 2 
E        103779590 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        103768304 CTDSP1; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103768279 CTDSPL; CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        103775897 IWS1; LOW QUALITY PROTEIN: protein IWS1 homolog	K17498 SPN1; transcription factor SPN1 
E        103774830 CSRNP3; cysteine/serine-rich nuclear protein 3	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        103769171 cysteine/serine-rich nuclear protein 3-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        103774218 RPAP1; RNA polymerase II-associated protein 1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        103775427 RPAP2; putative RNA polymerase II subunit B1 CTD phosphatase RPAP2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        103778232 RPAP3; RNA polymerase II-associated protein 3	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        103771435 CCNK; LOW QUALITY PROTEIN: cyclin-K	K23326 CCNK; cyclin K 
E        103779547 GPN3; GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        103776459 GPN2; GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        103777935 GPN1; GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        103775341 POLR3A; DNA-directed RNA polymerase III subunit RPC1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        103768799 POLR3B; DNA-directed RNA polymerase III subunit RPC2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        103780474 POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
D      Pol III specific subunits
E        103778656 POLR3E; DNA-directed RNA polymerase III subunit RPC5 isoform X1	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        103777637 POLR3F; DNA-directed RNA polymerase III subunit RPC6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        103772070 POLR3H; DNA-directed RNA polymerase III subunit RPC8 isoform X1	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        103781877 CRCP; DNA-directed RNA polymerase III subunit RPC9	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
D      Pol I, II, III common subunits
E        103776615 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103778176 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103770387 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
C    Basal transcription factors
D      TFIIIA
E        103769607 GTF3A; transcription factor IIIA	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        103776806 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103771644 TBP; TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103772286 TBPL1; TATA box-binding protein-like protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103775602 transcription factor IIIB 90 kDa subunit-like	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
D      TFIIIC
E        103769570 GTF3C1; general transcription factor 3C polypeptide 1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        103778530 GTF3C3; LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        103772241 GTF3C4; general transcription factor 3C polypeptide 4	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        103777273 GTF3C6; general transcription factor 3C polypeptide 6	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        103778530 GTF3C3; LOW QUALITY PROTEIN: general transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        103773263 SNAPC1; snRNA-activating protein complex subunit 1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        103779205 SNAPC3; snRNA-activating protein complex subunit 3	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        103774528 SNAPC4; snRNA-activating protein complex subunit 4	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
E        103778611 SNAPC5; snRNA-activating protein complex subunit 5	K15211 SNAPC5; snRNA-activating protein complex subunit 5 
D      Octamer transcription factors
E        103781229 POU2F1; POU domain, class 2, transcription factor 1 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        103771395 POU2F3; POU domain, class 2, transcription factor 3	K09364 POU2F; POU domain transcription factor, class 2 
D      Others
E        103773418 zinc finger protein 76-like	K20828 ZNF143_76; zinc finger protein 143/76 
E        103777464 ZNF143; zinc finger protein 143 isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        103769332 POLR1A; LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        103771763 POLR1B; DNA-directed RNA polymerase I subunit RPA2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        103780474 POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
D      Pol I specific subunits
E        103770152 POLR1E; DNA-directed RNA polymerase I subunit RPA49	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        103772637 TWISTNB; DNA-directed RNA polymerase I subunit RPA43	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
D      Pol I, II, III common subunits
E        103776615 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        103778176 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        103770387 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
C    Basal transcription factors
D      SL1/TIF-1B
E        103776806 TATA-box-binding protein-like	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103771644 TBP; TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103772286 TBPL1; TATA box-binding protein-like protein 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        103780939 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A	K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A 
E        103768220 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
E        103774898 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D	K15215 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
E        103782347 RRN3; RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
D      NoRC (nucleolar remodeling complex)
D      CTDK-I complex
D      Transcription termination factors
E        103774821 TTF1; transcription termination factor 1	K15225 TTF1; transcription termination factor 1 
E        103781407 polymerase I and transcript release factor-like	K19387 PTRF; polymerase I and transcript release factor 
D      Others
E        103774162 nucleolar and coiled-body phosphoprotein 1-like	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        103771755 GTF2B; transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        103773394 general transcription factor IIE subunit 1-like	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        103775043 GTF2E1; general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#Last updated: April 9, 2024