+D GENES KO
#
KEGG Orthology (KO) - Microbacterium neungamense
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:mnf00010]
D JSY13_11675 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSY13_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_09110 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_11265 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D JSY13_04695 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JSY13_03315 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSY13_03310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSY13_07605 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JSY13_07615 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSY13_07610 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JSY13_09685 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSY13_03150 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSY13_06595 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JSY13_06010 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JSY13_06100 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_12300 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D JSY13_09850 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSY13_01020 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JSY13_10995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSY13_06045 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D JSY13_02920 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:mnf00020]
D JSY13_03590 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JSY13_06205 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JSY13_02590 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JSY13_04200 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_02520 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JSY13_02515 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JSY13_08765 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JSY13_08770 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JSY13_08755 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JSY13_08760 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JSY13_03265 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JSY13_01245 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSY13_09945 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D JSY13_07955 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JSY13_02920 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JSY13_06010 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JSY13_06100 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:mnf00030]
D JSY13_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_09110 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_11265 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D JSY13_07100 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSY13_10080 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSY13_07110 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D JSY13_00410 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JSY13_08835 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JSY13_06530 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JSY13_07085 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JSY13_07090 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JSY13_11375 hypothetical protein K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JSY13_05910 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JSY13_07545 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D JSY13_11380 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D JSY13_10995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSY13_08870 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JSY13_11425 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JSY13_08885 gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D JSY13_03310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSY13_03315 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSY13_04695 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:mnf00040]
D JSY13_02130 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JSY13_09425 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSY13_06530 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JSY13_01480 FGGY-family carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D JSY13_11270 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D JSY13_11775 sugar kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:mnf00051]
D JSY13_01990 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JSY13_03975 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JSY13_08700 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSY13_08745 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JSY13_11320 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
D JSY13_11325 L-fuconate dehydratase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D JSY13_04695 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JSY13_03315 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSY13_01475 mannitol dehydrogenase family protein K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67]
D JSY13_03310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSY13_07605 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JSY13_05910 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JSY13_02905 HAD-IA family hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
C 00052 Galactose metabolism [PATH:mnf00052]
D JSY13_01020 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D JSY13_11025 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JSY13_11020 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JSY13_09385 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSY13_11030 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSY13_09425 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSY13_10995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSY13_11675 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSY13_03935 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D JSY13_04695 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JSY13_00805 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JSY13_10510 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:mnf00053]
D JSY13_02130 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JSY13_11320 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122]
C 00500 Starch and sucrose metabolism [PATH:mnf00500]
D JSY13_00805 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JSY13_10510 glycoside hydrolase family 13 protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D JSY13_09425 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSY13_00845 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JSY13_05730 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JSY13_00985 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D JSY13_05740 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D JSY13_12215 phosphotransferase K16146 pep2; maltokinase [EC:2.7.1.175]
D JSY13_05735 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D JSY13_06965 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D JSY13_05175 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D JSY13_05180 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D JSY13_09975 glycoside hydrolase family 65 protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D JSY13_10995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSY13_11675 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSY13_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_09110 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_11265 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D JSY13_01990 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mnf00520]
D JSY13_07325 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JSY13_02625 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D JSY13_01990 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D JSY13_02290 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JSY13_02100 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D JSY13_08875 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JSY13_05430 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JSY13_10265 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JSY13_12270 N-acetylneuraminate synthase family protein K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D JSY13_11675 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSY13_06045 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D JSY13_10995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSY13_09425 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSY13_02130 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JSY13_11025 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JSY13_11020 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D JSY13_09385 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSY13_11030 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSY13_03935 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D JSY13_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_09110 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_11265 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D JSY13_03975 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JSY13_08700 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSY13_08745 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:mnf00620]
D JSY13_09850 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSY13_06010 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JSY13_06100 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_09985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JSY13_09990 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSY13_06595 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JSY13_00880 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_08685 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_12300 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D JSY13_09885 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D JSY13_07955 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JSY13_01245 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSY13_09945 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D JSY13_03265 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JSY13_03065 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JSY13_02920 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D JSY13_10225 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_07180 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mnf00630]
D JSY13_10220 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D JSY13_09850 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSY13_10225 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D JSY13_01245 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSY13_03590 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D JSY13_06205 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_00880 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_08685 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_08650 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JSY13_02615 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D JSY13_00240 HAD hydrolase-like protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D JSY13_06055 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06070 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_10950 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_02640 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JSY13_03460 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JSY13_03450 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_03455 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JSY13_11425 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D JSY13_04200 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JSY13_10705 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:mnf00640]
D JSY13_09850 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSY13_09985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JSY13_09990 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSY13_02895 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_06935 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_12140 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_02890 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_06930 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_12135 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_02885 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_06925 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_12130 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_01115 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_00880 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_08685 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_10200 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSY13_08650 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JSY13_02515 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JSY13_02520 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JSY13_11200 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSY13_11240 MmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D JSY13_11235 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:mnf00650]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_02865 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_11820 hypothetical protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D JSY13_08765 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JSY13_08770 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JSY13_08755 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JSY13_08760 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JSY13_10200 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSY13_10175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSY13_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSY13_05130 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JSY13_05135 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JSY13_01355 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D JSY13_05190 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSY13_05195 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:mnf00660]
D JSY13_05190 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSY13_05195 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JSY13_02515 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JSY13_02520 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JSY13_05420 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JSY13_05425 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JSY13_05245 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:mnf00562]
D JSY13_02035 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JSY13_11200 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSY13_07605 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:mnf00190]
D JSY13_03170 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D JSY13_08765 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JSY13_08770 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JSY13_08755 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JSY13_08760 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JSY13_07735 Rieske 2Fe-2S domain-containing protein K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D JSY13_07740 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D JSY13_07730 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D JSY13_07080 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JSY13_07750 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D JSY13_07725 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D JSY13_07755 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D JSY13_07760 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D JSY13_07075 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JSY13_10895 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JSY13_10890 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JSY13_04495 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JSY13_04505 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JSY13_04500 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JSY13_04490 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JSY13_04510 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JSY13_04475 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JSY13_04485 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JSY13_04480 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JSY13_01340 ppa; inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D JSY13_09715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:mnf00710]
D JSY13_07610 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JSY13_07615 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSY13_03310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSY13_03315 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSY13_07085 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D JSY13_05910 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D JSY13_07605 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JSY13_06530 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D JSY13_07090 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JSY13_11375 hypothetical protein K00616 TALDO1; transaldolase [EC:2.2.1.2]
D JSY13_03065 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JSY13_01245 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:mnf00720]
D JSY13_03065 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JSY13_07955 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D JSY13_01245 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSY13_03265 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D JSY13_08765 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D JSY13_08770 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D JSY13_08755 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D JSY13_08760 succinate dehydrogenase hydrophobic membrane anchor subunit K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D JSY13_02520 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D JSY13_02515 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_02590 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JSY13_06205 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D JSY13_02645 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JSY13_08495 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D JSY13_09990 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSY13_09985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JSY13_09850 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:mnf00680]
D JSY13_02640 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JSY13_03150 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSY13_03065 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D JSY13_01245 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSY13_03310 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D JSY13_03315 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D JSY13_04695 ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D JSY13_09985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D JSY13_09990 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSY13_09850 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSY13_09685 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSY13_05230 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSY13_11275 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSY13_09505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JSY13_06975 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JSY13_01925 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:mnf00910]
D JSY13_03060 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JSY13_06055 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06070 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_10950 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06585 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JSY13_06590 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JSY13_04120 hypothetical protein K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JSY13_03270 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:mnf00920]
D JSY13_11870 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JSY13_11880 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D JSY13_11875 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JSY13_04815 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D JSY13_11865 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JSY13_11860 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JSY13_11855 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D JSY13_11850 nitrite/sulfite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D JSY13_06250 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSY13_09095 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSY13_04445 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JSY13_04450 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JSY13_11395 pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JSY13_04245 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D JSY13_10045 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:mnf00061]
D JSY13_00880 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_08685 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_05990 acyl carrier protein K02078 acpP; acyl carrier protein
D JSY13_06000 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JSY13_05995 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JSY13_05985 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JSY13_06985 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JSY13_05765 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_07940 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:mnf00071]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_06225 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_11210 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_01115 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSY13_01040 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JSY13_02505 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSY13_05765 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_07940 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_01625 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:mnf00561]
D JSY13_02840 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D JSY13_02845 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D JSY13_05560 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JSY13_08305 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D JSY13_04555 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JSY13_07935 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:mnf00564]
D JSY13_05440 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D JSY13_05570 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D JSY13_04555 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JSY13_07935 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JSY13_02445 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JSY13_06765 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D JSY13_05690 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D JSY13_00450 CDP-alcohol phosphatidyltransferase family protein K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JSY13_04930 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D JSY13_01440 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:mnf00592]
D JSY13_01115 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSY13_06225 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_11210 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:mnf01040]
D JSY13_01115 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSY13_05880 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:mnf00230]
D JSY13_04910 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D JSY13_10995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSY13_08870 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D JSY13_00950 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JSY13_00920 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D JSY13_02540 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JSY13_00445 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D JSY13_00820 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D JSY13_00815 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JSY13_00945 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D JSY13_03820 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D JSY13_03825 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D JSY13_12170 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JSY13_02545 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JSY13_00840 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JSY13_04785 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JSY13_11660 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D JSY13_08695 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JSY13_00545 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D JSY13_02375 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JSY13_02395 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JSY13_07440 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JSY13_08600 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D JSY13_02415 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JSY13_10695 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JSY13_04205 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7]
D JSY13_06500 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D JSY13_09140 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JSY13_09135 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JSY13_07140 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D JSY13_09285 dgt; dNTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D JSY13_06365 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JSY13_02275 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D JSY13_00720 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D JSY13_00385 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JSY13_08710 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D JSY13_10340 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JSY13_00510 metallophosphoesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D JSY13_04720 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D JSY13_06305 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D JSY13_11865 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JSY13_11860 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JSY13_02930 uraD; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D JSY13_04730 fumarylacetoacetate hydrolase family protein K16856 ugl; ureidoglycolate lyase [EC:4.3.2.3]
D JSY13_04120 hypothetical protein K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:mnf00240]
D JSY13_06490 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JSY13_06485 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JSY13_06470 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JSY13_06475 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D JSY13_07780 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D JSY13_11680 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D JSY13_06495 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D JSY13_05680 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D JSY13_07440 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JSY13_08680 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D JSY13_08270 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D JSY13_08230 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D JSY13_04785 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JSY13_11660 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D JSY13_00545 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3]
D JSY13_01730 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D JSY13_06465 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JSY13_08720 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D JSY13_04270 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D JSY13_11925 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D JSY13_09140 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JSY13_09135 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D JSY13_09815 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D JSY13_06190 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JSY13_08715 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D JSY13_09895 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D JSY13_04895 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JSY13_11825 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:mnf00250]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSY13_03435 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JSY13_04130 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JSY13_04540 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JSY13_04725 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D JSY13_00320 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JSY13_08360 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JSY13_00385 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D JSY13_12170 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D JSY13_06470 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D JSY13_10200 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSY13_10175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSY13_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSY13_06585 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JSY13_06590 glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D JSY13_03060 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JSY13_11055 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSY13_11125 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSY13_06055 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06070 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_10950 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06490 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JSY13_06485 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JSY13_00815 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JSY13_02290 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JSY13_00950 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:mnf00260]
D JSY13_09955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JSY13_04420 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JSY13_04425 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D JSY13_01610 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JSY13_10630 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D JSY13_02640 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JSY13_09685 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSY13_05230 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSY13_11275 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSY13_09505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JSY13_06975 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D JSY13_03460 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JSY13_03450 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_03455 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D JSY13_10050 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D JSY13_01535 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JSY13_03205 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JSY13_06575 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JSY13_06570 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:mnf00270]
D JSY13_04445 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JSY13_04450 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JSY13_11395 pyridoxal-phosphate dependent enzyme K01738 cysK; cysteine synthase [EC:2.5.1.47]
D JSY13_07045 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JSY13_10050 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D JSY13_08490 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JSY13_06510 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JSY13_01710 nucleoside phosphorylase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D JSY13_03225 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D JSY13_09955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JSY13_04420 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JSY13_04245 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D JSY13_10045 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JSY13_04250 bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D JSY13_09060 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D JSY13_05250 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSY13_06250 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSY13_09095 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSY13_01245 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D JSY13_01535 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D JSY13_05230 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSY13_11275 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSY13_09505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:mnf00280]
D JSY13_05250 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSY13_08220 Glu/Leu/Phe/Val dehydrogenase family protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D JSY13_02895 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_06935 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_12140 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_02890 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_06930 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_12135 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_02885 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_06925 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_12130 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_01040 acyl-CoA dehydrogenase family protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D JSY13_06905 acyl-CoA dehydrogenase family protein K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_06225 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_11210 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_00880 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_08685 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D JSY13_08650 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D JSY13_11190 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D JSY13_11200 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D JSY13_10200 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSY13_06910 ATP-grasp domain-containing protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D JSY13_06915 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D JSY13_05130 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D JSY13_05135 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:mnf00290]
D JSY13_03205 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D JSY13_05420 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D JSY13_05425 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D JSY13_05245 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D JSY13_05190 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSY13_05195 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JSY13_05200 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JSY13_05185 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JSY13_05250 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSY13_08220 Glu/Leu/Phe/Val dehydrogenase family protein K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D JSY13_04130 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JSY13_07180 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:mnf00300]
D JSY13_04420 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D JSY13_09955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JSY13_04915 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JSY13_11785 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JSY13_04870 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D JSY13_03600 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D JSY13_08370 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JSY13_03775 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D JSY13_03605 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JSY13_04975 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JSY13_01055 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JSY13_04415 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JSY13_04570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JSY13_07880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:mnf00310]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_02505 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_10200 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSY13_10175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSY13_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:mnf00220]
D JSY13_08365 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D JSY13_00320 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JSY13_08360 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JSY13_04340 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D JSY13_00815 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JSY13_06055 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06070 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_10950 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06490 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D JSY13_06485 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D JSY13_04120 hypothetical protein K00926 arcC; carbamate kinase [EC:2.7.2.2]
D JSY13_03060 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSY13_04130 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JSY13_10915 amino-acid N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D JSY13_08380 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D JSY13_08375 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D JSY13_08370 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:mnf00330]
D JSY13_04270 nucleoside deaminase K03365 FCY1; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D JSY13_10925 PLP-dependent transferase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D JSY13_09255 agmatine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D JSY13_10195 FAD-dependent oxidoreductase K03343 puo; putrescine oxidase [EC:1.4.3.10]
D JSY13_02585 GNAT family N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D JSY13_09260 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSY13_09160 aldehyde dehydrogenase family protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D JSY13_04340 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
D JSY13_11110 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D JSY13_01745 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D JSY13_11055 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSY13_11125 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSY13_07405 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JSY13_07400 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D JSY13_01255 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:mnf00340]
D JSY13_06540 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D JSY13_06535 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D JSY13_06550 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D JSY13_08460 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D JSY13_08465 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D JSY13_06545 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D JSY13_08470 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D JSY13_08475 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_12145 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_05015 histidinol phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D JSY13_07790 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D JSY13_09220 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D JSY13_09215 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D JSY13_09210 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D JSY13_09200 arginase family protein K01479 hutG; formiminoglutamase [EC:3.5.3.8]
C 00350 Tyrosine metabolism [PATH:mnf00350]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSY13_08475 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_12145 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_02675 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D JSY13_02685 fumarylacetoacetate hydrolase family protein K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D JSY13_02665 fumarylacetoacetate hydrolase family protein K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D JSY13_02660 HpcH/HpaI aldolase/citrate lyase family protein K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D JSY13_10175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSY13_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:mnf00360]
D JSY13_02830 paaI; hydroxyphenylacetyl-CoA thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D JSY13_02825 paaA; 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D JSY13_02820 paaB; 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D JSY13_02815 paaC; phenylacetate-CoA oxygenase subunit PaaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D JSY13_02810 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D JSY13_02805 paaK; phenylacetate-CoA oxygenase/reductase subunit PaaK K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D JSY13_02025 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D JSY13_02860 paaZ; phenylacetic acid degradation bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_02865 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSY13_08475 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_12145 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_04040 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D JSY13_09260 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSY13_07060 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D JSY13_01625 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:mnf00380]
D JSY13_10810 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D JSY13_10820 aminotransferase class V-fold PLP-dependent enzyme K01556 KYNU; kynureninase [EC:3.7.1.3]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_02505 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_09260 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSY13_04040 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:mnf00400]
D JSY13_07930 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JSY13_06435 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D JSY13_06440 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D JSY13_06430 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D JSY13_04185 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D JSY13_06425 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D JSY13_07700 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D JSY13_08460 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D JSY13_06565 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D JSY13_06575 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D JSY13_06570 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D JSY13_00395 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D JSY13_08235 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JSY13_10990 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSY13_08475 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_12145 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:mnf00410]
D JSY13_00070 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D JSY13_10200 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSY13_02465 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D JSY13_00065 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JSY13_11825 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_01115 acyl-CoA dehydrogenase family protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D JSY13_11200 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:mnf00430]
D JSY13_04540 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D JSY13_02465 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D JSY13_09990 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D JSY13_09985 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:mnf00450]
D JSY13_10045 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D JSY13_07045 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JSY13_08490 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D JSY13_04370 SufS family cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D JSY13_12335 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D JSY13_11865 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JSY13_11860 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JSY13_09000 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:mnf00460]
D JSY13_00845 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D JSY13_02640 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:mnf00470]
D JSY13_02300 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JSY13_06150 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JSY13_05445 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JSY13_00815 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D JSY13_08610 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JSY13_07870 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JSY13_04975 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D JSY13_01055 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D JSY13_04415 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:mnf00480]
D JSY13_00865 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D JSY13_00200 YbdK family carboxylate-amine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D JSY13_05580 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D JSY13_06110 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JSY13_05900 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JSY13_02590 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D JSY13_00410 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JSY13_08835 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D JSY13_07100 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSY13_10080 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSY13_07150 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:mnf00515]
D JSY13_09010 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:mnf00514]
D JSY13_09010 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:mnf00511]
D JSY13_11590 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:mnf00542]
D JSY13_04465 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:mnf00541]
D JSY13_09425 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D JSY13_09385 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSY13_11030 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D JSY13_03935 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D JSY13_02130 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D JSY13_03910 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JSY13_03915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JSY13_03920 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D JSY13_03975 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D JSY13_08700 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D JSY13_08745 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D JSY13_08875 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D JSY13_12270 N-acetylneuraminate synthase family protein K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
C 00550 Peptidoglycan biosynthesis [PATH:mnf00550]
D JSY13_05430 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JSY13_10265 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JSY13_07855 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JSY13_07870 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JSY13_04570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JSY13_05445 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JSY13_07880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JSY13_07165 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JSY13_06825 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JSY13_07875 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JSY13_07860 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JSY13_07885 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JSY13_00170 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D JSY13_01035 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:mnf00552]
D JSY13_06825 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JSY13_04465 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JSY13_03790 CDP-glycerol glycerophosphotransferase family protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D JSY13_02420 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:mnf00543]
D JSY13_04465 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JSY13_04445 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D JSY13_03795 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D JSY13_02145 polysaccharide pyruvyl transferase family protein K16563 exoV; succinoglycan biosynthesis protein ExoV
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:mnf00730]
D JSY13_08390 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]
D JSY13_03425 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_05745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_06210 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JSY13_05460 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D JSY13_04180 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JSY13_10340 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:mnf00740]
D JSY13_03020 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JSY13_03030 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JSY13_03015 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D JSY13_03025 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D JSY13_04680 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D JSY13_04815 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D JSY13_04910 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:mnf00750]
D JSY13_09505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D JSY13_01610 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D JSY13_06320 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D JSY13_06325 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:mnf00760]
D JSY13_03435 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D JSY13_03440 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D JSY13_03430 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D JSY13_08620 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D JSY13_08695 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D JSY13_04785 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D JSY13_11660 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D JSY13_07390 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D JSY13_03730 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D JSY13_01715 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D JSY13_00855 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D JSY13_04935 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D JSY13_09795 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D JSY13_08290 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D JSY13_11155 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D JSY13_11150 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D JSY13_11820 hypothetical protein K01799 nicE; maleate isomerase [EC:5.2.1.1]
D JSY13_10175 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D JSY13_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:mnf00770]
D JSY13_05190 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D JSY13_05195 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D JSY13_05200 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D JSY13_05185 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D JSY13_00075 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D JSY13_00065 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D JSY13_02285 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D JSY13_11735 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D JSY13_05475 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D JSY13_07670 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D JSY13_02295 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D JSY13_05250 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSY13_11825 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JSY13_00070 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:mnf00780]
D JSY13_05985 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JSY13_06985 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JSY13_03810 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:mnf00785]
D JSY13_05545 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D JSY13_05540 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D JSY13_11075 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_06010 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D JSY13_06100 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D JSY13_04200 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D JSY13_02895 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_06935 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_12140 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D JSY13_02890 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_06930 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_12135 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D JSY13_02885 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_06925 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_12130 2-oxo acid dehydrogenase subunit E2 K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D JSY13_03460 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D JSY13_03450 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JSY13_03455 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:mnf00790]
D JSY13_01380 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D JSY13_01620 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D JSY13_01390 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D JSY13_01395 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D JSY13_01385 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JSY13_01630 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D JSY13_04900 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JSY13_07450 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D JSY13_03020 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D JSY13_00155 aminodeoxychorismate/anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D JSY13_07305 pabB; aminodeoxychorismate synthase component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D JSY13_09745 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D JSY13_09270 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
C 00670 One carbon pool by folate [PATH:mnf00670]
D JSY13_04900 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D JSY13_02645 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D JSY13_02640 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D JSY13_02540 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D JSY13_02545 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JSY13_06520 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JSY13_03450 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D JSY13_04895 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D JSY13_10705 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D JSY13_08495 methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D JSY13_09430 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:mnf00860]
D JSY13_05270 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSY13_11560 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D JSY13_11510 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JSY13_11515 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JSY13_11525 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D JSY13_11520 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D JSY13_11555 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D JSY13_11550 FAD-dependent oxidoreductase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D JSY13_05905 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D JSY13_11885 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D JSY13_07080 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JSY13_07075 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mnf00130]
D JSY13_10565 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D JSY13_10555 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D JSY13_10580 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D JSY13_01875 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D JSY13_01895 AMP-binding protein K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D JSY13_01890 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D JSY13_10605 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:mnf00900]
D JSY13_06210 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D JSY13_04565 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D JSY13_09640 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D JSY13_08975 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D JSY13_04585 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D JSY13_03290 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_07910 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JSY13_03235 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D JSY13_07165 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:mnf00907]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_11440 NAD(P)-dependent oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase
D JSY13_06225 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_11210 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D JSY13_07085 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:mnf00523]
D JSY13_03910 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JSY13_03915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JSY13_03920 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D JSY13_03870 NAD-dependent epimerase/dehydratase family protein K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D JSY13_10555 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D JSY13_03915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:mnf00946]
D JSY13_00845 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:mnf00311]
D JSY13_10850 peptidase C45 K19200 IAL; isopenicillin-N N-acyltransferase like protein
D JSY13_00300 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D JSY13_11615 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:mnf00332]
D JSY13_07405 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D JSY13_07400 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:mnf00261]
D JSY13_11865 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D JSY13_11860 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D JSY13_09955 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D JSY13_04915 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JSY13_11785 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D JSY13_04870 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:mnf00521]
D JSY13_11675 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D JSY13_10995 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D JSY13_02035 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D JSY13_03910 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JSY13_03915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D JSY13_03920 bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase family protein/NAD(P)-dependent oxidoreductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D JSY13_11675 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:mnf00525]
D JSY13_03910 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D JSY13_03915 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:mnf00401]
D JSY13_08235 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSY13_08475 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_12145 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D JSY13_04580 chorismate-binding protein K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
C 00333 Prodigiosin biosynthesis
D JSY13_06000 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JSY13_06985 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D JSY13_05990 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:mnf00999]
D JSY13_06510 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D JSY13_00845 family 1 glycosylhydrolase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:mnf00362]
D JSY13_06225 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_11210 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_01625 FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D JSY13_02505 acyl-CoA dehydrogenase family protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_02865 3-hydroxyacyl-CoA dehydrogenase family protein K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:mnf00627]
D JSY13_09260 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D JSY13_02700 FAD-dependent monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D JSY13_01490 alpha/beta fold hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D JSY13_01490 alpha/beta fold hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation
D JSY13_02700 FAD-dependent monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D JSY13_06225 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D JSY13_11210 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:mnf00643]
D JSY13_09260 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:mnf00930]
D JSY13_11185 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D JSY13_10210 serine hydrolase K01453 nylB; 6-aminohexanoate-oligomer exohydrolase [EC:3.5.1.46]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:mnf03020]
D JSY13_01975 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JSY13_01980 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JSY13_10300 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JSY13_06505 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D JSY13_09530 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:mnf03010]
D JSY13_07675 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JSY13_05670 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JSY13_10410 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JSY13_06395 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JSY13_10360 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JSY13_12260 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JSY13_10470 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JSY13_10375 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JSY13_02095 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JSY13_10445 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JSY13_10305 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JSY13_10475 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JSY13_10310 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JSY13_12040 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JSY13_04780 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JSY13_05585 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JSY13_10395 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JSY13_12250 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JSY13_10420 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JSY13_07270 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JSY13_10135 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JSY13_10425 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JSY13_10440 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JSY13_10435 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JSY13_10380 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JSY13_10370 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JSY13_10070 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JSY13_12245 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JSY13_10075 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JSY13_10140 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JSY13_02090 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JSY13_10390 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JSY13_10350 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JSY13_10405 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JSY13_10295 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JSY13_10365 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JSY13_05625 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JSY13_08435 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JSY13_07420 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JSY13_10415 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JSY13_10430 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JSY13_10385 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JSY13_08805 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D JSY13_07415 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JSY13_12050 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JSY13_10400 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JSY13_10355 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JSY13_06955 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JSY13_05485 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JSY13_12045 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JSY13_12415 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JSY13_08440 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JSY13_08925 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JSY13_10315 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JSY13_08325 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:mnf00970]
D JSY13_05270 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSY13_05780 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JSY13_05785 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JSY13_05775 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JSY13_06405 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JSY13_01825 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JSY13_11600 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JSY13_06300 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JSY13_01455 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JSY13_09635 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JSY13_09000 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JSY13_06520 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D JSY13_07485 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JSY13_07300 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JSY13_07455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JSY13_01425 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JSY13_04400 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JSY13_04605 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JSY13_03120 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JSY13_08405 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JSY13_08400 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JSY13_08345 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JSY13_08790 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:mnf03060]
D JSY13_10345 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JSY13_10165 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JSY13_07600 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JSY13_06355 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JSY13_06360 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JSY13_06350 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JSY13_12400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JSY13_04110 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JSY13_05555 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JSY13_05530 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JSY13_06790 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D JSY13_03625 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D JSY13_06785 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D JSY13_05630 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JSY13_07820 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JSY13_11355 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:mnf04122]
D JSY13_03425 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_05745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_06250 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSY13_09095 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D JSY13_05750 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JSY13_09270 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
C 03050 Proteasome
C 03018 RNA degradation [PATH:mnf03018]
D JSY13_07430 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D JSY13_03150 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSY13_04855 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JSY13_05760 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JSY13_01095 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSY13_04430 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JSY13_04920 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JSY13_11815 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSY13_09560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSY13_09715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JSY13_12310 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:mnf03030]
D JSY13_03325 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_06950 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_07800 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSY13_09970 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSY13_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSY13_07275 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSY13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSY13_12235 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JSY13_07135 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JSY13_05855 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_00580 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JSY13_05635 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JSY13_06615 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSY13_05755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:mnf03410]
D JSY13_04260 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JSY13_04660 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JSY13_12080 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JSY13_03035 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JSY13_05495 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JSY13_05915 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JSY13_10670 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JSY13_02555 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JSY13_01120 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JSY13_07330 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JSY13_08775 endonuclease/exonuclease/phosphatase family protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JSY13_11690 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JSY13_06615 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSY13_05755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:mnf03420]
D JSY13_03050 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JSY13_07640 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JSY13_07655 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JSY13_07635 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JSY13_02455 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_03720 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_03735 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_06615 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSY13_05755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JSY13_09530 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:mnf03430]
D JSY13_02455 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_03720 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_03735 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_03285 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JSY13_03280 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JSY13_05855 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_07800 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSY13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSY13_09970 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSY13_07275 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSY13_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSY13_03325 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_06950 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_05755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JSY13_05050 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:mnf03440]
D JSY13_05855 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JSY13_07170 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JSY13_09965 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JSY13_04950 recA; recombinase RecA K03553 recA; recombination protein RecA
D JSY13_06615 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSY13_06340 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JSY13_06345 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JSY13_06335 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JSY13_05470 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JSY13_07800 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSY13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSY13_09970 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSY13_07275 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSY13_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSY13_03325 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_06950 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_06515 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:mnf03450]
D JSY13_08585 Ku protein K10979 ku; DNA end-binding protein Ku
D JSY13_08590 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:mnf03250]
D JSY13_00130 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:mnf02010]
D JSY13_11870 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JSY13_11880 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D JSY13_11875 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JSY13_00530 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JSY13_05150 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JSY13_00520 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JSY13_05155 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JSY13_00525 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JSY13_05160 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JSY13_10525 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D JSY13_10520 ABC transporter permease subunit K10109 malF; maltose/maltodextrin transport system permease protein
D JSY13_09615 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JSY13_10515 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JSY13_12065 carbohydrate ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JSY13_12060 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JSY13_12055 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JSY13_10065 extracellular solute-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D JSY13_10060 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D JSY13_10055 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D JSY13_04390 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein
D JSY13_11575 extracellular solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D JSY13_08955 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D JSY13_08960 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D JSY13_08965 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JSY13_08740 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JSY13_08730 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JSY13_08725 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JSY13_08735 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JSY13_11290 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D JSY13_11295 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D JSY13_11300 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D JSY13_11385 rbsD; D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D JSY13_09725 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JSY13_09730 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JSY13_09735 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JSY13_09740 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JSY13_08420 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D JSY13_08415 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D JSY13_08410 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D JSY13_08425 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D JSY13_10130 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JSY13_10125 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D JSY13_10120 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JSY13_02350 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JSY13_02370 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JSY13_02365 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JSY13_02360 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JSY13_02355 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JSY13_08915 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JSY13_08905 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JSY13_08910 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JSY13_03465 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JSY13_03470 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JSY13_03475 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JSY13_03480 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSY13_02550 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSY13_07240 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D JSY13_07255 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D JSY13_07250 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D JSY13_07245 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D JSY13_08945 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D JSY13_11640 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D JSY13_11650 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JSY13_11645 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D JSY13_07030 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JSY13_07020 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D JSY13_07025 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D JSY13_01045 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JSY13_11460 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JSY13_03940 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D JSY13_08510 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JSY13_08515 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JSY13_11485 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JSY13_11480 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS) [PATH:mnf02060]
D JSY13_02850 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
C 03070 Bacterial secretion system [PATH:mnf03070]
D JSY13_06355 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JSY13_06360 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JSY13_10165 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JSY13_07600 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JSY13_10345 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JSY13_06350 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JSY13_12400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JSY13_04110 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JSY13_05530 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JSY13_05555 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JSY13_06790 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D JSY13_03625 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D JSY13_06785 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:mnf02020]
D JSY13_09665 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JSY13_09660 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D JSY13_09725 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JSY13_00785 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JSY13_00780 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JSY13_07075 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JSY13_03780 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D JSY13_04075 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JSY13_04070 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D JSY13_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JSY13_11640 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D JSY13_11645 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D JSY13_11650 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JSY13_01035 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JSY13_06895 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D JSY13_09360 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JSY13_09355 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D JSY13_08565 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSY13_09845 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSY13_08560 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JSY13_08555 type II secretion system F family protein K12511 tadC; tight adherence protein C
D JSY13_06055 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06070 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_10950 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_10895 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D JSY13_10890 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D JSY13_02270 low molecular weight phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D JSY13_12165 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D JSY13_04340 arginase family protein K01476 rocF; arginase [EC:3.5.3.1]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:mnf02024]
D JSY13_03225 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D JSY13_07930 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D JSY13_04580 chorismate-binding protein K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D JSY13_00780 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JSY13_04755 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JSY13_04765 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D JSY13_04760 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D JSY13_04750 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D JSY13_02350 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JSY13_02370 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JSY13_02365 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JSY13_02360 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JSY13_02355 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JSY13_05765 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_07940 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_03030 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D JSY13_09590 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JSY13_03465 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JSY13_03470 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JSY13_03475 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JSY13_03480 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSY13_02550 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSY13_01190 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSY13_01950 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSY13_04310 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSY13_07480 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSY13_01955 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSY13_04305 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSY13_07475 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSY13_01960 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSY13_04300 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSY13_07470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSY13_04295 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JSY13_07465 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JSY13_01965 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JSY13_12400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JSY13_10165 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JSY13_07600 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JSY13_10345 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JSY13_06350 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JSY13_04110 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JSY13_05530 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JSY13_05555 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:mnf02030]
D JSY13_10525 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D JSY13_11290 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:mnf02040]
D JSY13_10130 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JSY13_06120 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D JSY13_03150 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:mnf01501]
D JSY13_07325 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D JSY13_03465 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JSY13_03470 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JSY13_03475 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JSY13_03480 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSY13_02550 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSY13_11615 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JSY13_07885 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:mnf01502]
D JSY13_05445 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JSY13_02300 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JSY13_06150 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JSY13_07880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D JSY13_07875 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JSY13_07860 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JSY13_01035 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D JSY13_00130 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:mnf01000]
C 01001 Protein kinases [BR:mnf01001]
D JSY13_00160 PASTA domain-containing protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JSY13_00165 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JSY13_07925 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D JSY13_02135 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JSY13_02255 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JSY13_09665 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JSY13_00785 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JSY13_04075 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JSY13_08850 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JSY13_09550 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JSY13_09360 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JSY13_04160 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:mnf01009]
D JSY13_00180 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D JSY13_01155 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D JSY13_04530 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D JSY13_06975 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:mnf01002]
D JSY13_07820 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JSY13_11355 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D JSY13_08010 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSY13_02415 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JSY13_10695 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D JSY13_00950 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D JSY13_06585 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D JSY13_02290 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D JSY13_10850 peptidase C45 K19200 IAL; isopenicillin-N N-acyltransferase like protein
D JSY13_09765 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D JSY13_00145 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JSY13_05900 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D JSY13_11620 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D JSY13_01035 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JSY13_06110 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D JSY13_03605 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D JSY13_05615 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JSY13_10335 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D JSY13_03680 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D JSY13_01375 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JSY13_04735 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D JSY13_03780 trypsin-like peptidase domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D JSY13_04705 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D JSY13_07555 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JSY13_07560 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JSY13_12190 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JSY13_12195 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D JSY13_03745 PDZ domain-containing protein K07177 K07177; Lon-like protease
D JSY13_08485 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JSY13_05630 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D JSY13_01255 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D JSY13_00300 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 01003 Glycosyltransferases [BR:mnf01003]
D JSY13_01265 glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D JSY13_09010 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D JSY13_04850 glycosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D JSY13_06965 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D JSY13_02420 glycosyltransferase K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D JSY13_04465 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D JSY13_03795 glycosyltransferase family 2 protein K16557 exoA; succinoglycan biosynthesis protein ExoA [EC:2.4.-.-]
D JSY13_03960 glycosyltransferase family 2 protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D JSY13_05175 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:mnf01005]
D JSY13_04465 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:mnf01011]
D JSY13_05430 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D JSY13_10265 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D JSY13_07855 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D JSY13_07870 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D JSY13_04570 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D JSY13_05445 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D JSY13_02300 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JSY13_06150 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D JSY13_08610 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D JSY13_07875 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D JSY13_07860 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D JSY13_06825 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D JSY13_06130 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JSY13_07885 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JSY13_00170 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A
D JSY13_01035 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D JSY13_00145 class E sortase K07284 srtA; sortase A [EC:3.4.22.70]
D JSY13_06415 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:mnf01004]
D JSY13_06000 ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D JSY13_05995 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D JSY13_05985 beta-ketoacyl-[acyl-carrier-protein] synthase family protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D JSY13_06985 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D JSY13_05880 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D JSY13_09850 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D JSY13_05765 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_07940 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_04555 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D JSY13_07935 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:mnf01006]
D JSY13_07910 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D JSY13_03235 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D JSY13_07165 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D JSY13_04965 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JSY13_10605 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D JSY13_07080 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:mnf01007]
D JSY13_05270 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSY13_08345 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JSY13_08790 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JSY13_09635 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JSY13_04400 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JSY13_09000 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JSY13_07455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JSY13_07485 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JSY13_07300 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JSY13_01425 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JSY13_01825 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JSY13_03120 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JSY13_11600 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JSY13_01455 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JSY13_04605 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JSY13_06300 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JSY13_06405 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JSY13_08405 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JSY13_08400 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JSY13_10250 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D JSY13_04130 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D JSY13_03775 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D JSY13_08475 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_12145 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D JSY13_07045 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D JSY13_11110 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D JSY13_08370 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D JSY13_10200 gabT; 4-aminobutyrate--2-oxoglutarate transaminase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D JSY13_11510 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D JSY13_05250 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D JSY13_09505 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:mnf00194]
D JSY13_04510 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D JSY13_04505 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D JSY13_04500 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D JSY13_04495 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D JSY13_04490 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D JSY13_04485 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D JSY13_04480 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D JSY13_04475 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:mnf03000]
D JSY13_02555 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JSY13_10110 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D JSY13_00400 DeoR/GlpR transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D JSY13_00640 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JSY13_11310 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JSY13_11780 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JSY13_12075 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JSY13_12350 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D JSY13_10765 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D JSY13_11390 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D JSY13_09890 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D JSY13_11370 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D JSY13_11040 Lrp/AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D JSY13_10610 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JSY13_07645 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D JSY13_08055 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D JSY13_11800 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D JSY13_12100 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D JSY13_04035 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D JSY13_09910 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D JSY13_11340 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D JSY13_11940 winged helix-turn-helix transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D JSY13_02915 helix-turn-helix domain-containing protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D JSY13_10215 helix-turn-helix domain-containing protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D JSY13_04940 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D JSY13_09500 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D JSY13_11655 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D JSY13_03810 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D JSY13_03180 helix-turn-helix transcriptional regulator K07727 K07727; putative transcriptional regulator
D JSY13_11055 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSY13_11125 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D JSY13_03980 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JSY13_04165 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D JSY13_09190 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D JSY13_12375 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JSY13_09650 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D JSY13_07225 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D JSY13_10825 regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D JSY13_07550 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D JSY13_05575 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator
D JSY13_06465 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D JSY13_00425 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D JSY13_07785 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D JSY13_07900 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:mnf03021]
D JSY13_09530 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JSY13_10300 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JSY13_01975 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JSY13_01980 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JSY13_06505 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JSY13_06120 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D JSY13_04190 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JSY13_08120 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D JSY13_04630 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JSY13_06455 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JSY13_10160 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JSY13_00425 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D JSY13_03210 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D JSY13_04430 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:mnf03019]
D JSY13_07430 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D JSY13_05490 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JSY13_04920 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D JSY13_05830 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JSY13_05760 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JSY13_01095 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSY13_03150 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSY13_04855 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D JSY13_04430 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D JSY13_11815 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSY13_09560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSY13_09715 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D JSY13_12310 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D JSY13_10240 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D JSY13_07630 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D JSY13_06780 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D JSY13_09045 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:mnf03011]
D JSY13_07675 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D JSY13_05670 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D JSY13_10410 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D JSY13_06395 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D JSY13_10360 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D JSY13_12260 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D JSY13_10470 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D JSY13_10375 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D JSY13_02095 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D JSY13_10445 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D JSY13_10305 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D JSY13_10475 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D JSY13_10310 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D JSY13_12040 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D JSY13_04780 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D JSY13_05585 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D JSY13_10395 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D JSY13_12250 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D JSY13_10420 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D JSY13_07270 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D JSY13_10135 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D JSY13_10425 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D JSY13_10440 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D JSY13_10435 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D JSY13_10380 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D JSY13_10370 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D JSY13_12245 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D JSY13_10075 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D JSY13_10140 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D JSY13_10070 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D JSY13_02090 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D JSY13_10390 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D JSY13_10350 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D JSY13_10405 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D JSY13_10295 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D JSY13_10365 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D JSY13_05625 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D JSY13_08435 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D JSY13_07420 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D JSY13_10415 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D JSY13_10430 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D JSY13_10385 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D JSY13_07415 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D JSY13_12050 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D JSY13_10400 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D JSY13_10355 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D JSY13_06955 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D JSY13_05485 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D JSY13_12045 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D JSY13_12415 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D JSY13_08440 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D JSY13_08925 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JSY13_10315 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D JSY13_08805 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D JSY13_08325 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:mnf03009]
D JSY13_05490 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JSY13_05830 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D JSY13_07190 era; GTPase Era K03595 era; GTPase
D JSY13_07410 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D JSY13_00425 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D JSY13_04630 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D JSY13_06455 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D JSY13_10160 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D JSY13_08985 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D JSY13_06525 rRNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D JSY13_04980 class I SAM-dependent methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D JSY13_05465 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D JSY13_07215 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D JSY13_12390 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JSY13_07895 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D JSY13_09005 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D JSY13_08295 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D JSY13_09630 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D JSY13_11420 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D JSY13_08900 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JSY13_08240 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D JSY13_07815 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D JSY13_09420 GNAT family N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D JSY13_06085 RimK family alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D JSY13_05595 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D JSY13_07430 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D JSY13_06410 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D JSY13_05760 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D JSY13_04180 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D JSY13_04985 hflX; GTPase HflX K03665 hflX; GTPase
D JSY13_04460 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JSY13_06365 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D JSY13_04645 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D JSY13_07380 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D JSY13_07200 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D JSY13_03335 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D JSY13_05480 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:mnf03016]
D JSY13_05270 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSY13_04605 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D JSY13_07455 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D JSY13_07300 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JSY13_09000 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D JSY13_04400 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JSY13_01425 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D JSY13_01825 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JSY13_06405 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D JSY13_11600 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JSY13_06300 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D JSY13_01455 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D JSY13_09635 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D JSY13_07485 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D JSY13_03120 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D JSY13_08405 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D JSY13_08400 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D JSY13_08345 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JSY13_08790 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D JSY13_07210 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JSY13_06810 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D JSY13_04360 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D JSY13_02075 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D JSY13_04665 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D JSY13_03425 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_05745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_04460 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D JSY13_04965 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D JSY13_12410 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D JSY13_06040 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D JSY13_08605 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D JSY13_06230 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D JSY13_01735 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D JSY13_04960 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D JSY13_05600 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D JSY13_08430 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D JSY13_08900 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D JSY13_05750 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D JSY13_03390 Fe-S cluster assembly protein HesB K13628 iscA; iron-sulfur cluster assembly protein
D JSY13_09695 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D JSY13_01360 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D JSY13_02310 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D JSY13_02320 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D JSY13_02305 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D JSY13_04855 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:mnf03012]
D JSY13_04640 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JSY13_08445 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JSY13_05675 elongation factor Ts K02357 tsf; elongation factor Ts
D JSY13_10460 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JSY13_10465 fusA; elongation factor G K02355 fusA; elongation factor G
D JSY13_04435 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D JSY13_05685 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D JSY13_08800 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D JSY13_10320 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D JSY13_06450 efp; elongation factor P K02356 efp; elongation factor P
D JSY13_08525 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:mnf03110]
D JSY13_11730 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D JSY13_10690 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JSY13_10920 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D JSY13_07530 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D JSY13_11815 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSY13_09560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSY13_07220 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JSY13_11805 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D JSY13_11810 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JSY13_08060 Hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D JSY13_08205 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D JSY13_02340 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JSY13_01375 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D JSY13_04475 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D JSY13_00130 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JSY13_12340 trxA; thioredoxin K03671 TXN; thioredoxin
D JSY13_05725 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:mnf04131]
D JSY13_07440 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D JSY13_11590 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D JSY13_07615 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSY13_09685 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSY13_06595 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JSY13_11910 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:mnf03051]
D JSY13_06800 WYL domain-containing protein K13572 pafB; proteasome accessory factor B
D JSY13_06795 WYL domain-containing protein K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:mnf03032]
D JSY13_00580 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D JSY13_12005 AAA family ATPase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D JSY13_12030 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JSY13_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JSY13_12235 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D JSY13_07135 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D JSY13_05855 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_07800 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSY13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSY13_07275 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSY13_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSY13_03325 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_06950 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_09970 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSY13_05635 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D JSY13_06615 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSY13_05755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JSY13_05050 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JSY13_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JSY13_06165 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JSY13_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JSY13_06160 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JSY13_09820 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:mnf03036]
D JSY13_05490 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D JSY13_09480 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D JSY13_12030 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JSY13_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D JSY13_03385 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D JSY13_05930 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D JSY13_10110 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D JSY13_10610 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D JSY13_05525 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D JSY13_08250 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D JSY13_08245 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D JSY13_08515 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JSY13_07885 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D JSY13_01175 FHA domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JSY13_04925 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D JSY13_07850 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D JSY13_07865 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D JSY13_08510 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JSY13_07845 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JSY13_06255 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D JSY13_07835 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF
D JSY13_08255 ParA family protein K03496 parA; chromosome partitioning protein
D JSY13_12380 AAA family ATPase K03496 parA; chromosome partitioning protein
D JSY13_12375 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D JSY13_12390 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D JSY13_05660 tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D JSY13_08260 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D JSY13_03630 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JSY13_07625 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:mnf03400]
D JSY13_02560 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JSY13_09455 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D JSY13_04260 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D JSY13_12080 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D JSY13_04660 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D JSY13_09530 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D JSY13_00485 (deoxy)nucleoside triphosphate pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JSY13_03445 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D JSY13_06190 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D JSY13_07330 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D JSY13_02555 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D JSY13_01120 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D JSY13_03035 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JSY13_05495 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D JSY13_05915 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JSY13_10670 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D JSY13_08775 endonuclease/exonuclease/phosphatase family protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JSY13_11690 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D JSY13_05755 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D JSY13_06615 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D JSY13_07640 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D JSY13_07655 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D JSY13_07635 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D JSY13_02455 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_03720 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_03735 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D JSY13_01975 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D JSY13_01980 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D JSY13_10300 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D JSY13_06505 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D JSY13_03050 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D JSY13_03285 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D JSY13_03280 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D JSY13_07800 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D JSY13_00010 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D JSY13_07275 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D JSY13_09810 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D JSY13_03325 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_06950 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D JSY13_09970 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D JSY13_05855 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_05050 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JSY13_04950 recA; recombinase RecA K03553 recA; recombination protein RecA
D JSY13_06340 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D JSY13_06345 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D JSY13_06335 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D JSY13_06515 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D JSY13_01705 SMC family ATPase K03546 sbcC; DNA repair protein SbcC/Rad50
D JSY13_01700 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D JSY13_10900 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D JSY13_00015 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D JSY13_05470 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D JSY13_07170 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D JSY13_09965 recR; recombination protein RecR K06187 recR; recombination protein RecR
D JSY13_08285 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D JSY13_08585 Ku protein K10979 ku; DNA end-binding protein Ku
D JSY13_08590 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D JSY13_00030 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JSY13_06165 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D JSY13_00025 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JSY13_06160 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D JSY13_09820 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D JSY13_12030 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D JSY13_01095 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D JSY13_05790 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JSY13_06650 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D JSY13_08485 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D JSY13_08025 DNA polymerase Y family protein K14161 imuB; protein ImuB
D JSY13_08030 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D JSY13_04955 regulatory protein RecX K03565 recX; regulatory protein
D JSY13_10660 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D JSY13_09720 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D JSY13_08265 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D JSY13_09140 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D JSY13_09135 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:mnf03029]
D JSY13_04640 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D JSY13_08445 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D JSY13_05675 elongation factor Ts K02357 tsf; elongation factor Ts
D JSY13_10460 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JSY13_10465 fusA; elongation factor G K02355 fusA; elongation factor G
D JSY13_07190 era; GTPase Era K03595 era; GTPase
D JSY13_08345 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D JSY13_07300 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D JSY13_01825 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D JSY13_11600 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D JSY13_04400 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D JSY13_05780 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D JSY13_05785 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D JSY13_05775 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D JSY13_12005 AAA family ATPase K15255 PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]
D JSY13_05855 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_12255 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D JSY13_11815 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSY13_11810 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D JSY13_09560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSY13_02340 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D JSY13_07220 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D JSY13_11805 DnaJ domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D JSY13_03425 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_05745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_03630 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D JSY13_07080 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D JSY13_07075 COX15/CtaA family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D JSY13_12400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:mnf02000]
D JSY13_02185 ABC transporter ATP-binding protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D JSY13_11485 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D JSY13_11480 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D JSY13_02570 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JSY13_02575 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JSY13_03410 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D JSY13_02935 ABC transporter ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D JSY13_08935 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D JSY13_11870 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D JSY13_11880 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D JSY13_11875 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D JSY13_00530 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JSY13_05150 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D JSY13_00520 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JSY13_05155 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D JSY13_00525 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JSY13_05160 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D JSY13_04755 extracellular solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D JSY13_04765 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D JSY13_04760 ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D JSY13_04750 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D JSY13_10525 maltose ABC transporter substrate-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D JSY13_10520 ABC transporter permease subunit K10109 malF; maltose/maltodextrin transport system permease protein
D JSY13_09615 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JSY13_10515 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D JSY13_12065 carbohydrate ABC transporter substrate-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D JSY13_12060 sugar ABC transporter permease K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D JSY13_12055 carbohydrate ABC transporter permease K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D JSY13_10065 extracellular solute-binding protein K10232 aglE; alpha-glucoside transport system substrate-binding protein
D JSY13_10060 sugar ABC transporter permease K10233 aglF; alpha-glucoside transport system permease protein
D JSY13_10055 carbohydrate ABC transporter permease K10234 aglG; alpha-glucoside transport system permease protein
D JSY13_04390 carbohydrate ABC transporter permease K10202 ngcG; N-acetylglucosamine transport system permease protein
D JSY13_11575 extracellular solute-binding protein K17244 chiE; putative chitobiose transport system substrate-binding protein
D JSY13_08955 sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D JSY13_08960 sugar ABC transporter permease K10547 gguB; putative multiple sugar transport system permease protein
D JSY13_08965 sugar ABC transporter ATP-binding protein K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D JSY13_11290 ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D JSY13_11295 ABC transporter permease K10440 rbsC; ribose transport system permease protein
D JSY13_11300 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D JSY13_08740 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D JSY13_08730 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D JSY13_08725 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D JSY13_08735 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D JSY13_09725 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D JSY13_09730 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D JSY13_09735 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D JSY13_09740 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D JSY13_08420 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D JSY13_08415 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein
D JSY13_08410 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D JSY13_08425 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D JSY13_10130 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JSY13_10125 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D JSY13_10120 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D JSY13_02350 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D JSY13_02370 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D JSY13_02365 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D JSY13_02360 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D JSY13_02355 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D JSY13_08915 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D JSY13_08905 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D JSY13_08910 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D JSY13_00635 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JSY13_01805 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D JSY13_01810 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JSY13_00630 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D JSY13_00625 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JSY13_01815 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D JSY13_03465 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D JSY13_03470 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D JSY13_03475 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D JSY13_03480 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSY13_02550 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D JSY13_07240 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein
D JSY13_07255 ABC transporter permease K13890 gsiC; glutathione transport system permease protein
D JSY13_07250 ABC transporter permease K13891 gsiD; glutathione transport system permease protein
D JSY13_07245 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein
D JSY13_01190 hypothetical protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSY13_01950 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSY13_04310 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSY13_07480 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D JSY13_01955 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSY13_04305 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSY13_07475 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D JSY13_01960 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSY13_04300 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSY13_07470 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D JSY13_04295 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JSY13_07465 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JSY13_01965 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D JSY13_08945 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D JSY13_01675 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D JSY13_01670 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein
D JSY13_01680 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D JSY13_01665 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D JSY13_06960 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D JSY13_11640 metal ABC transporter substrate-binding protein K11601 mntC; manganese transport system substrate-binding protein
D JSY13_11650 metal ABC transporter permease K11602 mntB; manganese transport system permease protein
D JSY13_11645 metal ABC transporter ATP-binding protein K11603 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D JSY13_07030 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D JSY13_07020 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D JSY13_07025 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D JSY13_01045 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JSY13_11460 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein
D JSY13_01050 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JSY13_11465 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D JSY13_11470 ECF transporter S component K16925 ykoE; energy-coupling factor transport system permease protein
D JSY13_12120 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D JSY13_12110 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D JSY13_12115 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D JSY13_03940 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein
D JSY13_08510 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D JSY13_08515 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D JSY13_03845 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSY13_01545 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSY13_01765 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSY13_08630 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSY13_09365 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSY13_11720 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D JSY13_08635 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSY13_09370 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSY13_11715 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSY13_03840 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSY13_03945 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D JSY13_01920 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JSY13_04015 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D JSY13_01915 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JSY13_04010 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D JSY13_07055 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D JSY13_11625 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D JSY13_00955 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D JSY13_10040 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D JSY13_05240 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D JSY13_05300 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D JSY13_03405 DHA2 family efflux MFS transporter permease subunit K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D JSY13_10625 MFS transporter K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein
D JSY13_07665 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D JSY13_11910 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D JSY13_06630 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D JSY13_02850 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D JSY13_04030 aquaporin K06188 aqpZ; aquaporin Z
D JSY13_05565 aquaporin family protein K02440 glpF; glycerol uptake facilitator
D JSY13_06260 ammonium transporter K03320 amt; ammonium transporter, Amt family
D JSY13_09440 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D JSY13_05895 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D JSY13_11980 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D JSY13_01005 CrcB family protein K06199 crcB; fluoride exporter
D JSY13_01010 CrcB family protein K06199 crcB; fluoride exporter
D JSY13_04210 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSY13_04215 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSY13_07195 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSY13_05210 APC family permease K14052 puuP; putrescine importer
D JSY13_08595 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D JSY13_09475 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D JSY13_09050 EamA/RhaT family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D JSY13_02345 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D JSY13_03045 permease K05786 rarD; chloramphenicol-sensitive protein RarD
D JSY13_09590 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D JSY13_02750 L-lactate permease K03303 lutP; lactate permease
D JSY13_00665 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D JSY13_09460 cation acetate symporter K14393 actP; cation/acetate symporter
D JSY13_03105 Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D JSY13_00775 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D JSY13_01755 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D JSY13_00770 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D JSY13_01750 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D JSY13_02530 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D JSY13_00265 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D JSY13_00275 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D JSY13_00280 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D JSY13_00285 sodium:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D JSY13_00290 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D JSY13_06130 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D JSY13_10115 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D JSY13_05845 LysE family transporter K05834 rhtB; homoserine/homoserine lactone efflux protein
D JSY13_03565 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D JSY13_03570 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D JSY13_03200 AI-2E family transporter K20469 K20469; putative heme transporter
D JSY13_06860 VIT1/CCC1 transporter family protein K22736 VIT; vacuolar iron transporter family protein
D JSY13_07865 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D JSY13_01845 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D JSY13_02135 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JSY13_02255 polysaccharide biosynthesis tyrosine autokinase K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D JSY13_11985 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:mnf02044]
D JSY13_08010 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSY13_08565 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSY13_09845 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSY13_08560 type II secretion system F family protein K12510 tadB; tight adherence protein B
D JSY13_08555 type II secretion system F family protein K12511 tadC; tight adherence protein C
D JSY13_07830 YggT family protein K02221 yggT; YggT family protein
D JSY13_07295 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D JSY13_07290 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D JSY13_04110 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D JSY13_06355 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D JSY13_10165 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D JSY13_06360 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D JSY13_07600 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D JSY13_10345 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D JSY13_05555 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D JSY13_05530 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D JSY13_06350 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D JSY13_12400 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D JSY13_06790 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D JSY13_03625 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D JSY13_06785 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:mnf02042]
D JSY13_04210 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSY13_04215 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSY13_07195 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D JSY13_03230 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:mnf02022]
D JSY13_09665 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D JSY13_09660 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D JSY13_00785 DUF4118 domain-containing protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D JSY13_00780 response regulator transcription factor K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D JSY13_04075 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D JSY13_04070 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D JSY13_08850 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JSY13_09550 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D JSY13_07515 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JSY13_08845 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JSY13_09545 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D JSY13_09360 sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D JSY13_09355 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D JSY13_04160 histidine kinase N-terminal domain-containing protein K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D JSY13_06605 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:mnf02035]
D JSY13_10130 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D JSY13_08010 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D JSY13_08565 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D JSY13_09845 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:mnf04812]
D JSY13_07845 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JSY13_08255 ParA family protein K03496 parA; chromosome partitioning protein
D JSY13_12380 AAA family ATPase K03496 parA; chromosome partitioning protein
D JSY13_12375 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:mnf04147]
D JSY13_03150 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D JSY13_07615 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D JSY13_07610 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D JSY13_06595 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D JSY13_00130 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D JSY13_09560 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D JSY13_11815 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D JSY13_07095 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_09110 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D JSY13_02375 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JSY13_02395 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D JSY13_10460 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D JSY13_07210 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D JSY13_05765 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_07940 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D JSY13_05140 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D JSY13_10340 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D JSY13_00840 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D JSY13_08360 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D JSY13_00320 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D JSY13_11825 amidohydrolase family protein K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D JSY13_11025 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D JSY13_05730 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D JSY13_05560 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D JSY13_06055 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_06070 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_10950 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D JSY13_11515 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D JSY13_05230 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSY13_11275 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D JSY13_02545 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D JSY13_06105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_07980 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D JSY13_11165 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D JSY13_07100 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSY13_10080 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D JSY13_07605 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D JSY13_09685 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D JSY13_05275 lipocalin family protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:mnf02048]
D JSY13_05050 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D JSY13_00505 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D JSY13_00500 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D JSY13_07845 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D JSY13_05270 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D JSY13_03425 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D JSY13_05745 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:mnf01504]
D JSY13_10625 MFS transporter K18833 cmr; MFS transporter, DHA3 family, multidrug efflux protein
D JSY13_05240 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D JSY13_05300 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D JSY13_11615 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D JSY13_01035 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:mnf03100]
D JSY13_08325 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D JSY13_06040 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D JSY13_04995 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D JSY13_08820 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D JSY13_08810 alcohol dehydrogenase catalytic domain-containing protein K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264]
D JSY13_09035 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D JSY13_08980 mgrA; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D JSY13_00615 FAD-binding oxidoreductase K25952 socD; fructosyl amine oxidase (glucosone-forming) [EC:1.5.3.25]
D JSY13_08690 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D JSY13_05850 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D JSY13_09580 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D JSY13_04175 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JSY13_09940 bcp; thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D JSY13_04880 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D JSY13_01085 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D JSY13_10545 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JSY13_11890 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D JSY13_01260 NrdH-redoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D JSY13_00745 arsenate reductase ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D JSY13_06775 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D JSY13_06580 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D JSY13_08860 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D JSY13_06060 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D JSY13_11285 aryldialkylphosphatase K23149 E3.1.1.104; 5-phospho-D-xylono-1,4-lactonase [EC:3.1.1.104]
D JSY13_08070 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D JSY13_11050 carboxylesterase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D JSY13_05875 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D JSY13_04325 tyrosine-protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D JSY13_03690 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D JSY13_11415 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D JSY13_08995 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D JSY13_00245 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D JSY13_12000 beta-lactamase family protein K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D JSY13_07120 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JSY13_07945 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D JSY13_03770 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D JSY13_00360 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JSY13_01135 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JSY13_04050 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JSY13_10010 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D JSY13_11315 transport protein RbsD/FucU K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D JSY13_11305 sugar phosphate isomerase/epimerase K18910 dpe; D-psicose/D-tagatose/L-ribulose 3-epimerase [EC:5.1.3.30 5.1.3.31]
D JSY13_12360 TIM barrel protein K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41]
D JSY13_04770 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D JSY13_11345 cadA; cadmium-translocating P-type ATPase K12954 ctpG; cation-transporting P-type ATPase G [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D JSY13_02745 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D JSY13_02740 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D JSY13_02735 LUD domain-containing protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D JSY13_04375 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D JSY13_11170 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
D JSY13_00475 dodecin domain-containing protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D JSY13_09145 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D JSY13_10665 EI24 domain-containing protein K06203 cysZ; CysZ protein
D JSY13_10865 VOC family protein K08234 yaeR; glyoxylase I family protein
D JSY13_07840 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D JSY13_09105 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D JSY13_03965 O-antigen ligase family protein K16567 exoQ; exopolysaccharide production protein ExoQ
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D JSY13_08080 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D JSY13_11710 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D JSY13_10640 alpha/beta fold hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D JSY13_00225 cold-shock protein K03704 cspA; cold shock protein
D JSY13_00765 cold-shock protein K03704 cspA; cold shock protein
D JSY13_09515 cold shock domain-containing protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D JSY13_05810 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D JSY13_07570 trigger factor K03545 tig; trigger factor
D JSY13_08505 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D JSY13_09150 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH
D JSY13_05650 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D JSY13_01850 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D JSY13_10575 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D JSY13_05645 YraN family protein K07460 yraN; putative endonuclease
D JSY13_05450 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D JSY13_12385 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D JSY13_05655 dprA; DNA-processing protein DprA K04096 smf; DNA processing protein
D JSY13_06390 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D JSY13_01310 transposase K07483 K07483; transposase
D JSY13_01560 transposase K07483 K07483; transposase
D JSY13_02710 transposase K07483 K07483; transposase
D JSY13_02755 transposase K07483 K07483; transposase
D JSY13_02975 transposase K07483 K07483; transposase
D JSY13_03545 transposase K07483 K07483; transposase
D JSY13_05060 transposase K07483 K07483; transposase
D JSY13_05100 transposase K07483 K07483; transposase
D JSY13_05355 transposase K07483 K07483; transposase
D JSY13_06850 helix-turn-helix domain-containing protein K07483 K07483; transposase
D JSY13_08135 transposase K07483 K07483; transposase
D JSY13_09395 transposase K07483 K07483; transposase
D JSY13_01565 IS110 family transposase K07486 K07486; transposase
D JSY13_02730 transposase K07486 K07486; transposase
D JSY13_05070 IS110 family transposase K07486 K07486; transposase
D JSY13_05080 IS110 family transposase K07486 K07486; transposase
D JSY13_09930 IS110 family transposase K07486 K07486; transposase
D JSY13_10975 IS110 family transposase K07486 K07486; transposase
D JSY13_01305 IS3 family transposase K07497 K07497; putative transposase
D JSY13_01555 IS3 family transposase K07497 K07497; putative transposase
D JSY13_02705 IS3 family transposase K07497 K07497; putative transposase
D JSY13_02760 IS3 family transposase K07497 K07497; putative transposase
D JSY13_02980 IS3 family transposase K07497 K07497; putative transposase
D JSY13_03540 IS3 family transposase K07497 K07497; putative transposase
D JSY13_05055 IS3 family transposase K07497 K07497; putative transposase
D JSY13_05095 IS3 family transposase K07497 K07497; putative transposase
D JSY13_09400 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D JSY13_04345 PspA/IM30 family protein K03969 pspA; phage shock protein A
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D JSY13_09025 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D JSY13_01060 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JSY13_03135 APC family permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D JSY13_02495 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D JSY13_08095 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D JSY13_05920 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D JSY13_05865 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D JSY13_12395 DNA-binding protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D JSY13_03250 carbon starvation protein A K06200 cstA; carbon starvation protein
D JSY13_03500 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D JSY13_07205 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D JSY13_03245 PhoH family protein K07175 phoH2; PhoH-like ATPase
D JSY13_10530 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
C 99994 Others
D JSY13_09670 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D JSY13_00760 NAD(P)-binding domain-containing protein K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D JSY13_07695 PHP domain-containing protein K04477 ycdX; putative hydrolase
D JSY13_05890 globin K06886 glbN; hemoglobin
D JSY13_01865 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D JSY13_07070 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D JSY13_07065 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D JSY13_04410 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D JSY13_05950 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D JSY13_06245 SufE family protein K02426 sufE; cysteine desulfuration protein SufE
D JSY13_10025 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein
D JSY13_01650 VOC family protein K04750 phnB; PhnB protein
D JSY13_03125 VOC family protein K04750 phnB; PhnB protein
D JSY13_03190 LemA family protein K03744 lemA; LemA protein
D JSY13_01935 SprT-like domain-containing protein K02742 sprT; SprT protein
D JSY13_07310 DedA family protein K03975 dedA; membrane-associated protein
D JSY13_08580 VTT domain-containing protein K03975 dedA; membrane-associated protein
D JSY13_00305 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D JSY13_01860 YhgE/Pip family protein K01421 yhgE; putative membrane protein
D JSY13_12150 phage holin family protein K08972 K08972; putative membrane protein
D JSY13_01410 PH domain-containing protein K08981 K08981; putative membrane protein
D JSY13_06025 hypothetical protein K09858 K09858; SEC-C motif domain protein
C 99997 Function unknown
D JSY13_09030 thioredoxin domain-containing protein K06888 K06888; uncharacterized protein
D JSY13_06240 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D JSY13_07710 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D JSY13_05590 RNA-binding protein K06960 K06960; uncharacterized protein
D JSY13_01090 N-acetyltransferase K06975 K06975; uncharacterized protein
D JSY13_01695 N-acetyltransferase K06975 K06975; uncharacterized protein
D JSY13_08105 VOC family protein K06996 K06996; uncharacterized protein
D JSY13_11260 VOC family protein K06996 K06996; uncharacterized protein
D JSY13_05710 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D JSY13_03655 dienelactone hydrolase family protein K07020 K07020; uncharacterized protein
D JSY13_11605 VOC family protein K07032 K07032; uncharacterized protein
D JSY13_10945 amidohydrolase family protein K07045 K07045; uncharacterized protein
D JSY13_01250 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D JSY13_02065 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein
D JSY13_12095 permease K07089 K07089; uncharacterized protein
D JSY13_01820 TSUP family transporter K07090 K07090; uncharacterized protein
D JSY13_10280 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D JSY13_09870 metallophosphoesterase K07098 K07098; uncharacterized protein
D JSY13_02785 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D JSY13_09625 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D JSY13_04905 SDR family oxidoreductase K07124 K07124; uncharacterized protein
D JSY13_06030 DNA-binding protein K07164 K07164; uncharacterized protein
D JSY13_12405 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D JSY13_03160 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D JSY13_03750 UPF0182 family protein K09118 K09118; uncharacterized protein
D JSY13_01405 PH domain-containing protein K09167 K09167; uncharacterized protein
D JSY13_00570 DUF503 domain-containing protein K09764 K09764; uncharacterized protein
D JSY13_09020 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D JSY13_04990 SIMPL domain-containing protein K09807 K09807; uncharacterized protein
D JSY13_04515 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D JSY13_03195 YcaQ family DNA glycosylase K09927 K09927; uncharacterized protein
D JSY13_11220 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein
D JSY13_12295 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D JSY13_03490 zf-TFIIB domain-containing protein K09981 K09981; uncharacterized protein
D JSY13_10560 hypothetical protein K07586 ygaC; uncharacterized protein
D JSY13_04635 YlxR family protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024