+E Ribosome biogenesis KO
#
Ribosome Biogenesis - Mustela nigripes (black-footed ferret)
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 132005337 FBL; rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 132027823 FBLL1; rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
D 132008149 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 132021784 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 132013464 NOP58; nucleolar protein 58 K14565 NOP58; nucleolar protein 58
D 132019173 SNU13; NHP2-like protein 1 isoform X1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13
C Box H/ACA snoRNPs
D 132006787 DKC1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 132007691 H/ACA ribonucleoprotein complex subunit 1-like K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 132002179 GAR1; H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 132013220 H/ACA ribonucleoprotein complex subunit 1-like K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1
D 132027403 NHP2; H/ACA ribonucleoprotein complex subunit 2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2
D 131998676 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D 132013771 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1
D 132011498 SHQ1; protein SHQ1 homolog K14764 SHQ1; protein SHQ1
B 90S particles
C U3 small nucleolar RNA-associated proteins
D 132029127 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3
D 132002808 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4
D 131999113 MPHOSPH10; U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10
D 131999814 NGDN; neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5
D 132019156 RRP7A; ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7
D 132012450 PWP2; periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2
D 132003923 NOP14; nucleolar protein 14 isoform X1 K14766 NOP14; nucleolar protein 14
D 132006873 UTP3; something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3
D 132005369 UTP4; U3 small nucleolar RNA-associated protein 4 homolog isoform X1 K14548 UTP4; U3 small nucleolar RNA-associated protein 4
D 132021251 WDR43; WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5
D 132003540 UTP6; U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6
D 132022618 LOW QUALITY PROTEIN: WD repeat-containing protein 46-like K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D 132017875 WDR46; WD repeat-containing protein 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7
D 132016199 HEATR1; HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10
D 132002248 UTP11; probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11
D 132001373 WDR3; WD repeat-containing protein 3 K14556 DIP2; U3 small nucleolar RNA-associated protein 12
D 132027026 TBL3; transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13
D 132007278 UTP14A; U3 small nucleolar RNA-associated protein 14 homolog A isoform X1 K14567 UTP14; U3 small nucleolar RNA-associated protein 14
D 132028724 UTP15; U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15
D 132013379 WDR75; WD repeat-containing protein 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
D 132010765 LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D 132004585 UTP18; U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18
D 132023050 NOC4L; nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19
D 132019330 UTP20; small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20
D 132028841 WDR36; WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21
D 132024661 NOL6; nucleolar protein 6 K14544 UTP22; U3 small nucleolar RNA-associated protein 22
D 132014246 UTP23; rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23
D 132010249 LOW QUALITY PROTEIN: rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 132028041 rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 132000169 FCF1; rRNA-processing protein FCF1 homolog isoform X1 K14566 UTP24; U3 small nucleolar RNA-associated protein 24
D 132025543 UTP25; U3 small nucleolar RNA-associated protein 25 homolog isoform X1 K14774 UTP25; U3 small nucleolar RNA-associated protein 25
D 132026894 RSL1D1; ribosomal L1 domain-containing protein 1 K14775 UTP30; ribosome biogenesis protein UTP30
C Helicases
D 132013145 DDX10; probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7]
D 132004100 ATP-dependent RNA helicase DDX18-like K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 132013945 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 132019502 DDX47; probable ATP-dependent RNA helicase DDX47 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7]
D 132011204 DDX49; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
D 132003884 DDX52; probable ATP-dependent RNA helicase DDX52 isoform X1 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
D 132005051 DHX15; ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
D 132023071 DHX37; probable ATP-dependent RNA helicase DHX37 isoform X1 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
D 132003324 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
C GTPase
D 132016603 BMS1; ribosome biogenesis protein BMS1 homolog isoform X1 K14569 BMS1; ribosome biogenesis protein BMS1
C RNase
D 132028224 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D 132024280 REXO4; RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-]
D 132009993 DBR1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-]
C Kinase
D 132020395 LOW QUALITY PROTEIN: casein kinase II subunit alpha'-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 132006048 CSNK2A2; casein kinase II subunit alpha' isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 132021808 CSNK2A1; casein kinase II subunit alpha isoform X1 K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1]
D 132017129 casein kinase II subunit beta-like K03115 CSNK2B; casein kinase II subunit beta
D 132017799 CSNK2B; casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta
C Other 90S particles
D 132003168 AATF; protein AATF isoform X1 K14782 AATF; protein AATF/BFR2
D 132012272 CMSS1; protein CMSS1 isoform X1 K14784 CMS1; protein CMS1
D 132019901 EMG1; ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]
D 132017673 ABT1; activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein
D 132010978 KRI1; protein KRI1 homolog isoform X1 K14786 KRI1; protein KRI1
D 132019405 KRR1; KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein
D 132023192 RBM19; probable RNA-binding protein 19 isoform X1 K14787 MRD1; multiple RNA-binding domain-containing protein 1
D 132021521 NAT10; RNA cytidine acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-]
D 132013636 NCL; nucleolin K11294 NCL; nucleolin
D 132021135 NOL10; nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2
D 131999846 NOP9; nucleolar protein 9 isoform X1 K14790 NOP9; nucleolar protein 9
D 131999507 PINX1; PIN2/TERF1-interacting telomerase inhibitor 1 isoform X1 K11135 PINX1; Pin2-interacting protein X1
D 132019286 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 132024861 RCL1; RNA 3'-terminal phosphate cyclase-like protein isoform X1 K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein
D 132016748 PDCD11; protein RRP5 homolog isoform X1 K14792 RRP5; rRNA biogenesis protein RRP5
D 132011378 RRP9; U3 small nucleolar RNA-interacting protein 2 K14793 RRP9; ribosomal RNA-processing protein 9
D 132016664 RRP12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 132022391 RRP36; LOW QUALITY PROTEIN: ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36
D 132028324 TCOF1; treacle protein isoform X1 K14562 TCOF1; Treacher Collins syndrome protein
D 132013758 LOW QUALITY PROTEIN: treacle protein-like K14562 TCOF1; Treacher Collins syndrome protein
D 132015152 LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13-like K11806 DCAF13; DDB1- and CUL4-associated factor 13
D 132002592 LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 13-like K11806 DCAF13; DDB1- and CUL4-associated factor 13
D 132014223 DCAF13; DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13
B Pre-40S particles
C Kinases
D 132017586 RIOK1; serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D 132028003 RIOK2; serine/threonine-protein kinase RIO2 isoform X1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1]
C Export and cytoplasmic maturation factors
D 132028672 DIMT1; probable dimethyladenosine transferase isoform X1 K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]
D 132026625 BUD23; probable 18S rRNA (guanine-N(7))-methyltransferase isoform X1 K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309]
D 132013818 METTL5; rRNA N6-adenosine-methyltransferase METTL5 isoform X1 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5
D 132018061 BYSL; bystin K14797 ENP1; essential nuclear protein 1
D 132018211 LTV1; protein LTV1 homolog K14798 LTV1; protein LTV1
D 132005358 NOB1; RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1
D 132023063 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 132026042 adenylate kinase isoenzyme 6-like K18532 AK6; adenylate kinase [EC:2.7.4.3]
D 132028703 AK6; adenylate kinase isoenzyme 6 K18532 AK6; adenylate kinase [EC:2.7.4.3]
D 132003530 TSR1; pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1
D 132006933 TSR2; pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2
D 132027059 TSR3; 18S rRNA aminocarboxypropyltransferase K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157]
D 132008569 PDCD2; programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4
D 132005437 PDCD2L; programmed cell death protein 2-like isoform X1 K14801 TSR4; pre-rRNA-processing protein TSR4
D 132019206 RPS19BP1; active regulator of SIRT1 K26536 RPS19BP1; active regulator of SIRT1
D 132021522 XPO1; exportin-1 K14290 XPO1; exportin-1
D 132004216 KPNB1; importin subunit beta-1 K14293 KPNB1; importin subunit beta-1
D 132028717 TNPO1; transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 131999835 IPO4; importin-4 K20221 IPO4; importin-4
D 132002908 IPO5; importin-5 K20222 IPO5; importin-5
D 132023213 IPO7; importin-7 isoform X1 K20223 IPO7; importin-7
D 132025601 IPO9; importin-9 isoform X1 K20224 IPO9; importin-9
C Other pre-40S particles
D 132002552 phospholipid-transporting ATPase IB isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 132002948 phospholipid-transporting ATPase IB-like K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 132005767 ATP8A1; phospholipid-transporting ATPase IA isoform X1 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1]
D 131999709 EIF3J; eukaryotic translation initiation factor 3 subunit J isoform X1 K03245 EIF3J; translation initiation factor 3 subunit J
D 131999932 ABCE1; ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
B Pre-60S particles
C Helicases
D 132003987 DDX5; probable ATP-dependent RNA helicase DDX5 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
D 132004100 ATP-dependent RNA helicase DDX18-like K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 132013945 DDX18; ATP-dependent RNA helicase DDX18 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7]
D 132016353 DDX21; nucleolar RNA helicase 2 isoform X1 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]
D 132000222 DDX24; ATP-dependent RNA helicase DDX24 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]
D 132022007 DDX27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
D 132024301 DDX31; probable ATP-dependent RNA helicase DDX31 isoform X1 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7]
D 132023051 DDX51; LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
D 132023180 DDX54; ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
D 132023085 DDX55; LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
D 132016075 DDX56; probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7]
D 132028643 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
C GTPases
D 132011406 GNL3; guanine nucleotide-binding protein-like 3 K14538 NUG1; nuclear GTP-binding protein
D 132006931 GNL3L; guanine nucleotide-binding protein-like 3-like protein isoform X1 K14538 NUG1; nuclear GTP-binding protein
D 132002230 GNL2; nucleolar GTP-binding protein 2 K14537 NUG2; nuclear GTP-binding protein
D 132020007 GTPBP4; GTP-binding protein 4 K06943 NOG1; nucleolar GTP-binding protein
D 132011922 LSG1; large subunit GTPase 1 homolog isoform X1 K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-]
D 131998990 EFL1; elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-]
C RNases
D 132028022 REXO2; oligoribonuclease, mitochondrial isoform X1 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D 132010728 REXO1; RNA exonuclease 1 homolog isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 132027308 REXO5; LOW QUALITY PROTEIN: RNA exonuclease 5 K14570 REX1; RNA exonuclease [EC:3.1.-.-]
D 132012172 XRN1; 5'-3' exoribonuclease 1 isoform X1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
D 132021687 XRN2; 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D RNase MRP
E 132014194 POP1; ribonucleases P/MRP protein subunit POP1 isoform X1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
E 132004774 LOW QUALITY PROTEIN: ribonuclease P protein subunit p29-like K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E 132004918 ribonuclease P protein subunit p29-like K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
E 132023826 POP5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
E 132016616 RPP30; ribonuclease P protein subunit p30 isoform X1 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
E 132026564 POP7; ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
E 132024647 RPP25L; ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 131999159 RPP25; ribonuclease P protein subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
E 132020149 RPP38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
E 132018762 RPP40; ribonuclease P protein subunit p40 isoform X1 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
C Kinases
D 132000675 NOL9; polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
C Export and cytoplasmic maturation factors
D 132015561 ABCF2; ATP-binding cassette sub-family F member 2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2
D 132027747 DNAJC21; dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5
D 132021864 EIF6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6
D 132017812 HSPA1L; heat shock 70 kDa protein 1-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 132017813 heat shock 70 kDa protein 1-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 132017814 heat shock 70 kDa protein 1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 132026749 HSPA8; heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 132027862 heat shock cognate 71 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 132013920 heat shock cognate 71 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D 132000030 HSPA2; heat shock-related 70 kDa protein 2 K26598 HSPA2; heat shock 70kDa protein 2
D 132001617 MRTO4; mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4
D 132014530 mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4
D 132012075 NMD3; 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3
D 132019855 NXF1; nuclear RNA export factor 1 K14284 NXF; nuclear RNA export factor
D 132027821 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
D 132006695 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
D 132006752 nuclear RNA export factor 2-like isoform X1 K14284 NXF; nuclear RNA export factor
D 132007049 LOW QUALITY PROTEIN: nuclear RNA export factor 3-like K14284 NXF; nuclear RNA export factor
D 132007756 NXT2; NTF2-related export protein 2 K14285 NXT1_2; NTF2-related export protein 1/2
D 132022642 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
D 132023063 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 132028218 ZNF622; cytoplasmic 60S subunit biogenesis factor ZNF622 K14816 REI1; pre-60S factor REI1
D 132027288 SBDS; ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1
D 132028497 AFG2A; ATPase family gene 2 protein homolog A K14575 AFG2; AAA family ATPase
D 131999721 AFG2B; ATPase family gene 2 protein homolog B isoform X1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10]
D 132000274 CINP; cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein
D 132002232 AIRIM; AFG2-interacting ribosome maturation factor K26053 C1ORF109; ribosome biogenesis protein C1orf109
D 132021522 XPO1; exportin-1 K14290 XPO1; exportin-1
D 132004216 KPNB1; importin subunit beta-1 K14293 KPNB1; importin subunit beta-1
D 132028717 TNPO1; transportin-1 isoform X1 K18752 TNPO1; transportin-1
D 131999835 IPO4; importin-4 K20221 IPO4; importin-4
D 132002908 IPO5; importin-5 K20222 IPO5; importin-5
D 132023213 IPO7; importin-7 isoform X1 K20223 IPO7; importin-7
D 132025601 IPO9; importin-9 isoform X1 K20224 IPO9; importin-9
D 132025749 DUSP12; dual specificity protein phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48]
C 5-FMC complex
D 132024560 TEX10; testis-expressed protein 10 isoform X1 K14827 IPI1; pre-rRNA-processing protein IPI1
D 132010689 WDR18; WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3
D 132006683 LAS1L; ribosomal biogenesis protein LAS1L isoform X1 K16912 LAS1; ribosomal biogenesis protein LAS1
D 132004487 PELP1; proline-, glutamic acid- and leucine-rich protein 1 isoform X1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1
D 132003297 SENP3; sentrin-specific protease 3 K08593 SENP3; sentrin-specific protease 3 [EC:3.4.22.68]
C Ribosome quality control proteins
D 132012333 LTN1; E3 ubiquitin-protein ligase listerin isoform X1 K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
D 132004792 TCF25; ribosome quality control complex subunit TCF25 K24970 TCF25; transcription factor 25
D 131999922 NEMF; ribosome quality control complex subunit NEMF K24971 NEMF; nuclear export mediator factor NEMF
D 132024636 VCP; transitional endoplasmic reticulum ATPase isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase
D 132004440 NPLOC4; nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4
D 132023427 UFD1; ubiquitin recognition factor in ER-associated degradation protein 1 K14016 UFD1; ubiquitin fusion degradation protein 1
D 132021185 PTRHD1; putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29]
D 132013570 ANKZF1; tRNA endonuclease ANKZF1 isoform X1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1
C Other pre-60S particles
D 132028239 BRIX1; ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1
D 132000855 zinc finger protein 593 K14821 BUD20; bud site selection protein 20
D 132001838 ZNF593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20
D 132020592 CCDC86; coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1
D 132000710 EBNA1BP2; probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2
D 132014391 BOP1; ribosome biogenesis protein BOP1 isoform X1 K14824 ERB1; ribosome biogenesis protein ERB1
D 132001136 TMED5; transmembrane emp24 domain-containing protein 5 isoform X1 K14825 TMED5; p24 family protein gamma-2
D 132017597 PAK1IP1; p21-activated protein kinase-interacting protein 1 K14830 MAK11; protein MAK11
D 132006510 MAK16; protein MAK16 homolog K14831 MAK16; protein MAK16
D 132021289 CEBPZ; CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21
D 132018298 MDN1; midasin K14572 MDN1; midasin
D 132005378 NIP7; 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7
D 132001998 NOC2L; nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2
D 132016640 NOC3L; nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3
D 132019927 NOP2; probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1 K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310]
D 132015735 RBM28; RNA-binding protein 28 K14573 NOP4; nucleolar protein 4
D 132024873 NOL8; nucleolar protein 8 isoform X1 K14836 NOP8; nucleolar protein 8
D 132015156 RBM34; RNA-binding protein 34 K14837 NOP12; nucleolar protein 12
D 132013073 NIFK; MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15
D 132006154 NOP53; ribosome biogenesis protein NOP53 isoform X1 K14840 NOP53; nucleolar protein 53
D 132019862 WDR74; WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1
D 132009967 ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2
D 132028732 NSA2; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2
D 132023333 PES1; pescadillo homolog K14843 PES1; pescadillo
D 132024851 PUM3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6
D 132019286 PWP1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1
D 132017824 DXO; decapping and exoribonuclease protein K14845 RAI1; RAT1-interacting protein
D 132000193 RIOX1; ribosomal oxygenase 1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69]
D 132012284 RIOX2; ribosomal oxygenase 2 K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66]
D 132025528 NVL; nuclear valosin-containing protein-like K14571 RIX7; ribosome biogenesis ATPase
D 132001068 RPF1; ribosome production factor 1 K14846 RPF1; ribosome production factor 1
D 132017491 RPF2; ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2
D 132004904 GRWD1; glutamate-rich WD repeat-containing protein 1 isoform X1 K14848 RRB1; ribosome assembly protein RRB1
D 132012442 RRP1B; ribosomal RNA processing protein 1 homolog B isoform X1 K14849 RRP1; ribosomal RNA-processing protein 1
D 132012445 RRP1; ribosomal RNA processing protein 1 homolog A isoform X1 K14849 RRP1; ribosomal RNA-processing protein 1
D 132023476 RRP8; ribosomal RNA-processing protein 8 isoform X1 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287]
D 132016664 RRP12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12
D 132019242 NOL12; nucleolar protein 12 isoform X1 K14851 RRP17; ribosomal RNA-processing protein 17
D 132014055 RRS1; ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis
D 132003607 NLE1; notchless protein homolog 1 isoform X1 K14855 RSA4; ribosome assembly protein 4
D 132007240 SDAD1; protein SDA1 homolog isoform X1 K14856 SDA1; protein SDA1
D 132004261 FTSJ3; pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 isoform X1 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
D 132011115 LOW QUALITY PROTEIN: suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2
D 132000636 TMA16; translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16
D 132012351 URB1; nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1
D 132016132 URB2; unhealthy ribosome biogenesis protein 2 homolog isoform X1 K14862 URB2; nucleolar pre-ribosomal-associated protein 2
D 132013471 WDR12; ribosome biogenesis protein WDR12 K14863 WDR12; ribosome biogenesis protein
D 132003009 NUFIP1; FMR1-interacting protein NUFIP1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1
D 132004515 ZNHIT3; zinc finger HIT domain-containing protein 3 isoform X1 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3
B Other ribosome biogenesis factors
C 132016868 BCCIP; BRCA2 and CDKN1A-interacting protein K15262 BCP1; protein BCP1
C 132004388 LYAR; cell growth-regulating nucleolar protein K15263 LYER; cell growth-regulating nucleolar protein
C 132000818 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 isoform X1 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
C 132026615 NSUN5; 28S rRNA (cytosine-C(5))-methyltransferase isoform X1 K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311]
C 132009318 mitochondrial dimethyladenosine transferase 1 K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-]
C 132018413 TFB1M; dimethyladenosine transferase 1, mitochondrial isoform X1 K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-]
C 132003495 MRM1; rRNA methyltransferase 1, mitochondrial isoform X1 K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]
C 132015780 BMT2; S-adenosylmethionine sensor upstream of mTORC1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286]
C 132004173 MRM3; rRNA methyltransferase 3, mitochondrial isoform X1 K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-]
C 132005121 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 isoform X1 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-]
C 132006011 DDX28; probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7]
C 132004479 DHX33; ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6]
C 132017571 IGHMBP2; DNA-binding protein SMUBP-2 isoform X1 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3]
C 132029083 ISG20; interferon-stimulated gene 20 kDa protein K12579 ISG20; interferon-stimulated gene 20 kDa protein [EC:3.1.13.1]
C 132025846 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-]
C 132026796 KDM8; bifunctional peptidase and arginyl-hydroxylase JMJD5 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
C 132006800 PHF6; PHD finger protein 6 isoform X1 K23310 PHF6; PHD finger protein 6
C 132003542 protein SLFN14-like isoform X1 K24445 SLFN14; protein SLFN14 [EC:3.1.-.-]
C 132003584 ERAL1; GTPase Era, mitochondrial K03595 era; GTPase
C 132019299 NOPCHAP1; NOP protein chaperone 1 K26142 NOPCHAP1; NOP protein chaperone 1
C 132019790 PA2G4; proliferation-associated protein 2G4 K26736 PA2G4; ERBB-3 binding protein
C 132016911 MTG1; mitochondrial ribosome-associated GTPase 1 isoform X1 K19828 MTG1; mitochondrial GTPase 1
C 132022084 MTG2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-]
C 132006627 NOA1; nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1
#
AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
D 132008149 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 132021784 nucleolar protein 56 K14564 NOP56; nucleolar protein 56
D 132024283 RPL7A; large ribosomal subunit protein eL8 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
C Box H/ACA snoRNPs
D 132006787 DKC1; H/ACA ribonucleoprotein complex subunit DKC1 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
D 131998676 NOP10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
B rRNA transcription factors
B rRNA modification factors
C 16S rRNA modification factors
C 23S rRNA modification factors
D 132026431 MRM2; rRNA methyltransferase 2, mitochondrial K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
B ribosomal protein modification factors
B rRNA processing factors
C 132028224 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
B rRNA helicases
B GTPases
C 132003584 ERAL1; GTPase Era, mitochondrial K03595 era; GTPase
C 132022084 MTG2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C 132002240 YRDC; threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
D 132004653 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 132004654 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 132007991 small nucleolar RNA U3 K14483 SNORD3; small nucleolar RNA SNORD3
D 132022939 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12
D 132022938 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12
D 132022937 small nucleolar SNORD12/SNORD106 K14907 SNORD12; small nucleolar RNA SNORD12
D 132018902 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132014813 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132006650 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132014812 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132021047 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132004638 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132002389 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132006250 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132007976 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132012762 small nucleolar RNA U13 K26291 SNORD13; small nucleolar RNA SNORD13
D 132009493 small nucleolar RNA SNORD15 K14921 SNORD15; small nucleolar RNA SNORD15
D 132022935 small nucleolar RNA SNORD17 K26292 SNORD17; small nucleolar RNA SNORD17
D 132000465 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18
D 132000466 small nucleolar RNA SNORD18 K14866 SNORD18; small nucleolar RNA SNORD18
D 132009506 small nucleolar RNA SNORD22 K26294 SNORD22; small nucleolar RNA SNORD22
D 132006230 small nucleolar RNA Z195/SNORD33/SNORD32 family K14881 SNORD32_33; small nucleolar RNA SNORD32/33
D 132006231 small nucleolar RNA Z195/SNORD33/SNORD32 family K14881 SNORD32_33; small nucleolar RNA SNORD32/33
D 132006232 small nucleolar RNA SNORD34 K14888 SNORD34; small nucleolar RNA SNORD34
D 132002371 small nucleolar RNA SNORD38 K14887 SNORD38; small nucleolar RNA SNORD38
D 132021029 small nucleolar RNA SNORD59 K14880 SNORD59; small nucleolar RNA SNORD59
D 132027344 small nucleolar RNA SNORD60 K14875 SNORD60; small nucleolar RNA SNORD60
D 132004605 U8 small nucleolar RNA K27110 SNORD118; small nucleolar RNA SNORD118
C SnoRNAs act as guides for 2'-O-ribose methylation
D 132004611 small nucleolar RNA R38 K14869 SNORD1; small nucleolar RNA SNORD1
D 132012775 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2
D 132000556 small nucleolar RNA SNORD2 K14870 SNORD2; small nucleolar RNA SNORD2
D 132004612 small nucleolar RNA Z17 K27197 SNORD4; small nucleolar RNA SNORD4
D 132009557 small nucleolar RNA SNORD5 K27198 SNORD5; small nucleolar RNA SNORD5
D 132009525 small nucleolar RNA Z40 K27199 SNORD6; small nucleolar RNA SNORD6
D 132014811 small nucleolar RNA SNORD11B K14896 SNORD11; small nucleolar RNA SNORD11
D 132014810 small nucleolar RNA SNORD11 K14896 SNORD11; small nucleolar RNA SNORD11
D 132012761 small nucleolar RNA SNORD19B K14934 SNORD19; small nucleolar RNA SNORD19
D 132014788 small nucleolar RNA SNORD20 K27207 SNORD20; small nucleolar RNA SNORD20
D 132009500 small nucleolar RNA SNORD27 K14900 SNORD27; small nucleolar RNA SNORD27
D 132009496 small nucleolar RNA SNORD29 K14895 SNORD29; small nucleolar RNA SNORD29
D 132009502 small nucleolar RNA SNORD30 K26298 SNORD30; small nucleolar RNA SNORD30
D 132009503 small nucleolar RNA SNORD31 K14893 SNORD31; small nucleolar RNA SNORD31
D 132012751 small nucleolar RNA SNORD37 K27210 SNORD37; small nucleolar RNA SNORD37
D 132004608 small nucleolar RNA SNORD42 K14892 SNORD42; small nucleolar RNA SNORD42
D 132002374 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45
D 132002376 small nucleolar RNA SNORD45 K26302 SNORD45; small nucleolar RNA SNORD45
D 132002373 small nucleolar RNA SNORD46 K14889 SNORD46; small nucleolar RNA SNORD46
D 132026341 small nucleolar RNA SNORD47 K14920 SNORD47; small nucleolar RNA SNORD47
D 132004615 small nucleolar RNA SNORD49 K26304 SNORD49; small nucleolar RNA SNORD49
D 132014791 small nucleolar RNA SNORD51 K14885 SNORD51; small nucleolar RNA SNORD51
D 132022925 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92
D 132022927 small nucleolar RNA SNORD53/SNORD92 K26306 SNORD53_92; small nucleolar RNA SNORD53/92
D 132024050 small nucleolar RNA SNORD58 K26310 SNORD58; small nucleolar RNA SNORD58
D 132007962 small nucleolar RNA SNORD61 K26311 SNORD61; small nucleolar RNA SNORD61
D 132029011 small nucleolar RNA SNORD63 K27111 SNORD63; small nucleolar RNA SNORD63
D 132000545 small nucleolar RNA SNORD64 K27112 SNORD64; small nucleolar RNA SNORD64
D 132004631 small nucleolar RNA SNORD65 K14903 SNORD65; small nucleolar RNA SNORD65
D 132012755 small nucleolar RNA SNORD66 K27211 SNORD66; small nucleolar RNA SNORD66
D 132008282 small nucleolar RNA SNORD67 K27212 SNORD67; small nucleolar RNA SNORD67
D 132006235 small nucleolar RNA MBII-202 K27213 SNORD68; small nucleolar RNA SNORD68
D 132012757 small nucleolar RNA SNORD69 K27214 SNORD69; small nucleolar RNA SNORD69
D 132014805 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70
D 132014806 small nucleolar RNA SNORD70 K27215 SNORD70; small nucleolar RNA SNORD70
D 132006243 small nucleolar RNA SNORD71 K27216 SNORD71; small nucleolar RNA SNORD71
D 132029026 small nucleolar RNA SNORD72 K27181 SNORD72; small nucleolar RNA SNORD72
D 132009497 small nucleolar RNA SNORD73 K27208 SNORD73; small nucleolar RNA SNORD73
D 132009498 small nucleolar RNA SNORD73 K27208 SNORD73; small nucleolar RNA SNORD73
D 132026342 small nucleolar RNA SNORD74 K14890 SNORD74; small nucleolar RNA SNORD74
D 132026352 small nucleolar RNA SNORD78 K26313 SNORD78; small nucleolar RNA SNORD78
D 132026339 small nucleolar RNA SNORD79 K26314 SNORD79; small nucleolar RNA SNORD79
D 132014787 small nucleolar RNA SNORD82 K27133 SNORD82; small nucleolar RNA SNORD82
D 132021042 small nucleolar RNA U83B K27134 SNORD83; small nucleolar RNA SNORD83
D 132008184 small nucleolar RNA SNORD86 K27176 SNORD86; small nucleolar RNA SNORD86
D 132014797 small nucleolar RNA SNORD87 K27177 SNORD87 U87; small nucleolar RNA SNORD87
D 132022936 small nucleolar RNA SNORD89 K27178 SNORD89; small nucleolar RNA SNORD89
D 132004633 small nucleolar RNA SNORD91 family K27113 SNORD91; small nucleolar RNA SNORD91
D 132004632 small nucleolar RNA SNORD91 family K27113 SNORD91; small nucleolar RNA SNORD91
D 132017086 small nucleolar RNA SNORD93 K27114 SNORD93; small nucleolar RNA SNORD93
D 132022943 small nucleolar RNA SNORD94 K27115 SNORD94; small nucleolar RNA SNORD94
D 132029015 small nucleolar RNA SNORD95 K27116 SNORD95; small nucleolar RNA SNORD95
D 132029005 small nucleolar RNA SNORD96 family K27117 SNORD96; small nucleolar RNA SNORD96
D 132009558 small nucleolar RNA SNORD97 K27118 SNORD97; small nucleolar RNA SNORD97
D 132017087 small nucleolar RNA SNORD98 K27119 SNORD98; small nucleolar RNA SNORD98
D 132002387 small nucleolar RNA SNORD99 K27120 SNORD99; small nucleolar RNA SNORD99
D 132018901 small nucleolar RNA SNORD100 K27121 SNORD100; small nucleolar RNA SNORD100
D 132018885 small nucleolar RNA SNORD101 K27122 SNORD101; small nucleolar RNA SNORD101
D 132003054 small nucleolar RNA SNORD102 K27123 SNORD102; small nucleolar RNA SNORD102
D 132002365 small nucleolar RNA SNORD103/SNORD85 K27124 SNORD103; small nucleolar RNA SNORD103
D 132002367 small nucleolar RNA SNORD103/SNORD85 K27124 SNORD103; small nucleolar RNA SNORD103
D 132012758 small nucleolar RNA SNORD105 K27125 SNORD105; small nucleolar RNA SNORD105
D 132012760 small nucleolar RNA U105B K27125 SNORD105; small nucleolar RNA SNORD105
D 132000550 small nucleolar RNA SNORD107 K27126 SNORD107; small nucleolar RNA SNORD107
D 132000555 small nucleolar RNA SNORD109A K27128 SNORD109; small nucleolar RNA SNORD109
D 132008185 small nucleolar RNA SNORD110 K27129 SNORD110; small nucleolar RNA SNORD110
D 132006249 small nucleolar RNA SNORD111 K27130 SNORD111; small nucleolar RNA SNORD111
D 132006248 small nucleolar RNA SNORD111 K27130 SNORD111; small nucleolar RNA SNORD111
D 132000552 small nucleolar RNA SNORD112 K27131 SNORD112; small nucleolar RNA SNORD112
D 132000524 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000495 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000497 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000485 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000475 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000490 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000480 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000492 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000522 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000486 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000484 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000507 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000477 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000512 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000514 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000479 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000487 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000481 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000478 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000476 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000513 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132000488 small nucleolar RNA SNORD113/SNORD114 family K27132 SNORD113_114; small nucleolar RNA SNORD113/114
D 132008936 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 132017063 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 132008937 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 132000468 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 132008935 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 132000469 small nucleolar RNA SNORD116 K27135 SNORD116; small nucleolar RNA SNORD116
D 132018881 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117
D 132018883 small nucleolar RNA SNORD83 K27136 SNORD117; small nucleolar RNA SNORD117
D 132025276 small nucleolar RNA SNORD121A K27137 SNORD121; small nucleolar RNA SNORD121
D 132025275 small nucleolar RNA SNORD121A K27137 SNORD121; small nucleolar RNA SNORD121
D 132029028 small nucleolar RNA SNORD123 K27138 SNORD123; small nucleolar RNA SNORD123
D 132004640 small nucleolar RNA SNORD124 K27139 SNORD124; small nucleolar RNA SNORD124
D 132024064 small nucleolar RNA SNORD125 K27140 SNORD125; small nucleolar RNA SNORD125
D 132000551 small nucleolar RNA SNORD126 K27141 SNORD126; small nucleolar RNA SNORD126
D 132000553 small nucleolar RNA SNORD127 K27142 SNORD127; small nucleolar RNA SNORD127
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
D 132002353 small nucleolar RNA SNORA73 family K14908 SNORA73; small nucleolar RNA SNORA73
D 132007972 small nucleolar RNA SNORA11 K14925 SNORA11; small nucleolar RNA SNORA11
D 132000549 small nucleolar RNA SNORA11 K14925 SNORA11; small nucleolar RNA SNORA11
D 132002368 small nucleolar RNA SNORA16B/SNORA16A family K14927 SNORA16; small nucleolar RNA SNORA16
D 132004635 small nucleolar RNA SNORA76 K14928 SNORA50_76; small nucleolar RNA SNORA50/76
D 132006238 small nucleolar RNA SNORA50 K14928 SNORA50_76; small nucleolar RNA SNORA50/76
D 132021039 small nucleolar RNA SNORA53 K14929 SNORA53; small nucleolar RNA SNORA53
D 132024062 small nucleolar RNA SNORA77 K14935 SNORA77; small nucleolar RNA SNORA77
D 132000548 small nucleolar RNA SNORA79 K26319 SNORA79; small nucleolar RNA SNORA79
C SnoRNAs act as guides for pseudouridynation
D 132009531 small nucleolar RNA SNORA1 K14918 SNORA1; small nucleolar RNA SNORA1
D 132021031 small nucleolar RNA SNORA2/SNORA34 family K14922 SNORA2_34; small nucleolar RNA SNORA2/34
D 132012728 small nucleolar RNA SNORA62/SNORA6 family K14910 SNORA6_62; small nucleolar RNA SNORA6/62
D 132012749 small nucleolar RNA SNORA7 K26322 SNORA7; small nucleolar RNA SNORA7
D 132012742 small nucleolar RNA SNORA8 K26323 SNORA8; small nucleolar RNA SNORA8
D 132029019 small nucleolar RNA SNORA13 K14930 SNORA13; small nucleolar RNA SNORA13
D 132017073 small nucleolar RNA SNORA14 K14916 SNORA14; small nucleolar RNA SNORA14
D 132006236 small nucleolar RNA SNORA15 K26325 SNORA15; small nucleolar RNA SNORA15
D 132014795 small nucleolar RNA SNORA43 K26326 SNORA17_43; small nucleolar RNA SNORA17/43
D 132000543 small nucleolar RNA SNORA17 K26326 SNORA17_43; small nucleolar RNA SNORA17/43
D 132025271 small nucleolar RNA SNORA17 K26326 SNORA17_43; small nucleolar RNA SNORA17/43
D 132002381 small nucleolar RNA SNORA18 K26327 SNORA18; small nucleolar RNA SNORA18
D 132021036 small nucleolar RNA SNORA18 K26327 SNORA18; small nucleolar RNA SNORA18
D 132027348 small nucleolar RNA SNORA22 K26329 SNORA22; small nucleolar RNA SNORA22
D 132009521 small nucleolar RNA SNORA23 K26330 SNORA23; small nucleolar RNA SNORA23
D 132003061 small nucleolar RNA SNORA27 K26333 SNORA27; small nucleolar RNA SNORA27
D 132000534 small nucleolar RNA SNORA31 K26336 SNORA31; small nucleolar RNA SNORA31
D 132003062 small nucleolar RNA SNORA40 K14926 SNORA40; small nucleolar RNA SNORA40
D 132014804 small nucleolar RNA SNORA40 K14926 SNORA40; small nucleolar RNA SNORA40
D 132018898 small nucleolar RNA SNORA40 K14926 SNORA40; small nucleolar RNA SNORA40
D 132009548 small nucleolar RNA SNORA40 K14926 SNORA40; small nucleolar RNA SNORA40
D 132002378 small nucleolar RNA SNORA44 K26340 SNORA44; small nucleolar RNA SNORA44
D 132029033 small nucleolar RNA SNORA47 K27149 SNORA47; small nucleolar RNA SNORA47
D 132004630 small nucleolar RNA SNORA48 K26342 SNORA48; small nucleolar RNA SNORA48
D 132004629 small nucleolar RNA SNORA48 K26342 SNORA48; small nucleolar RNA SNORA48
D 132009534 small nucleolar RNA SNORA52 K14911 SNORA52; small nucleolar RNA SNORA52
D 132002382 small nucleolar RNA SNORA55 K27150 SNORA55; small nucleolar RNA SNORA55
D 132022915 small nucleolar RNA SNORA71 K26344 SNORA60_71; small nucleolar RNA SNORA60/71
D 132022914 small nucleolar RNA SNORA71 K26344 SNORA60_71; small nucleolar RNA SNORA60/71
D 132002361 small nucleolar RNA SNORA70 K14879 SNORA70; small nucleolar RNA SNORA70
D 132014783 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72
D 132009509 small nucleolar RNA SNORA72 K26362 SNORA72; small nucleolar RNA SNORA72
D 132025278 small nucleolar RNA SNORA84 K27151 SNORA84; small nucleolar RNA SNORA84
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024