+F Repair protein KO
#
DNA Repair and Recombination Proteins - Morus notabilis
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 21393912 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 21388198 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 112093873 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 21393177 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 21410634 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 21389023 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 21387359 methyl-CpG-binding domain protein 4-like protein isoform X1 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 21396550 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 21407453 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 21407472 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 21389840 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 21409321 DNA-(apurinic or apyrimidinic site) lyase 2 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 112095305 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 21403563 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 21391287 DNA polymerase delta small subunit isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
F 21384550 uncharacterized protein LOC21384550 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
F 21386201 uncharacterized protein LOC21386201 K03504 POLD3; DNA polymerase delta subunit 3
F 21402579 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 21392351 DNA polymerase epsilon catalytic subunit A K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 21407831 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 21405152 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 21385458 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 21404911 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 21405480 flap endonuclease 1 isoform X2 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 21403526 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 21402393 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 21397935 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 21395270 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 21387846 polynucleotide 3'-phosphatase ZDP isoform X1 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 21388674 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 21393094 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 21394370 poly [ADP-ribose] polymerase 2 isoform X2 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 21405178 poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 21409815 DNA repair protein RAD4 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 21387912 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
F 21392003 ubiquitin receptor RAD23d K10839 RAD23; UV excision repair protein RAD23
F 21392005 ubiquitin receptor RAD23d K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 21410023 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 21404503 cullin-4 K10609 CUL4; cullin 4
F 21393240 DNA damage-binding protein 1 isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 21404847 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 21409999 uncharacterized protein LOC21409999 K15082 RAD7; DNA repair protein RAD7
F 21395176 DNA repair protein RAD16 isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 21409262 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 21397658 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 21410072 DNA-directed RNA polymerases II, IV and V subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 21400928 DNA-directed RNA polymerases IV and V subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 21391700 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 21387177 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 21388704 DNA-directed RNA polymerase V subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 21397676 DNA-directed RNA polymerases II, IV and V subunit 6A K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 21408022 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 21403037 DNA-directed RNA polymerases II and V subunit 8A K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 21391178 DNA-directed RNA polymerases II and V subunit 8A K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 112091205 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 21391118 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 21390428 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 21387719 DNA-directed RNA polymerases II, IV and V subunit 11 K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 21407405 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 21410023 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 21404503 cullin-4 K10609 CUL4; cullin 4
F 21393240 DNA damage-binding protein 1 isoform X1 K10610 DDB1; DNA damage-binding protein 1
F 21385274 DNA excision repair protein ERCC-8 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 21389104 protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 21400547 UV-stimulated scaffold protein A homolog K23720 UVSSA; UV-stimulated scaffold protein A
F 21394685 transcription elongation factor 1 homolog isoform X1 K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 21406990 general transcription and DNA repair factor IIH helicase subunit XPB1 K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 21407776 general transcription and DNA repair factor IIH helicase subunit XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 21406503 general transcription and DNA repair factor IIH subunit TFB1-1 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 21397548 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 21403094 general transcription and DNA repair factor IIH subunit TFB4 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 21395325 general transcription and DNA repair factor IIH subunit TFB2 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 21405974 general transcription and DNA repair factor IIH subunit TFB5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 21388634 cyclin-dependent kinase D-3 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 21409806 cyclin-H1-1 K06634 CCNH; cyclin H
E 112094428 LOW QUALITY PROTEIN: uncharacterized protein LOC112094428 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 21410755 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 112090334 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 21390529 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 21396051 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 21387928 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 112091086 replication protein A 14 kDa subunit B-like isoform X1 K10740 RPA3; replication factor A3
D Other NER factors
E 21387235 DNA excision repair protein ERCC-1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 21406159 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 112094535 DNA repair protein UVH3 K10846 ERCC5; DNA excision repair protein ERCC-5
E 21385694 flap endonuclease GEN-like 1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 21403526 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 21408942 MMS19 nucleotide excision repair protein homolog K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 21389955 cullin-3A K03869 CUL3; cullin 3
E 21389956 cullin-3A K03869 CUL3; cullin 3
E 21408026 elongin-C K03872 ELOC; elongin-C
E 21391852 uncharacterized protein LOC21391852 K03873 ELOB; elongin-B
E 21391853 uncharacterized protein LOC21391853 isoform X1 K03873 ELOB; elongin-B
E 112092188 uncharacterized protein LOC112092188 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 21405122 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 21398856 DNA mismatch repair protein MSH3 isoform X1 K08736 MSH3; DNA mismatch repair protein MSH3
E 21393076 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
E 21403705 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 21387418 DNA mismatch repair protein MLH1 K08734 MLH1; DNA mismatch repair protein MLH1
E 21384726 DNA mismatch repair protein PMS1 K10858 PMS2; DNA mismatch repair protein PMS2
E 21390481 DNA mismatch repair protein MLH3 isoform X1 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 112095305 DNA polymerase delta catalytic subunit-like K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 21403563 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 21391287 DNA polymerase delta small subunit isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
E 21384550 uncharacterized protein LOC21384550 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
E 21386201 uncharacterized protein LOC21386201 K03504 POLD3; DNA polymerase delta subunit 3
E 21402579 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 21410755 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 112090334 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 21390529 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 21396051 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 21387928 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 112091086 replication protein A 14 kDa subunit B-like isoform X1 K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 21394655 replication factor C subunit 1 isoform X1 K10754 RFC1; replication factor C subunit 1
E 21393850 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 21396557 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 21396544 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 21384034 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 21391900 uncharacterized protein LOC21391900 K10756 RFC3_5; replication factor C subunit 3/5
E 21392962 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 21406609 uncharacterized protein LOC21406609 K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 21385458 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 21404911 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 21398708 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 21400401 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 21403526 DNA ligase 1 isoform X1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 21401884 LOW QUALITY PROTEIN: DNA damage-binding protein CMR1 K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 21401703 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 21409478 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 21407869 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA1-core complex
E 21398988 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 21389392 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 21402696 protein BREAST CANCER SUSCEPTIBILITY 1 homolog K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 21402467 uncharacterized protein LOC21402467 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 21399130 BRISC and BRCA1-A complex member 2 isoform X2 K12173 BRE; BRCA1-A complex subunit BRE
E 21385482 lys-63-specific deubiquitinase BRCC36 isoform X1 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 21407586 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 21396576 DNA topoisomerase 2-binding protein 1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 21385497 BRCT domain-containing protein At4g02110 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 21401703 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 21409478 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 21407869 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA complex
E 21392813 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B K08775 BRCA2; breast cancer 2 susceptibility protein
E 21402505 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 21402505 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 21394463 DNA repair protein RAD51 homolog 2 K10869 RAD51L1; RAD51-like protein 1
E 21408273 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 21394137 DNA repair protein RAD51 homolog 4 K10871 RAD51L3; RAD51-like protein 3
E 21406900 DNA repair protein XRCC2 homolog isoform X5 K10879 XRCC2; DNA-repair protein XRCC2
E 21384392 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 21395855 DNA repair RAD52-like protein 1, mitochondrial K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 21388192 DNA repair RAD52-like protein 2, chloroplastic K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 21407475 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 21410039 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 21410157 protein CHROMATIN REMODELING 25 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 21384300 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 21390362 SNF2 domain-containing protein CLASSY 1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 21391485 protein CHROMATIN REMODELING 35 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 21406140 SNF2 domain-containing protein CLASSY 3 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 21389528 mediator of RNA polymerase II transcription subunit 34 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 21404601 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 21386406 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 21386438 ATP-dependent DNA helicase Q-like SIM isoform X1 K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 21399756 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 21410033 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 21390157 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 21399756 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 21410033 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 21388432 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 21402836 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 21393444 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 21392348 recQ-mediated genome instability protein 2 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 21410755 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 112090334 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 21390529 replication protein A 70 kDa DNA-binding subunit B K07466 RFA1; replication factor A1
E 21396051 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 21387928 replication protein A 32 kDa subunit A isoform X1 K10739 RFA2; replication factor A2
E 112091086 replication protein A 14 kDa subunit B-like isoform X1 K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 21397186 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 21402634 serine/threonine-protein phosphatase 4 regulatory subunit 2 K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 21391121 serine/threonine-protein phosphatase 4 regulatory subunit 3B K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 21396233 uncharacterized protein LOC21396233 K19022 AP5B1; AP-5 complex subunit beta-1
E 21394565 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 21385785 AP-5 complex subunit zeta-1 isoform X1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 21391328 structural maintenance of chromosomes protein 5 K22803 SMC5; structural maintenance of chromosomes protein 5
E 21390059 structural maintenance of chromosomes protein 6B K22804 SMC6; structural maintenance of chromosomes protein 6
E 112091113 non-structural maintenance of chromosomes element 1 homolog isoform X1 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 21395388 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 21400996 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 21390140 crossover junction endonuclease EME1B K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 21391975 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 21394214 protein DELETION OF SUV3 SUPPRESSOR 1(I) K10881 SHFM1; 26 proteasome complex subunit DSS1
E 21393980 uncharacterized protein LOC21393980 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 112095210 uncharacterized protein LOC112095210 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 21385039 structure-specific endonuclease subunit slx1 isoform X1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 21398855 flap endonuclease GEN-like 2 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 21402259 flap endonuclease GEN-like 1 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 21389540 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 21400717 uncharacterized protein LOC21400717 isoform X1 K19026 SPG11; spatacsin
E 21398035 uncharacterized protein LOC21398035 isoform X1 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 21392631 protein MRG1 K11339 MORF4L1; mortality factor 4-like protein 1
E 112092296 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 112094532 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 21394048 ATPase family AAA domain-containing protein FIGL1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 21394762 zinc finger SWIM domain-containing protein 7 isoform X1 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 21387355 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 21407367 alpha-N-acetylglucosaminidase K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 21401214 uncharacterized protein LOC21401214 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 112091579 single-stranded DNA-binding protein WHY1, chloroplastic-like K26559 WHY1; single-stranded DNA-binding protein WHY1
E 21395849 single-stranded DNA-binding protein WHY2, mitochondrial K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 21395246 ATP-dependent DNA helicase 2 subunit KU70 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 21392932 ATP-dependent DNA helicase 2 subunit KU80 isoform X1 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 21401703 double-strand break repair protein MRE11 K10865 MRE11; double-strand break repair protein MRE11
E 21409478 DNA repair protein RAD50 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 21389092 DNA ligase 4 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 21399413 DNA repair protein XRCC4 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 21388674 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 21395270 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 112093891 uncharacterized protein LOC112093891 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 21383760 uncharacterized protein LOC21383760 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 21401023 uncharacterized protein LOC21401023 isoform X1 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 21395118 uncharacterized protein LOC21395118 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 21391158 E3 ubiquitin-protein ligase FANCL isoform X1 K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 21386312 DEAD-box ATP-dependent RNA helicase FANCM K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 21387481 protein MHF1 homolog K11511 APITD1; centromere protein S
E 21401899 protein MHF2 homolog K15360 STRA13; centromere protein X
E 21403686 uncharacterized protein LOC21403686 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 21399756 ATP-dependent DNA helicase Q-like 4A K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 21410033 ATP-dependent DNA helicase Q-like 3 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 21388432 DNA topoisomerase 3-alpha K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 21402836 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 21393444 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 21392348 recQ-mediated genome instability protein 2 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 21400702 Fanconi anemia group D2 protein homolog K10891 FANCD2; fanconi anemia group D2 protein
E 21390617 Fanconi anemia group I protein homolog isoform X1 K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 21392813 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B K08775 BRCA2; breast cancer 2 susceptibility protein
E 21407586 Fanconi anemia group J protein homolog K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 21399694 fanconi-associated nuclease 1 homolog isoform X1 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 21402505 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 21408273 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 21391552 telomere length regulation protein TEL2 homolog isoform X1 K11137 TELO2; telomere length regulation protein
E 21393541 WD repeat-containing protein 48 isoform X1 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 21405849 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 21408690 serine/threonine-protein phosphatase 6 regulatory subunit 3 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
E 21391441 serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1 K15501 PPP6R3; serine/threonine-protein phosphatase 6 regulatory subunit 3
D Ubiquitin ligases
D Others
E 21389826 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 21398973 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
E 21401884 LOW QUALITY PROTEIN: DNA damage-binding protein CMR1 K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 21387392 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 21387200 DNA polymerase kappa K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 21409668 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 21384891 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
D 21390103 DNA polymerase zeta catalytic subunit K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 21403966 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 21391021 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 21397255 DNA repair protein RAD5A K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 21391518 DNA repair protein RAD5B K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 21388126 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 112092748 ubiquitin-conjugating enzyme E2 variant 1B-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 112094333 ubiquitin-conjugating enzyme E2 variant 1A K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 21401811 ubiquitin-conjugating enzyme E2 variant 1D isoform X1 K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 21401631 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 21388301 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 21385458 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 21404911 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 21394107 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 21384715 uncharacterized protein LOC21384715 K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 21400754 uncharacterized protein LOC21400754 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 21409297 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 21393850 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 21396557 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 21396544 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 21384034 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 21391900 uncharacterized protein LOC21391900 K10756 RFC3_5; replication factor C subunit 3/5
D 21392962 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 21406609 uncharacterized protein LOC21406609 K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 21400754 uncharacterized protein LOC21400754 isoform X1 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 21394741 uncharacterized protein LOC21394741 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 21398106 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 21391552 telomere length regulation protein TEL2 homolog isoform X1 K11137 TELO2; telomere length regulation protein
D 21399286 uncharacterized protein LOC21399286 isoform X1 K20403 TTI1; TELO2-interacting protein 1
D 21389965 uncharacterized protein At2g39910 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 21397272 Golgi to ER traffic protein 4 homolog isoform X1 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 21389523 serine/threonine-protein kinase ATR K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 21398136 LOW QUALITY PROTEIN: serine/threonine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 112092168 14-3-3-like protein D isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 21395938 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 112092971 14-3-3-like protein A K06630 YWHAE; 14-3-3 protein epsilon
D 21384884 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 21400181 14-3-3-like protein F K06630 YWHAE; 14-3-3 protein epsilon
D 21389243 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 21390084 14-3-3-like protein GF14 iota K06630 YWHAE; 14-3-3 protein epsilon
D 21391912 14-3-3-like protein GF14 kappa isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 21392415 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 21406327 uncharacterized protein LOC21406327 K20780 MDC1; mediator of DNA damage checkpoint protein 1
D 21407331 serine/threonine-protein kinase Nek1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 21399051 serine/threonine-protein kinase Nek6 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 21385349 serine/threonine-protein kinase Nek5 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 21385923 serine/threonine-protein kinase Nek2 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 21389866 protein downstream neighbor of son homolog K22422 DONSON; protein downstream neighbor of Son
D 21401299 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 21405185 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 21400570 replication stress response regulator SDE2 K25059 SDE2; replication stress response regulator SDE2
D 21402333 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 21402822 helicase and polymerase-containing protein TEBICHI K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 21397924 DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 21387670 LOW QUALITY PROTEIN: DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 21397373 DNA-directed primase/polymerase protein K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 21401593 LOW QUALITY PROTEIN: DNA cross-link repair 1A protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D 21392955 LOW QUALITY PROTEIN: 5' exonuclease Apollo K15340 DCLRE1A; DNA cross-link repair 1A protein
D 21405043 5' exonuclease Apollo K15341 DCLRE1B; DNA cross-link repair 1B protein [EC:3.1.-.-]
D 21397553 exonuclease V, chloroplastic K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 21398027 endonuclease V K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 21398352 DNA annealing helicase and endonuclease ZRANB3 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 21398527 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 21389812 endonuclease 1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 21389813 endonuclease 4 isoform X1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 21393626 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 21389166 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 21407254 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 21400408 pre-mRNA-splicing factor SPF27 homolog K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 21406267 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 21408514 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 21404046 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 21390131 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 21393349 ribonucleoside-diphosphate reductase small chain A isoform X1 K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 21394060 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 112093873 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 21393177 uracil-DNA glycosylase, mitochondrial K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 21403226 DNA-3-methyladenine glycosylase 1 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 21392378 uncharacterized protein LOC21392378 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 21410634 DNA-3-methyladenine glycosylase isoform X1 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 21389023 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 21394778 uncharacterized protein LOC21394778 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 21409147 uncharacterized protein LOC21409147 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 21396688 uncharacterized protein LOC21396688 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 21386424 uncharacterized protein LOC21386424 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 21402163 uncharacterized protein LOC21402163 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 21404071 uncharacterized protein LOC21404071 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 21408421 formamidopyrimidine-DNA glycosylase isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 21407453 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 21407472 endonuclease III homolog 1, chloroplastic K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 21389840 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 21398595 DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1 K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D RecJ
D DNA ligase
D DNA polymerase I
E 21400795 DNA polymerase I B, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 21400795 DNA polymerase I B, chloroplastic/mitochondrial K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
F 24286604 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
F 24286602 rpoC2; RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 24286603 rpoC1; RNA polymerase beta K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
F 24286659 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 21397669 LOW QUALITY PROTEIN: uncharacterized protein LOC21397669 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 21405102 uncharacterized protein LOC21405102 K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 21394592 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 112090327 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 21394592 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
E 112090327 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 21408962 uncharacterized protein LOC21408962 K04485 radA; DNA repair protein RadA/Sms
E 21400355 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 21403158 DNA gyrase subunit A, chloroplastic/mitochondrial K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 21386704 DNA gyrase subunit B, chloroplastic/mitochondrial K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 21405498 LOW QUALITY PROTEIN: uncharacterized protein LOC21405498 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 21394592 DNA repair protein recA homolog 1, chloroplastic K03553 recA; recombination protein RecA
D 112090327 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D 21405102 uncharacterized protein LOC21405102 K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 21408514 nudix hydrolase 1 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D 21404046 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024