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Transcription Machinery - Methanolobus psychrophilus
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
D Pol II specific subunits
D Pol I, II, III common subunits
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
D TFIIB
E Mpsy_0890 tfb; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E Mpsy_1517 TATA box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E Mpsy_2313 TATA-box-binding family protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIE
E Mpsy_2883 transcription factor IIE (TFIIE), alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFIIF
D TFIIH
E Mpsy_1932 Rad3-related DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C Mediator complex
D Head
D Middle
D Tail
D CDK-module
D Other mediators
C Coactivators
D SAGA/TFTC/STAGA complex
D BAF/PBAF complex
D SWI/SNF complex
D RSC complex
D Others
C Other transcription-related factors
D Transcription elongation factors
E Mpsy_0972 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
E Mpsy_1497 nusG; transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5
D Transcription termination factor
D PAF1 complex
D NELF complex
D Super elongation complex (SEC)
D Little elongation complex (LEC)
D Brd4/P-TEFb complex
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
D DBIRD complex
D Others
B RNA polymerase III system
C RNA polymerase III
D Core subunits
D Pol III specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D TFIIIA
D TFIIIB
E Mpsy_1517 TATA box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E Mpsy_2313 TATA-box-binding family protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D TFIIIC
D TFIIIC, fungi type
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
D Octamer transcription factors
D Others
B RNA polymerase I system
C RNA polymerase I
D Core subunits
D Pol I specific subunits
D Pol I, II, III common subunits
C Basal transcription factors
D SL1/TIF-1B
E Mpsy_1517 TATA box binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E Mpsy_2313 TATA-box-binding family protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
C Other transcription-related factors
D UBF
D Transcription initiation factors
D Transcription elongation factors
E Mpsy_0972 DNA-directed RNA polymerase, subunit E'' K15171 SUPT4H1; transcription elongation factor SPT4
E Mpsy_1497 nusG; transcription antitermination protein NusG K15172 SUPT5H; transcription elongation factor SPT5
D NoRC (nucleolar remodeling complex)
D CTDK-I complex
D Transcription termination factors
D Others
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AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
E Mpsy_1011 nusA; transcription elongation factor NusA-like protein K02600 nusA; transcription termination/antitermination protein NusA
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
E Mpsy_1008 DNA-directed RNA polymerase subunit alpha K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
E Mpsy_1009 DNA-directed RNA polymerase subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
E Mpsy_1007 DNA-directed RNA polymerase, subunit B' K03044 rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
E Mpsy_1006 DNA-directed RNA polymerase subunit beta'' K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
E Mpsy_1111 DNA-directed RNA polymerase subunit D K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
E Mpsy_0971 DNA-directed RNA polymerase subunit E' K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
E Mpsy_2774 DNA-directed RNA polymerase, subunit F K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
E Mpsy_1005 DNA-directed RNA polymerase, subunit H K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
E Mpsy_0880 DNA-directed RNA polymerase, subunit K K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
E Mpsy_2113 RNA polymerase dimerization K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
E Mpsy_0879 DNA-directed RNA polymerase subunit N K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
E Mpsy_2732 DNA-directed RNA polymerase subunit P K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C Basal transcription factors
D TFB
E Mpsy_0890 tfb; transcription initiation factor IIB K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E Mpsy_2883 transcription factor IIE (TFIIE), alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
E Mpsy_2331 DNA-directed RNA polymerase, subunit M K03057 tfs; transcription factor S
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024