+E Transcription factors KO #

  Transcription Factors - Micromonospora sagamiensis

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D GCM10017556_37580 restriction endonuclease subunit M K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GCM10017556_23610 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GCM10017556_23920 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D GCM10017556_27820 AraC family transcriptional regulator K13653 K13653; AraC family transcriptional regulator D GCM10017556_16290 DNA-3-methyladenine glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D GCM10017556_38070 ftrA; transcriptional activator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA C LysR family D GCM10017556_33720 putative transcriptional regulator, LysR family protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor C DeoR family D GCM10017556_20360 transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor C LacI family D GCM10017556_04100 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GCM10017556_53180 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GCM10017556_56730 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GCM10017556_57360 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GCM10017556_57830 lacI; LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GCM10017556_57910 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GCM10017556_13150 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG C GntR family D GCM10017556_53520 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D GCM10017556_45200 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D GCM10017556_47880 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D GCM10017556_49060 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D GCM10017556_51530 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D GCM10017556_51820 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D GCM10017556_18070 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D GCM10017556_27780 hypothetical protein K03710 K03710; GntR family transcriptional regulator D GCM10017556_27790 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D GCM10017556_56880 hypothetical protein K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor C TetR/AcrR family D GCM10017556_51300 hypothetical protein K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness D GCM10017556_51160 TetR family transcriptional regulator K18937 lfrR; TetR/AcrR family transcriptional regulator, repressor for lfrA D GCM10017556_05090 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase C Lrp/AsnC family D GCM10017556_10280 asnC; AsnC family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D GCM10017556_29220 lrp; AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GCM10017556_12310 lrp; AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GCM10017556_54680 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D GCM10017556_09670 transcriptional regulator K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family D GCM10017556_06710 putative transcriptional regulator, MarR family protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D GCM10017556_24770 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D GCM10017556_27310 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D GCM10017556_07770 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D GCM10017556_36390 tipA; HTH-type transcriptional activator TipA K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D GCM10017556_13230 cobalamin-binding protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D GCM10017556_28220 transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D GCM10017556_10800 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D GCM10017556_49460 fur; transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D GCM10017556_19560 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D GCM10017556_32490 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D GCM10017556_01580 fur; transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator C IclR family D GCM10017556_53360 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor C CRP/FNR family D GCM10017556_07580 cAMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GCM10017556_10110 transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D GCM10017556_21540 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family D GCM10017556_43360 nsrR; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D GCM10017556_04070 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D GCM10017556_27500 putative transcriptional regulator, ArsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D GCM10017556_28160 arsR; transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D GCM10017556_28190 hypothetical protein K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D GCM10017556_10790 hypothetical protein K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D GCM10017556_58610 XRE family transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D GCM10017556_40660 transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator C PadR family D GCM10017556_03120 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D GCM10017556_33360 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D GCM10017556_34540 padR; PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D GCM10017556_37880 hypothetical protein K10947 K10947; PadR family transcriptional regulator D GCM10017556_45370 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D GCM10017556_46130 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D GCM10017556_18960 hypothetical protein K10947 K10947; PadR family transcriptional regulator D GCM10017556_19180 hypothetical protein K10947 K10947; PadR family transcriptional regulator C Other families D GCM10017556_41200 iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D GCM10017556_04420 RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D GCM10017556_33900 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D GCM10017556_19020 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor D GCM10017556_27860 XRE family transcriptional regulator K27097 espR; ESX-1-secreted protein regulator D GCM10017556_45260 hypothetical protein K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D GCM10017556_35240 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D GCM10017556_14960 whiB; transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D GCM10017556_15120 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D GCM10017556_16790 whiD; transcriptional regulator WhiD K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D GCM10017556_21740 whiB; transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D GCM10017556_15380 whiB; transcriptional regulator WhiB K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D GCM10017556_31240 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D GCM10017556_04330 pucR; CdaR family transcriptional regulator K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D GCM10017556_26070 parB; chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GCM10017556_20860 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D GCM10017556_47300 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D GCM10017556_11120 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D GCM10017556_20980 amino acid-binding protein K03567 gcvR; glycine cleavage system transcriptional repressor D GCM10017556_32010 paaX; PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D GCM10017556_50980 paaX; PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D GCM10017556_16710 hypothetical protein K03973 pspC; phage shock protein C D GCM10017556_46850 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D GCM10017556_29120 hypothetical protein K07733 alpA; prophage regulatory protein D GCM10017556_50900 hypothetical protein K07733 alpA; prophage regulatory protein D GCM10017556_22290 hypothetical protein K07733 alpA; prophage regulatory protein D GCM10017556_35760 UPF0301 protein K07735 algH; putative transcriptional regulator D GCM10017556_06850 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D GCM10017556_48790 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D GCM10017556_50270 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor D GCM10017556_41150 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D GCM10017556_07040 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0