+D GENES KO
#
KEGG Orthology (KO) - Mycoplasma seminis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:mses00010]
D Q8852_01130 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Q8852_01920 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Q8852_00805 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Q8852_03390 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Q8852_01835 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Q8852_01710 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Q8852_02570 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Q8852_00200 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Q8852_04035 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00020 Citrate cycle (TCA cycle)
C 00030 Pentose phosphate pathway [PATH:mses00030]
D Q8852_01130 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Q8852_01920 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Q8852_03845 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Q8852_01070 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Q8852_04395 phosphoketolase family protein K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22]
D Q8852_02445 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Q8852_04210 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Q8852_03730 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Q8852_00805 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
C 00040 Pentose and glucuronate interconversions
D Q8852_03845 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:mses00051]
D Q8852_00805 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Q8852_03390 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Q8852_01070 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism
C 00053 Ascorbate and aldarate metabolism
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism
D Q8852_01130 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Q8852_01920 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism
D Q8852_01130 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Q8852_01920 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00620 Pyruvate metabolism [PATH:mses00620]
D Q8852_04055 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Q8852_04035 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Q8852_00330 NAD(P)-dependent oxidoreductase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
C 00630 Glyoxylate and dicarboxylate metabolism
D Q8852_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00640 Propanoate metabolism
D Q8852_04055 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00650 Butanoate metabolism
D Q8852_04190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism
D Q8852_03390 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:mses00190]
D Q8852_01895 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Q8852_01905 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Q8852_01900 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Q8852_01890 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Q8852_01910 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Q8852_01875 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Q8852_01885 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Q8852_01880 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Q8852_00540 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:mses00710]
D Q8852_01710 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Q8852_01835 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Q8852_00805 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Q8852_01070 RpiB/LacA/LacB family sugar-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Q8852_03390 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Q8852_03845 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00720 Other carbon fixation pathways [PATH:mses00720]
D Q8852_00740 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Q8852_04055 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:mses00680]
D Q8852_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Q8852_00200 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Q8852_00805 fba; class II fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Q8852_04055 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Q8852_02570 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00910 Nitrogen metabolism
C 00920 Sulfur metabolism
D Q8852_00615 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Q8852_00620 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis
D Q8852_03870 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis
D Q8852_01165 4'-phosphopantetheinyl transferase superfamily protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Q8852_03870 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:mses00561]
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Q8852_03525 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Q8852_00175 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Q8852_01170 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 00564 Glycerophospholipid metabolism [PATH:mses00564]
D Q8852_03860 NAD(P)-binding domain-containing protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Q8852_00175 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Q8852_01170 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Q8852_04145 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Q8852_02065 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Q8852_01060 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:mses00230]
D Q8852_04210 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Q8852_03730 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Q8852_03465 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Q8852_02430 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Q8852_02435 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Q8852_00480 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Q8852_03825 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Q8852_00970 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Q8852_04095 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:mses00240]
D Q8852_01030 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Q8852_00950 cmk; (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Q8852_04390 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Q8852_00970 TIGR00282 family metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Q8852_02440 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Q8852_01090 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Q8852_00995 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:mses00250]
D Q8852_03345 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Q8852_04190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Q8852_04195 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
C 00260 Glycine, serine and threonine metabolism [PATH:mses00260]
D Q8852_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Q8852_02570 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C 00270 Cysteine and methionine metabolism [PATH:mses00270]
D Q8852_02000 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Q8852_03305 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Q8852_00430 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_00700 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02350 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02575 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03040 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03415 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C 00280 Valine, leucine and isoleucine degradation
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis
C 00300 Lysine biosynthesis
C 00310 Lysine degradation
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis
D Q8852_04195 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
C 00330 Arginine and proline metabolism [PATH:mses00330]
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Q8852_04220 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 00340 Histidine metabolism
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism [PATH:mses00380]
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:mses00410]
D Q8852_04190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00430 Taurine and hypotaurine metabolism [PATH:mses00430]
D Q8852_04190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Q8852_04055 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:mses00450]
D Q8852_02200 aminotransferase class V-fold PLP-dependent enzyme K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Q8852_00845 FAD-dependent oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Q8852_01585 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:mses00460]
D Q8852_03345 aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Q8852_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism
D Q8852_04195 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
C 00480 Glutathione metabolism [PATH:mses00480]
D Q8852_03580 M17 family metallopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Q8852_03590 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis
C 00550 Peptidoglycan biosynthesis
C 00552 Teichoic acid biosynthesis
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:mses00730]
D Q8852_00440 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Q8852_03840 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Q8852_04095 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:mses00740]
D Q8852_01020 Cof-type HAD-IIB family hydrolase K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D Q8852_03810 hypothetical protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism
C 00760 Nicotinate and nicotinamide metabolism [PATH:mses00760]
D Q8852_01780 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Q8852_02430 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Q8852_02435 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Q8852_02185 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Q8852_03260 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
C 00770 Pantothenate and CoA biosynthesis [PATH:mses00770]
D Q8852_04150 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Q8852_04050 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Q8852_02310 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Q8852_01165 4'-phosphopantetheinyl transferase superfamily protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis
C 00670 One carbon pool by folate [PATH:mses00670]
D Q8852_00740 bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Q8852_01985 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Q8852_02325 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Q8852_03870 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Q8852_02000 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation
C 00627 Aminobenzoate degradation
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:mses00625]
D Q8852_03795 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:mses03020]
D Q8852_01495 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Q8852_01500 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Q8852_04065 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:mses03010]
D Q8852_01325 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Q8852_03975 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Q8852_02830 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Q8852_03920 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Q8852_02105 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Q8852_00210 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Q8852_03935 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Q8852_00515 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Q8852_04010 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Q8852_04070 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Q8852_00205 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Q8852_04075 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Q8852_03940 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Q8852_03800 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Q8852_00360 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Q8852_03960 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Q8852_02115 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Q8852_03985 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Q8852_02340 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Q8852_01435 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Q8852_03990 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Q8852_04005 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Q8852_04000 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Q8852_03945 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Q8852_03930 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Q8852_01155 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Q8852_03240 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Q8852_01160 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Q8852_01430 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Q8852_00510 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Q8852_03955 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Q8852_03915 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Q8852_03970 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Q8852_04060 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Q8852_03925 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Q8852_00350 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Q8852_01290 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Q8852_00315 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Q8852_03980 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Q8852_03995 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Q8852_03950 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Q8852_00320 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Q8852_00235 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Q8852_03965 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Q8852_02835 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Q8852_01235 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Q8852_03365 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Q8852_04230 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Q8852_00040 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Q8852_01285 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Q8852_04080 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 00970 Aminoacyl-tRNA biosynthesis [PATH:mses00970]
D Q8852_00675 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Q8852_01195 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Q8852_01200 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Q8852_01190 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Q8852_00450 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Q8852_03475 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Q8852_02335 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Q8852_01935 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Q8852_02620 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Q8852_00035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Q8852_00820 class I tRNA ligase family protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Q8852_01585 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Q8852_02325 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Q8852_00735 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Q8852_03270 class I tRNA ligase family protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Q8852_00295 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Q8852_04465 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Q8852_00815 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Q8852_03890 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Q8852_03480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Q8852_01970 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Q8852_01980 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Q8852_04160 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Q8852_02650 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:mses03060]
D Q8852_04100 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D Q8852_03370 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Q8852_01570 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Q8852_03425 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D Q8852_00495 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Q8852_04350 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Q8852_01045 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Q8852_00300 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:mses04122]
D Q8852_00445 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Q8852_00440 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:mses03018]
D Q8852_00200 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Q8852_01575 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Q8852_01715 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Q8852_04020 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Q8852_01125 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:mses03030]
D Q8852_04345 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Q8852_02300 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Q8852_04140 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Q8852_00980 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Q8852_02850 DnaB-like helicase C-terminal domain-containing protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Q8852_03235 DnaB-like helicase C-terminal domain-containing protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Q8852_01940 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Q8852_02110 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_02735 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_00380 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Q8852_01015 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D Q8852_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:mses03410]
D Q8852_01975 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Q8852_02595 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Q8852_04265 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Q8852_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:mses03420]
D Q8852_03625 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D Q8852_03620 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D Q8852_02840 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D Q8852_01755 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Q8852_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:mses03430]
D Q8852_01755 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Q8852_02110 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_02735 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_02300 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Q8852_04140 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Q8852_00980 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Q8852_04345 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Q8852_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Q8852_03295 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:mses03440]
D Q8852_02110 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_02735 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_00990 toprim domain-containing protein K06187 recR; recombination protein RecR
D Q8852_04115 recA; recombinase RecA K03553 recA; recombination protein RecA
D Q8852_01240 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Q8852_01245 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Q8852_04510 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Q8852_02300 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Q8852_04140 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Q8852_00980 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Q8852_04345 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:mses02010]
D Q8852_02160 ABC transporter permease subunit K11070 potC; spermidine/putrescine transport system permease protein
D Q8852_02155 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D Q8852_02150 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Q8852_01605 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Q8852_00550 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D Q8852_00565 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D Q8852_00570 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D Q8852_00560 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Q8852_01470 hypothetical protein K02044 phnD; phosphonate transport system substrate-binding protein
D Q8852_01480 ABC transporter permease subunit K02042 phnE; phosphonate transport system permease protein
D Q8852_01475 ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Q8852_01365 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D Q8852_01655 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D Q8852_01370 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D Q8852_01660 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D Q8852_01375 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Q8852_01665 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Q8852_01670 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Q8852_00365 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D Q8852_00375 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Q8852_00370 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Q8852_03790 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D Q8852_03785 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D Q8852_00400 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Q8852_02385 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Q8852_00405 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Q8852_02380 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Q8852_01075 ATP-binding cassette domain-containing protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS) [PATH:mses02060]
D Q8852_01055 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:mses03070]
D Q8852_03425 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D Q8852_03370 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Q8852_01570 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Q8852_04100 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D Q8852_00495 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Q8852_01045 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Q8852_04350 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Q8852_02785 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:mses02020]
D Q8852_00005 DnaA/Hda family protein K02313 dnaA; chromosomal replication initiator protein
D Q8852_04195 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:mses02024]
D Q8852_04190 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D Q8852_04200 amino acid permease K20265 gadC; glutamate:GABA antiporter
D Q8852_01365 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D Q8852_01655 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D Q8852_01370 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D Q8852_01660 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D Q8852_01375 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Q8852_01665 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Q8852_01670 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Q8852_01075 ATP-binding cassette domain-containing protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Q8852_03425 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D Q8852_03370 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Q8852_01570 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Q8852_04100 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D Q8852_00495 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Q8852_01045 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Q8852_04350 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly
D Q8852_01945 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Q8852_00200 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D Q8852_01365 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D Q8852_01655 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D Q8852_01370 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D Q8852_01660 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D Q8852_01375 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Q8852_01665 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Q8852_01670 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
C 01502 Vancomycin resistance
C 01503 Cationic antimicrobial peptide (CAMP) resistance
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:mses01000]
C 01001 Protein kinases [BR:mses01001]
D Q8852_03835 serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
C 01009 Protein phosphatases and associated proteins [BR:mses01009]
D Q8852_03830 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:mses01002]
D Q8852_00300 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Q8852_04275 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D Q8852_01075 ATP-binding cassette domain-containing protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Q8852_01645 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Q8852_04455 M13 family metallopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D Q8852_03580 M17 family metallopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Q8852_03590 leucyl aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Q8852_04090 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Q8852_04225 M24 family metallopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Q8852_04495 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Q8852_01295 S16 family serine protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Q8852_03275 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Q8852_04220 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
C 01003 Glycosyltransferases
C 01005 Lipopolysaccharide biosynthesis proteins
C 01011 Peptidoglycan biosynthesis and degradation proteins
C 01004 Lipid biosynthesis proteins [BR:mses01004]
D Q8852_03525 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Q8852_00175 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Q8852_01170 lysophospholipid acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases
C 01007 Amino acid related enzymes [BR:mses01007]
D Q8852_00675 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Q8852_04160 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Q8852_02650 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Q8852_00820 class I tRNA ligase family protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Q8852_00815 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Q8852_01585 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Q8852_00295 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Q8852_00735 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Q8852_03270 class I tRNA ligase family protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Q8852_04465 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Q8852_03475 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Q8852_02335 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Q8852_03480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Q8852_01935 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Q8852_00035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Q8852_03890 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Q8852_02620 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Q8852_00450 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Q8852_01970 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Q8852_01980 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:mses00194]
D Q8852_01910 ATP synthase F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Q8852_01905 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Q8852_01900 atpG; ATP synthase F1 subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Q8852_01895 atpA; F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Q8852_01890 atpH; ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Q8852_01885 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Q8852_01880 atpE; ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Q8852_01875 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:mses03000]
D Q8852_00430 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_00700 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02350 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02575 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03040 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03415 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_01115 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Q8852_02490 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:mses03021]
D Q8852_04065 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Q8852_01495 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Q8852_01500 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Q8852_01945 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D Q8852_02210 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D Q8852_03375 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Q8852_00465 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:mses03019]
D Q8852_03520 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Q8852_01715 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Q8852_04020 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Q8852_01575 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Q8852_00200 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Q8852_01125 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
C 03041 Spliceosome
C 03011 Ribosome [BR:mses03011]
D Q8852_01325 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Q8852_03975 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Q8852_02830 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Q8852_03920 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Q8852_02105 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Q8852_00210 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Q8852_03935 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Q8852_00515 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Q8852_04010 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Q8852_04070 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Q8852_00205 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Q8852_04075 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Q8852_03940 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Q8852_03800 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Q8852_00360 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Q8852_03960 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Q8852_02115 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Q8852_03985 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Q8852_02340 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Q8852_01435 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Q8852_03990 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Q8852_04005 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Q8852_04000 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D Q8852_03945 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Q8852_03930 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Q8852_03240 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Q8852_01160 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Q8852_01430 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Q8852_01155 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Q8852_00510 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Q8852_03955 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Q8852_03915 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Q8852_03970 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Q8852_04060 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Q8852_03925 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Q8852_00350 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Q8852_01290 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Q8852_00315 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Q8852_03980 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Q8852_03995 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D Q8852_03950 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Q8852_00320 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Q8852_00235 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Q8852_03965 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Q8852_02835 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Q8852_01235 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Q8852_03365 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Q8852_04230 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D Q8852_00040 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Q8852_01285 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Q8852_04080 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
C 03009 Ribosome biogenesis [BR:mses03009]
D Q8852_03520 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Q8852_01095 era; GTPase Era K03595 era; GTPase
D Q8852_03420 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D Q8852_02210 transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D Q8852_03375 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D Q8852_01135 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Q8852_03545 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Q8852_03175 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Q8852_00505 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Q8852_03735 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Q8852_02495 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Q8852_01005 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Q8852_00825 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Q8852_01820 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Q8852_03170 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Q8852_02180 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Q8852_01185 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Q8852_04355 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Q8852_00455 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Q8852_03840 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Q8852_00955 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D Q8852_01745 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D Q8852_02405 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Q8852_02095 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D Q8852_03445 ribosome assembly cofactor RimP K09748 rimP; ribosome maturation factor RimP
D Q8852_00015 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D Q8852_01085 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D Q8852_03490 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:mses03016]
D Q8852_03890 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Q8852_00295 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Q8852_03270 class I tRNA ligase family protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Q8852_01585 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Q8852_00815 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Q8852_04465 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Q8852_03475 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Q8852_00450 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Q8852_02335 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Q8852_01935 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Q8852_02620 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Q8852_00035 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Q8852_00820 class I tRNA ligase family protein K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Q8852_00735 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Q8852_03480 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Q8852_01970 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Q8852_01980 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Q8852_04160 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Q8852_02650 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Q8852_00100 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Q8852_03190 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Q8852_03820 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Q8852_02405 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Q8852_03555 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Q8852_01825 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Q8852_00045 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Q8852_00675 gltX; glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Q8852_00355 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Q8852_01730 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Q8852_01580 tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D Q8852_01735 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D Q8852_00445 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Q8852_00440 thiI; tRNA uracil 4-sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Q8852_04500 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Q8852_04185 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Q8852_04175 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Q8852_01230 nucleotidyltransferase K27343 tmcAL; tRNAmet cytidine acetate ligase [EC:6.3.1.22]
D Q8852_01575 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
C 03012 Translation factors [BR:mses03012]
D Q8852_03460 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Q8852_01280 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Q8852_01330 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D Q8852_04135 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D Q8852_00215 fusA; elongation factor G K02355 fusA; elongation factor G
D Q8852_03310 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Q8852_01035 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D Q8852_03315 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Q8852_04505 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Q8852_04085 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Q8852_01800 efp; elongation factor P K02356 efp; elongation factor P
C 03110 Chaperones and folding catalysts [BR:mses03110]
D Q8852_03675 AAA family ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Q8852_01125 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Q8852_03780 DnaJ C-terminal domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
D Q8852_01120 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D Q8852_04495 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Q8852_01875 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Q8852_04015 thioredoxin family protein K03671 TXN; thioredoxin
D Q8852_04300 thioredoxin family protein K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:mses04131]
D Q8852_01835 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Q8852_04035 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:mses03032]
D Q8852_00430 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_00700 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02350 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02575 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03040 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03415 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03400 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Q8852_00005 DnaA/Hda family protein K02313 dnaA; chromosomal replication initiator protein
D Q8852_02850 DnaB-like helicase C-terminal domain-containing protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Q8852_03235 DnaB-like helicase C-terminal domain-containing protein K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Q8852_01940 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Q8852_02110 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_02735 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_02300 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Q8852_04140 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Q8852_04345 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Q8852_00980 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Q8852_00380 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Q8852_01015 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D Q8852_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Q8852_03295 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Q8852_02270 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Q8852_00795 DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Q8852_00975 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Q8852_00230 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Q8852_03300 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:mses03036]
D Q8852_00430 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_00700 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02350 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02575 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03040 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03415 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03520 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Q8852_03400 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Q8852_00005 DnaA/Hda family protein K02313 dnaA; chromosomal replication initiator protein
D Q8852_03515 AAA family ATPase K03529 smc; chromosome segregation protein
D Q8852_01175 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D Q8852_01180 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D Q8852_02505 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Q8852_00975 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Q8852_00230 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D Q8852_01825 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Q8852_03735 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Q8852_03055 site-specific integrase K04763 xerD; integrase/recombinase XerD
D Q8852_03775 hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D Q8852_04045 yihA; ribosome biogenesis GTP-binding protein YihA/YsxC K03978 engB; GTP-binding protein
D Q8852_01275 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:mses03400]
D Q8852_01975 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Q8852_02005 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Q8852_02595 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Q8852_04265 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Q8852_04280 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Q8852_03625 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D Q8852_03620 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D Q8852_02840 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D Q8852_01755 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Q8852_01495 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Q8852_01500 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Q8852_04065 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Q8852_02300 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Q8852_04140 PolC-type DNA polymerase III K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Q8852_04345 exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Q8852_00980 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Q8852_02110 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_02735 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_03295 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Q8852_04510 AAA family ATPase K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Q8852_04115 recA; recombinase RecA K03553 recA; recombination protein RecA
D Q8852_01240 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Q8852_01245 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Q8852_00990 toprim domain-containing protein K06187 recR; recombination protein RecR
D Q8852_03395 recU; Holliday junction resolvase RecU K03700 recU; recombination protein U
D Q8852_02270 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Q8852_00795 DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Q8852_03300 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Q8852_03400 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Q8852_02190 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Q8852_04450 UvrD-helicase domain-containing protein K03658 helD; DNA helicase IV [EC:5.6.2.4]
D Q8852_00615 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Q8852_00620 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:mses03029]
D Q8852_03460 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Q8852_01280 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Q8852_01330 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D Q8852_04135 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D Q8852_00215 fusA; elongation factor G K02355 fusA; elongation factor G
D Q8852_01095 era; GTPase Era K03595 era; GTPase
D Q8852_04160 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Q8852_03270 class I tRNA ligase family protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Q8852_03475 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Q8852_01935 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Q8852_00815 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Q8852_01195 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Q8852_01200 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Q8852_01190 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Q8852_02110 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_02735 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D Q8852_01125 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Q8852_01120 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D Q8852_03780 DnaJ C-terminal domain-containing protein K03686 dnaJ; molecular chaperone DnaJ
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:mses02000]
D Q8852_00400 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Q8852_02385 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Q8852_00405 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Q8852_02380 ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Q8852_01075 ATP-binding cassette domain-containing protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Q8852_02160 ABC transporter permease subunit K11070 potC; spermidine/putrescine transport system permease protein
D Q8852_02155 ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D Q8852_02150 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Q8852_01605 ATP-binding cassette domain-containing protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Q8852_00550 hypothetical protein K07335 bmpA; basic membrane protein A and related proteins
D Q8852_00565 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D Q8852_00570 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D Q8852_00560 ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Q8852_01610 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein
D Q8852_01615 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Q8852_01470 hypothetical protein K02044 phnD; phosphonate transport system substrate-binding protein
D Q8852_01480 ABC transporter permease subunit K02042 phnE; phosphonate transport system permease protein
D Q8852_01475 ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Q8852_01365 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D Q8852_01655 ABC transporter permease K15581 oppB; oligopeptide transport system permease protein
D Q8852_01370 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D Q8852_01660 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein
D Q8852_01375 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Q8852_01665 ABC transporter ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D Q8852_01670 ATP-binding cassette domain-containing protein K10823 oppF; oligopeptide transport system ATP-binding protein
D Q8852_00365 energy-coupling factor transporter transmembrane component T K16785 ecfT; energy-coupling factor transport system permease protein
D Q8852_00375 energy-coupling factor transporter ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Q8852_00370 ATP-binding cassette domain-containing protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Q8852_03790 ABC transporter permease K11051 cylB; multidrug/hemolysin transport system permease protein
D Q8852_03785 ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D Q8852_02125 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Q8852_03610 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Q8852_04480 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Q8852_01055 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D Q8852_02260 MscL family protein K03282 mscL; large conductance mechanosensitive channel
D Q8852_02050 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D Q8852_03230 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Q8852_04200 amino acid permease K20265 gadC; glutamate:GABA antiporter
D Q8852_02280 potassium transporter TrkG K03498 trkH; trk/ktr system potassium uptake protein
D Q8852_02275 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D Q8852_01635 chromate transporter K07240 chrA; chromate transporter
C 02044 Secretion system [BR:mses02044]
D Q8852_01210 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D Q8852_02785 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D Q8852_00495 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Q8852_03425 secDF; protein translocase subunit SecDF K12257 secDF; SecD/SecF fusion protein
D Q8852_03370 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D Q8852_01570 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D Q8852_04100 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D Q8852_04350 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Q8852_01045 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
C 02042 Bacterial toxins [BR:mses02042]
D Q8852_03230 CNNM domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system
C 02035 Bacterial motility proteins
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:mses04812]
D Q8852_02505 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
C 04147 Exosome [BR:mses04147]
D Q8852_00200 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Q8852_01835 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Q8852_01710 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Q8852_04035 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Q8852_01125 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D Q8852_01130 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Q8852_01920 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Q8852_04135 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D Q8852_00100 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Q8852_04095 nucleoside monophosphate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Q8852_03465 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Q8852_03390 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:mses02048]
D Q8852_00865 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Q8852_04330 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Q8852_00870 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Q8852_00885 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Q8852_04320 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Q8852_00890 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Q8852_04325 class I SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Q8852_03285 type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D Q8852_03295 Dam family site-specific DNA-(adenine-N6)-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D Q8852_00065 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Q8852_01955 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Q8852_03290 DNA methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Q8852_00430 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_00700 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02350 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02575 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03040 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_03415 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Q8852_02030 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D Q8852_02505 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Q8852_00975 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D Q8852_00230 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Q8852_01775 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Q8852_01550 redoxin domain-containing protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Q8852_03635 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Q8852_03530 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Q8852_02045 DNA integrity scanning protein DisA nucleotide-binding domain protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Q8852_03630 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Q8852_03245 DHH family phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D Q8852_03550 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Q8852_00170 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Q8852_03350 cation-translocating P-type ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D Q8852_02195 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D Q8852_02080 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Q8852_04170 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Q8852_00340 Tex-like N-terminal domain-containing protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D Q8852_03855 tig; trigger factor K03545 tig; trigger factor
D Q8852_00730 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
C 99976 Replication and repair
D Q8852_00325 DNA processing protein K04096 smf; DNA processing protein
D Q8852_01965 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D Q8852_00240 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_00760 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_00910 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_01390 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_01490 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_01865 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_02705 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_04365 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_04440 IS30 family transposase K07482 K07482; transposase, IS30 family
D Q8852_00115 transposase K07493 K07493; putative transposase
D Q8852_00025 IS3 family transposase K07497 K07497; putative transposase
D Q8852_00135 IS3 family transposase K07497 K07497; putative transposase
D Q8852_00555 IS3 family transposase K07497 K07497; putative transposase
D Q8852_00590 IS3 family transposase K07497 K07497; putative transposase
D Q8852_00695 IS3 family transposase K07497 K07497; putative transposase
D Q8852_00925 IS3 family transposase K07497 K07497; putative transposase
D Q8852_01025 IS3 family transposase K07497 K07497; putative transposase
D Q8852_02015 IS3 family transposase K07497 K07497; putative transposase
D Q8852_02175 IS3 family transposase K07497 K07497; putative transposase
D Q8852_02250 IS3 family transposase K07497 K07497; putative transposase
D Q8852_02475 IS3 family transposase K07497 K07497; putative transposase
D Q8852_02510 IS3 family transposase K07497 K07497; putative transposase
D Q8852_02565 IS3 family transposase K07497 K07497; putative transposase
D Q8852_04120 IS3 family transposase K07497 K07497; putative transposase
D Q8852_04245 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Q8852_00985 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
C 99978 Cell growth
C 99993 Cell motility
C 99995 Signaling proteins
C 99992 Structural proteins
C 99994 Others
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Q8852_04165 hypothetical protein K06878 K06878; tRNA-binding protein
D Q8852_01205 YhjD/YihY/BrkB family envelope integrity protein K07058 K07058; membrane protein
D Q8852_01700 LemA family protein K03744 lemA; LemA protein
C 99997 Function unknown
D Q8852_01040 sigma factor-like helix-turn-helix DNA-binding protein K09787 K09787; uncharacterized protein
D Q8852_02285 YneF family protein K09976 K09976; uncharacterized protein
D Q8852_04425 DUF402 domain-containing protein K07586 ygaC; uncharacterized protein
D Q8852_03455 YlxR family protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 24, 2024