+D GENES KO #

  KEGG Orthology (KO) - Mycobacterium simiae

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:msim00010] D MSIM_16360 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D MSIM_34670 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D MSIM_08380 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D MSIM_37350 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D MSIM_23370 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D MSIM_18880 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MSIM_02390 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MSIM_02410 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MSIM_02400 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D MSIM_17650 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D MSIM_36760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MSIM_00810 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D MSIM_06140 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D MSIM_37650 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D MSIM_07830 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MSIM_45200 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MSIM_45660 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_41720 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D MSIM_41730 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D MSIM_30180 adhB; alcohol dehydrogenase B K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D MSIM_09660 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_51380 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_08880 adhC; NADP-dependent alcohol dehydrogenase C K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_17940 putative aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D MSIM_28060 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D MSIM_19140 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D MSIM_09910 pgmA; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D MSIM_04990 ppgK; polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D MSIM_20740 pckG; phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:msim00020] D MSIM_33050 citA; putative citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1] D MSIM_33080 gltA2; citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D MSIM_37720 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D MSIM_02070 acn; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D MSIM_14170 icd2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MSIM_38900 kgd; multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_41720 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D MSIM_41730 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D MSIM_08940 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MSIM_34740 succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MSIM_08950 sucC_1; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MSIM_34730 sucC_2; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MSIM_14020 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MSIM_20190 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MSIM_14030 sdhB; succinate dehydrogenase iron-sulphur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MSIM_20200 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MSIM_14000 sdhC; succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MSIM_14010 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D MSIM_37340 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MSIM_38850 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MSIM_06450 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D MSIM_07950 pca; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D MSIM_20740 pckG; phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D MSIM_07830 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MSIM_45200 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MSIM_45660 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:msim00030] D MSIM_34670 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D MSIM_02320 zwf2; glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_37580 zwf1; glucose-6-phosphate 1-dehydrogenase 1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_49840 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_02340 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D MSIM_37590 gnd2; 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D MSIM_51680 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D MSIM_02620 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D MSIM_02300 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MSIM_02310 tal_1; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D MSIM_33410 tal_2; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D MSIM_41630 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D MSIM_51360 xfp; putative phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D MSIM_17750 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D MSIM_26750 rbsK_1; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D MSIM_41990 rbsK_2; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D MSIM_09910 pgmA; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D MSIM_36670 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D MSIM_34020 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D MSIM_47880 aroK_2; gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D MSIM_23370 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D MSIM_18880 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MSIM_37350 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D MSIM_08380 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:msim00040] D MSIM_01680 ugd_1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_11540 ugd_2; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_19380 udgA; UDP-glucose 6-dehydrogenase UdgA K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_36260 ugd_3; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_35000 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D MSIM_02620 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D MSIM_15600 xylB; D-xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D MSIM_15640 carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17] D MSIM_21400 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D MSIM_03520 putative class II aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D MSIM_15620 fucA; fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:msim00051] D MSIM_34510 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D MSIM_13010 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D MSIM_13030 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D MSIM_13860 pmmB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D MSIM_13120 rmlA2; GDP-mannose pyrophosphorylase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D MSIM_01660 gmdA; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D MSIM_01650 epiA; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D MSIM_03520 putative class II aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D MSIM_15620 fucA; fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D MSIM_36240 hypothetical protein K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D MSIM_08380 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D MSIM_37350 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D MSIM_21400 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D MSIM_34520 mannitol 2-dehydrogenase K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67] D MSIM_34540 mtlD; mannitol dehydrogenase K00045 mtlK; mannitol 2-dehydrogenase [EC:1.1.1.67] D MSIM_23370 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D MSIM_18880 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MSIM_02390 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MSIM_41630 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D MSIM_43830 phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] C 00052 Galactose metabolism [PATH:msim00052] D MSIM_19140 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D MSIM_16670 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D MSIM_16680 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D MSIM_07300 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D MSIM_17510 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D MSIM_28310 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D MSIM_36290 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D MSIM_35000 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D MSIM_09910 pgmA; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D MSIM_16360 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D MSIM_25900 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D MSIM_08380 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D MSIM_41560 aglA; alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:msim00053] D MSIM_01680 ugd_1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_11540 ugd_2; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_19380 udgA; UDP-glucose 6-dehydrogenase UdgA K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_36260 ugd_3; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_34020 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D MSIM_36240 hypothetical protein K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00500 Starch and sucrose metabolism [PATH:msim00500] D MSIM_41560 aglA; alpha-glucosidase AglA K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D MSIM_35000 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D MSIM_21050 bglS; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D MSIM_23800 celA1; glucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D MSIM_38630 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D MSIM_08570 transferase K16150 K16150; glycogen synthase [EC:2.4.1.11] D MSIM_39910 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D MSIM_08560 putative 1,4-alpha-glucan branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D MSIM_09670 alpha-1,4 glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D MSIM_39930 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D MSIM_22150 treS; trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1] D MSIM_51160 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135] D MSIM_46930 malQ_1; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D MSIM_52220 malQ_2; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D MSIM_22140 mak; maltokinase K16146 pep2; maltokinase [EC:2.7.1.175] D MSIM_39920 glgE; alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D MSIM_38620 glgA; capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D MSIM_01220 glgX_1; glycogen operon protein GlgX homolog K01214 ISA; isoamylase [EC:3.2.1.68] D MSIM_11660 glgX_2; glycogen operon protein GlgX homolog K01214 ISA; isoamylase [EC:3.2.1.68] D MSIM_01230 treY; putative maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] D MSIM_01240 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141] D MSIM_29830 otsA; trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D MSIM_14450 otsB; trehalose-phosphate phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D MSIM_42340 trehalase K22934 E3.2.1.28; alpha,alpha-trehalase [EC:3.2.1.28] D MSIM_09910 pgmA; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D MSIM_16360 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D MSIM_34670 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D MSIM_34510 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00620 Pyruvate metabolism [PATH:msim00620] D MSIM_28060 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D MSIM_41720 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D MSIM_41730 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D MSIM_07830 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MSIM_45200 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MSIM_45660 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_29440 mhpF; acetaldehyde dehydrogenase 2 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D MSIM_09660 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_51380 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_30180 adhB; alcohol dehydrogenase B K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D MSIM_08880 adhC; NADP-dependent alcohol dehydrogenase C K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D MSIM_18610 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D MSIM_18620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MSIM_08970 eutD; phosphate acetyltransferase K04020 eutD; phosphotransacetylase D MSIM_00810 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D MSIM_06140 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D MSIM_12340 biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MSIM_13640 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D MSIM_45140 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D MSIM_07610 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_17940 putative aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D MSIM_51180 lldD; putative L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D MSIM_11570 poxB; thiamine pyrophosphate-requiring protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D MSIM_06990 lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D MSIM_46600 lactate 2-monooxygenase K00467 E1.13.12.4; lactate 2-monooxygenase [EC:1.13.12.4] D MSIM_33950 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D MSIM_44800 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D MSIM_03820 hypothetical protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D MSIM_38860 putative malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D MSIM_43140 mez; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D MSIM_07950 pca; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D MSIM_38850 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MSIM_06450 mqo; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D MSIM_37340 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MSIM_02370 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D MSIM_20740 pckG; phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D MSIM_37650 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D MSIM_51720 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_27370 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:msim00630] D MSIM_17840 aceA_1; isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D MSIM_50440 aceA_2; isocitrate lyase 2 K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D MSIM_51720 glcB; malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D MSIM_38850 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MSIM_33050 citA; putative citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1] D MSIM_33080 gltA2; citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1] D MSIM_37720 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D MSIM_02070 acn; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D MSIM_28060 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39880 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D MSIM_13640 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D MSIM_13590 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D MSIM_13600 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D MSIM_45140 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D MSIM_01870 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_01880 mutA; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_31330 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D MSIM_31320 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D MSIM_31170 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D MSIM_39000 oxidoreductase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D MSIM_44730 dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D MSIM_46610 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D MSIM_04380 srpA; catalase-related peroxidase K03781 katE; catalase [EC:1.11.1.6] D MSIM_23170 catalase-related peroxidase K03781 katE; catalase [EC:1.11.1.6] D MSIM_27440 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D MSIM_45380 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D MSIM_28420 glnT; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45490 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45600 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51050 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51550 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_53180 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_37280 glyA1; serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MSIM_51750 gcvP; putative glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D MSIM_45730 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_46520 gcvH_1; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D MSIM_51810 gcvH_2; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D MSIM_06110 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47] D MSIM_06090 hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D MSIM_06100 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D MSIM_06080 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D MSIM_45790 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D MSIM_38900 kgd; multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D MSIM_44390 cupin K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2] D MSIM_06190 formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9] D MSIM_23350 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D MSIM_23340 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit D MSIM_09890 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D MSIM_06250 oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] D MSIM_22210 oxcA; oxalyl-CoA decarboxylase K01577 oxc; oxalyl-CoA decarboxylase [EC:4.1.1.8] D MSIM_06220 frc_1; formyl-CoA:oxalate CoA-transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D MSIM_06240 frc_2; formyl-CoA:oxalate CoA-transferase K07749 frc; formyl-CoA transferase [EC:2.8.3.16] C 00640 Propanoate metabolism [PATH:msim00640] D MSIM_28060 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D MSIM_18610 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D MSIM_18620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MSIM_34130 bkdA; 2-oxoisovalerate dehydrogenase E1 K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_43200 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D MSIM_10840 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_12340 biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MSIM_13640 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D MSIM_45140 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D MSIM_03910 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D MSIM_13590 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D MSIM_13600 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D MSIM_39880 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D MSIM_01870 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_01880 mutA; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_31330 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D MSIM_31320 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D MSIM_08950 sucC_1; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MSIM_34730 sucC_2; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MSIM_08940 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MSIM_34740 succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MSIM_15430 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D MSIM_37720 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D MSIM_22680 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D MSIM_37700 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D MSIM_02070 acn; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D MSIM_37710 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D MSIM_17840 aceA_1; isocitrate lyase K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] D MSIM_50440 aceA_2; isocitrate lyase 2 K01637 ICL; isocitrate/methylisocitrate lyase [EC:4.1.3.1 4.1.3.30] C 00650 Butanoate metabolism [PATH:msim00650] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_12460 putative dehydrogenase (3-hydroxybutyryl-CoA dehydrogenase FadB?) K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D MSIM_17830 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_29440 mhpF; acetaldehyde dehydrogenase 2 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D MSIM_14020 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MSIM_20190 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MSIM_14030 sdhB; succinate dehydrogenase iron-sulphur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MSIM_20200 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MSIM_14000 sdhC; succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MSIM_14010 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D MSIM_14910 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D MSIM_03910 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D MSIM_20400 gabD1; succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D MSIM_41720 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D MSIM_41730 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D MSIM_07070 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D MSIM_10890 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D MSIM_18900 succinyl-CoA--3-ketoacid-CoA transferase K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5] D MSIM_42500 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D MSIM_49440 methane monooxygenase K18223 prmA; propane 2-monooxygenase large subunit [EC:1.14.13.227] D MSIM_49470 toluene hydroxylase K18224 prmC; propane 2-monooxygenase small subunit [EC:1.14.13.227] D MSIM_49480 monooxygenase K18226 prmD; propane monooxygenase coupling protein D MSIM_49460 methane monooxygenase component C K18225 prmB; propane monooxygenase reductase component [EC:1.18.1.-] D MSIM_49490 alcohol dehydrogenase K18382 adh1; NAD+-dependent secondary alcohol dehydrogenase Adh1 [EC:1.1.1.-] D MSIM_08320 ilvB1; acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_15500 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_20390 putative acetolactate synthase large subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_22300 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_29640 ilvX; putative acetolactate synthase large subunit IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_44650 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_08310 ilvH; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D MSIM_44640 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D MSIM_36640 3-ketoacyl-ACP reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:msim00660] D MSIM_08320 ilvB1; acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_15500 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_20390 putative acetolactate synthase large subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_22300 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_29640 ilvX; putative acetolactate synthase large subunit IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_44650 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_08310 ilvH; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D MSIM_44640 alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D MSIM_08950 sucC_1; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MSIM_34730 sucC_2; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MSIM_08940 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MSIM_34740 succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MSIM_08190 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D MSIM_08180 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D MSIM_08250 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:msim00562] D MSIM_13880 acid phosphatase K21302 sapM; phosphatidylinositol-3-phosphatase [EC:3.1.3.64] D MSIM_00960 impA; putative inositol 1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D MSIM_04980 suhB; inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D MSIM_24190 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D MSIM_24360 hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D MSIM_04170 pgsA1; CDP-diacylglycerol--inositol 3-phosphatidyltransferase K27681 pgsA; phosphatidylinositol phosphate synthase [EC:2.7.8.-] D MSIM_15430 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D MSIM_02390 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:msim00190] D MSIM_10940 nuoA; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D MSIM_10950 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D MSIM_10960 nuoC; NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D MSIM_10970 nuoD; NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D MSIM_10980 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D MSIM_10990 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D MSIM_11000 nuoG; NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D MSIM_11010 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D MSIM_11020 nuoI; NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D MSIM_11030 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D MSIM_11040 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D MSIM_11050 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D MSIM_11060 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D MSIM_11070 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D MSIM_11700 hypothetical protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D MSIM_18770 ndhA; NADH dehydrogenase NdhA K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D MSIM_33440 dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D MSIM_36160 dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D MSIM_51450 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D MSIM_51950 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D MSIM_14020 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MSIM_20190 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MSIM_14030 sdhB; succinate dehydrogenase iron-sulphur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MSIM_20200 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MSIM_14000 sdhC; succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MSIM_14010 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D MSIM_45910 qcrA; cytochrome bc1 complex Rieske iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D MSIM_45900 qcrB; cytochrome bc1 complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D MSIM_45920 qcrC; cytochrome bc1 complex cytochrome c subunit K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D MSIM_02290 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D MSIM_45850 ctaF; putative cytochrome c oxidase polypeptide 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D MSIM_45930 ctaE_2; putative cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D MSIM_08860 ctaD_1; putative cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D MSIM_33420 ctaD_2; cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D MSIM_45840 ctaC; putative cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D MSIM_02250 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D MSIM_00750 cydA; cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D MSIM_00760 cydB; cytochrome c oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D MSIM_39750 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D MSIM_39770 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D MSIM_39760 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D MSIM_39740 atpFH; ATP synthase subunit b-delta K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MSIM_39780 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D MSIM_39710 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MSIM_39730 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MSIM_39720 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D MSIM_28360 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D MSIM_08150 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D MSIM_12750 ppk2; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:msim00710] D MSIM_02400 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D MSIM_02410 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MSIM_23370 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D MSIM_18880 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MSIM_37350 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D MSIM_02300 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D MSIM_41630 rpiB; ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D MSIM_02390 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MSIM_02620 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D MSIM_02310 tal_1; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D MSIM_33410 tal_2; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D MSIM_02370 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D MSIM_37650 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D MSIM_38850 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:msim00720] D MSIM_37650 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1] D MSIM_02370 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D MSIM_07950 pca; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D MSIM_38850 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MSIM_37340 fumC; fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D MSIM_14020 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MSIM_20190 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D MSIM_14030 sdhB; succinate dehydrogenase iron-sulphur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MSIM_20200 fumarate reductase K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D MSIM_14000 sdhC; succinate dehydrogenase 2 membrane subunit SdhC K00241 sdhC; succinate dehydrogenase cytochrome b subunit D MSIM_14010 sdhD; succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D MSIM_08940 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MSIM_34740 succinate--CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D MSIM_08950 sucC_1; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MSIM_34730 sucC_2; succinate--CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_41720 korA; 2-oxoglutarate oxidoreductase subunit KorA K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D MSIM_41730 korB; 2-oxoglutarate oxidoreductase subunit KorB K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D MSIM_14170 icd2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MSIM_02070 acn; aconitate hydratase K27802 acnA; aconitate hydratase A / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D MSIM_12340 biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MSIM_34110 enoyl-CoA hydratase K15019 K15019; 3-hydroxypropionyl-coenzyme A dehydratase [EC:4.2.1.116] D MSIM_40220 dehydratase K14470 mct; 2-methylfumaryl-CoA isomerase [EC:5.4.1.3] D MSIM_39880 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D MSIM_01870 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_01880 mutA; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_31320 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D MSIM_31330 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D MSIM_14280 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D MSIM_18620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MSIM_18610 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D MSIM_28060 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:msim00680] D MSIM_30180 adhB; alcohol dehydrogenase B K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D MSIM_06190 formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9] D MSIM_23350 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D MSIM_23340 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit D MSIM_37280 glyA1; serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MSIM_36760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MSIM_02370 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D MSIM_38850 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MSIM_23370 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D MSIM_18880 fba; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D MSIM_37350 glpX; fructose-1,6-bisphosphatase class 2 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D MSIM_08380 pfkA; ATP-dependent 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D MSIM_28430 glutamine amidotransferase K22081 mgsA; methylamine---glutamate N-methyltransferase subunit A [EC:2.1.1.21] D MSIM_28440 protein glxC K22082 mgsB; methylamine---glutamate N-methyltransferase subunit B [EC:2.1.1.21] D MSIM_28450 FMN-binding glutamate synthase family protein K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21] D MSIM_14700 5,10-methylenetetrahydromethanopterin reductase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2] D MSIM_18610 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D MSIM_18620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MSIM_28060 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D MSIM_17650 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D MSIM_08260 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_15610 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_35770 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_33010 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D MSIM_08850 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D MSIM_38270 fbiC; FO synthase K11779 fbiC; FO synthase [EC:2.5.1.147 4.3.1.32] D MSIM_08140 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105] D MSIM_13080 cofD; 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] D MSIM_13090 fbiB; coenzyme F420:L-glutamate ligase K24998 fbiB; dehydro coenzyme F420 reductase / coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:1.3.8.17 6.3.2.31 6.3.2.34] C 00910 Nitrogen metabolism [PATH:msim00910] D MSIM_09890 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D MSIM_20060 narK3_1; MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D MSIM_20070 narK3_2; MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D MSIM_20940 narK3_3; MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D MSIM_20120 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D MSIM_20110 nirD; nitrite reductase small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D MSIM_04230 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D MSIM_05870 oxidoreductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D MSIM_12850 oxidoreductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D MSIM_50570 hypothetical 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D MSIM_52790 oxidoreductase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D MSIM_20980 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D MSIM_41520 gdh; NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D MSIM_28420 glnT; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45490 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45600 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51050 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51550 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_53180 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_25450 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D MSIM_25460 gltD; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D MSIM_16620 cynS; cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104] D MSIM_02650 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D MSIM_13480 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D MSIM_28800 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D MSIM_39410 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:msim00920] D MSIM_42370 subI; sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D MSIM_42380 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D MSIM_42390 cysW; sulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D MSIM_42400 cysA; sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D MSIM_03170 putative nitrate ABC transporter, periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_23240 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_23730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_32730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_03160 putative nitrate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D MSIM_23220 sulfate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D MSIM_23720 putative nitrate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D MSIM_32750 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D MSIM_03150 putative nitrate ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_23230 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_23710 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_32740 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_17290 alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D MSIM_23450 putative alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D MSIM_38360 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D MSIM_39440 cysNC; bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D MSIM_38370 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MSIM_39430 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MSIM_44420 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D MSIM_46860 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D MSIM_06300 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D MSIM_42430 cysH; putative phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D MSIM_29980 putative sulfite reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D MSIM_43180 bifunctional reductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D MSIM_42440 sir; sulfite reductase [ferredoxin] K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1] D MSIM_49720 hypothetical protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2] D MSIM_13620 sseA; putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_30960 cysA2; thiosulfate sulfurtransferase CysA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_44610 sseB; putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_42980 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D MSIM_27860 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D MSIM_42990 cysK; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47] D MSIM_14190 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D MSIM_39570 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D MSIM_37140 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D MSIM_18780 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D MSIM_12780 membrane protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:msim00061] D MSIM_12340 biotinylated protein TB7.3 K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D MSIM_13640 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D MSIM_45140 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D MSIM_40080 mbtL; acyl carrier protein MbtL K02078 acpP; acyl carrier protein D MSIM_45170 acpM; meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein D MSIM_16370 fabD2; malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MSIM_45180 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MSIM_40990 fas; type I polyketide synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D MSIM_13360 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MSIM_15480 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MSIM_12430 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_20250 fabG4; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_22950 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_31770 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34040 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34210 fabG_3; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34260 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35190 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35590 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35600 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_40200 fabG2; putative oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_50220 putative 2-nitropropane dioxygenase, NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D MSIM_31090 desA1_1; acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D MSIM_53420 desA1_2; acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D MSIM_37290 desA2; acyl-ACP desaturase K03922 desA2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.-] D MSIM_35640 hypothetical protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_43580 AMP-dependent ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_45990 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_29220 oxidoreductase K28220 scdG; hydroxylacyl dehydrogenase [EC:1.1.-.-] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:msim00071] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_05960 ltp1; lipid-transfer protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_12520 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29240 fadA6; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29330 fadA5; steroid 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_31960 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_37930 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_43200 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D MSIM_09570 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_10820 fadE23; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_10910 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_20430 fadE4; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_21710 fadE2; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_22060 fadE1; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_23390 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_24700 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_26430 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_31940 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_34890 fadE13; acyl-CoA dehydrogenase FadE13 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_05200 fadE20; acyl-CoA dehydrogenase FadE20 K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D MSIM_18730 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D MSIM_18720 fadE7; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D MSIM_35640 hypothetical protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_43580 AMP-dependent ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_45990 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_40090 mbtM; long-chain-fatty-acid--[acyl-carrier-protein] ligase MbtM K01909 mbtM; long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:6.2.1.20] D MSIM_12980 alkB; alkane 1-monooxygenase AlkB K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D MSIM_51260 reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D MSIM_30180 adhB; alcohol dehydrogenase B K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D MSIM_09660 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_51380 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis [PATH:msim00073] D MSIM_14480 acrA1; short chain dehydrogenase K28138 acrB; alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84] D MSIM_00480 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_02460 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_12760 tgs3; diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_14440 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_20580 putative diacyglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_26820 tgs2; putative diacyglycerol O-acyltransferase tgs2 K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_30600 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_41430 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_45450 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] C 00074 Mycolic acid biosynthesis [PATH:msim00074] D MSIM_13640 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D MSIM_45140 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D MSIM_41000 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D MSIM_05990 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D MSIM_40080 mbtL; acyl carrier protein MbtL K02078 acpP; acyl carrier protein D MSIM_45170 acpM; meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein D MSIM_16370 fabD2; malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MSIM_45180 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MSIM_40990 fas; type I polyketide synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D MSIM_17160 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K11608 mtfabH; mycobacterial beta-ketoacyl-[acyl-carrier protein] synthase III [EC:2.3.1.301] D MSIM_45160 kasA; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K11609 kasA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase I [EC:2.3.1.293] D MSIM_14500 kasB_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K27070 kasB; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase II [EC:2.3.1.294] D MSIM_45150 kasB_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K27070 kasB; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase II [EC:2.3.1.294] D MSIM_01970 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K11610 mabA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.-] D MSIM_16550 UPF0336 protein K27071 hadA; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadA [EC:4.2.1.-] D MSIM_16540 hadB; (3R)-hydroxyacyl-ACP dehydratase subunit HadB K27072 hadB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadB [EC:4.2.1.-] D MSIM_23930 (R)-hydratase K27689 hadAB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadAB [EC:4.2.1.-] D MSIM_16530 UPF0336 protein K27073 hadC; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadC [EC:4.2.1.-] D MSIM_17480 UPF0336 protein K27074 hadD; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadD [EC:4.2.1.-] D MSIM_01960 inhA; enoyl-[acyl-carrier-protein] reductase [NADH] K11611 inhA; meromycolic acid enoyl-[acyl-carrier protein] reductase [EC:1.3.1.118] D MSIM_31090 desA1_1; acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D MSIM_53420 desA1_2; acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D MSIM_37290 desA2; acyl-ACP desaturase K03922 desA2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.-] D MSIM_17820 umaA1; SAM-dependent methyltransferase K26590 umaA; mycolic acid methyltransferase UmaA [EC:2.1.1.-] D MSIM_17810 umaA2; SAM-dependent methyltransferase K26591 pcaA; cyclopropane mycolic acid synthase PcaA D MSIM_16460 mmaA4; hydroxymycolate synthase MmaA4 K26592 mmaA4; hydroxy mycolic acid synthase MmaA4 D MSIM_16450 cmaB_1; methoxy mycolic acid synthase MmaA3 K26593 mmaA3; methoxy mycolic acid synthase MmaA3 D MSIM_16440 mmaA2_2; cyclopropane mycolic acid synthase MmaA2 K26595 mmaA2; cyclopropane mycolic acid synthase MmaA2 D MSIM_38190 mmaA2_4; cyclopropane mycolic acid synthase MmaA2 K26595 mmaA2; cyclopropane mycolic acid synthase MmaA2 D MSIM_16420 cmaD; mycolic acid methyltransferase MmaA1 K26594 mmaA1; mycolic acid methyltransferase MmaA1 [EC:2.1.1.-] D MSIM_17490 cmaA2; cyclopropane mycolic acid synthase 2 K26596 cmaA2; cyclopropane mycolic acid synthase CmaA2 D MSIM_22050 fgd2; F420-dependent hydroxymycolic acid dehydrogenase K00120 fgd2; F420-dependent hydroxymycolic acid dehydrogenase [EC:1.1.98.-] D MSIM_26000 accD4; propionyl-CoA carboxylase subunit beta K27093 accD4; long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.- 2.1.3.-] D MSIM_13590 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D MSIM_13600 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D MSIM_25980 fadD32; long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-] D MSIM_25990 pks13; polyketide synthase K12437 pks13; polyketide synthase 13 D MSIM_41220 short-chain type dehydrogenase/reductase K27306 cmrA; mycolic acid reductase D MSIM_22120 fbpC; diacylglycerol acyltransferase/mycolyltransferase Ag85C K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_25950 fbpA; diacylglycerol acyltransferase/mycolyltransferase Ag85A K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_50860 fbpB; diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_13840 cutinase K27308 tdmh; trehalose dimycolate hydrolase D MSIM_15160 hypothetical protein K27359 cut3; trehalose dimycolate hydrolase C 00100 Steroid biosynthesis [PATH:msim00100] D MSIM_30210 cytochrome P450 K05917 CYP51; sterol 14alpha-demethylase [EC:1.14.14.154 1.14.15.36] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:msim00121] D MSIM_11130 short-chain dehydrogenase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] D MSIM_34450 oxidoreductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] D MSIM_47800 putative short chain dehydrogenase/reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] D MSIM_20450 AMP-dependent synthetase K15868 baiB; bile acid-coenzyme A ligase [EC:6.2.1.7] D MSIM_40770 AMP-dependent synthetase K15868 baiB; bile acid-coenzyme A ligase [EC:6.2.1.7] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:msim00561] D MSIM_06080 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D MSIM_45790 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_08880 adhC; NADP-dependent alcohol dehydrogenase C K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D MSIM_27520 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D MSIM_54100 phosphatase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D MSIM_01320 plsB1; putative acyltransferase plsB1 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MSIM_41450 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MSIM_10080 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MSIM_46040 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MSIM_45090 dagK; diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D MSIM_00480 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_02460 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_12760 tgs3; diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_14440 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_20580 putative diacyglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_26820 tgs2; putative diacyglycerol O-acyltransferase tgs2 K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_30600 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_41430 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_45450 diacylglycerol O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75] D MSIM_22120 fbpC; diacylglycerol acyltransferase/mycolyltransferase Ag85C K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_25950 fbpA; diacylglycerol acyltransferase/mycolyltransferase Ag85A K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_50860 fbpB; diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_41270 hypothetical protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D MSIM_21080 monoacylglycerol lipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] C 00564 Glycerophospholipid metabolism [PATH:msim00564] D MSIM_08130 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D MSIM_16820 gpsA2; putative glycerol-3-phosphate dehydrogenase 2 [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D MSIM_13780 glpD2; glycerol-3-phosphate dehydrogenase 2 K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D MSIM_45120 glpD1; glycerol-3-phosphate dehydrogenase 1 K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D MSIM_01320 plsB1; putative acyltransferase plsB1 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MSIM_41450 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MSIM_10080 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MSIM_46040 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MSIM_45090 dagK; diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107] D MSIM_25640 glpQ1; putative glycerophosphoryl diester phosphodiesterase 1 K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D MSIM_28910 putative glycerophosphoryl diester phosphodiesterase precursor (GlpQ) K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D MSIM_50060 glpQ2; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D MSIM_18920 putative ethanolamine ammonia-lyase, heavy subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D MSIM_18930 eutC; ethanolamine ammonia-lyase light chain K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D MSIM_06840 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D MSIM_10090 hypothetical protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D MSIM_18200 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D MSIM_18190 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D MSIM_05380 pgsA3; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D MSIM_51850 pgsA2; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism D MSIM_45100 flavoprotein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] C 00600 Sphingolipid metabolism D MSIM_23770 sulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1] D MSIM_52780 atsA_2; arylsulfatase K01130 atsA; arylsulfatase [EC:3.1.6.1] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism [PATH:msim00592] D MSIM_43200 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D MSIM_05960 ltp1; lipid-transfer protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_12520 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29240 fadA6; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29330 fadA5; steroid 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_31960 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_37930 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:msim01040] D MSIM_31090 desA1_1; acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D MSIM_53420 desA1_2; acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D MSIM_37290 desA2; acyl-ACP desaturase K03922 desA2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.-] D MSIM_00460 stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_12710 stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_12720 stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_22010 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_40130 desA3; NADPH-dependent stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_12730 NADPH oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D MSIM_22020 oxidoreductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D MSIM_40120 stearoyl-CoA 9-desaturase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D MSIM_43200 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D MSIM_00800 tesB1; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D MSIM_04080 tesB2; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:msim00230] D MSIM_09910 pgmA; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D MSIM_36670 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D MSIM_30870 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D MSIM_30400 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D MSIM_34790 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D MSIM_18800 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D MSIM_30840 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D MSIM_30580 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D MSIM_30590 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D MSIM_30880 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D MSIM_13540 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D MSIM_13530 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D MSIM_30480 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D MSIM_30450 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D MSIM_34800 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D MSIM_03860 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D MSIM_13850 punA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D MSIM_46360 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D MSIM_14490 nucleoside hydrolase K01239 E3.2.2.1; purine nucleosidase [EC:3.2.2.1] D MSIM_28400 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D MSIM_14620 guaB3; putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D MSIM_14630 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D MSIM_41810 ndkA; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MSIM_40050 rdgB; non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D MSIM_14540 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D MSIM_51690 guaB1; putative oxidoreductase K26110 guaB1; GMP reductase [EC:1.7.1.7] D MSIM_19550 putative amidohydrolase K01487 guaD; guanine deaminase [EC:3.5.4.3] D MSIM_02890 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D MSIM_09280 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MSIM_08910 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MSIM_20410 nrdB; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MSIM_42940 dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 dgt; dGTPase [EC:3.1.5.1] D MSIM_03850 relA; putative GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D MSIM_17570 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D MSIM_36790 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D MSIM_00730 cya; adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D MSIM_14810 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D MSIM_16720 cyaO; guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D MSIM_19630 cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D MSIM_28270 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D MSIM_37320 adenylate/guanylate cyclase domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D MSIM_39100 pH-sensitive adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D MSIM_50980 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D MSIM_18820 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D MSIM_45820 adoK; adenosine kinase K00856 ADK; adenosine kinase [EC:2.7.1.20] D MSIM_13970 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D MSIM_10270 ymdB; hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D MSIM_15540 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D MSIM_36730 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D MSIM_04180 AP-4-A phosphorylase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D MSIM_38360 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D MSIM_39440 cysNC; bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D MSIM_38370 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MSIM_39430 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MSIM_51620 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D MSIM_51630 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D MSIM_51640 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:msim00240] D MSIM_02920 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D MSIM_02930 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D MSIM_02960 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D MSIM_02950 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D MSIM_46780 pyrD; dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D MSIM_19080 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D MSIM_02910 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D MSIM_06860 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D MSIM_41810 ndkA; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MSIM_36730 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D MSIM_13610 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D MSIM_54030 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D MSIM_53950 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D MSIM_13870 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D MSIM_02970 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D MSIM_10270 ymdB; hypothetical protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D MSIM_13990 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D MSIM_19420 dcd; dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D MSIM_09280 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MSIM_08910 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MSIM_20410 nrdB; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MSIM_12930 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D MSIM_04940 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MSIM_13980 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D MSIM_05520 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D MSIM_05460 thyX; flavin-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D MSIM_30070 putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:msim00250] D MSIM_01040 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D MSIM_01440 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D MSIM_44110 asnB_1; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D MSIM_45830 asnB_2; putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D MSIM_19330 aspC; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D MSIM_05850 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D MSIM_00220 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D MSIM_00210 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D MSIM_18820 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D MSIM_30450 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D MSIM_02960 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D MSIM_14910 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D MSIM_03910 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D MSIM_20400 gabD1; succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D MSIM_25450 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D MSIM_25460 gltD; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D MSIM_41520 gdh; NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D MSIM_38400 rocA; pyrroline-5-carboxylate dehydrogenase RocA K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D MSIM_28420 glnT; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45490 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45600 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51050 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51550 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_53180 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_02920 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D MSIM_02930 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D MSIM_30590 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D MSIM_14990 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MSIM_33470 hypothetical protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MSIM_30870 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:msim00260] D MSIM_27380 ask; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D MSIM_27390 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MSIM_39610 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D MSIM_39630 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D MSIM_39620 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D MSIM_37280 glyA1; serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MSIM_06080 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D MSIM_45790 hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D MSIM_17650 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D MSIM_08260 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_15610 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_35770 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_33010 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D MSIM_08850 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D MSIM_11190 aofH; putative flavin-containing monoamine oxidase AofH K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_37680 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_51750 gcvP; putative glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D MSIM_45730 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_46520 gcvH_1; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D MSIM_51810 gcvH_2; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D MSIM_40750 aao_1; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D MSIM_50640 aao_2; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D MSIM_18200 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D MSIM_19210 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D MSIM_14570 SAM-dependent methyltransferase K18897 sdmt; sarcosine/dimethylglycine N-methyltransferase [EC:2.1.1.157] D MSIM_37120 cbs; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D MSIM_01300 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D MSIM_00850 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D MSIM_00860 trpB_1; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D MSIM_37780 trpB_2; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:msim00270] D MSIM_42980 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D MSIM_27860 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D MSIM_42990 cysK; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47] D MSIM_44450 putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D MSIM_37120 cbs; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D MSIM_41700 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D MSIM_46910 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D MSIM_37750 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D MSIM_02860 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D MSIM_04020 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D MSIM_22640 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D MSIM_17140 mtnP; S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D MSIM_46360 laccase domain protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D MSIM_12940 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D MSIM_27380 ask; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D MSIM_27390 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MSIM_39610 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D MSIM_39630 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D MSIM_14190 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D MSIM_39570 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D MSIM_37140 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D MSIM_14180 metC; bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D MSIM_18780 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D MSIM_45740 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MSIM_27460 egtA; glutamate--cysteine ligase EgtA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D MSIM_13620 sseA; putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_30960 cysA2; thiosulfate sulfurtransferase CysA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_44610 sseB; putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_38850 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D MSIM_08260 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_15610 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_35770 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_33010 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:msim00280] D MSIM_45740 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MSIM_34130 bkdA; 2-oxoisovalerate dehydrogenase E1 K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_09570 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_10820 fadE23; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_10910 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_20430 fadE4; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_21710 fadE2; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_22060 fadE1; acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_23390 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_24700 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_26430 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_31940 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_34890 fadE13; acyl-CoA dehydrogenase FadE13 K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D MSIM_41300 fadE19; acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_05960 ltp1; lipid-transfer protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_12520 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29240 fadA6; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29330 fadA5; steroid 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_31960 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_37930 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_13640 acetyl-/propionyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14] D MSIM_13590 accD5; putative propionyl-CoA carboxylase beta chain 5 K27094 accD5; propionyl-CoA/long-chain acyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.3 6.4.1.- 2.1.3.15] D MSIM_13600 hypothetical protein K27095 accE5; acyl-CoA carboxylase epsilon subunit D MSIM_45140 accD6; putative propionyl-CoA carboxylase beta chain 6 K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15] D MSIM_39880 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D MSIM_01870 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_01880 mutA; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_31330 methylmalonyl-CoA mutase K01849 E5.4.99.2B; methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] D MSIM_31320 methylmalonyl-CoA mutase K01848 E5.4.99.2A; methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] D MSIM_15450 mmsB; putative 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D MSIM_15430 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_03910 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D MSIM_41290 accA1; acetyl-/propionyl-coenzyme A carboxylase alpha chain K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D MSIM_41280 accD1; acetyl-/propionyl-CoA carboxylase subunit beta K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D MSIM_07070 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D MSIM_10890 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D MSIM_18900 succinyl-CoA--3-ketoacid-CoA transferase K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:msim00290] D MSIM_01300 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D MSIM_08190 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D MSIM_08180 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D MSIM_08250 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D MSIM_08320 ilvB1; acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_15500 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_20390 putative acetolactate synthase large subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_22300 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_29640 ilvX; putative acetolactate synthase large subunit IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_44650 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_08310 ilvH; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D MSIM_08300 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D MSIM_21020 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D MSIM_45740 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MSIM_19330 aspC; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D MSIM_27370 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:msim00300] D MSIM_39610 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D MSIM_27380 ask; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D MSIM_27390 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MSIM_03510 putative dihydrodipicolinate synthetase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MSIM_05450 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MSIM_40380 hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MSIM_05710 dapB_1; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D MSIM_05760 dapB_2; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D MSIM_38520 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D MSIM_00250 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D MSIM_32630 N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D MSIM_38530 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D MSIM_05220 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D MSIM_26930 lysA_1; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D MSIM_36710 lysA_2; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D MSIM_39600 lysA_3; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D MSIM_46270 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MSIM_46280 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:msim00310] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_18720 fadE7; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_03910 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D MSIM_20400 gabD1; succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:msim00220] D MSIM_00240 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D MSIM_00220 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D MSIM_00210 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D MSIM_43300 hypothetical protein K27545 argZ; arginine dihydrolase [EC:3.5.3.27] D MSIM_51620 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D MSIM_51630 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D MSIM_51640 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D MSIM_36110 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D MSIM_30590 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D MSIM_28420 glnT; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45490 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45600 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51050 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51550 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_53180 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_02920 carB; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D MSIM_02930 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D MSIM_41520 gdh; NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D MSIM_19330 aspC; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D MSIM_05390 N-acetylglutamate synthase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D MSIM_00270 argJ; arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D MSIM_18330 hypothetical protein K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D MSIM_00260 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D MSIM_00280 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D MSIM_00250 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:msim00330] D MSIM_11720 putative Orn/Lys/Arg decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D MSIM_51600 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D MSIM_25870 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D MSIM_04020 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_11190 aofH; putative flavin-containing monoamine oxidase AofH K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_37680 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_06940 amiC; putative amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_39080 amiB2; putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_42810 amiA2; putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_43300 hypothetical protein K27545 argZ; arginine dihydrolase [EC:3.5.3.27] D MSIM_43310 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D MSIM_17530 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D MSIM_38410 proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2] D MSIM_38400 rocA; pyrroline-5-carboxylate dehydrogenase RocA K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88] D MSIM_41860 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D MSIM_42020 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D MSIM_31440 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D MSIM_40750 aao_1; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D MSIM_50640 aao_2; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00340 Histidine metabolism [PATH:msim00340] D MSIM_47070 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D MSIM_47060 hisE; phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D MSIM_00940 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D MSIM_00970 priA_1; phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D MSIM_00980 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D MSIM_00950 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D MSIM_00990 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D MSIM_01000 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_15470 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_26310 pat; putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_45390 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_10800 histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D MSIM_01010 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_11190 aofH; putative flavin-containing monoamine oxidase AofH K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_37680 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_27490 egtD; histidine N-alpha-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] D MSIM_27470 egtB; hercynine oxygenase K18912 egtB; gamma-glutamyl hercynylcysteine S-oxide synthase [EC:1.14.99.50] D MSIM_27480 egtC; gamma-glutamyl-hercynylcysteine sulfoxide hydrolase K07008 egtC; gamma-glutamyl hercynylcysteine S-oxide hydrolase [EC:3.5.1.118] D MSIM_27500 egtE; putative hercynylcysteine sulfoxide lyase K18913 egtE; hercynylcysteine S-oxide lyase [EC:4.4.1.36] C 00350 Tyrosine metabolism [PATH:msim00350] D MSIM_01000 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_15470 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_26310 pat; putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_45390 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_10860 hmgA; hypothetical protein K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D MSIM_54000 methyltransferase K00545 COMT; catechol O-methyltransferase [EC:2.1.1.6] D MSIM_11190 aofH; putative flavin-containing monoamine oxidase AofH K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_37680 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_43950 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D MSIM_30180 adhB; alcohol dehydrogenase B K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D MSIM_09660 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_51380 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_36600 hypothetical protein K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9] D MSIM_21390 aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D MSIM_35750 aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D MSIM_20400 gabD1; succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:msim00360] D MSIM_11190 aofH; putative flavin-containing monoamine oxidase AofH K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_37680 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_43950 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D MSIM_34050 paaG_4; enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D MSIM_35680 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D MSIM_35700 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D MSIM_40340 enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_12460 putative dehydrogenase (3-hydroxybutyryl-CoA dehydrogenase FadB?) K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D MSIM_17830 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D MSIM_01000 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_15470 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_26310 pat; putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_45390 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_49980 katG2; catalase-peroxidase 2 K03782 katG; catalase-peroxidase [EC:1.11.1.21] D MSIM_06940 amiC; putative amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_39080 amiB2; putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_42810 amiA2; putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_51260 reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D MSIM_31520 mhpA_1; 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D MSIM_49250 mhpA_2; 3-(3-hydroxyphenyl)propionate hydroxylase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] D MSIM_31530 mhpB; 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnam ic acid 1,2-dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D MSIM_31510 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D MSIM_32110 alpha/beta hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D MSIM_29430 hsaE; hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D MSIM_29450 bphI-2; 4-hydroxy-2-oxovalerate aldolase 2 K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D MSIM_29440 mhpF; acetaldehyde dehydrogenase 2 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:msim00380] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_18720 fadE7; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_11190 aofH; putative flavin-containing monoamine oxidase AofH K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_37680 monoamine oxidase K00274 MAO; monoamine oxidase [EC:1.4.3.4] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20980 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D MSIM_46440 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D MSIM_46430 nitrile hydratase K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D MSIM_06940 amiC; putative amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_39080 amiB2; putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_42810 amiA2; putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_04380 srpA; catalase-related peroxidase K03781 katE; catalase [EC:1.11.1.6] D MSIM_23170 catalase-related peroxidase K03781 katE; catalase [EC:1.11.1.6] D MSIM_27440 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D MSIM_49980 katG2; catalase-peroxidase 2 K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:msim00400] D MSIM_46080 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D MSIM_48710 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D MSIM_03270 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D MSIM_03260 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D MSIM_48620 4-hydroxyphenylpyruvate dioxygenase K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118] D MSIM_03280 aroK_1; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D MSIM_12490 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D MSIM_03290 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D MSIM_00890 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D MSIM_00970 priA_1; phosphoribosyl isomerase A K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D MSIM_00870 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D MSIM_00850 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D MSIM_00860 trpB_1; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D MSIM_37780 trpB_2; tryptophan synthase beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D MSIM_23870 secreted chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D MSIM_34680 hypothetical protein K04093 pheA1; chorismate mutase [EC:5.4.99.5] D MSIM_50870 secreted chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D MSIM_26550 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D MSIM_23850 cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91] D MSIM_25680 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51] D MSIM_01000 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_15470 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_26310 pat; putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_45390 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:msim00410] D MSIM_28670 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D MSIM_14910 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D MSIM_03910 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_28660 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D MSIM_30070 putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_43200 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D MSIM_15430 mmsA; methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:msim00430] D MSIM_14910 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D MSIM_30410 ggtA; bifunctional cephalosporin acylase/gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D MSIM_05850 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D MSIM_41520 gdh; NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D MSIM_09110 sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15] D MSIM_18620 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D MSIM_18610 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D MSIM_08960 hypothetical protein K15515 sauS; sulfoacetaldehyde dehydrogenase [EC:1.2.1.81] C 00440 Phosphonate and phosphinate metabolism [PATH:msim00440] D MSIM_24230 carbon-phosphorus lyase K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D MSIM_24250 hypothetical protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D MSIM_24240 phnH; carbon-phosphorus lyase subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D MSIM_24210 ABC transporter K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D MSIM_24200 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] C 00450 Selenocompound metabolism [PATH:msim00450] D MSIM_37140 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D MSIM_44450 putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D MSIM_46910 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D MSIM_37750 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D MSIM_02170 csd; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D MSIM_43020 csd1; putative cysteine desulfurase 1 K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D MSIM_02120 trx; thiol reductase thioredoxin K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D MSIM_15270 fused response regulator/thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D MSIM_25220 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D MSIM_38360 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D MSIM_39440 cysNC; bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D MSIM_38370 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MSIM_39430 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MSIM_23320 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D MSIM_23310 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D MSIM_36400 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:msim00460] D MSIM_21050 bglS; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D MSIM_20980 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D MSIM_30410 ggtA; bifunctional cephalosporin acylase/gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D MSIM_01440 ansA; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D MSIM_37280 glyA1; serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MSIM_09890 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:msim00470] D MSIM_14900 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D MSIM_08120 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MSIM_30590 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D MSIM_40010 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D MSIM_46300 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MSIM_05220 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D MSIM_26930 lysA_1; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D MSIM_36710 lysA_2; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D MSIM_39600 lysA_3; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D MSIM_40750 aao_1; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D MSIM_50640 aao_2; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] C 00480 Glutathione metabolism [PATH:msim00480] D MSIM_30410 ggtA; bifunctional cephalosporin acylase/gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D MSIM_28960 UPF0271 protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D MSIM_04360 putative glutamate--cysteine ligase 2-3 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D MSIM_18280 putative glutamate--cysteine ligase 2 K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D MSIM_27460 egtA; glutamate--cysteine ligase EgtA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D MSIM_45710 pepA_2; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D MSIM_41610 pepN; aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D MSIM_14170 icd2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MSIM_37590 gnd2; 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D MSIM_51680 gnd; 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D MSIM_02320 zwf2; glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_37580 zwf1; glucose-6-phosphate 1-dehydrogenase 1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_49840 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_11860 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D MSIM_25870 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D MSIM_04020 speE; polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00520 Amino sugar and nucleotide sugar metabolism [PATH:msim00520] D MSIM_36690 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D MSIM_39810 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MSIM_17710 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MSIM_20290 lpqI; hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D MSIM_14130 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D MSIM_15060 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D MSIM_14990 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MSIM_33470 hypothetical protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MSIM_34510 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D MSIM_34670 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D MSIM_13010 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D MSIM_36270 NAD-dependent dehydratase K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35] D MSIM_16360 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D MSIM_04990 ppgK; polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D MSIM_09910 pgmA; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D MSIM_35000 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D MSIM_01680 ugd_1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_11540 ugd_2; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_19380 udgA; UDP-glucose 6-dehydrogenase UdgA K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_36260 ugd_3; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_16670 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D MSIM_16680 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D MSIM_07300 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D MSIM_17510 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D MSIM_28310 galE1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D MSIM_36290 NAD-dependent dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D MSIM_25900 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D MSIM_13030 manB; phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D MSIM_13860 pmmB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D MSIM_13120 rmlA2; GDP-mannose pyrophosphorylase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D MSIM_38630 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D MSIM_19350 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] C 00541 Biosynthesis of various nucleotide sugars [PATH:msim00541] D MSIM_36690 glmU; bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D MSIM_06620 gmhA_1; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D MSIM_11500 gmhA_2; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D MSIM_36040 gmhA_3; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D MSIM_36030 GHMP kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] D MSIM_36050 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D MSIM_11510 bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D MSIM_35000 galU; UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D MSIM_01680 ugd_1; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_11540 ugd_2; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_19380 udgA; UDP-glucose 6-dehydrogenase UdgA K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_36260 ugd_3; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D MSIM_19350 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D MSIM_11460 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_15310 rmlB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_15320 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D MSIM_36330 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D MSIM_13140 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D MSIM_13120 rmlA2; GDP-mannose pyrophosphorylase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D MSIM_01660 gmdA; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D MSIM_01650 epiA; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:msim00515] D MSIM_36120 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:msim00514] D MSIM_36120 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:msim00542] D MSIM_39690 wecA; decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00550 Peptidoglycan biosynthesis [PATH:msim00550] D MSIM_39810 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MSIM_17710 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MSIM_46330 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D MSIM_46300 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MSIM_46270 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MSIM_08120 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MSIM_46280 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D MSIM_46820 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D MSIM_46290 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MSIM_46320 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D MSIM_24920 rodA; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_46310 ftsW; cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_46230 pbpB; penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D MSIM_24930 pbpA; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D MSIM_07480 dacB2; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MSIM_14110 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MSIM_28370 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D MSIM_27320 putative Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D MSIM_27310 cobQ2; glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:msim00552] D MSIM_46820 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D MSIM_39690 wecA; decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis [PATH:msim00571] D MSIM_04150 pimA; phosphatidyl-myo-inositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D MSIM_45980 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D MSIM_04160 phosphatidylinositol mannoside acyltransferase K22311 ptfP1; phosphatidylinositol dimannoside acyltransferase [EC:2.3.1.265] D MSIM_44630 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D MSIM_38170 pimE; polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D MSIM_00530 mannosyltransferase K14340 K14340; mannosyltransferase [EC:2.4.1.-] D MSIM_19580 mannosyltransferase K14340 K14340; mannosyltransferase [EC:2.4.1.-] D MSIM_46140 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D MSIM_02220 membrane protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D MSIM_46050 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D MSIM_26100 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D MSIM_25940 membrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D MSIM_04740 aftC; alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D MSIM_20330 membrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D MSIM_17070 hypothetical protein K23176 mtxT; methylthioxylose transferase C 00572 Arabinogalactan biosynthesis - Mycobacterium [PATH:msim00572] D MSIM_39690 wecA; decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D MSIM_13130 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D MSIM_26190 galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D MSIM_25910 glfT2; galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D MSIM_26110 aftA; arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D MSIM_25940 membrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D MSIM_04740 aftC; alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D MSIM_26050 embA; putative arabinosyltransferase A K11385 embA; arabinosyltransferase A [EC:2.4.2.-] D MSIM_26040 embB; putative arabinosyltransferase B K11386 embB; arabinosyltransferase B [EC:2.4.2.-] D MSIM_20330 membrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D MSIM_13150 hypothetical protein K27775 lcp1; cell wall biosynthesis protein D MSIM_22120 fbpC; diacylglycerol acyltransferase/mycolyltransferase Ag85C K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_25950 fbpA; diacylglycerol acyltransferase/mycolyltransferase Ag85A K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_50860 fbpB; diacylglycerol acyltransferase/mycolyltransferase Ag85B K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase / mycolyltransferase Ag85 [EC:2.3.1.20 2.3.1.122 2.3.1.-] D MSIM_26220 membrane protein K22902 K22902; D-galactosaminyltransferase C 00543 Exopolysaccharide biosynthesis [PATH:msim00543] D MSIM_39690 wecA; decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D MSIM_42980 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:msim00730] D MSIM_18380 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D MSIM_18390 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D MSIM_08500 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MSIM_18540 thiO; thiamine biosynthesis oxidoreductase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D MSIM_04840 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D MSIM_18520 thiG; thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D MSIM_18550 thiE; thiamine-phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D MSIM_08100 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D MSIM_12500 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D MSIM_15540 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:msim00740] D MSIM_02550 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D MSIM_02610 ribG; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D MSIM_02540 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D MSIM_02580 ribE; riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D MSIM_05930 ribF; riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D MSIM_19740 oxidoreductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] C 00750 Vitamin B6 metabolism [PATH:msim00750] D MSIM_33070 pdxH; pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D MSIM_04210 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D MSIM_10830 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D MSIM_16980 aldo/keto reductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D MSIM_33660 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D MSIM_33010 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D MSIM_39620 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D MSIM_04090 pdxS; pyridoxal 5'-phosphate synthase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D MSIM_04070 pdxT; pyridoxal 5'-phosphate synthase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:msim00760] D MSIM_01040 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D MSIM_01050 nadA; quinolinate synthase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D MSIM_01030 nadC; nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D MSIM_39950 pncB1; nicotinate phosphoribosyltransferase pncB1 K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D MSIM_13850 punA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D MSIM_42050 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D MSIM_36730 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D MSIM_12090 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D MSIM_41970 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D MSIM_47900 pncA; amidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D MSIM_38060 cobB_2; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D MSIM_54070 nadK; NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D MSIM_05100 sthA; putative soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D MSIM_06160 alanine dehydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D MSIM_06170 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D MSIM_21680 pntAB; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D MSIM_21690 pntAa; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D MSIM_06180 pntB_1; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D MSIM_21670 pntB_2; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D MSIM_20400 gabD1; succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:msim00770] D MSIM_08320 ilvB1; acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_15500 acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_20390 putative acetolactate synthase large subunit IlvB K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_22300 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_29640 ilvX; putative acetolactate synthase large subunit IlvX K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_44650 alsS; acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D MSIM_08310 ilvH; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D MSIM_08300 ilvC; ketol-acid reductoisomerase (NADP(+)) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D MSIM_21020 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D MSIM_45440 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D MSIM_03480 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D MSIM_06150 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D MSIM_23620 hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D MSIM_28660 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D MSIM_37270 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D MSIM_28680 coaX; type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D MSIM_02870 coaBC; coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D MSIM_36730 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D MSIM_07930 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D MSIM_00650 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D MSIM_41000 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D MSIM_45740 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MSIM_30070 putative hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D MSIM_28670 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:msim00780] D MSIM_12430 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_20250 fabG4; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_22950 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_31770 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34040 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34210 fabG_3; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34260 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35190 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35590 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35600 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_40200 fabG2; putative oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_01170 bioF1; 8-amino-7-oxononanoate synthase 1 K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D MSIM_01180 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D MSIM_01160 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D MSIM_01100 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D MSIM_13570 birA; biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:msim00785] D MSIM_45640 lipB; octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D MSIM_45630 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_07830 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MSIM_45200 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D MSIM_45660 hypothetical protein K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D MSIM_38900 kgd; multifunctional 2-oxoglutarate metabolism enzyme K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D MSIM_34130 bkdA; 2-oxoisovalerate dehydrogenase E1 K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D MSIM_51750 gcvP; putative glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D MSIM_45730 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D MSIM_46520 gcvH_1; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D MSIM_51810 gcvH_2; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:msim00790] D MSIM_28590 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D MSIM_28610 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D MSIM_28620 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D MSIM_28600 folP1; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D MSIM_38570 folP2; inactive dihydropteroate synthase 2 K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D MSIM_05510 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MSIM_41790 folC; dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D MSIM_02550 ribBA; riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D MSIM_24960 trpG; glutamine amidotransferase K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D MSIM_36140 aminodeoxychorismate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D MSIM_30910 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D MSIM_38180 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D MSIM_32880 moaA2; GTP 3',8-cyclase 2 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D MSIM_32820 moaC2; cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D MSIM_32840 moaE2; molybdopterin synthase catalytic subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D MSIM_18170 moeA2; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D MSIM_35010 moeA1; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D MSIM_18990 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D MSIM_41740 mobA; putative molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:msim00670] D MSIM_05510 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MSIM_14280 folD; bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D MSIM_37280 glyA1; serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MSIM_34790 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D MSIM_34800 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D MSIM_45730 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D MSIM_46910 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D MSIM_05520 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D MSIM_05460 thyX; flavin-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D MSIM_34990 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D MSIM_41700 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D MSIM_02860 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D MSIM_12940 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D MSIM_51750 gcvP; putative glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_46520 gcvH_1; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D MSIM_51810 gcvH_2; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D MSIM_19210 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D MSIM_37120 cbs; cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:msim00860] D MSIM_08220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MSIM_17410 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D MSIM_17250 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D MSIM_17380 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D MSIM_17400 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D MSIM_20080 transcriptional regulator K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D MSIM_04790 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D MSIM_04780 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D MSIM_01950 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D MSIM_04770 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D MSIM_17390 hemD; bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D MSIM_06400 cysG; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D MSIM_02290 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D MSIM_02250 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D MSIM_47540 cobIJ; cobalamin biosynthesis protein CobIJ K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131] D MSIM_47560 cobG; precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D MSIM_47500 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D MSIM_34630 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D MSIM_47510 cobK; precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D MSIM_47490 cobL; precorrin-6Y C(5,15)-methyltransferase [decarboxylating] K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D MSIM_47550 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D MSIM_06410 cobB_1; hydrogenobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D MSIM_47600 cobN; cobalamin biosynthesis protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D MSIM_09090 cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D MSIM_09080 cobT_1; cobaltochelatase subunit CobT K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2] D MSIM_39800 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D MSIM_06420 cobO; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D MSIM_06720 cobQ; cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D MSIM_45350 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D MSIM_45770 cobU; adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D MSIM_45750 cobS; adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D MSIM_45760 cobT_2; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D MSIM_45420 hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D MSIM_06430 hypothetical protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D MSIM_34810 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D MSIM_47470 hypothetical protein K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-] D MSIM_51080 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D MSIM_25650 bfrB; ferritin K22336 bfrB; bacterioferritin B [EC:1.16.3.1] D MSIM_31620 mmcO; multicopper oxidase MmcO K22552 mmcO; multicopper oxidase [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:msim00130] D MSIM_16880 menG; demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D MSIM_12280 menF; putative isochorismate synthase MenF K02361 entC; isochorismate synthase [EC:5.4.4.2] D MSIM_16920 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D MSIM_16940 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D MSIM_17060 menE; putative 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D MSIM_17000 menB; 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D MSIM_51650 esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D MSIM_17150 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D MSIM_08290 wrbA; NAD(P)H:quinone oxidoreductase type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:msim00900] D MSIM_04840 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D MSIM_06790 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D MSIM_28870 hypothetical protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D MSIM_36440 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D MSIM_28880 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D MSIM_06770 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D MSIM_37430 ispH1; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_08690 fni; isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D MSIM_05620 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D MSIM_08600 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D MSIM_46150 idsA2; geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D MSIM_37210 short-chain Z-isoprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D MSIM_42840 uppS; decaprenyl diphosphate synthase K14215 E2.5.1.86; trans,polycis-decaprenyl diphosphate synthase [EC:2.5.1.86] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:msim00906] D MSIM_08620 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D MSIM_08610 phytoene dehydrogenase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31] D MSIM_08660 dehydrogenase K09879 crtU; carotenoid phi-ring synthase / carotenoid chi-ring synthase [EC:1.3.99.39 1.3.99.40] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:msim00903] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_28550 monooxygenase K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107] D MSIM_43700 limonene 1,2-monooxygenase K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107] D MSIM_50410 putative monooxygenase (luciferase-like) K14733 limB; limonene 1,2-monooxygenase [EC:1.14.13.107] D MSIM_05340 limonene-1,2-epoxide hydrolase K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8] D MSIM_49820 hypothetical protein K10533 E3.3.2.8; limonene-1,2-epoxide hydrolase [EC:3.3.2.8] D MSIM_15720 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:msim00907] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_09610 oxidoreductase K13775 atuG; citronellol/citronellal dehydrogenase D MSIM_12380 short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase D MSIM_07070 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D MSIM_10890 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D MSIM_05960 ltp1; lipid-transfer protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_12520 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29240 fadA6; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29330 fadA5; steroid 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_31960 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_37930 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D MSIM_02300 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics [PATH:msim01059] D MSIM_45310 epoxide hydrolase K21159 sgcF; epoxide hydrolase C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:msim00523] D MSIM_19350 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D MSIM_11460 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_15310 rmlB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_15320 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D MSIM_36330 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D MSIM_13140 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D MSIM_01840 putative epimerase/dehydratase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25] D MSIM_17130 galE3; UDP-glucose 4-epimerase K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:msim01053] D MSIM_12280 menF; putative isochorismate synthase MenF K02361 entC; isochorismate synthase [EC:5.4.4.2] D MSIM_05990 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D MSIM_42480 mbtI; salicylate synthase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21] D MSIM_42550 mbtA; 2,3-dihydroxybenzoate-AMP ligase K04787 mbtA; mycobactin salicyl-AMP ligase [EC:6.3.2.-] D MSIM_42560 mbtB; phenyloxazoline synthase MbtB K04788 mbtB; mycobactin phenyloxazoline synthetase D MSIM_22760 putative peptide synthetase MbtE K04789 mbtE; mycobactin peptide synthetase MbtE D MSIM_42600 hypothetical protein K04789 mbtE; mycobactin peptide synthetase MbtE D MSIM_22780 putative polyketide synthase MbtC K04790 mbtC; mycobactin polyketide synthetase MbtC D MSIM_42580 polyketide synthase K04790 mbtC; mycobactin polyketide synthetase MbtC D MSIM_22790 putative polyketide synthase MbtD K04791 mbtD; mycobactin polyketide synthetase MbtD D MSIM_42590 mbtD; polyketide synthase K04791 mbtD; mycobactin polyketide synthetase MbtD D MSIM_22750 putative peptide synthetase MbtF K04792 mbtF; mycobactin peptide synthetase MbtF D MSIM_42610 non-ribosomal peptide synthetase K04792 mbtF; mycobactin peptide synthetase MbtF D MSIM_42620 mbtG; L-lysine N6-monooxygenase MbtG K04793 mbtG; mycobactin lysine-N-oxygenase C 01055 Biosynthesis of vancomycin group antibiotics [PATH:msim01055] D MSIM_11460 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_15310 rmlB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_05540 glycosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:msim00946] D MSIM_21050 bglS; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism D MSIM_29140 nat; arylamine N-acetyltransferase K00622 nat; arylamine N-acetyltransferase [EC:2.3.1.5] C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis [PATH:msim00311] D MSIM_40750 aao_1; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D MSIM_50640 aao_2; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D MSIM_05860 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:msim00332] D MSIM_41860 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D MSIM_42020 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:msim00261] D MSIM_42630 mbtH; protein MbtH K05375 mbtH; MbtH protein D MSIM_38360 adenylyl-sulfate kinase K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D MSIM_39440 cysNC; bifunctional enzyme CysN/CysC K00955 cysNC; bifunctional enzyme CysN/CysC [EC:2.7.7.4 2.7.1.25] D MSIM_38370 sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MSIM_39430 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D MSIM_27380 ask; aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D MSIM_27390 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D MSIM_03510 putative dihydrodipicolinate synthetase DapA K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MSIM_05450 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MSIM_40380 hypothetical protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D MSIM_05710 dapB_1; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D MSIM_05760 dapB_2; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:msim00521] D MSIM_16360 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] D MSIM_09910 pgmA; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D MSIM_24360 hypothetical protein K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D MSIM_00960 impA; putative inositol 1-monophosphatase ImpA K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D MSIM_04980 suhB; inositol-1-monophosphatase SuhB K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D MSIM_24190 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D MSIM_19350 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D MSIM_11460 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_15310 rmlB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_15320 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D MSIM_36330 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D MSIM_13140 rmlD; NAD(P)-dependent oxidoreductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D MSIM_16360 sugar kinase K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:msim00525] D MSIM_19350 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D MSIM_11460 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D MSIM_15310 rmlB1; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:msim00401] D MSIM_26550 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D MSIM_01000 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_15470 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_26310 pat; putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_45390 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D MSIM_00890 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D MSIM_16370 fabD2; malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MSIM_45180 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MSIM_12430 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_20250 fabG4; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_22950 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_31770 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34040 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34210 fabG_3; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34260 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35190 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35590 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35600 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_40200 fabG2; putative oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D MSIM_40080 mbtL; acyl carrier protein MbtL K02078 acpP; acyl carrier protein D MSIM_45170 acpM; meromycolate extension acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:msim00999] D MSIM_02860 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D MSIM_21050 bglS; beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites D MSIM_08600 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D MSIM_46150 idsA2; geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:msim00362] D MSIM_09790 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D MSIM_20630 putative hydrolase, alpha/beta fold protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D MSIM_05960 ltp1; lipid-transfer protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_12520 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29240 fadA6; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29330 fadA5; steroid 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_31960 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_37930 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29430 hsaE; hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D MSIM_29450 bphI-2; 4-hydroxy-2-oxovalerate aldolase 2 K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D MSIM_29440 mhpF; acetaldehyde dehydrogenase 2 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D MSIM_44860 6-chlorohydroxyquinol-1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D MSIM_30280 pcaC_1; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D MSIM_32190 hypothetical protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D MSIM_51260 reductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3] D MSIM_26990 3-oxoacyl-ACP reductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D MSIM_32280 3-oxoacyl-ACP reductase K07535 badH; 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D MSIM_18720 fadE7; acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_12460 putative dehydrogenase (3-hydroxybutyryl-CoA dehydrogenase FadB?) K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D MSIM_17830 fadB2; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:msim00627] D MSIM_25530 ethA; FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-] D MSIM_46440 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D MSIM_46430 nitrile hydratase K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D MSIM_06940 amiC; putative amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_39080 amiB2; putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_42810 amiA2; putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_20980 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D MSIM_07610 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D MSIM_31180 mdlC_1; benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7] D MSIM_40580 benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7] D MSIM_46620 mdlC_2; benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:msim00364] D MSIM_05530 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_36940 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_47630 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_50930 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_46440 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D MSIM_46430 nitrile hydratase K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] C 00625 Chloroalkane and chloroalkene degradation [PATH:msim00625] D MSIM_26840 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_43640 dhmA2_1; haloalkane dehalogenase 2 K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_44440 dhmA1; haloalkane dehalogenase 1 K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_48750 dhmA; haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_48890 dhmA2_2; haloalkane dehalogenase 2 K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_48960 dhmA2_3; haloalkane dehalogenase 2 K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_09660 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_51380 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_30180 adhB; alcohol dehydrogenase B K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D MSIM_10390 putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_20520 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_21740 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_22290 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_30250 aldA_1; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35080 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_35440 aldA_2; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_37920 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_38480 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40940 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_43510 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D MSIM_40490 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] D MSIM_30670 dehII; haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D MSIM_44950 putative HAD-superfamily hydrolase YfnB K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:msim00361] D MSIM_26840 haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_43640 dhmA2_1; haloalkane dehalogenase 2 K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_44440 dhmA1; haloalkane dehalogenase 1 K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_48750 dhmA; haloalkane dehalogenase K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_48890 dhmA2_2; haloalkane dehalogenase 2 K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_48960 dhmA2_3; haloalkane dehalogenase 2 K01563 dhaA; haloalkane dehalogenase [EC:3.8.1.5] D MSIM_05530 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_36940 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_47630 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_50930 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_44860 6-chlorohydroxyquinol-1,2-dioxygenase K04098 chqB; hydroxyquinol 1,2-dioxygenase [EC:1.13.11.37] D MSIM_49230 2,4-dichlorophenol 6-monooxygenase K10676 tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20] D MSIM_30670 dehII; haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D MSIM_44950 putative HAD-superfamily hydrolase YfnB K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2] D MSIM_40490 alpha/beta hydrolase K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:msim00623] D MSIM_33930 CoA transferase K07544 bbsF; benzylsuccinate CoA-transferase BbsF subunit [EC:2.8.3.15] D MSIM_05530 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_36940 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_47630 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D MSIM_50930 hypothetical protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:msim00622] D MSIM_50150 aldehyde dehydrogenase K10618 cymC; p-cumic aldehyde dehydrogenase D MSIM_29430 hsaE; hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D MSIM_29450 bphI-2; 4-hydroxy-2-oxovalerate aldolase 2 K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D MSIM_29440 mhpF; acetaldehyde dehydrogenase 2 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:msim00633] D MSIM_53060 putative NADH-dependent flavin oxidoreductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D MSIM_06530 hydrogenase K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D MSIM_06520 hydrogenase expression protein HypE K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D MSIM_29140 nat; arylamine N-acetyltransferase K00622 nat; arylamine N-acetyltransferase [EC:2.3.1.5] C 00642 Ethylbenzene degradation D MSIM_05960 ltp1; lipid-transfer protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_12520 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29240 fadA6; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29330 fadA5; steroid 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_31960 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_37930 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:msim00643] D MSIM_43950 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39] D MSIM_10860 hmgA; hypothetical protein K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5] D MSIM_46440 nthA; nitrile hydratase subunit alpha K01721 nthA; nitrile hydratase subunit alpha [EC:4.2.1.84] D MSIM_46430 nitrile hydratase K20807 nthB; nitrile hydratase subunit beta [EC:4.2.1.84] D MSIM_06940 amiC; putative amidase AmiC K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_39080 amiB2; putative amidase AmiB2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_42810 amiA2; putative amidase AmiA2 K01426 E3.5.1.4; amidase [EC:3.5.1.4] D MSIM_20980 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] C 00791 Atrazine degradation D MSIM_51620 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D MSIM_51630 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D MSIM_51640 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:msim00930] D MSIM_12980 alkB; alkane 1-monooxygenase AlkB K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3] D MSIM_21360 monooxygenase K03379 chnB; cyclohexanone monooxygenase [EC:1.14.13.22] D MSIM_22330 monooxygenase K03379 chnB; cyclohexanone monooxygenase [EC:1.14.13.22] D MSIM_34020 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D MSIM_15720 esterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D MSIM_40190 acyl-CoA dehydrogenase K06446 DCAA; acyl-CoA dehydrogenase [EC:1.3.99.-] D MSIM_02110 echA12; putative enoyl-CoA hydratase echA12 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_08820 echA17; putative enoyl-CoA hydratase echA17 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_37060 echA8; putative enoyl-CoA hydratase echA8 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_41350 echA14; putative enoyl-CoA hydratase echA14 K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D MSIM_32650 fadB; fatty oxidation protein FadB K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation D MSIM_50750 monooxygenase K14520 hapE; 4-hydroxyacetophenone monooxygenase [EC:1.14.13.84] C 00621 Dioxin degradation [PATH:msim00621] D MSIM_29430 hsaE; hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D MSIM_29450 bphI-2; 4-hydroxy-2-oxovalerate aldolase 2 K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D MSIM_29440 mhpF; acetaldehyde dehydrogenase 2 K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00626 Naphthalene degradation [PATH:msim00626] D MSIM_09660 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_51380 adhA; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D MSIM_30180 adhB; alcohol dehydrogenase B K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation [PATH:msim00984] D MSIM_14610 choD; cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6] D MSIM_37390 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase K16045 hsd; 3beta-hydroxy-Delta5-steroid dehydrogenase / steroid Delta-isomerase [EC:1.1.1.145 5.3.3.1] D MSIM_21650 cytochrome P450 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D MSIM_29340 cytochrome P450 steroid C27-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D MSIM_43540 cytochrome P450 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D MSIM_50820 linalool 8-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D MSIM_29590 cyp142; putative cytochrome P450 142 K16046 CYP142; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.28] D MSIM_48400 cytochrome P450 K16046 CYP142; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.28] D MSIM_04310 acyl-CoA synthetase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42] D MSIM_29610 fadD19; long-chain-fatty-acid--CoA/3-oxocholest-4-en-26-o ate--CoA ligase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42] D MSIM_40420 acyl-CoA synthetase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42] D MSIM_40500 acyl-CoA synthetase K18688 fadD19; 3-oxocholest-4-en-26-oate---CoA ligase [EC:6.2.1.42] D MSIM_32600 far; fatty-acid-CoA racemase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D MSIM_38010 mcr; alpha-methylacyl-CoA racemase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D MSIM_29690 fadE26; acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-] D MSIM_35420 acyl-CoA dehydrogenase K22818 fadE26; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-] D MSIM_29680 fadE27; acyl-CoA dehydrogenase FadE27 K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-] D MSIM_35390 putative acyl-CoA dehydrogenase K22819 fadE27; 3-oxocholest-4-en-26-oyl-CoA dehydrogenase beta subunit [EC:1.3.99.-] D MSIM_05960 ltp1; lipid-transfer protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_12520 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29240 fadA6; acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29330 fadA5; steroid 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_31960 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_37930 acyl-CoA dehydrogenase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D MSIM_29040 fadE34; acyl-CoA dehydrogenase K22820 fadE34; 3-oxochol-4-en-24-oyl-CoA dehydrogenase [EC:1.3.99.-] D MSIM_29410 dehydrogenase K28218 chsH3; 3-oxochol-4,22-dien-24-oyl-CoA hydratase (S-form) [EC:4.2.1.-] D MSIM_29710 3-oxoacyl-ACP reductase K28219 chsB1; (22S)-hydroxy-3-oxochol-4-en-24-oyl-CoA dehydrogenase [EC:1.1.1.-] D MSIM_29350 fadE28; acyl-CoA dehydrogenase K22821 fadE28; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase alpha subunit [EC:1.3.99.-] D MSIM_29360 fadE29; acyl-CoA dehydrogenase FadE29 K22822 fadE29; 3-oxo-4-pregnene-20-carboxyl-CoA dehydrogenase beta subunit [EC:1.3.99.-] D MSIM_29370 hypothetical protein K25621 chsH2; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase alpha subunit [EC:4.2.1.-] D MSIM_29380 hypothetical protein K25622 chsH1; 3-oxo-4,17-pregnadiene-20-carboxyl-CoA hydratase beta subunit [EC:4.2.1.-] D MSIM_29390 ltp2; lipid-transfer protein K25623 ltp2; 17-hydroxy-3-oxo-4-pregnene-20-carboxyl-CoA lyase [EC:4.1.3.-] D MSIM_29530 hypothetical protein K01822 ksi; steroid Delta-isomerase [EC:5.3.3.1] D MSIM_30160 hypothetical protein K01822 ksi; steroid Delta-isomerase [EC:5.3.3.1] D MSIM_39510 hypothetical protein K01822 ksi; steroid Delta-isomerase [EC:5.3.3.1] D MSIM_13580 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D MSIM_29420 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D MSIM_31540 3-ketosteroid-delta-1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D MSIM_52410 3-oxosteroid 1-dehydrogenase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4] D MSIM_05770 (2Fe-2S) ferredoxin K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D MSIM_29510 3-ketosteroid-9-alpha-monooxygenase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D MSIM_53050 3-ketosteroid-9-alpha-hydroxylase oxygenase subunit K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30] D MSIM_29080 hmp; 3-ketosteroid-9-alpha-monooxygenase, ferredoxin reductase component K15983 kshB; 3-ketosteroid 9alpha-monooxygenase subunit B [EC:1.14.15.30] D MSIM_29090 oxidoreductase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] D MSIM_53010 hydroxylase K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] D MSIM_29120 oxidoreductase K16048 hsaB; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase reductase component [EC:1.5.1.-] D MSIM_29110 hsaC; iron-dependent extradiol dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D MSIM_53020 biphenyl-2,3-diol 1,2-dioxygenase K16049 hsaC; 3,4-dihydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione 4,5-dioxygenase [EC:1.13.11.25] D MSIM_29100 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1 (10),2-diene-4-oate hydrolase K16050 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase [EC:3.7.1.17] D MSIM_29200 fadD3; 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] D MSIM_32550 fatty acid--CoA ligase K18687 fadD3; HIP---CoA ligase [EC:6.2.1.41] D MSIM_29220 oxidoreductase K28220 scdG; hydroxylacyl dehydrogenase [EC:1.1.-.-] D MSIM_29170 fadE33; acyl-CoA dehydrogenase K28221 scdC1; 5OH-HIP-CoA dehydrogenase [EC:1.3.99.-] D MSIM_29210 fadE30; acyl-CoA dehydrogenase K28222 scdC2; 5OH-HIP-CoA dehydrogenase [EC:1.3.99.-] D MSIM_22070 putative enoyl-CoA hydratase 1 K28224 scdD; enoyl-CoA hydratase [EC:4.2.1.-] D MSIM_35460 putative enoyl-CoA hydratase 1 K28224 scdD; enoyl-CoA hydratase [EC:4.2.1.-] D MSIM_29300 short-chain dehydrogenase K28225 scdE; 3-hydroxyl acyl-CoA dehydrogenase [EC:1.1.-.-] D MSIM_29250 oxidoreductase K28226 scdK; acyl-CoA dehydrogenase [EC:1.3.99.-] D MSIM_29280 enoyl-CoA hydratase K28227 scdY; HIEC-CoA hydrolase [EC:4.1.-.-] D MSIM_29270 CoA-transferase K28228 scdL1; COCHEA-CoA hydrolase alpha subunit [EC:4.1.-.-] D MSIM_29260 CoA-transferase K28229 scdL2; COCHEA-CoA hydrolase beta subunit [EC:4.1.-.-] D MSIM_29190 fadE31; acyl-CoA dehydrogenase K28230 scdM1; acyl-CoA dehydrogenase [EC:1.3.99.-] D MSIM_29180 fadE32; acyl-CoA dehydrogenase K28231 scdM2; acyl-CoA dehydrogenase [EC:1.3.99.-] D MSIM_29850 enoyl-CoA hydratase K28232 scdN; enoyl-CoA hydratase [EC:4.2.1.-] D MSIM_35840 echA13; putative enoyl-CoA hydratase EchA13 K28232 scdN; enoyl-CoA hydratase [EC:4.2.1.-] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes [PATH:msim00983] D MSIM_28400 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D MSIM_14620 guaB3; putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D MSIM_14630 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D MSIM_14540 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D MSIM_40050 rdgB; non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D MSIM_13990 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D MSIM_13980 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D MSIM_41810 ndkA; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MSIM_04940 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MSIM_49980 katG2; catalase-peroxidase 2 K03782 katG; catalase-peroxidase [EC:1.11.1.21] D MSIM_29140 nat; arylamine N-acetyltransferase K00622 nat; arylamine N-acetyltransferase [EC:2.3.1.5] B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:msim03020] D MSIM_16300 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MSIM_16290 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MSIM_15220 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MSIM_02880 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D MSIM_32790 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:msim03010] D MSIM_00660 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MSIM_06960 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MSIM_15920 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MSIM_15230 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D MSIM_15750 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MSIM_24170 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D MSIM_16190 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D MSIM_15780 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MSIM_15070 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D MSIM_15990 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MSIM_15240 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D MSIM_16200 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MSIM_15250 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D MSIM_15790 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14 D MSIM_22520 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MSIM_05900 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MSIM_07400 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MSIM_15890 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MSIM_22530 rpsR2; 30S ribosomal protein S18 2 K02963 RP-S18; small subunit ribosomal protein S18 D MSIM_24150 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D MSIM_15940 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MSIM_42230 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D MSIM_16490 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MSIM_15950 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MSIM_15980 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MSIM_15970 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MSIM_15800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MSIM_15770 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D MSIM_16340 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MSIM_24140 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D MSIM_16350 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D MSIM_16500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MSIM_15080 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MSIM_15820 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MSIM_15730 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MSIM_15910 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MSIM_15210 hypothetical protein K02879 RP-L17; large subunit ribosomal protein L17 D MSIM_15760 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MSIM_07350 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MSIM_00350 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MSIM_41830 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MSIM_15930 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MSIM_15960 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MSIM_15810 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MSIM_36470 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D MSIM_41840 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D MSIM_08050 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MSIM_22500 rpmB2; 50S ribosomal protein L28-2 K02902 RP-L28; large subunit ribosomal protein L28 D MSIM_15900 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D MSIM_15740 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D MSIM_39650 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MSIM_34910 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MSIM_16560 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D MSIM_22510 rpmG1; 50S ribosomal protein L33 1 K02913 RP-L33; large subunit ribosomal protein L33 D MSIM_25110 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MSIM_00360 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MSIM_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MSIM_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:msim00970] D MSIM_t00090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MSIM_t00200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MSIM_t00350 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MSIM_t00240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MSIM_t00340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MSIM_t00390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MSIM_t00430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MSIM_t00470 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MSIM_t00320 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MSIM_t00040 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MSIM_t00490 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MSIM_t00070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MSIM_t00360 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MSIM_t00060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MSIM_t00310 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MSIM_t00030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MSIM_t00170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MSIM_t00450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MSIM_t00420 tRNA-His K14226 tRNA-His; tRNA His D MSIM_t00210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MSIM_t00010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00190 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00300 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MSIM_t00410 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MSIM_t00100 tRNA-Met K14230 tRNA-Met; tRNA Met D MSIM_t00130 tRNA-Met K14230 tRNA-Met; tRNA Met D MSIM_t00480 tRNA-Met K14230 tRNA-Met; tRNA Met D MSIM_t00330 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MSIM_t00270 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MSIM_t00460 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MSIM_t00520 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MSIM_t00220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MSIM_t00230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MSIM_t00250 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MSIM_t00260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MSIM_t00140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MSIM_t00280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MSIM_t00290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MSIM_t00120 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MSIM_t00150 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MSIM_t00020 tRNA-Val K14237 tRNA-Val; tRNA Val D MSIM_t00050 tRNA-Val K14237 tRNA-Val; tRNA Val D MSIM_t00500 tRNA-Val K14237 tRNA-Val; tRNA Val D MSIM_t00180 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D MSIM_08220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MSIM_03070 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D MSIM_08390 gatA_1; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D MSIM_08360 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D MSIM_08400 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D MSIM_03340 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MSIM_03470 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MSIM_42880 glyQS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MSIM_04190 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MSIM_25730 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MSIM_23310 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D MSIM_28890 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MSIM_36400 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MSIM_02640 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D MSIM_11830 putative formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D MSIM_41780 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MSIM_24480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MSIM_01490 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MSIM_00380 lysX; lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MSIM_28690 lysS1; lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MSIM_39590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MSIM_06380 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MSIM_03810 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MSIM_00300 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MSIM_00290 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MSIM_54140 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MSIM_14150 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes [PATH:msim03008] D MSIM_07670 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D MSIM_41200 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:msim03060] D MSIM_15550 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MSIM_16520 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MSIM_02380 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D MSIM_03890 hypothetical protein K03072 secD; preprotein translocase subunit SecD D MSIM_03880 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D MSIM_03900 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D MSIM_25140 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MSIM_12820 secA1; protein translocase subunit SecA 1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MSIM_51860 secA2; protein translocase subunit SecA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MSIM_07530 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MSIM_07590 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D MSIM_46020 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D MSIM_47250 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D MSIM_38720 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D MSIM_47260 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC D MSIM_07340 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D MSIM_01430 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum [PATH:msim04141] D MSIM_44240 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D MSIM_11740 hsp18; 18 kDa antigen K13993 HSP20; HSP20 family protein D MSIM_20130 hsp; heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D MSIM_23940 18 kDa antigen (HSP 16.7) K13993 HSP20; HSP20 family protein C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:msim04122] D MSIM_08500 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MSIM_13620 sseA; putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_30960 cysA2; thiosulfate sulfurtransferase CysA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_44610 sseB; putative thiosulfate sulfurtransferase SseB K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D MSIM_08490 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D MSIM_32840 moaE2; molybdopterin synthase catalytic subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D MSIM_32880 moaA2; GTP 3',8-cyclase 2 K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D MSIM_32870 moaD2; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D MSIM_12170 moeZ; putative adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-] D MSIM_32820 moaC2; cyclic pyranopterin monophosphate synthase accessory protein 2 K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D MSIM_18530 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein D MSIM_39990 mec; CysO-cysteine peptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6] C 03050 Proteasome [PATH:msim03050] D MSIM_47150 mpa; proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase D MSIM_47210 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D MSIM_47200 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:msim03018] D MSIM_41820 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D MSIM_36760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MSIM_05890 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MSIM_38950 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MSIM_43790 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D MSIM_39640 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D MSIM_05440 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D MSIM_19180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MSIM_14830 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_18110 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_49500 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_08150 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D MSIM_12750 ppk2; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D MSIM_25300 pcnA; CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] B B 09124 Replication and repair C 03030 DNA replication [PATH:msim03030] D MSIM_27330 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_45940 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_01360 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MSIM_27190 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MSIM_28280 DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MSIM_42220 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MSIM_25090 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MSIM_24130 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MSIM_42960 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D MSIM_24160 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_41500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_45420 hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D MSIM_07330 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D MSIM_00680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D MSIM_08450 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:msim03410] D MSIM_27990 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D MSIM_08090 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D MSIM_28790 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D MSIM_54150 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D MSIM_00640 mutM_1; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MSIM_07660 mutM_2; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MSIM_34640 putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MSIM_13720 nei2; endonuclease 8 2 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D MSIM_41640 nei1; endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D MSIM_39830 alkA; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D MSIM_38600 tagA; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D MSIM_33180 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D MSIM_11580 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D MSIM_39020 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D MSIM_18340 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D MSIM_16280 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D MSIM_00680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D MSIM_08450 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:msim03420] D MSIM_36720 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D MSIM_00490 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D MSIM_00560 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D MSIM_02500 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D MSIM_12070 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_12110 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_34690 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_00680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D MSIM_08450 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MSIM_32790 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:msim03430] D MSIM_12070 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_12110 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_34690 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_37410 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D MSIM_37400 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D MSIM_24160 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_41500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_01360 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MSIM_25090 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MSIM_27190 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MSIM_42220 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MSIM_28280 DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MSIM_27330 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_45940 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_08450 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:msim03440] D MSIM_24160 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_41500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_25080 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D MSIM_42830 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D MSIM_27290 recR; recombination protein RecR K06187 recR; recombination protein RecR D MSIM_05300 recA; protein RecA K03553 recA; recombination protein RecA D MSIM_00680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D MSIM_03960 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D MSIM_03950 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MSIM_03970 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D MSIM_08030 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D MSIM_01360 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MSIM_25090 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MSIM_27190 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MSIM_42220 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MSIM_28280 DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MSIM_27330 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_45940 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_02780 priA_2; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining [PATH:msim03450] D MSIM_34490 mku; non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku D MSIM_00630 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D MSIM_34550 ligD; multifunctional non-homologous end joining protein LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:msim03250] D MSIM_25000 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus and Alphavirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03273 Virion - Lassa virus and SFTS virus C 03272 Virion - Hepatitis viruses C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:msim02010] D MSIM_42370 subI; sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D MSIM_42380 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D MSIM_42390 cysW; sulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D MSIM_42400 cysA; sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D MSIM_03170 putative nitrate ABC transporter, periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_23240 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_23730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_32730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_03160 putative nitrate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D MSIM_23220 sulfate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D MSIM_23720 putative nitrate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D MSIM_32750 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D MSIM_03150 putative nitrate ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_23230 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_23710 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_32740 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_51430 modA; molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D MSIM_51420 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D MSIM_51410 modC; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D MSIM_26500 proX; glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D MSIM_26520 proW; ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D MSIM_26530 proZ; ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D MSIM_26510 proV; proline/glycine betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D MSIM_38820 sugC; trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D MSIM_47980 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D MSIM_38790 lpqY; hypothetical protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D MSIM_38800 sugA; trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein D MSIM_38810 sugB; trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein D MSIM_21230 mce1F; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21240 lprK; lipoprotein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21250 mce1D; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21260 mce1C; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21270 mce1B; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21280 mce1A; cell invasion protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29740 mce4A; Mce family protein Mce4A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29750 mce4B; Mce family protein Mce4B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29760 mce4C; Mce family protein Mce4C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29770 mce4D; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29780 lprN; hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29790 mce4F; Mce family protein Mce4 K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_30850 mce2A; Mce family protein Mce2A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32330 virulence factor K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32340 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32350 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32360 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32370 virulence factor Mce K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32380 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43050 mce3A; MCE-family protein MCE3A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43060 mce3B; Mce family protein Mce3B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43070 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43080 mce3D; Mce family protein Mce3D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43090 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43100 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_46970 putative Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_46980 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_46990 putative MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_47000 putative MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_47010 putative MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_47020 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21290 yrbE1B; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_21300 yrbE1A; membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_29720 yrbE4A; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_29730 yrbE4B; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_32310 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_32320 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_43030 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_43040 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_47030 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_47040 ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_16310 mkl; putative ribonucleotide transport ATP-binding protein mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D MSIM_15850 pstS3_1; phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D MSIM_31020 phoS3; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D MSIM_34460 pstS3_2; phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D MSIM_49030 pstS2; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D MSIM_31030 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D MSIM_34470 pstC2; phosphate transport system permease protein PstC 2 K02037 pstC; phosphate transport system permease protein D MSIM_31040 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D MSIM_34480 pstA1; phosphate transport system permease protein PstA 1 K02038 pstA; phosphate transport system permease protein D MSIM_31050 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D MSIM_24290 phnD; phosphate-import protein PhnD K02044 phnD; phosphonate transport system substrate-binding protein D MSIM_24270 phnE; phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D MSIM_24280 phnC; phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D MSIM_37880 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D MSIM_28090 dppA; peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D MSIM_28100 dppB; peptide ABC transporter K15581 oppB; oligopeptide transport system permease protein D MSIM_28110 dppC; peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D MSIM_28120 dppD; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D MSIM_39300 hypothetical protein K13889 gsiB; glutathione transport system substrate-binding protein D MSIM_39330 peptide ABC transporter permease K13890 gsiC; glutathione transport system permease protein D MSIM_39320 putative peptide transport permease protein K13891 gsiD; glutathione transport system permease protein D MSIM_39310 putative ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D MSIM_43260 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D MSIM_26180 sugar ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D MSIM_26200 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D MSIM_10710 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D MSIM_10720 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D MSIM_40140 irtA; iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D MSIM_40150 irtB; iron import ATP-binding/permease protein IrtB K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D MSIM_39220 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D MSIM_00780 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D MSIM_00770 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D MSIM_51880 bacA; vitamin B12 transport ATP-binding protein BacA K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:msim03070] D MSIM_03890 hypothetical protein K03072 secD; preprotein translocase subunit SecD D MSIM_03880 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D MSIM_16520 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MSIM_02380 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D MSIM_15550 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MSIM_03900 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D MSIM_25140 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MSIM_12820 secA1; protein translocase subunit SecA 1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MSIM_51860 secA2; protein translocase subunit SecA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MSIM_07590 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D MSIM_07530 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MSIM_47250 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D MSIM_38720 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D MSIM_47260 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:msim02020] D MSIM_17640 senX3; sensor-like histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D MSIM_17630 regX3; sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D MSIM_15850 pstS3_1; phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D MSIM_31020 phoS3; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D MSIM_34460 pstS3_2; phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D MSIM_49030 pstS2; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D MSIM_38710 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D MSIM_36810 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D MSIM_36800 kdpE; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D MSIM_36840 kdpA; potassium-transporting ATPase potassium-binding subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D MSIM_36830 kdpB; potassium-transporting ATPase ATP-binding subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D MSIM_36820 kdpC; potassium-transporting ATPase KdpC subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D MSIM_02250 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D MSIM_34930 mprB; signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D MSIM_34920 mprA; response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D MSIM_34940 serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D MSIM_12910 mtrB; sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D MSIM_12920 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D MSIM_25100 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MSIM_23280 two-component sensor histidine kinase K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D MSIM_33110 prrB; sensor-type histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D MSIM_33120 prrA_2; transcriptional regulatory protein PrrA K07671 prrA; two-component system, OmpR family, response regulator PrrA D MSIM_36850 trcS; two-component sensor histidine kinase K07656 trcS; two-component system, OmpR family, sensor histidine kinase TrcS [EC:2.7.13.3] D MSIM_36860 trcR; DNA-binding response regulator K07672 trcR; two-component system, OmpR family, response regulator TrcR D MSIM_31300 lpqR; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D MSIM_09700 citE_1; citrate lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D MSIM_26720 malyl-CoA lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D MSIM_41320 citE_2; citrate lyase subunit beta-like protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D MSIM_38860 putative malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D MSIM_43140 mez; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D MSIM_48390 oxalate/formate MFS antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D MSIM_31470 narL; putative transcriptional regulatory protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D MSIM_48260 diguanylate cyclase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D MSIM_48250 devR; transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR D MSIM_28160 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D MSIM_28170 hypothetical protein K12510 tadB; tight adherence protein B D MSIM_28180 hypothetical protein K12511 tadC; tight adherence protein C D MSIM_07560 glnD; bifunctional uridylyltransferase/uridylyl-removing enzyme K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D MSIM_07570 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D MSIM_28420 glnT; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45490 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45600 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51050 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51550 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_53180 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_50360 atoE; short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_06520 hydrogenase expression protein HypE K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D MSIM_06530 hydrogenase K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D MSIM_11310 cheR; chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D MSIM_11300 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D MSIM_11330 cheB; chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D MSIM_12860 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_27970 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_48380 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_00750 cydA; cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D MSIM_00760 cydB; cytochrome c oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D MSIM_45370 ptpA; putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D MSIM_23800 celA1; glucanase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04082 Neuroactive ligand signaling C 04081 Hormone signaling C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome D MSIM_23790 sulfatase-modifying factor 1 K13444 SUMF1; formylglycine-generating enzyme [EC:1.8.3.7] C 04146 Peroxisome [PATH:msim04146] D MSIM_32600 far; fatty-acid-CoA racemase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D MSIM_38010 mcr; alpha-methylacyl-CoA racemase K01796 AMACR; alpha-methylacyl-CoA racemase [EC:5.1.99.4] D MSIM_43200 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6] D MSIM_35640 hypothetical protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_43580 AMP-dependent ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_45990 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_12090 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D MSIM_45100 flavoprotein K00803 AGPS; alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] D MSIM_40750 aao_1; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D MSIM_50640 aao_2; amino acid oxidase K00273 DAO; D-amino-acid oxidase [EC:1.4.3.3] D MSIM_14170 icd2; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D MSIM_07070 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D MSIM_10890 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D MSIM_04380 srpA; catalase-related peroxidase K03781 katE; catalase [EC:1.11.1.6] D MSIM_23170 catalase-related peroxidase K03781 katE; catalase [EC:1.11.1.6] D MSIM_27440 katA; catalase K03781 katE; catalase [EC:1.11.1.6] D MSIM_18290 sodC; superoxide dismutase [Cu-Zn] K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D MSIM_42950 hypothetical protein K04565 SOD1; superoxide dismutase, Cu-Zn family [EC:1.15.1.1] D MSIM_25620 sodA; superoxide dismutase [Mn] K04564 SOD2; superoxide dismutase, Fe-Mn family [EC:1.15.1.1] C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D MSIM_25870 hypothetical protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:msim02024] D MSIM_00890 trpE; anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D MSIM_46080 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D MSIM_48710 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D MSIM_36800 kdpE; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D MSIM_14910 gadB; glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D MSIM_37880 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D MSIM_35640 hypothetical protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_43580 AMP-dependent ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_45990 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_12860 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_27970 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_48380 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_02610 ribG; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D MSIM_00670 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D MSIM_28090 dppA; peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D MSIM_28100 dppB; peptide ABC transporter K15581 oppB; oligopeptide transport system permease protein D MSIM_28110 dppC; peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D MSIM_28120 dppD; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D MSIM_03870 putative lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D MSIM_25140 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MSIM_16520 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MSIM_02380 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D MSIM_15550 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MSIM_03900 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D MSIM_12820 secA1; protein translocase subunit SecA 1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MSIM_51860 secA2; protein translocase subunit SecA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MSIM_07590 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D MSIM_07530 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:msim02030] D MSIM_11300 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D MSIM_11330 cheB; chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D MSIM_11310 cheR; chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] C 02040 Flagellar assembly D MSIM_05000 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D MSIM_36760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04981 Folate transport and metabolism [PATH:msim04981] D MSIM_34990 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] D MSIM_05510 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D MSIM_37280 glyA1; serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D MSIM_05520 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D MSIM_41700 mmuM; homocysteine S-methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10] D MSIM_46910 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04980 Cobalamin transport and metabolism [PATH:msim04980] D MSIM_39800 Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D MSIM_01860 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-] D MSIM_31450 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-] D MSIM_01870 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_01880 mutA; putative methylmalonyl-CoA mutase small subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D MSIM_46910 5-methyltetrahydrofolate--homocysteine methyltransferase MetH K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation C 04382 Cornified envelope formation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis [PATH:msim05152] D MSIM_25780 putative Rieske 2Fe-2S iron-sulfur protein K14952 namH; UDP-MurNAc hydroxylase D MSIM_26390 lpqH_1; lipoprotein LpqH K14953 lpqH; ipoprotein LpqH D MSIM_27130 putative lipoprotein K14953 lpqH; ipoprotein LpqH D MSIM_29940 lpqH_2; lipoprotein LpqH K14953 lpqH; ipoprotein LpqH D MSIM_02590 lprG; lipoarabinomannan carrier protein LprG K14954 lprG; lipoprotein LprG D MSIM_39190 lprA; lipoprotein LprA K14955 lprA; lipoprotein LprA D MSIM_15850 pstS3_1; phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D MSIM_31020 phoS3; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D MSIM_34460 pstS3_2; phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D MSIM_49030 pstS2; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D MSIM_19180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MSIM_14830 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_18110 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_49500 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_15090 esxT; ESAT-6-like protein EsxT K14956 esx; ESAT-6 family protein D MSIM_15100 esxU; ESAT-6-like protein EsxU K14956 esx; ESAT-6 family protein D MSIM_17430 esxF; ESAT-6-like protein EsxF K14956 esx; ESAT-6 family protein D MSIM_17440 esxE; secretion protein K14956 esx; ESAT-6 family protein D MSIM_19820 esxH; ESAT-6-like protein EsxH K14956 esx; ESAT-6 family protein D MSIM_19830 esxG; type VII secretion system protein EsxS K14956 esx; ESAT-6 family protein D MSIM_25320 hypothetical protein K14956 esx; ESAT-6 family protein D MSIM_25330 hypothetical protein K14956 esx; ESAT-6 family protein D MSIM_36870 esxN_1; ESAT-6-like protein EsxN K14956 esx; ESAT-6 family protein D MSIM_36880 esxP_1; ESAT-6-like protein EsxP K14956 esx; ESAT-6 family protein D MSIM_49620 esxN_2; ESAT-6-like protein EsxN K14956 esx; ESAT-6 family protein D MSIM_52100 esxN_3; ESAT-6-like protein EsxN K14956 esx; ESAT-6 family protein D MSIM_52110 esxP_2; ESAT-6-like protein EsxP K14956 esx; ESAT-6 family protein D MSIM_13880 acid phosphatase K21302 sapM; phosphatidylinositol-3-phosphatase [EC:3.1.3.64] D MSIM_18590 pknG; serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:msim01501] D MSIM_20290 lpqI; hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D MSIM_28090 dppA; peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D MSIM_28100 dppB; peptide ABC transporter K15581 oppB; oligopeptide transport system permease protein D MSIM_28110 dppC; peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D MSIM_28120 dppD; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D MSIM_51670 blaR; hypothetical protein K02172 blaR1; bla regulator protein blaR1 D MSIM_51660 blaI; transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D MSIM_05860 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D MSIM_46230 pbpB; penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:msim01502] D MSIM_31300 lpqR; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D MSIM_08120 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MSIM_14900 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D MSIM_46280 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D MSIM_46290 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MSIM_46320 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:msim01503] D MSIM_25200 cwlM; N-acetylmuramoyl-L-alanine amidase CwlM K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MSIM_27270 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MSIM_44940 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MSIM_38710 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D MSIM_25000 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:msim01000] C 01001 Protein kinases [BR:msim01001] D MSIM_18590 pknG; serine/threonine-protein kinase PknG K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D MSIM_00420 hypothetical protein K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1] D MSIM_30920 hypothetical protein K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1] D MSIM_39120 pknH; serine/threonine-protein kinase PknH K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1] D MSIM_39150 hypothetical protein K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1] D MSIM_43880 hypothetical protein K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1] D MSIM_44740 protein kinase K22893 pknH; serine/threonine kinase PknH [EC:2.7.11.1] D MSIM_11620 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D MSIM_24940 pknA; serine/threonine-protein kinase PknA K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D MSIM_24950 pknB; serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D MSIM_27710 serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D MSIM_00580 hypothetical protein K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D MSIM_04490 hypothetical protein K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D MSIM_07510 pknI; serine/threonine-protein kinase PknI K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D MSIM_10520 hypothetical protein K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D MSIM_46120 pknL; serine/threonine-protein kinase PknL K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D MSIM_49040 pknD; serine/threonine-protein kinase PknD K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D MSIM_53160 pknE; serine/threonine-protein kinase PknE K08884 K08884; serine/threonine protein kinase, bacterial [EC:2.7.11.1] D MSIM_36210 hypothetical protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D MSIM_17640 senX3; sensor-like histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D MSIM_36810 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D MSIM_34930 mprB; signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D MSIM_12910 mtrB; sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D MSIM_23280 two-component sensor histidine kinase K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D MSIM_33110 prrB; sensor-type histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D MSIM_36850 trcS; two-component sensor histidine kinase K07656 trcS; two-component system, OmpR family, sensor histidine kinase TrcS [EC:2.7.13.3] D MSIM_26380 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D MSIM_30140 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D MSIM_48260 diguanylate cyclase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D MSIM_31480 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D MSIM_12330 ATPase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:msim01009] D MSIM_12940 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D MSIM_44240 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D MSIM_24910 pstP; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D MSIM_08850 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:msim01002] D MSIM_01430 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D MSIM_06580 peptidase M52 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D MSIM_14540 guaA; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D MSIM_06700 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase D MSIM_02050 peptidase M23 K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D MSIM_02040 peptidase C40 K21474 ripB; peptidoglycan DL-endopeptidase RipB [EC:3.4.-.-] D MSIM_30870 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D MSIM_25450 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D MSIM_14990 glmS; glutamine--fructose-6-phosphate aminotransferase [isomerizing] K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MSIM_33470 hypothetical protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D MSIM_44110 asnB_1; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D MSIM_45830 asnB_2; putative asparagine synthetase [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D MSIM_27650 peptidase C56 PfpI K05520 yhbO; deglycase [EC:3.5.1.124] D MSIM_41130 hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124] D MSIM_37990 CAAX protease family protein K07052 K07052; CAAX protease family protein D MSIM_51370 abortive infection protein K07052 K07052; CAAX protease family protein D MSIM_41610 pepN; aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2] D MSIM_20870 zmp1; zinc metalloprotease K07386 pepO; putative endopeptidase [EC:3.4.24.-] D MSIM_31300 lpqR; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D MSIM_45710 pepA_2; putative cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D MSIM_38530 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D MSIM_06730 mapB; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D MSIM_15530 mapA; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D MSIM_28580 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MSIM_16830 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D MSIM_51670 blaR; hypothetical protein K02172 blaR1; bla regulator protein blaR1 D MSIM_38710 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D MSIM_34940 serine protease K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D MSIM_13300 putative protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_15140 mycP4; mycosin-4 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_19790 type VII secretion-associated serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_25370 membrane-anchored mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_52070 hypothetical protein K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_17950 peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D MSIM_30490 ptrB; oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D MSIM_07480 dacB2; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MSIM_14110 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MSIM_28370 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D MSIM_41680 clpP1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D MSIM_41690 clpP2; ATP-dependent Clp protease proteolytic subunit 2 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D MSIM_51200 lon; Lon protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D MSIM_11990 signal protein PDZ K07177 K07177; Lon-like protease D MSIM_05180 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D MSIM_07340 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D MSIM_31440 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] D MSIM_28560 ephA; epoxide hydrolase A K27108 ephA_B; epoxide hydrolase A/B [EC:3.3.2.-] D MSIM_21080 monoacylglycerol lipase K01054 MGLL; acylglycerol lipase [EC:3.1.1.23] D MSIM_15700 sppA; signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D MSIM_03670 hypothetical protein K06904 GP4; Escherichia/Staphylococcus phage prohead protease D MSIM_47210 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D MSIM_47200 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D MSIM_30410 ggtA; bifunctional cephalosporin acylase/gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D MSIM_43360 hypothetical protein K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:msim01003] D MSIM_47670 hypothetical protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D MSIM_36120 pmt; putative dolichyl-phosphate-mannose--protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D MSIM_04150 pimA; phosphatidyl-myo-inositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D MSIM_45980 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D MSIM_44630 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol dimannoside mannosyltransferase K14335 pimC; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D MSIM_38170 pimE; polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D MSIM_16900 pimB; GDP-mannose-dependent alpha-mannosyltransferase K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D MSIM_08570 transferase K16150 K16150; glycogen synthase [EC:2.4.1.11] D MSIM_38620 glgA; capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D MSIM_24920 rodA; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_46310 ftsW; cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_39690 wecA; decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D MSIM_46050 hypothetical protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D MSIM_46140 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D MSIM_02220 membrane protein K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D MSIM_00530 mannosyltransferase K14340 K14340; mannosyltransferase [EC:2.4.1.-] D MSIM_19580 mannosyltransferase K14340 K14340; mannosyltransferase [EC:2.4.1.-] D MSIM_26050 embA; putative arabinosyltransferase A K11385 embA; arabinosyltransferase A [EC:2.4.2.-] D MSIM_26040 embB; putative arabinosyltransferase B K11386 embB; arabinosyltransferase B [EC:2.4.2.-] D MSIM_26100 embC; putative arabinosyltransferase C K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D MSIM_26110 aftA; arabinofuranosyltransferase AftA K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D MSIM_25940 membrane protein K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D MSIM_04740 aftC; alpha-(1->3)-arabinofuranosyltransferase K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D MSIM_20330 membrane protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D MSIM_26220 membrane protein K22902 K22902; D-galactosaminyltransferase D MSIM_26190 galactofuranosyl transferase GlfT1 K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D MSIM_25910 glfT2; galactofuranosyl transferase GlfT2 K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D MSIM_13130 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D MSIM_50010 glycosyl transferase family 1 K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393] D MSIM_29830 otsA; trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D MSIM_38580 gpgS; glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:msim01005] D MSIM_06620 gmhA_1; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D MSIM_11500 gmhA_2; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D MSIM_36040 gmhA_3; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D MSIM_36050 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D MSIM_11510 bifunctional protein HldE K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D MSIM_39690 wecA; decaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:msim01011] D MSIM_39810 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D MSIM_17710 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D MSIM_46330 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D MSIM_46300 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D MSIM_46270 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D MSIM_08120 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D MSIM_14900 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D MSIM_40010 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D MSIM_46290 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D MSIM_46320 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D MSIM_46820 uppP; undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D MSIM_25260 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D MSIM_46230 pbpB; penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D MSIM_24930 pbpA; penicillin-binding protein A K05364 pbpA; penicillin-binding protein A D MSIM_07480 dacB2; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MSIM_14110 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D MSIM_28370 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D MSIM_24920 rodA; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_46310 ftsW; cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_31300 lpqR; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D MSIM_02050 peptidase M23 K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D MSIM_02040 peptidase C40 K21474 ripB; peptidoglycan DL-endopeptidase RipB [EC:3.4.-.-] D MSIM_03320 membrane protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D MSIM_25200 cwlM; N-acetylmuramoyl-L-alanine amidase CwlM K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MSIM_27270 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MSIM_44940 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:msim01004] D MSIM_40990 fas; type I polyketide synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D MSIM_16370 fabD2; malonyl CoA-ACP transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MSIM_45180 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D MSIM_13360 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MSIM_15480 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D MSIM_12430 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_20250 fabG4; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_22950 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_31770 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34040 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34210 fabG_3; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_34260 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35190 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35590 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_35600 hypothetical protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_40200 fabG2; putative oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D MSIM_50220 putative 2-nitropropane dioxygenase, NPD K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9] D MSIM_00800 tesB1; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D MSIM_04080 tesB2; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D MSIM_17160 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K11608 mtfabH; mycobacterial beta-ketoacyl-[acyl-carrier protein] synthase III [EC:2.3.1.301] D MSIM_45160 kasA; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K11609 kasA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase I [EC:2.3.1.293] D MSIM_14500 kasB_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K27070 kasB; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase II [EC:2.3.1.294] D MSIM_45150 kasB_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K27070 kasB; meromycolic acid 3-oxoacyl-[acyl-carrier protein] synthase II [EC:2.3.1.294] D MSIM_01970 fabG_1; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K11610 mabA; meromycolic acid 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.-] D MSIM_16550 UPF0336 protein K27071 hadA; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadA [EC:4.2.1.-] D MSIM_16540 hadB; (3R)-hydroxyacyl-ACP dehydratase subunit HadB K27072 hadB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadB [EC:4.2.1.-] D MSIM_23930 (R)-hydratase K27689 hadAB; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadAB [EC:4.2.1.-] D MSIM_16530 UPF0336 protein K27073 hadC; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadC [EC:4.2.1.-] D MSIM_17480 UPF0336 protein K27074 hadD; meromycolic acid (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase HadD [EC:4.2.1.-] D MSIM_01960 inhA; enoyl-[acyl-carrier-protein] reductase [NADH] K11611 inhA; meromycolic acid enoyl-[acyl-carrier protein] reductase [EC:1.3.1.118] D MSIM_31090 desA1_1; acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D MSIM_53420 desA1_2; acyl-ACP desaturase K03921 FAB2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26] D MSIM_37290 desA2; acyl-ACP desaturase K03922 desA2; acyl-[acyl-carrier protein] desaturase [EC:1.14.19.2 1.14.19.-] D MSIM_00460 stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_12710 stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_12720 stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_22010 fatty acid desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_40130 desA3; NADPH-dependent stearoyl-CoA 9-desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D MSIM_07840 mas; multifunctional mycocerosic acid synthase K11628 mas; mycocerosic acid synthase [EC:2.3.1.111] D MSIM_47700 pks12; polyketide synthase K12436 pks12; mycoketide-CoA synthase [EC:2.3.1.295] D MSIM_25990 pks13; polyketide synthase K12437 pks13; polyketide synthase 13 D MSIM_07720 polyketide synthase K12440 ppsA; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase A [EC:2.3.1.292] D MSIM_07730 hypothetical protein K12441 ppsB; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase B [EC:2.3.1.292] D MSIM_07750 ppsC; phthiocerol synthesis polyketide synthase type I PpsC K12442 ppsC; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C [EC:2.3.1.292] D MSIM_07760 ppsD; phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292] D MSIM_07770 ppsE; phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE K12444 ppsE; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase E [EC:2.3.1.292] D MSIM_22780 putative polyketide synthase MbtC K04790 mbtC; mycobactin polyketide synthetase MbtC D MSIM_42580 polyketide synthase K04790 mbtC; mycobactin polyketide synthetase MbtC D MSIM_22790 putative polyketide synthase MbtD K04791 mbtD; mycobactin polyketide synthetase MbtD D MSIM_42590 mbtD; polyketide synthase K04791 mbtD; mycobactin polyketide synthetase MbtD D MSIM_28060 acsA; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D MSIM_52840 entE; 2,3-dihydroxybenzoate-AMP ligase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-] D MSIM_35640 hypothetical protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_43580 AMP-dependent ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_45990 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_54210 acyl-CoA synthetase K03822 K03822; putative long chain acyl-CoA synthase [EC:6.2.1.-] D MSIM_38500 fadD36; acyl-CoA synthetase K12429 fadD36; fatty acid CoA ligase FadD36 D MSIM_03920 fadD9; acyl-CoA synthetase K12421 fadD9; fatty acid CoA ligase FadD9 D MSIM_22240 oxidoreductase K12421 fadD9; fatty acid CoA ligase FadD9 D MSIM_53070 oxidoreductase K12421 fadD9; fatty acid CoA ligase FadD9 D MSIM_42130 putative fatty-acid--CoA ligase FadD K12423 fadD21; fatty acid CoA ligase FadD21 D MSIM_16960 fadD8; acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_21310 fadD5; fatty-acid--CoA ligase FadD5 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_22400 AMP-dependent synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_22960 fadD1; acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_29670 fadD17; long-chain-fatty-acid--CoA ligase FadD17 K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_36450 pks16; putative ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_38560 fadD6; long-chain-acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_50250 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_50350 fadD31; nitrate ABC transporter substrate-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_53450 putative ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D MSIM_07710 fadD26; long-chain-fatty-acid--AMP ligase FadD26 K12426 fadD26; long-chain fatty acid adenylase/transferase FadD26 [EC:6.2.1.59] D MSIM_25980 fadD32; long-chain-fatty-acid--AMP ligase FadD32 K12428 fadD32; fatty acyl-AMP ligase FadD32 [EC:6.2.1.-] D MSIM_01320 plsB1; putative acyltransferase plsB1 K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MSIM_41450 plsB; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D MSIM_10080 hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MSIM_46040 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D MSIM_00190 pks7; polyketide synthase K12434 pks7; polyketide synthase 7 D MSIM_00170 pks8; polyketide synthase K12435 pks8; polyketide synthase 8 D MSIM_00160 hypothetical protein K12439 pks17; polyketide synthase 17 D MSIM_00180 hypothetical protein K12439 pks17; polyketide synthase 17 D MSIM_54350 hypothetical protein K12439 pks17; polyketide synthase 17 D MSIM_07920 trans-acting enoyl reductase K12445 K12445; trans enoyl reductase [EC:1.3.1.-] C 01008 Polyketide biosynthesis proteins [BR:msim01008] D MSIM_07720 polyketide synthase K12440 ppsA; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase A [EC:2.3.1.292] D MSIM_07730 hypothetical protein K12441 ppsB; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase B [EC:2.3.1.292] D MSIM_07750 ppsC; phthiocerol synthesis polyketide synthase type I PpsC K12442 ppsC; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase C [EC:2.3.1.292] D MSIM_07760 ppsD; phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD K12443 ppsD; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D [EC:2.3.1.292] D MSIM_07770 ppsE; phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE K12444 ppsE; phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase E [EC:2.3.1.292] D MSIM_47700 pks12; polyketide synthase K12436 pks12; mycoketide-CoA synthase [EC:2.3.1.295] D MSIM_00200 pks10_1; polyketide synthase-like Pks10 K16167 bpsA; alkylresorcinol/alkylpyrone synthase D MSIM_37970 pks10_2; polyketide synthase-like Pks10 K16167 bpsA; alkylresorcinol/alkylpyrone synthase D MSIM_54310 pks11; alpha-pyrone synthesis polyketide synthase-like Pks11 K16167 bpsA; alkylresorcinol/alkylpyrone synthase D MSIM_42630 mbtH; protein MbtH K05375 mbtH; MbtH protein D MSIM_05990 4'-phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D / holo-[acyl-carrier protein] synthase [EC:6.3.2.14 2.7.8.7] D MSIM_42550 mbtA; 2,3-dihydroxybenzoate-AMP ligase K04787 mbtA; mycobactin salicyl-AMP ligase [EC:6.3.2.-] D MSIM_42560 mbtB; phenyloxazoline synthase MbtB K04788 mbtB; mycobactin phenyloxazoline synthetase D MSIM_22780 putative polyketide synthase MbtC K04790 mbtC; mycobactin polyketide synthetase MbtC D MSIM_42580 polyketide synthase K04790 mbtC; mycobactin polyketide synthetase MbtC D MSIM_22790 putative polyketide synthase MbtD K04791 mbtD; mycobactin polyketide synthetase MbtD D MSIM_42590 mbtD; polyketide synthase K04791 mbtD; mycobactin polyketide synthetase MbtD D MSIM_22760 putative peptide synthetase MbtE K04789 mbtE; mycobactin peptide synthetase MbtE D MSIM_42600 hypothetical protein K04789 mbtE; mycobactin peptide synthetase MbtE D MSIM_22750 putative peptide synthetase MbtF K04792 mbtF; mycobactin peptide synthetase MbtF D MSIM_42610 non-ribosomal peptide synthetase K04792 mbtF; mycobactin peptide synthetase MbtF D MSIM_45310 epoxide hydrolase K21159 sgcF; epoxide hydrolase D MSIM_37960 hypothetical protein K16168 bpsB; methyltransferase D MSIM_42620 mbtG; L-lysine N6-monooxygenase MbtG K04793 mbtG; mycobactin lysine-N-oxygenase D MSIM_05540 glycosyl transferase K16444 gtfB; vancomycin aglycone glucosyltransferase [EC:2.4.1.310] C 01006 Prenyltransferases [BR:msim01006] D MSIM_08600 polyprenyl synthetase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D MSIM_46150 idsA2; geranylgeranyl pyrophosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D MSIM_05620 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D MSIM_37210 short-chain Z-isoprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D MSIM_08620 phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D MSIM_05230 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MSIM_17150 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D MSIM_02290 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D MSIM_25930 decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:msim01007] D MSIM_08220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MSIM_54140 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MSIM_14150 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MSIM_28890 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MSIM_39590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MSIM_36400 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MSIM_01490 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MSIM_41780 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MSIM_24480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MSIM_00380 lysX; lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MSIM_28690 lysS1; lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MSIM_03470 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MSIM_03810 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MSIM_42880 glyQS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MSIM_25730 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MSIM_06380 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MSIM_04190 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MSIM_03340 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MSIM_00300 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MSIM_00290 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MSIM_19330 aspC; putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D MSIM_32630 N-succinyldiaminopimelate aminotransferase DapC K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D MSIM_01000 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_15470 aspartate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_26310 pat; putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_45390 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D MSIM_01170 bioF1; 8-amino-7-oxononanoate synthase 1 K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D MSIM_44450 putative cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D MSIM_43310 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13] D MSIM_00250 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D MSIM_03910 gabT; 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D MSIM_01180 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D MSIM_17250 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D MSIM_45740 ilvE; branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D MSIM_33010 serC; putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 [BR:msim00199] D MSIM_30210 cytochrome P450 K05917 CYP51; sterol 14alpha-demethylase [EC:1.14.14.154 1.14.15.36] D MSIM_44970 cyp124; methyl-branched lipid omega-hydroxylase K20497 CYP124; methyl-branched lipid omega-hydroxylase [EC:1.14.15.14] D MSIM_21650 cytochrome P450 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D MSIM_29340 cytochrome P450 steroid C27-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D MSIM_43540 cytochrome P450 K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D MSIM_50820 linalool 8-monooxygenase K15981 CYP125A; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.29] D MSIM_38990 cyp130; cytochrome P450 130 K21119 CYP130; cytochrome P450 family 130 D MSIM_23640 cyp135A1; putative cytochrome P450 135A1 K24241 CYP135; cytochrome P450 family 135 [EC:1.14.-.-] D MSIM_21890 cyp138; putative cytochrome P450 138 K24192 CYP138; cytochrome P450 family 138 [EC:1.14.-.-] D MSIM_29590 cyp142; putative cytochrome P450 142 K16046 CYP142; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.28] D MSIM_48400 cytochrome P450 K16046 CYP142; cholest-4-en-3-one 26-monooxygenase [EC:1.14.15.28] D MSIM_33880 cyp144_1; cytochrome P450 144 K21200 CYP144; cytochrome P450 family 144 D MSIM_52280 cyp144_2; cytochrome P450 144 K21200 CYP144; cytochrome P450 family 144 D MSIM_31990 cytochrome P450 K23812 CYP150A5; cytochrome P450 family 150 subfamily A5 [EC:1.14.-.-] C 00194 Photosynthesis proteins [BR:msim00194] D MSIM_31380 hypothetical protein K02639 petF; ferredoxin D MSIM_39780 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D MSIM_39770 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D MSIM_39760 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D MSIM_39750 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D MSIM_39740 atpFH; ATP synthase subunit b-delta K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MSIM_39730 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b D MSIM_39720 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c D MSIM_39710 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:msim03000] D MSIM_39830 alkA; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D MSIM_51130 oxyR; putative hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D MSIM_24260 GntR family transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D MSIM_03190 putative GntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MSIM_22370 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MSIM_23780 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D MSIM_22580 putative transcriptional regulator, TetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator D MSIM_02710 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MSIM_10210 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MSIM_16760 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MSIM_43630 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MSIM_46470 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D MSIM_04280 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D MSIM_25520 ethR; HTH-type transcriptional regulator EthR K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D MSIM_41870 TetR family transcriptional regulator K21961 ethR; TetR/AcrR family transcriptional regulator, ethionamide resistance regulator D MSIM_02080 TetR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D MSIM_29030 kstR; HTH-type transcriptional repressor KstR K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MSIM_43560 putative transcriptional regulator, TetR family protein K22107 kstR; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MSIM_29230 TetR family transcriptional regulator K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator D MSIM_16100 mftR; putative mycofactocin biosynthesis transcriptional regulator MftR K24699 mftR; TetR/AcrR family transcriptional regulator, regulator of mycofactocin system D MSIM_23630 HTH-type transcriptional repressor K22295 K22295; TetR/AcrR family transcriptional regulator, repressor for neighboring sulfatase D MSIM_50260 hypothetical protein K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D MSIM_30310 hypothetical protein K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D MSIM_31790 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D MSIM_19150 hspR; MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D MSIM_06480 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D MSIM_07860 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D MSIM_42860 furB; transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D MSIM_49970 furA; transcriptional regulator FurA K22297 furA; Fur family transcriptional regulator, stress-responsive regulator D MSIM_06120 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D MSIM_09030 iclR; IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D MSIM_09040 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D MSIM_12860 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_27970 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_48380 hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MSIM_49350 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D MSIM_51020 arsR; transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D MSIM_04620 cmtR; HTH-type transcriptional regulator CmtR K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor D MSIM_35980 transcriptional regulator K21886 nmtR; ArsR family transcriptional regulator, nickel/cobalt-responsive transcriptional repressor D MSIM_42870 smtB; HTH-type transcriptional repressor SmtB K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D MSIM_37690 DNA-binding protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D MSIM_17860 ramB; HTH-type transcriptional regulator RamB K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D MSIM_05370 clgR; transcriptional regulator ClgR K27043 clgR; XRE family transcriptional regulator, stress-response regulator D MSIM_05080 ideR; iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D MSIM_05940 sirR; transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D MSIM_51660 blaI; transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D MSIM_13570 birA; biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D MSIM_49430 siderophore-interacting protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D MSIM_25590 secretion protein EspR K27097 espR; ESX-1-secreted protein regulator D MSIM_12320 whiB1; transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MSIM_13060 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MSIM_14690 whiB3; transcriptional regulator WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MSIM_27890 whiB4; transcriptional regulator WhiB4 K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MSIM_24690 whiB5; transcriptional regulator WhiB K18956 whiB5; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MSIM_25410 whiB6; transcriptional regulator WhiB K18957 whiB6; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MSIM_12050 whiB7; putative transcriptional regulator WhiB7 K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D MSIM_10330 csoR_1; copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MSIM_21010 hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MSIM_48470 csoR_2; copper-sensing transcriptional repressor CsoR K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D MSIM_39160 embR_1; transcriptional regulatory protein EmbR K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MSIM_43890 embR_2; transcriptional regulatory protein EmbR K22894 embR; SARP family transcriptional regulator, regulator of embCAB operon D MSIM_25180 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MSIM_28850 carD; RNA polymerase-binding transcription factor CarD K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D MSIM_00230 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D MSIM_42690 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D MSIM_16250 hypothetical protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D MSIM_02970 pyrR; bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D MSIM_24520 UPF0301 protein K07735 algH; putative transcriptional regulator D MSIM_05160 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D MSIM_46200 mraZ; transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:msim03021] D MSIM_32790 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D MSIM_15220 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MSIM_16300 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MSIM_16290 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MSIM_02880 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D MSIM_05000 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor D MSIM_05070 sigB; RNA polymerase sigma factor SigB K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D MSIM_12370 sigH_1; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_14070 sigJ; RNA polymerase sigma factor SigJ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_14670 sigD; ECF RNA polymerase sigma factor SigD K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_15410 putative RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_15520 sigL; ECF RNA polymerase sigma factor SigL K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_16480 putative RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_18030 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_21090 sigG; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_22450 rpoE; RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_25240 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_25430 putative alternative RNA polymerase SigI K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_36150 putative sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_38690 sigE; ECF RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_42660 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_47520 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_48080 hypothetical protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_48360 sigH_2; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_49410 sigH_3; ECF RNA polymerase sigma factor SigH K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D MSIM_13660 sigF; RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor D MSIM_52600 alternative sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor D MSIM_06340 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D MSIM_03220 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D MSIM_16510 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D MSIM_27710 serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1] D MSIM_27720 rsbS; RsbT antagonist protein RsbS K17762 rsbS; rsbT antagonist protein RsbS D MSIM_27730 anti-sigma factor antagonist K17763 rsbR; rsbT co-antagonist protein RsbR D MSIM_37150 hypothetical protein K03624 greA; transcription elongation factor GreA D MSIM_39640 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:msim03019] D MSIM_41820 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D MSIM_07670 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D MSIM_05440 rnj; ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D MSIM_41200 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D MSIM_38950 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MSIM_43790 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D MSIM_36760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MSIM_05890 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D MSIM_39640 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D MSIM_19180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MSIM_14830 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_18110 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_49500 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_08150 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D MSIM_12750 ppk2; polyphosphate kinase K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D MSIM_25540 rraA; putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase K02553 rraA; regulator of ribonuclease activity A D MSIM_02490 nucleotide-binding protein K06958 rapZ; RNase adapter protein RapZ D MSIM_47270 helY; putative helicase HelY K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:msim03011] D MSIM_00660 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D MSIM_06960 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D MSIM_15920 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D MSIM_15230 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D MSIM_15750 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D MSIM_24170 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D MSIM_16190 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D MSIM_15780 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D MSIM_15070 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D MSIM_15990 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D MSIM_15240 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D MSIM_16200 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D MSIM_15250 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D MSIM_15790 rpsZ; 30S ribosomal protein S14 type Z K02954 RP-S14; small subunit ribosomal protein S14 D MSIM_22520 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D MSIM_05900 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D MSIM_07400 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D MSIM_15890 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D MSIM_22530 rpsR2; 30S ribosomal protein S18 2 K02963 RP-S18; small subunit ribosomal protein S18 D MSIM_24150 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D MSIM_15940 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D MSIM_42230 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D MSIM_16490 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D MSIM_15950 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D MSIM_15980 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D MSIM_15970 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D MSIM_15800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D MSIM_15770 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D MSIM_24140 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D MSIM_16350 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D MSIM_16500 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D MSIM_16340 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D MSIM_15080 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D MSIM_15820 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D MSIM_15730 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D MSIM_15910 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D MSIM_15210 hypothetical protein K02879 RP-L17; large subunit ribosomal protein L17 D MSIM_15760 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D MSIM_07350 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D MSIM_00350 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D MSIM_41830 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D MSIM_15930 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D MSIM_15960 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D MSIM_15810 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D MSIM_41840 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D MSIM_08050 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D MSIM_22500 rpmB2; 50S ribosomal protein L28-2 K02902 RP-L28; large subunit ribosomal protein L28 D MSIM_15900 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D MSIM_15740 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D MSIM_39650 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D MSIM_34910 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D MSIM_16560 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33 D MSIM_22510 rpmG1; 50S ribosomal protein L33 1 K02913 RP-L33; large subunit ribosomal protein L33 D MSIM_25110 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D MSIM_00360 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D MSIM_36470 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D MSIM_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D MSIM_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:msim03009] D MSIM_07670 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D MSIM_41200 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D MSIM_42770 era; GTPase Era K03595 era; GTPase D MSIM_41850 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-] D MSIM_06340 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D MSIM_03220 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D MSIM_16510 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D MSIM_36430 ksgA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D MSIM_02630 putative methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D MSIM_07940 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D MSIM_42710 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D MSIM_25160 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D MSIM_46210 rsmH; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D MSIM_36130 rsmI; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D MSIM_54080 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D MSIM_28900 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D MSIM_06830 rlmN; putative dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D MSIM_13770 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D MSIM_53960 putative RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D MSIM_01420 putative RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D MSIM_14860 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D MSIM_35020 rimJ; N-acetyltransferase GCN5 K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D MSIM_07380 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D MSIM_41820 ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D MSIM_03330 putative pre-16S rRNA nuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D MSIM_38950 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D MSIM_12500 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D MSIM_53940 der; GTPase Der K03977 engA; GTPase D MSIM_05210 hflX; GTPase HflX K03665 hflX; GTPase D MSIM_39680 putative threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MSIM_03850 relA; putative GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D MSIM_06310 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D MSIM_06350 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D MSIM_42060 rsfS; ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein D MSIM_42730 ybeY; endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor D MSIM_37450 ychF; ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase D MSIM_07680 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:msim03016] D MSIM_42270 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D MSIM_25300 pcnA; CCA tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D MSIM_08220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MSIM_06380 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D MSIM_01490 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D MSIM_24480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MSIM_36400 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D MSIM_39590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MSIM_00380 lysX; lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MSIM_28690 lysS1; lysine--tRNA ligase 1 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D MSIM_03470 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MSIM_03340 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D MSIM_42880 glyQS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MSIM_04190 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D MSIM_25730 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D MSIM_28890 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D MSIM_41780 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D MSIM_03810 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D MSIM_00300 pheS; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D MSIM_00290 pheT; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D MSIM_54140 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MSIM_14150 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D MSIM_50710 dtd; D-aminoacyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D MSIM_39070 hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MSIM_47110 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D MSIM_20770 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D MSIM_15200 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D MSIM_05980 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D MSIM_08500 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MSIM_39680 putative threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D MSIM_05230 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D MSIM_23320 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D MSIM_44420 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D MSIM_46860 cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D MSIM_25120 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D MSIM_40030 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D MSIM_04830 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D MSIM_41510 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D MSIM_12390 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D MSIM_26570 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D MSIM_05280 miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D MSIM_07370 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D MSIM_14390 spoU; putative tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D MSIM_00340 tsnR; RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D MSIM_13770 hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D MSIM_08490 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D MSIM_30900 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D MSIM_28390 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D MSIM_14870 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D MSIM_14850 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D MSIM_14880 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D MSIM_05890 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:msim03012] D MSIM_06320 hypothetical protein K02519 infB; translation initiation factor IF-2 D MSIM_00370 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MSIM_06950 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D MSIM_16170 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MSIM_16180 fusA; elongation factor G K02355 fusA; elongation factor G D MSIM_22180 elongation factor G-like protein K02355 fusA; elongation factor G D MSIM_23300 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor D MSIM_39660 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D MSIM_06850 frr; ribosome-recycling factor K02838 frr; ribosome recycling factor D MSIM_27660 methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D MSIM_39670 prmC; release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D MSIM_36460 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D MSIM_15260 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D MSIM_03230 efp; elongation factor P K02356 efp; elongation factor P D MSIM_10750 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:msim03110] D MSIM_19110 clpB; chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D MSIM_28710 clpC1; ATP-dependent Clp protease ATP-binding subunit ClpC1 K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D MSIM_41710 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D MSIM_44240 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D MSIM_19180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MSIM_14830 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_18110 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_49500 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_19160 dnaJ1; chaperone protein DnaJ 1 K03686 dnaJ; molecular chaperone DnaJ D MSIM_42700 dnaJ2; chaperone protein DnaJ 2 K03686 dnaJ; molecular chaperone DnaJ D MSIM_19170 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D MSIM_11740 hsp18; 18 kDa antigen K13993 HSP20; HSP20 family protein D MSIM_20130 hsp; heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein D MSIM_23940 18 kDa antigen (HSP 16.7) K13993 HSP20; HSP20 family protein D MSIM_14840 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D MSIM_38710 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107] D MSIM_28580 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D MSIM_39710 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a D MSIM_20730 hypothetical protein K19777 hdeA; acid stress chaperone HdeA D MSIM_06500 hypA; hydrogenase expression protein HupH K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D MSIM_53410 hypB; hydrogenase nickel incorporation protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D MSIM_13300 putative protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_15140 mycP4; mycosin-4 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_19790 type VII secretion-associated serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_25370 membrane-anchored mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_52070 hypothetical protein K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_25000 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D MSIM_03830 ppiB; putative peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D MSIM_25210 trxA; thioredoxin K03671 TXN; thioredoxin D MSIM_39900 hypothetical protein K05838 ybbN; putative thioredoxin C 04131 Membrane trafficking [BR:msim04131] D MSIM_41810 ndkA; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D MSIM_26160 flotillin family protein K07192 FLOT; flotillin D MSIM_25600 UPF0016 family membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D MSIM_46020 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D MSIM_23370 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D MSIM_02410 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MSIM_17650 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D MSIM_00810 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D MSIM_06140 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D MSIM_44240 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D MSIM_41230 MFS transporter K06902 UMF1; MFS transporter, UMF1 family C 04121 Ubiquitin system [BR:msim04121] D MSIM_47190 pup; prokaryotic ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:msim03051] D MSIM_44240 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D MSIM_47210 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D MSIM_47200 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D MSIM_47150 mpa; proteasome-associated ATPase K13527 mpa; proteasome-associated ATPase D MSIM_47220 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D MSIM_47230 pafB; protein PafB K13572 pafB; proteasome accessory factor B D MSIM_47240 protein pafC K13573 pafC; proteasome accessory factor C D MSIM_47180 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:msim03032] D MSIM_08170 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D MSIM_25100 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MSIM_24130 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D MSIM_42960 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D MSIM_24160 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_41500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_01360 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MSIM_25090 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MSIM_42220 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MSIM_28280 DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MSIM_27330 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_45940 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_27190 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MSIM_45420 hypothetical protein K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D MSIM_07330 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D MSIM_00680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D MSIM_08450 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MSIM_25050 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MSIM_23760 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MSIM_25060 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MSIM_11260 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D MSIM_28260 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:msim03036] D MSIM_07670 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D MSIM_23370 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D MSIM_26160 flotillin family protein K07192 FLOT; flotillin D MSIM_28700 lsr2; nucleoid-associated protein Lsr2 K26249 lsr2; nucleoid-associated protein Lsr2 D MSIM_08170 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D MSIM_25100 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D MSIM_21810 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein D MSIM_07600 smc; chromosome partition protein Smc K03529 smc; chromosome segregation protein D MSIM_53980 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D MSIM_53970 hypothetical protein K06024 scpB; segregation and condensation protein B D MSIM_10720 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D MSIM_46230 pbpB; penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D MSIM_05400 ftsK; DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D MSIM_46340 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D MSIM_24920 rodA; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_46310 ftsW; cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_10710 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D MSIM_46350 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MSIM_04700 cell division protein ZapE K06916 zapE; cell division protein ZapE D MSIM_25200 cwlM; N-acetylmuramoyl-L-alanine amidase CwlM K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MSIM_27270 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MSIM_44940 hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D MSIM_46380 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF D MSIM_12260 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D MSIM_25170 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D MSIM_53990 hypothetical protein K03496 parA; chromosome partitioning protein D MSIM_25180 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MSIM_25160 rsmG; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D MSIM_06980 xerC_1; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D MSIM_07090 xerC_2; tyrosine recombinase XerC K04763 xerD; integrase/recombinase XerD D MSIM_54010 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D MSIM_38730 mrp; iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D MSIM_02470 whiA; putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:msim03400] D MSIM_39820 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D MSIM_08720 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D MSIM_08090 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D MSIM_54150 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] D MSIM_28790 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D MSIM_27990 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D MSIM_32790 helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D MSIM_18560 mutT3; putative 8-oxo-dGTP diphosphatase 3 K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D MSIM_38210 mutT2; 8-oxo-dGTP diphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D MSIM_04940 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D MSIM_33180 mug; G/U mismatch-specific DNA glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D MSIM_11580 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D MSIM_39020 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D MSIM_39830 alkA; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D MSIM_38600 tagA; DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D MSIM_00640 mutM_1; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MSIM_07660 mutM_2; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MSIM_34640 putative formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D MSIM_13720 nei2; endonuclease 8 2 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D MSIM_41640 nei1; endonuclease 8 1 K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D MSIM_18340 xthA; exodeoxyribonuclease III K01142 xthA; exodeoxyribonuclease III [EC:3.1.11.2] D MSIM_16280 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D MSIM_08450 ligA; DNA ligase A K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D MSIM_00680 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D MSIM_00490 uvrA; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A D MSIM_00560 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B D MSIM_02500 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C D MSIM_12070 uvrD2; ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_12110 ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_34690 uvrD1; ATP-dependent DNA helicase UvrD1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D MSIM_16300 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D MSIM_16290 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D MSIM_15220 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D MSIM_02880 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D MSIM_36720 mfd; transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D MSIM_37410 xseA; exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D MSIM_37400 xseB; exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D MSIM_01360 dnaE1; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D MSIM_25090 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D MSIM_42220 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D MSIM_28280 DNA polymerase K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D MSIM_27330 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_45940 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D MSIM_27190 DNA polymerase III, subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D MSIM_24160 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_41500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_05300 recA; protein RecA K03553 recA; recombination protein RecA D MSIM_03960 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D MSIM_03950 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D MSIM_03970 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D MSIM_02780 priA_2; putative primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D MSIM_28830 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D MSIM_25080 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D MSIM_08030 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D MSIM_42830 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D MSIM_27290 recR; recombination protein RecR K06187 recR; recombination protein RecR D MSIM_54060 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D MSIM_41210 hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D MSIM_34490 mku; non-homologous end joining protein Ku K10979 ku; DNA end-binding protein Ku D MSIM_00630 ATP-dependent DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D MSIM_34550 ligD; multifunctional non-homologous end joining protein LigD K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] D MSIM_25050 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D MSIM_23760 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MSIM_25060 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D MSIM_11260 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D MSIM_28260 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D MSIM_08170 hypothetical protein K03530 hupB; DNA-binding protein HU-beta D MSIM_43790 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D MSIM_01450 dinB1; DNA polymerase IV 1 K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D MSIM_09330 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D MSIM_25510 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D MSIM_05180 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D MSIM_14510 hypothetical protein K14161 imuB; protein ImuB D MSIM_14430 dnaE2; error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D MSIM_05290 recX; regulatory protein RecX K03565 recX; regulatory protein D MSIM_39940 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D MSIM_13710 lhr; ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D MSIM_08160 mutT1; putative 8-oxo-dGTP diphosphatase 1 K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D MSIM_54020 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D MSIM_09280 nrdE; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D MSIM_08910 nrdF; ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MSIM_20410 nrdB; R2-like ligand binding oxidase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D MSIM_06300 phosphoesterase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:msim03029] D MSIM_06320 hypothetical protein K02519 infB; translation initiation factor IF-2 D MSIM_00370 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D MSIM_06950 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D MSIM_16170 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MSIM_16180 fusA; elongation factor G K02355 fusA; elongation factor G D MSIM_22180 elongation factor G-like protein K02355 fusA; elongation factor G D MSIM_42770 era; GTPase Era K03595 era; GTPase D MSIM_54140 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D MSIM_24480 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D MSIM_03470 aspS; aspartate--tRNA(Asp/Asn) ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D MSIM_42880 glyQS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D MSIM_39590 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D MSIM_03070 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D MSIM_08390 gatA_1; glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D MSIM_08360 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D MSIM_08400 gatC; glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D MSIM_24160 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_41500 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D MSIM_19180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MSIM_19170 grpE; protein GrpE K03687 GRPE; molecular chaperone GrpE D MSIM_14830 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_18110 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_49500 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_14840 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES D MSIM_19160 dnaJ1; chaperone protein DnaJ 1 K03686 dnaJ; molecular chaperone DnaJ D MSIM_42700 dnaJ2; chaperone protein DnaJ 2 K03686 dnaJ; molecular chaperone DnaJ D MSIM_08500 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D MSIM_38730 mrp; iron-sulfur cluster carrier protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D MSIM_02290 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D MSIM_02250 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D MSIM_25140 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MSIM_44240 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:msim02000] D MSIM_40140 irtA; iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-] D MSIM_40150 irtB; iron import ATP-binding/permease protein IrtB K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-] D MSIM_39220 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump D MSIM_39210 putative ABC transporter ATP-binding protein K24820 K24820; ATP-binding cassette, subfamily B, fatty acid transporter D MSIM_00780 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D MSIM_00770 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D MSIM_51880 bacA; vitamin B12 transport ATP-binding protein BacA K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D MSIM_00100 hypothetical protein K15738 uup; ABC transport system ATP-binding/permease protein D MSIM_54280 hypothetical protein K15738 uup; ABC transport system ATP-binding/permease protein D MSIM_00590 ABC transporter ATP-binding/permease protein K21397 K21397; ABC transport system ATP-binding/permease protein D MSIM_10100 hypothetical protein K21397 K21397; ABC transport system ATP-binding/permease protein D MSIM_14300 ABC transporter ATP-binding/permease Rv1747 K21397 K21397; ABC transport system ATP-binding/permease protein D MSIM_14310 ABC transporter ATP-binding/permease protein K21397 K21397; ABC transport system ATP-binding/permease protein D MSIM_39140 ABC transporter ATP-binding protein K21397 K21397; ABC transport system ATP-binding/permease protein D MSIM_52930 ABC transporter ATP-binding/permease protein K21397 K21397; ABC transport system ATP-binding/permease protein D MSIM_42370 subI; sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D MSIM_42380 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D MSIM_42390 cysW; sulfate ABC transporter permease CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D MSIM_42400 cysA; sulfate/thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D MSIM_51430 modA; molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein D MSIM_51420 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein D MSIM_51410 modC; molybdenum import ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D MSIM_03170 putative nitrate ABC transporter, periplasmic protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_23240 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_23730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_32730 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D MSIM_03160 putative nitrate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D MSIM_23220 sulfate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D MSIM_23720 putative nitrate ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein D MSIM_32750 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein D MSIM_03150 putative nitrate ABC transporter, ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_23230 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_23710 ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_32740 ssuB; aliphatic sulfonates import ATP-binding protein SsuB K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D MSIM_26500 proX; glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D MSIM_26520 proW; ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D MSIM_26530 proZ; ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D MSIM_26510 proV; proline/glycine betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D MSIM_41060 putative sulfonate ABC transporter, periplasmic protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D MSIM_41070 putative sulfonate ABC transporter, permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D MSIM_38820 sugC; trehalose import ATP-binding protein SugC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D MSIM_47980 sugar ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D MSIM_38790 lpqY; hypothetical protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D MSIM_38800 sugA; trehalose transport system permease protein SugA K10237 thuF; trehalose/maltose transport system permease protein D MSIM_38810 sugB; trehalose transport system permease protein SugB K10238 thuG; trehalose/maltose transport system permease protein D MSIM_21230 mce1F; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21240 lprK; lipoprotein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21250 mce1D; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21260 mce1C; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21270 mce1B; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21280 mce1A; cell invasion protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29740 mce4A; Mce family protein Mce4A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29750 mce4B; Mce family protein Mce4B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29760 mce4C; Mce family protein Mce4C K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29770 mce4D; mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29780 lprN; hypothetical protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_29790 mce4F; Mce family protein Mce4 K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_30850 mce2A; Mce family protein Mce2A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32330 virulence factor K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32340 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32350 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32360 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32370 virulence factor Mce K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_32380 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43050 mce3A; MCE-family protein MCE3A K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43060 mce3B; Mce family protein Mce3B K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43070 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43080 mce3D; Mce family protein Mce3D K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43090 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_43100 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_46970 putative Mce family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_46980 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_46990 putative MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_47000 putative MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_47010 putative MCE family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_47020 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D MSIM_21290 yrbE1B; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_21300 yrbE1A; membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_29720 yrbE4A; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_29730 yrbE4B; ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_32310 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_32320 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_43030 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_43040 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_47030 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_47040 ABC transporter K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D MSIM_16310 mkl; putative ribonucleotide transport ATP-binding protein mkl K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D MSIM_21190 Mce associated membrane protein K18481 mas; Mce-associated membrane protein D MSIM_21200 hypothetical protein K18481 mas; Mce-associated membrane protein D MSIM_21210 membrane protein K18481 mas; Mce-associated membrane protein D MSIM_21220 hypothetical protein K18481 mas; Mce-associated membrane protein D MSIM_29800 mammalian cell entry protein K18481 mas; Mce-associated membrane protein D MSIM_29810 Mce associated protein K18481 mas; Mce-associated membrane protein D MSIM_32230 hypothetical protein K18481 mas; Mce-associated membrane protein D MSIM_32240 hypothetical protein K18481 mas; Mce-associated membrane protein D MSIM_32400 hypothetical protein K18481 mas; Mce-associated membrane protein D MSIM_32410 hypothetical protein K18481 mas; Mce-associated membrane protein D MSIM_43110 hypothetical protein K18481 mas; Mce-associated membrane protein D MSIM_43120 outer membrane protein K18481 mas; Mce-associated membrane protein D MSIM_46960 hypothetical protein K18481 mas; Mce-associated membrane protein D MSIM_43330 uspC; sugar ABC transporter substrate-binding lipoprotein UspC K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D MSIM_47950 sugar ABC transporter substrate-binding lipoprotein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D MSIM_43350 uspA; sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D MSIM_47960 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D MSIM_43340 uspB; sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D MSIM_47970 ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D MSIM_15850 pstS3_1; phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D MSIM_31020 phoS3; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D MSIM_34460 pstS3_2; phosphate-binding protein PstS 3 K02040 pstS; phosphate transport system substrate-binding protein D MSIM_49030 pstS2; phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D MSIM_31030 pstC; phosphate transport system permease protein K02037 pstC; phosphate transport system permease protein D MSIM_34470 pstC2; phosphate transport system permease protein PstC 2 K02037 pstC; phosphate transport system permease protein D MSIM_31040 pstA; phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein D MSIM_34480 pstA1; phosphate transport system permease protein PstA 1 K02038 pstA; phosphate transport system permease protein D MSIM_31050 pstB; phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D MSIM_24290 phnD; phosphate-import protein PhnD K02044 phnD; phosphonate transport system substrate-binding protein D MSIM_24270 phnE; phosphate-import permease protein PhnE K02042 phnE; phosphonate transport system permease protein D MSIM_24280 phnC; phosphate-import ATP-binding protein PhnC K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D MSIM_37880 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D MSIM_18580 glnH; ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D MSIM_24440 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D MSIM_24450 ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D MSIM_28090 dppA; peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D MSIM_28100 dppB; peptide ABC transporter K15581 oppB; oligopeptide transport system permease protein D MSIM_28110 dppC; peptide ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D MSIM_28120 dppD; peptide ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D MSIM_39300 hypothetical protein K13889 gsiB; glutathione transport system substrate-binding protein D MSIM_39330 peptide ABC transporter permease K13890 gsiC; glutathione transport system permease protein D MSIM_39320 putative peptide transport permease protein K13891 gsiD; glutathione transport system permease protein D MSIM_39310 putative ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D MSIM_03870 putative lipoprotein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D MSIM_08870 fecB; FeIII-dicitrate-binding periplasmic lipoprotein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D MSIM_20020 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D MSIM_08840 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D MSIM_43260 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D MSIM_43250 putative ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D MSIM_48730 hypothetical protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D MSIM_07900 ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D MSIM_29010 ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D MSIM_07870 ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D MSIM_07880 ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D MSIM_28990 helicase K02075 ABC.ZM.P; zinc/manganese transport system permease protein D MSIM_07890 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D MSIM_29000 ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D MSIM_26180 sugar ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D MSIM_26200 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D MSIM_38650 ABC transporter permease K25149 narB; polyether ionophore transport system permease protein D MSIM_38660 tetronasin ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein D MSIM_10710 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein D MSIM_10720 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D MSIM_01610 drrB_1; doxorubicin resistance ABC transporter permease protein DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein D MSIM_01620 drrC; putative doxorubicin resistance ABC transporter permease protein DrrC K01992 ABC-2.P; ABC-2 type transport system permease protein D MSIM_02240 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D MSIM_07790 drrB_2; doxorubicin resistance ABC transporter permease DrrB K01992 ABC-2.P; ABC-2 type transport system permease protein D MSIM_07800 peptide ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D MSIM_22110 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D MSIM_54180 transport permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D MSIM_01600 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D MSIM_02230 spermidine/putrescine ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D MSIM_07780 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D MSIM_22100 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D MSIM_54170 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D MSIM_52550 permease K02004 ABC.CD.P; putative ABC transport system permease protein D MSIM_52540 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D MSIM_02180 sufC; ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D MSIM_24510 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D MSIM_45130 proP; proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D MSIM_48390 oxalate/formate MFS antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D MSIM_50680 nanT; MFS transporter K08178 JEN; MFS transporter, SHS family, lactate transporter D MSIM_10280 MFS transporter K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter D MSIM_23140 hypothetical protein K08176 PHO84; MFS transporter, PHS family, inorganic phosphate transporter D MSIM_20060 narK3_1; MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D MSIM_20070 narK3_2; MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D MSIM_20940 narK3_3; MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D MSIM_30520 emrB_2; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D MSIM_30530 emrB_3; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D MSIM_02600 putative triacylglyceride transporter K27247 K27247; MFS transporter, DHA2 family, triacylglyceride efflux pump D MSIM_39850 putative transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D MSIM_41230 MFS transporter K06902 UMF1; MFS transporter, UMF1 family D MSIM_07050 ydjE; MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D MSIM_12100 NAD-binding protein of Kef-type K+ transporter K10716 kch; voltage-gated potassium channel D MSIM_07460 amt_1; ammonium transporter K03320 amt; ammonium transporter, Amt family D MSIM_07580 amt_2; putative ammonia channel K03320 amt; ammonium transporter, Amt family D MSIM_54160 ammonium transporter K03320 amt; ammonium transporter, Amt family D MSIM_02010 UPF0353 protein K07114 yfbK; Ca-activated chloride channel homolog D MSIM_13900 UPF0353 protein K07114 yfbK; Ca-activated chloride channel homolog D MSIM_13910 UPF0353 protein K07114 yfbK; Ca-activated chloride channel homolog D MSIM_34960 mscL; large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D MSIM_10740 hypothetical protein K22044 ybiO; moderate conductance mechanosensitive channel D MSIM_38840 corA; magnesium transport protein CorA K03284 corA; magnesium transporter D MSIM_09920 crcB1; putative fluoride ion transporter CrcB 1 K06199 crcB; fluoride exporter D MSIM_09930 crcB2; putative fluoride ion transporter CrcB 2 K06199 crcB; fluoride exporter D MSIM_30680 DUF1211 domain-containing membrane protein K24915 TMEM175; TMEM175 potassium channel family protein D MSIM_42750 UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D MSIM_51700 UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D MSIM_51710 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D MSIM_17270 gabP; gaba permease gabP (4-amino butyrate transport carrier) K11735 gabP; GABA permease D MSIM_50130 cycA; amino acid transporter K11737 cycA; D-serine/D-alanine/glycine transporter D MSIM_46890 ansP1; L-asparagine permease 1 K11738 ansP; L-asparagine permease D MSIM_51500 amino acid permease K28029 UGA4; amino acid or GABA permease D MSIM_18850 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D MSIM_20790 mmpL3; putative trehalose monomycolate exporter MmpL3 K20470 mmpL3; trehalose monomycolate/heme transporter D MSIM_20830 mmpL11; putative transport protein MmpL11 K20466 mmpL11; heme transporter D MSIM_09640 mmr; multidrug resistance protein Mmr K03297 emrE; small multidrug resistance pump D MSIM_00670 membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D MSIM_18650 UPF0060 membrane protein K09771 TC.SMR3; small multidrug resistance family-3 protein D MSIM_49830 L-lactate permease K03303 lutP; lactate permease D MSIM_00930 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter D MSIM_22730 sodium/calcium exchanger family protein K07301 yrbG; cation:H+ antiporter D MSIM_20960 cation acetate symporter K14393 actP; cation/acetate symporter D MSIM_44670 putative Na(+)/H(+) exchanger K24163 nhaK; monovalent cation/hydrogen antiporter D MSIM_04850 cvrA; sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter D MSIM_33300 putative Na(+)/H(+) antiporter K11105 cvrA; potassium/hydrogen antiporter D MSIM_20910 hypothetical protein K26731 CHX; K+:H+ antiporter D MSIM_04880 ceoB; potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D MSIM_04890 ceoC; potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D MSIM_33290 putative potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D MSIM_36580 allantoin permease K23467 tgnP; trigonelline permease D MSIM_03610 hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease D MSIM_20270 chloride channel protein K03281 clcA; chloride channel protein, CIC family D MSIM_21800 hypothetical protein K03281 clcA; chloride channel protein, CIC family D MSIM_31240 chrA; chromate resistance transporter K07240 chrA; chromate transporter D MSIM_06490 nicT; nickel/cobalt efflux system K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D MSIM_23690 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D MSIM_34430 hypothetical protein K03322 mntH; manganese transport protein D MSIM_46020 hypothetical protein K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D MSIM_28940 arsB2; arsenic transport integral membrane protein ArsB K03893 arsB; arsenical pump membrane protein D MSIM_49370 putative arsenic-transport integral membrane protein ArsC K03325 ACR3; arsenite transporter D MSIM_25260 mviN; putative peptidoglycan biosynthesis protein MviN K03980 murJ; putative peptidoglycan lipid II flippase D MSIM_20800 AI-2E family transporter K20469 K20469; putative heme transporter D MSIM_43210 membrane protein K22736 VIT; vacuolar iron transporter family protein D MSIM_24920 rodA; putative FtsW-like protein K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_46310 ftsW; cell division protein FtsW K03588 ftsW; peptidoglycan glycosyltransferase [EC:2.4.99.28] D MSIM_25600 UPF0016 family membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D MSIM_48020 hypothetical protein K07243 FTR; high-affinity iron transporter D MSIM_48040 lipoprotein K07224 efeO; iron uptake system component EfeO D MSIM_48050 hypothetical protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D MSIM_09450 carbon starvation protein A K06200 cstA; carbon starvation protein D MSIM_46680 malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D MSIM_46700 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit D MSIM_17220 ccdA; cytochrome C biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D MSIM_36210 hypothetical protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3] D MSIM_13170 hypothetical protein K27044 pacL1; chaperone-like protein D MSIM_20810 hypothetical protein K20468 K20468; putative heme transporter D MSIM_07650 hypothetical protein K04758 feoA; ferrous iron transport protein A D MSIM_07640 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D MSIM_08710 tryptophan-rich sensory protein K05770 TSPO; translocator protein D MSIM_00540 putative magnesium transport MgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D MSIM_51960 mgtC; methyltransferase K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D MSIM_09120 hypothetical protein K00389 yidH; inner membrane protein YidH D MSIM_23740 hypothetical protein K00389 yidH; inner membrane protein YidH D MSIM_25560 copper resistance protein C K07156 copC; copper resistance protein C C 02044 Secretion system [BR:msim02044] D MSIM_28160 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D MSIM_28170 hypothetical protein K12510 tadB; tight adherence protein B D MSIM_28180 hypothetical protein K12511 tadC; tight adherence protein C D MSIM_46390 hypothetical protein K02221 yggT; YggT family protein D MSIM_42200 membrane protein K02237 comEA; competence protein ComEA D MSIM_42210 hypothetical protein K02238 comEC; competence protein ComEC D MSIM_13220 hypothetical protein K27084 eccA; ESX secretion system protein EccA D MSIM_19880 type VII secretion AAA-ATPase EccA K27084 eccA; ESX secretion system protein EccA D MSIM_25390 eccA2; ESX-2 secretion system protein EccA2 K27084 eccA; ESX secretion system protein EccA D MSIM_52050 eccA5; ESX-5 secretion system protein EccA5 K27084 eccA; ESX secretion system protein EccA D MSIM_13260 hypothetical protein K27085 eccB; ESX secretion system ATPase EccB D MSIM_15150 eccB4; ESX-4 secretion system ATPase EccB4 K27085 eccB; ESX secretion system ATPase EccB D MSIM_19870 ESX-3 secretion system protein eccB3 K27085 eccB; ESX secretion system ATPase EccB D MSIM_24580 eccB2; ESX-2 secretion system ATPase EccB2 K27085 eccB; ESX secretion system ATPase EccB D MSIM_52210 eccB5; ESX-5 secretion system ATPase EccB5 K27085 eccB; ESX secretion system ATPase EccB D MSIM_13280 putative FtsK/SpoIIIE family protein K27086 eccC; ESX secretion system protein EccC D MSIM_15120 eccC4; ESX-4 secretion system protein EccC4 K27086 eccC; ESX secretion system protein EccC D MSIM_19860 type VII secretion protein EccC K27086 eccC; ESX secretion system protein EccC D MSIM_52200 eccC5; ESX-5 secretion system protein EccC5 K27086 eccC; ESX secretion system protein EccC D MSIM_13270 hypothetical protein K27087 eccD; ESX secretion system protein EccD D MSIM_13290 hypothetical protein K27087 eccD; ESX secretion system protein EccD D MSIM_15130 eccD4; ESX-4 secretion system protein eccD4 K27087 eccD; ESX secretion system protein EccD D MSIM_19800 eccD3; ESX-3 secretion system protein EccD3 K27087 eccD; ESX secretion system protein EccD D MSIM_25360 eccD2; ESX-2 secretion system protein eccD2 K27087 eccD; ESX secretion system protein EccD D MSIM_52080 eccD5; ESX-5 secretion system protein EccD5 K27087 eccD; ESX secretion system protein EccD D MSIM_13250 hypothetical protein K27088 eccE; ESX secretion system protein EccE D MSIM_19780 type VII secretion protein EccE K27088 eccE; ESX secretion system protein EccE D MSIM_25380 eccE2; ESX-2 secretion system protein EccE2 K27088 eccE; ESX secretion system protein EccE D MSIM_52060 type VII secretion protein EccE K27088 eccE; ESX secretion system protein EccE D MSIM_13300 putative protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_15140 mycP4; mycosin-4 K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_19790 type VII secretion-associated serine protease K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_25370 membrane-anchored mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_52070 hypothetical protein K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D MSIM_13410 hypothetical protein K27091 espG; ESX secretion-associated protein EspG D MSIM_19810 espG3; ESX-3 secretion-associated protein EspG3 K27091 espG; ESX secretion-associated protein EspG D MSIM_25340 espG2; ESX-2 secretion-associated protein EspG2 K27091 espG; ESX secretion-associated protein EspG D MSIM_52090 espG5; ESX-5 secretion-associated protein EspG5 K27091 espG; ESX secretion-associated protein EspG D MSIM_15090 esxT; ESAT-6-like protein EsxT K14956 esx; ESAT-6 family protein D MSIM_15100 esxU; ESAT-6-like protein EsxU K14956 esx; ESAT-6 family protein D MSIM_17430 esxF; ESAT-6-like protein EsxF K14956 esx; ESAT-6 family protein D MSIM_17440 esxE; secretion protein K14956 esx; ESAT-6 family protein D MSIM_19820 esxH; ESAT-6-like protein EsxH K14956 esx; ESAT-6 family protein D MSIM_19830 esxG; type VII secretion system protein EsxS K14956 esx; ESAT-6 family protein D MSIM_25320 hypothetical protein K14956 esx; ESAT-6 family protein D MSIM_25330 hypothetical protein K14956 esx; ESAT-6 family protein D MSIM_36870 esxN_1; ESAT-6-like protein EsxN K14956 esx; ESAT-6 family protein D MSIM_36880 esxP_1; ESAT-6-like protein EsxP K14956 esx; ESAT-6 family protein D MSIM_49620 esxN_2; ESAT-6-like protein EsxN K14956 esx; ESAT-6 family protein D MSIM_52100 esxN_3; ESAT-6-like protein EsxN K14956 esx; ESAT-6 family protein D MSIM_52110 esxP_2; ESAT-6-like protein EsxP K14956 esx; ESAT-6 family protein D MSIM_12820 secA1; protein translocase subunit SecA 1 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MSIM_51860 secA2; protein translocase subunit SecA 2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D MSIM_03890 hypothetical protein K03072 secD; preprotein translocase subunit SecD D MSIM_16520 secE; protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D MSIM_03880 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D MSIM_02380 secG; putative protein-export membrane protein SecG K03075 secG; preprotein translocase subunit SecG D MSIM_15550 secY; protein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D MSIM_07530 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D MSIM_07590 ftsY; signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor D MSIM_03900 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D MSIM_25140 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D MSIM_47250 tatA; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D MSIM_38720 tatB; sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB D MSIM_47260 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:msim02042] D MSIM_42750 UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D MSIM_51700 UPF0053 protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D MSIM_51710 membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D MSIM_32180 UPF0073 membrane protein K11068 hlyIII; hemolysin III D MSIM_37200 UPF0073 membrane protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:msim02022] D MSIM_17640 senX3; sensor-like histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D MSIM_17630 regX3; sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3 D MSIM_36810 kdpD; sensor protein KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D MSIM_36800 kdpE; DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D MSIM_34930 mprB; signal transduction histidine-protein kinase/phosphatase MprB K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D MSIM_34920 mprA; response regulator MprA K07669 mprA; two-component system, OmpR family, response regulator MprA D MSIM_12910 mtrB; sensor histidine kinase MtrB K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D MSIM_12920 mtrA; DNA-binding response regulator MtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA D MSIM_23280 two-component sensor histidine kinase K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D MSIM_33110 prrB; sensor-type histidine kinase PrrB K07655 prrB; two-component system, OmpR family, sensor histidine kinase PrrB [EC:2.7.13.3] D MSIM_33120 prrA_2; transcriptional regulatory protein PrrA K07671 prrA; two-component system, OmpR family, response regulator PrrA D MSIM_36850 trcS; two-component sensor histidine kinase K07656 trcS; two-component system, OmpR family, sensor histidine kinase TrcS [EC:2.7.13.3] D MSIM_36860 trcR; DNA-binding response regulator K07672 trcR; two-component system, OmpR family, response regulator TrcR D MSIM_26380 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D MSIM_30140 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D MSIM_26370 tcrX; putative transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator D MSIM_30130 phoP; DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D MSIM_31470 narL; putative transcriptional regulatory protein NarL K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D MSIM_48260 diguanylate cyclase K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3] D MSIM_48250 devR; transcriptional regulatory protein DevR (DosR) K07695 devR; two-component system, NarL family, response regulator DevR D MSIM_31480 histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3] D MSIM_11300 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D MSIM_11330 cheB; chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D MSIM_12330 ATPase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3] D MSIM_00710 transcriptional regulator K22010 pdtaR; two-component system, response regulator PdtaR C 02035 Bacterial motility proteins [BR:msim02035] D MSIM_11310 cheR; chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D MSIM_11300 hypothetical protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D MSIM_11330 cheB; chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D MSIM_28160 conjugal transfer protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins [BR:msim03037] D MSIM_54000 methyltransferase K00545 COMT; catechol O-methyltransferase [EC:2.1.1.6] C 04812 Cytoskeleton proteins [BR:msim04812] D MSIM_46350 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MSIM_12260 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D MSIM_25170 parA; chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D MSIM_53990 hypothetical protein K03496 parA; chromosome partitioning protein D MSIM_25180 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:msim04147] D MSIM_44240 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG D MSIM_23370 class I fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D MSIM_36760 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D MSIM_02410 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D MSIM_02400 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D MSIM_00810 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D MSIM_06140 hypothetical protein K00873 PK; pyruvate kinase [EC:2.7.1.40] D MSIM_25000 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D MSIM_26160 flotillin family protein K07192 FLOT; flotillin D MSIM_14830 groL1; 60 kDa chaperonin 1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_18110 groL_1; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_49500 groL_2; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D MSIM_19180 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK D MSIM_34670 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D MSIM_34020 hypothetical protein K01053 gnl; gluconolactonase [EC:3.1.1.17] D MSIM_14620 guaB3; putative oxidoreductase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D MSIM_14630 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D MSIM_16170 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D MSIM_39070 hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D MSIM_24510 putative Na+-dependent transporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D MSIM_35640 hypothetical protein K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_43580 AMP-dependent ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_45990 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] D MSIM_09550 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_20240 fadA2; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_29540 ltp3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_32640 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_33260 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_34750 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_37090 fadA3; acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_39890 fadA4; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40210 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_40460 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_44400 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_51280 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D MSIM_12940 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D MSIM_15540 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D MSIM_03860 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D MSIM_00210 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D MSIM_00220 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D MSIM_16670 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D MSIM_39910 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D MSIM_27520 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D MSIM_28420 glnT; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45490 glnA2; putative glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_45600 glnA1; glutamine synthetase 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51050 glnA3; glutamine synthetase GlnA K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_51550 type III glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_53180 glnN; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D MSIM_17380 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D MSIM_38180 putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D MSIM_08260 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_15610 serA2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_35770 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D MSIM_34800 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D MSIM_54000 methyltransferase K00545 COMT; catechol O-methyltransferase [EC:2.1.1.6] D MSIM_17890 lpdC; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D MSIM_08530 etfA; electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit D MSIM_02320 zwf2; glucose-6-phosphate 1-dehydrogenase 2 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_37580 zwf1; glucose-6-phosphate 1-dehydrogenase 1 K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_49840 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D MSIM_02390 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D MSIM_17650 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:msim02048] D MSIM_05480 hsdM; type I restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D MSIM_10200 hypothetical protein K07448 mrr; restriction system protein D MSIM_53170 hypothetical protein K07448 mrr; restriction system protein D MSIM_48850 hypothetical protein K28297 relB_F; antitoxin RelB/F D MSIM_46350 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D MSIM_08220 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D MSIM_08500 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:msim01504] D MSIM_20050 aac; aminoglycoside 2'-N-acetyltransferase K17840 aac2-I; aminoglycoside 2'-N-acetyltransferase I [EC:2.3.1.59] D MSIM_51670 blaR; hypothetical protein K02172 blaR1; bla regulator protein blaR1 D MSIM_51660 blaI; transcriptional regulator BlaI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D MSIM_05860 beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D MSIM_31300 lpqR; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:msim03100] D MSIM_t00090 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MSIM_t00200 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MSIM_t00350 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D MSIM_t00240 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MSIM_t00340 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MSIM_t00390 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MSIM_t00430 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D MSIM_t00470 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D MSIM_t00320 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D MSIM_t00040 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MSIM_t00490 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D MSIM_t00070 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MSIM_t00360 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D MSIM_t00060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MSIM_t00310 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D MSIM_t00030 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MSIM_t00170 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MSIM_t00450 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D MSIM_t00420 tRNA-His K14226 tRNA-His; tRNA His D MSIM_t00210 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D MSIM_t00010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00190 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00370 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00400 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D MSIM_t00300 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MSIM_t00410 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D MSIM_t00100 tRNA-Met K14230 tRNA-Met; tRNA Met D MSIM_t00130 tRNA-Met K14230 tRNA-Met; tRNA Met D MSIM_t00480 tRNA-Met K14230 tRNA-Met; tRNA Met D MSIM_t00330 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D MSIM_t00270 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MSIM_t00460 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MSIM_t00520 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D MSIM_t00220 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MSIM_t00230 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MSIM_t00250 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MSIM_t00260 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D MSIM_t00140 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MSIM_t00280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MSIM_t00290 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D MSIM_t00120 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D MSIM_t00150 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D MSIM_t00020 tRNA-Val K14237 tRNA-Val; tRNA Val D MSIM_t00050 tRNA-Val K14237 tRNA-Val; tRNA Val D MSIM_t00500 tRNA-Val K14237 tRNA-Val; tRNA Val D MSIM_t00180 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D MSIM_r00020 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D MSIM_r00030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D MSIM_tm00010 transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D MSIM_45050 S-(hydroxymethyl)mycothiol dehydrogenase K00153 E1.1.1.306; S-(hydroxymethyl)mycothiol dehydrogenase [EC:1.1.1.306] D MSIM_26120 decaprenylphospho-beta-D-erythro-pentofuranosid-2 -ulose 2-reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D MSIM_07990 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D MSIM_08000 putative oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D MSIM_52360 hypothetical protein K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D MSIM_18630 fgd; F420-dependent glucose-6-phosphate dehydrogenase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2] D MSIM_26130 putative oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D MSIM_01310 putative F420H(2)-dependent quinone reductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D MSIM_29310 deazaflavin-dependent nitroreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D MSIM_39060 putative F420H(2)-dependent quinone reductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D MSIM_40040 nitroreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-] D MSIM_09050 alcohol dehydrogenase K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24] D MSIM_50160 alcohol dehydrogenase K11173 ADHFE1; hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24] D MSIM_37790 NADP-dependent aryl-alcohol dehydrogenase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D MSIM_19020 carbon monoxyde dehydrogenase small subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3] D MSIM_19030 carbon monoxide dehydrogenase medium subunit K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3] D MSIM_19010 carbon-monoxide dehydrogenase large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3] D MSIM_24370 phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase K14728 K14728; phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase [EC:1.2.-.-] D MSIM_16080 mftC; putative mycofactocin radical SAM maturase MftC K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26] D MSIM_16850 oxidoreductase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D MSIM_40100 mbtN; acyl-[acyl-carrier-protein] dehydrogenase MbtN K00257 mbtN; acyl-ACP dehydrogenase [EC:1.3.99.-] D MSIM_16070 mftD; putative mycofactocin system heme/flavin oxidoreductase MftD K24693 mftD; pre-mycofactocin synthase [EC:1.4.3.26] D MSIM_23910 NADP oxidoreductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D MSIM_13790 lpdA; NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D MSIM_02270 qor; quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D MSIM_10850 fadB4; NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D MSIM_26410 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D MSIM_30700 alcohol dehydrogenase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D MSIM_43920 NADH oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D MSIM_06470 mtr; mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D MSIM_21880 msrA_1; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D MSIM_33400 msrA_2; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D MSIM_49680 msrA_3; peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D MSIM_04750 msrB_1; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D MSIM_33390 msrB_2; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D MSIM_49690 putative methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D MSIM_32920 glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D MSIM_35920 hypothetical protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D MSIM_42790 manganese catalase K07217 ydbD; manganese catalase [EC:1.11.1.6] D MSIM_48420 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D MSIM_00900 bcpB; putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D MSIM_41020 bcp; putative peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D MSIM_50280 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D MSIM_51150 ahpD; alkyl hydroperoxide reductase AhpD K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D MSIM_51140 ahpC; alkyl hydroperoxide reductase subunit C K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D MSIM_45230 putative peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29] D MSIM_30780 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D MSIM_21150 putative quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D MSIM_21790 short-chain dehydrogenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D MSIM_24710 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D MSIM_16320 carotenoid cleavage oxygenase K11159 K11159; carotenoid cleavage oxygenase [EC:1.13.11.-] D MSIM_14600 alpha-ketoglutarate-dependent sulfate ester dioxygenase K22303 atsK; alkyl sulfatase [EC:1.14.11.77] D MSIM_11170 N5,N10-methylene tetrahydromethanopterin reductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28] D MSIM_28770 TB11.2; heme-degrading monooxygenase HmoB K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D MSIM_10760 fprA; NADPH-ferredoxin reductase FprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D MSIM_33030 fprB_1; putative ferredoxin/ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D MSIM_43530 fprB_2; putative ferredoxin/ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D MSIM_36660 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D MSIM_12080 NrdH-redoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D MSIM_39380 hypothetical protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-] D MSIM_39390 hycQ; hydrogenase HycQ K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-] D MSIM_16710 oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-] D MSIM_22560 oxidoreductase K14189 dltE; uncharacterized oxidoreductase [EC:1.-.-.-] D MSIM_12400 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D MSIM_16430 mmaA2_1; cyclopropane mycolic acid synthase MmaA2 K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D MSIM_26010 mmaA2_3; cyclopropane mycolic acid synthase MmaA2 K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D MSIM_27200 putative fatty acid methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D MSIM_53210 cmaB_2; methoxy mycolic acid synthase MmaA3 K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D MSIM_19760 tam; putative trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D MSIM_50040 hypothetical protein K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365] D MSIM_16860 hypothetical protein K24667 htm; 2-heptyl-1-hydroxyquinolin-4(1H)-one methyltransferase [EC:2.1.1.374] D MSIM_01790 methyltransferase MtfB K05303 K05303; O-methyltransferase [EC:2.1.1.-] D MSIM_01820 methyltransferase MtfB K05303 K05303; O-methyltransferase [EC:2.1.1.-] D MSIM_11470 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-] D MSIM_46730 mdcH; malonate decarboxylase subunit epsilon K13935 mdcH; malonate decarboxylase epsilon subunit [EC:2.3.1.39] D MSIM_31010 mshD; mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D MSIM_47660 hypothetical protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D MSIM_42080 hypothetical protein K22797 octT; diglucosylglycerate octanoyltransferase [EC:2.3.1.273] D MSIM_42160 putative conserved polyketide synthase associated protein PapA3 K23156 papA3; mycolipenoyl-CoA---2-(long-chain-fatty acyl)-trehalose mycolipenoyltransferase / long-chain-acyl-CoA---trehalose acyltransferase [EC:2.3.1.278 2.3.1.279] D MSIM_07810 papA5; phthiocerol/phthiodiolone dimycocerosyl transferase K23414 papA5; phenolphthiocerol/phthiocerol/phthiodiolone dimycocerosyl transferase [EC:2.3.1.282] D MSIM_09960 siderophore biosynthesis protein K21992 mbtK; lysine N-acyltransferase [EC:2.3.1.-] D MSIM_40110 mbtK; lysine N-acyltransferase MbtK K21992 mbtK; lysine N-acyltransferase [EC:2.3.1.-] D MSIM_42140 PE-PPE domain-containing protein K22796 chp2; diacyltrehalose acyltransferase [EC:2.3.1.-] D MSIM_36070 acetyltransferase Pat K22886 K22886; protein lysine acetyltransferase [EC:2.3.1.-] D MSIM_20470 acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-] D MSIM_17670 mshA; D-inositol 3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D MSIM_46690 mdcB; triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D MSIM_00840 hypothetical protein K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D MSIM_08040 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D MSIM_45500 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D MSIM_46720 mdcG; malonate decarboxylase holo-ACP synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D MSIM_28820 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85] D MSIM_09990 UPF0061 protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D MSIM_38380 hypothetical protein K21014 stf0; trehalose 2-sulfotransferase [EC:2.8.2.37] D MSIM_19190 stf3; PAPS-dependent sulfotransferase Stf3 K22905 stf3; omega-hydroxy-beta-dihydromenaquinone-9 sulfotransferase [EC:2.8.2.40] D MSIM_07060 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D MSIM_10880 CoA transferase K18313 sct; succinyl-CoA---D-citramalate CoA-transferase [EC:2.8.3.20] D MSIM_47860 lipT; carboxylic ester hydrolase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D MSIM_12130 lipV; lipase LipV K19311 lipV; lipase [EC:3.1.1.-] D MSIM_15170 cut4; cutinase K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-] D MSIM_15180 cut2_1; putative cutinase cut2 K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-] D MSIM_27030 cut5; cutinase K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-] D MSIM_41390 putative cutinase K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-] D MSIM_44890 cutinase K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-] D MSIM_49860 putative cutinase K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-] D MSIM_49900 cutinase K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-] D MSIM_50050 cut2_2; putative cutinase cut2 K27358 cut1_2_4_7; cutinase-like protein [EC:3.1.1.-] D MSIM_25970 cutinase K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D MSIM_21340 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D MSIM_36490 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D MSIM_41530 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D MSIM_41440 plsC; L-3-phosphoserine phosphatase K15781 serB-plsC; putative phosphoserine phosphatase / 1-acylglycerol-3-phosphate O-acyltransferase [EC:3.1.3.3 2.3.1.51] D MSIM_21720 ptbB; phosphotyrosine protein phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48] D MSIM_42070 gpgP; glucosyl-3-phosphoglycerate phosphatase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D MSIM_25920 phosphatase PAP2 family protein K27842 E3.1.3.111; decaprenylphosphoryl-5-phosphoribose phosphatase [EC:3.1.3.111] D MSIM_39250 hypothetical protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D MSIM_26400 hydrolase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D MSIM_36410 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D MSIM_39870 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-] D MSIM_50030 prenyltransferase K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221] D MSIM_27400 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D MSIM_33280 hypothetical protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D MSIM_16060 mycofactocin system creatininase family protein K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14] D MSIM_51540 hypothetical protein K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14] D MSIM_18320 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D MSIM_38250 mshB; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D MSIM_37170 mca; mycothiol S-conjugate amidase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D MSIM_17730 hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D MSIM_52430 nitrile hydratase subunit beta K20760 scnA; thiocyanate hydrolase subunit alpha [EC:3.5.5.8] D MSIM_52440 thiocyanate hydrolase subunit gamma K20762 scnC; thiocyanate hydrolase subunit gamma [EC:3.5.5.8] D MSIM_02030 moxR1; ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D MSIM_11100 moxR3; methanol dehydrogenase transcriptional regulator MoxR K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D MSIM_27580 moxR2; ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D MSIM_43980 moxR; ATPase AAA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D MSIM_46710 mdcE; biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D MSIM_32580 kdc; alpha-keto-acid decarboxylase K21431 kdc; alpha-keto-acid decarboxylase [EC:4.1.1.-] D MSIM_14920 bifunctional NAD(P)H-hydrate repair enzyme K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D MSIM_37940 enoyl-CoA hydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149] D MSIM_29600 echA19; enoyl-CoA hydratase K28233 echA19; 3-oxochol-4,22-dien-24-oyl-CoA hydratase (R-form) [EC:4.2.1.-] D MSIM_40890 ATP-dependent acyl-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D MSIM_46870 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D MSIM_34880 accD2; acetyl-CoA carboxylase carboxyltransferase subunit K01970 accD2; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D MSIM_33150 accD3; putative acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D MSIM_34860 accA2; acetyl/propionyl-CoA carboxylase subuit alpha K27596 accA2; acyl-CoA carboxylase subunit alpha [EC:6.4.1.-] D MSIM_48450 ctpV; putative copper-exporting P-type ATPase V K12956 ctpV; copper-transporting P-type ATPase V [EC:7.2.2.8] D MSIM_13180 ctpC; putative manganese/zinc-exporting P-type ATPase K12950 ctpC; manganese-transporting P-type ATPase C [EC:7.2.2.22] D MSIM_35970 ctpD; putative cobalt/nickel-exporting P-type ATPase K12951 ctpD; cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-] D MSIM_33200 ctpE; putative cation-transporting ATPase E K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-] D MSIM_22460 ctpI; haloacid dehalogenase K12955 ctpI; cation-transporting P-type ATPase I [EC:7.2.2.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D MSIM_07290 fdhD; sulfurtransferase FdhD K02379 fdhD; FdhD protein D MSIM_10360 fer; ferredoxin K05337 fer; ferredoxin D MSIM_29700 fdxD; ferredoxin FdxD K05337 fer; ferredoxin D MSIM_32000 ferredoxin K05337 fer; ferredoxin D MSIM_32020 ferredoxin K05337 fer; ferredoxin D MSIM_32080 hypothetical protein K05337 fer; ferredoxin D MSIM_32270 ferredoxin K05337 fer; ferredoxin D MSIM_40860 ferredoxin K05337 fer; ferredoxin D MSIM_02160 iron-sulfur cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins D MSIM_37860 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D MSIM_47760 hypothetical protein K02448 norD; nitric oxide reductase NorD protein D MSIM_32470 ctaE_1; cytochrome b6 K02164 norE; nitric oxide reductase NorE protein D MSIM_37870 cbbQ; CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein D MSIM_47750 norQ; CbbQ/NirQ/NorQ/GpvN family protein K04748 norQ; nitric oxide reductase NorQ protein D MSIM_08540 etfB; electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D MSIM_16270 fadE8; acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase D MSIM_01560 MbtH-like protein K16227 gplH; glycopeptidolipid biosynthesis protein D MSIM_01550 putative non-ribosomal peptide synthetase K16228 mps1; glycopeptidolipid biosynthesis protein D MSIM_01540 non-ribosomal peptide synthetase K16229 mps2; glycopeptidolipid biosynthesis protein D MSIM_11820 non-ribosomal peptide synthetase K16229 mps2; glycopeptidolipid biosynthesis protein D MSIM_49020 hypothetical protein K22618 olsE; ornithine lipid hydroxylase D MSIM_42090 DegV domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit C 99984 Nucleotide metabolism D MSIM_09290 nrdI; protein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D MSIM_39470 yaeR_1; glyoxalase K08234 yaeR; glyoxylase I family protein D MSIM_46370 UPF0001 protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D MSIM_32850 hypothetical protein K21687 rpfA; resuscitation-promoting factor RpfA D MSIM_36420 rpfB; resuscitation-promoting factor RpfB K21688 rpfB; resuscitation-promoting factor RpfB D MSIM_50880 hypothetical protein K21689 rpfC; resuscitation-promoting factor RpfC D MSIM_41750 hypothetical protein K21691 rpfE; resuscitation-promoting factor RpfE D MSIM_16650 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein D MSIM_28330 transferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase D MSIM_16050 glycosyl transferase family 2 K24698 mftF; mycofactocin glycosyltransferase C 99987 Cofactor metabolism D MSIM_16090 mftB; putative mycofactocin system protein MftB K24695 mftB; mycofactocin biosynthesis protein MftB C 99988 Secondary metabolism D MSIM_13730 lpqC; esterase K03932 lpqC; polyhydroxybutyrate depolymerase D MSIM_21570 alpha/beta hydrolase K24084 aidA; quorum-quenching protein AidA C 99999 Others D MSIM_09840 glyoxalase K15975 K15975; glyoxalase family protein D MSIM_08340 membrane protein K15977 K15977; putative oxidoreductase D MSIM_09630 membrane protein K15977 K15977; putative oxidoreductase D MSIM_37660 hypothetical protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D MSIM_23830 cold-shock protein K03704 cspA; cold shock protein D MSIM_28240 cspA; cold-shock protein K03704 cspA; cold shock protein D MSIM_32900 cold-shock protein K03704 cspA; cold shock protein D MSIM_53440 cold-shock protein K03704 cspA; cold shock protein C 99974 Translation C 99975 Protein processing D MSIM_39960 clpS; ATP-dependent Clp protease adapter protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D MSIM_41670 tig; trigger factor K03545 tig; trigger factor D MSIM_51610 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein D MSIM_51470 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D MSIM_51460 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein D MSIM_10700 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D MSIM_06590 hypC_1; hydantoin utilization protein C K04653 hypC; hydrogenase expression/formation protein HypC D MSIM_06640 hypC_2; hydrogenase assembly protein HupF K04653 hypC; hydrogenase expression/formation protein HypC D MSIM_06650 hypD; hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D MSIM_06630 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D MSIM_06600 hypF; carbamoyltransferase K04656 hypF; hydrogenase maturation protein HypF D MSIM_09300 nrdH; NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH D MSIM_07270 hypothetical protein K07391 comM; magnesium chelatase family protein D MSIM_17210 cytochrome c biogenesis protein K07399 resB; cytochrome c biogenesis protein D MSIM_19000 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D MSIM_19040 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D MSIM_12140 DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D MSIM_07280 UPF0102 protein K07460 yraN; putative endonuclease D MSIM_47100 hypothetical protein K07465 K07465; putative RecB family exonuclease D MSIM_07080 dprA; putative DNA processing protein DprA K04096 smf; DNA processing protein D MSIM_03370 ATPase AAA K07478 ycaJ; putative ATPase D MSIM_27170 IS30 family transposase K07482 K07482; transposase, IS30 family D MSIM_48820 hypothetical protein K07483 K07483; transposase D MSIM_53640 hypothetical protein K07497 K07497; putative transposase D MSIM_53650 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D MSIM_05360 35 kDa protein K03969 pspA; phage shock protein A D MSIM_27280 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D MSIM_12990 cationic amino acid transport integral membrane protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D MSIM_17080 putative transporter K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D MSIM_43320 rocE; amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D MSIM_17030 pit; putative low-affinity inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D MSIM_41340 transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D MSIM_25150 hypothetical protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D MSIM_38220 GTP-binding protein K06207 typA; GTP-binding protein D MSIM_42720 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D MSIM_37300 phoH2; ATP-binding protein K07175 phoH2; PhoH-like ATPase D MSIM_16800 UPF0234 protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D MSIM_28320 membrane protein K09153 K09153; small membrane protein C 99994 Others D MSIM_04540 phoU2_1; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D MSIM_04570 phoU2_2; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D MSIM_31060 phoU2_3; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D MSIM_32570 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D MSIM_51090 hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin D MSIM_30360 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport D MSIM_11250 hypothetical protein K20467 K20467; heme-binding protein D MSIM_20820 hypothetical protein K20467 K20467; heme-binding protein B B 09194 Poorly characterized C 99996 General function prediction only D MSIM_06440 UPF0039 protein K02348 elaA; ElaA protein D MSIM_25490 PHP domain-containing protein K04477 ycdX; putative hydrolase D MSIM_28230 helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein D MSIM_01400 glbN; group 1 truncated hemoglobin GlbN K06886 glbN; hemoglobin D MSIM_33320 hypothetical protein K06886 glbN; hemoglobin D MSIM_41570 glbO; group 2 truncated hemoglobin GlbO K06886 glbN; hemoglobin D MSIM_01580 membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_01590 transporter K06994 K06994; putative drug exporter of the RND superfamily D MSIM_08420 mmpL6_1; membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_08700 membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_09240 putative membrane protein, MmpL family K06994 K06994; putative drug exporter of the RND superfamily D MSIM_10020 mmpL4_1; siderophore exporter MmpL4 K06994 K06994; putative drug exporter of the RND superfamily D MSIM_18010 mmpL4_2; membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_24000 putative membrane protein, MmpL family K06994 K06994; putative drug exporter of the RND superfamily D MSIM_33700 mmpL6_2; membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_36510 putative membrane protein, MmpL family K06994 K06994; putative drug exporter of the RND superfamily D MSIM_38040 mmpL13_1; membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_41160 mmpL13_2; membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_42100 membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_42150 putative membrane protein, MmpL family K06994 K06994; putative drug exporter of the RND superfamily D MSIM_42510 putative membrane protein, MmpL family K06994 K06994; putative drug exporter of the RND superfamily D MSIM_43810 mmpL6_3; membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_48290 membrane protein K06994 K06994; putative drug exporter of the RND superfamily D MSIM_16610 membrane protein K07001 K07001; NTE family protein D MSIM_37000 hypothetical protein K07001 K07001; NTE family protein D MSIM_37010 putative NTE family protein K07001 K07001; NTE family protein D MSIM_47990 membrane protein K07001 K07001; NTE family protein D MSIM_02200 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D MSIM_02190 UPF0051 protein K09015 sufD; Fe-S cluster assembly protein SufD D MSIM_20440 php; phosphotriesterase K07048 PTER; phosphotriesterase-related protein D MSIM_02140 hypothetical protein K07058 K07058; membrane protein D MSIM_05040 hypothetical protein K07058 K07058; membrane protein D MSIM_14140 inner membrane protein YhjD K07058 K07058; membrane protein D MSIM_46420 hypothetical protein K07100 K07100; putative phosphoribosyl transferase D MSIM_47640 fxsA; membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA D MSIM_13630 putative SufE-like protein K02426 sufE; cysteine desulfuration protein SufE D MSIM_33040 hypothetical protein K04750 phnB; PhnB protein D MSIM_18890 putative membrane protein K03975 dedA; membrane-associated protein D MSIM_40620 hypothetical protein K01421 yhgE; putative membrane protein D MSIM_50660 membrane protein K08972 K08972; putative membrane protein D MSIM_03940 membrane protein K08987 K08987; putative membrane protein D MSIM_44040 UPF0225 protein K09858 K09858; SEC-C motif domain protein C 99997 Function unknown D MSIM_20780 hypothetical protein K06860 K06860; putative heme uptake system protein D MSIM_37190 hypothetical protein K06888 K06888; uncharacterized protein D MSIM_03090 hypothetical protein K06893 K06893; uncharacterized protein D MSIM_21830 hypothetical protein K06893 K06893; uncharacterized protein D MSIM_14330 ATP/GTP-binding protein K06945 K06945; uncharacterized protein D MSIM_07390 UPF0109 protein K06960 K06960; uncharacterized protein D MSIM_24720 N-acetyltransferase K06975 K06975; uncharacterized protein D MSIM_33730 hypothetical protein K06975 K06975; uncharacterized protein D MSIM_06760 N-acetyltransferase GCN5 K06976 K06976; uncharacterized protein D MSIM_06020 hydrolase K06978 K06978; uncharacterized protein D MSIM_30540 hypothetical protein K06986 K06986; uncharacterized protein D MSIM_01290 hypothetical protein K07005 K07005; uncharacterized protein D MSIM_10790 pyridoxamine 5'-phosphate oxidase K07005 K07005; uncharacterized protein D MSIM_02680 pyridoxamine 5'-phosphate oxidase K07006 K07006; uncharacterized protein D MSIM_09720 hypothetical protein K07006 K07006; uncharacterized protein D MSIM_27010 PPOX class F420-dependent oxidoreductase K07006 K07006; uncharacterized protein D MSIM_47610 PPOX class F420-dependent oxidoreductase K07006 K07006; uncharacterized protein D MSIM_49920 hypothetical protein K07006 K07006; uncharacterized protein D MSIM_18400 hypothetical protein K07020 K07020; uncharacterized protein D MSIM_05820 hypothetical protein K07044 K07044; uncharacterized protein D MSIM_19220 amidohydrolase K07045 K07045; uncharacterized protein D MSIM_29630 hypothetical protein K07045 K07045; uncharacterized protein D MSIM_32130 amidohydrolase K07045 K07045; uncharacterized protein D MSIM_32140 amidohydrolase K07045 K07045; uncharacterized protein D MSIM_40430 amidohydrolase K07045 K07045; uncharacterized protein D MSIM_40660 amidohydrolase K07045 K07045; uncharacterized protein D MSIM_40670 amidohydrolase K07045 K07045; uncharacterized protein D MSIM_50670 hypothetical protein K07045 K07045; uncharacterized protein D MSIM_51040 hypothetical protein K07045 K07045; uncharacterized protein D MSIM_03500 hypothetical protein K07054 K07054; uncharacterized protein D MSIM_08580 nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein D MSIM_45650 epimerase family protein K07071 K07071; uncharacterized protein D MSIM_30550 KsdD-like steroid dehydrogenase K07077 K07077; uncharacterized protein D MSIM_42460 sodium-dependent bicarbonate transport family permease K07086 K07086; uncharacterized protein D MSIM_04290 hypothetical protein K07089 K07089; uncharacterized protein D MSIM_07850 membrane protein K07089 K07089; uncharacterized protein D MSIM_36010 hypothetical protein K07089 K07089; uncharacterized protein D MSIM_04370 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D MSIM_46240 UPF0721 transmembrane protein K07090 K07090; uncharacterized protein D MSIM_22080 phosphoesterase K07095 K07095; uncharacterized protein D MSIM_27870 hypothetical protein K07098 K07098; uncharacterized protein D MSIM_01380 ketoacyl reductase K07124 K07124; uncharacterized protein D MSIM_10190 dehydrogenase K07124 K07124; uncharacterized protein D MSIM_14350 serine protease inhibitor K07131 K07131; uncharacterized protein D MSIM_49910 molybdenum cofactor biosysynthesis protein K07140 K07140; MOSC domain-containing protein D MSIM_18270 ATP-dependent protease K07157 K07157; uncharacterized protein D MSIM_18960 hypothetical protein K07161 K07161; uncharacterized protein D MSIM_42040 hypothetical protein K07161 K07161; uncharacterized protein D MSIM_45410 hypothetical protein K07164 K07164; uncharacterized protein D MSIM_25130 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein D MSIM_51780 hypothetical protein K08999 K08999; uncharacterized protein D MSIM_36780 hypothetical protein K09009 K09009; uncharacterized protein D MSIM_27620 hypothetical protein K09117 K09117; uncharacterized protein D MSIM_11980 UPF0182 protein K09118 K09118; uncharacterized protein D MSIM_00600 hypothetical protein K09146 K09146; uncharacterized protein D MSIM_50330 hypothetical protein K09166 K09166; uncharacterized protein D MSIM_47120 hypothetical protein K09764 K09764; uncharacterized protein D MSIM_10040 ABC transporter K09781 K09781; uncharacterized protein D MSIM_54200 hypothetical protein K09791 K09791; uncharacterized protein D MSIM_28350 membrane protein K09799 K09799; uncharacterized protein D MSIM_28470 lpqG; SIMPL domain-containing protein K09807 K09807; uncharacterized protein D MSIM_05490 hypothetical protein K09927 K09927; uncharacterized protein D MSIM_17090 hypothetical protein K09931 K09931; uncharacterized protein D MSIM_26540 hypothetical protein K09957 K09957; uncharacterized protein D MSIM_02750 hypothetical protein K09958 K09958; uncharacterized protein D MSIM_21700 hypothetical protein K09958 K09958; uncharacterized protein D MSIM_17930 hypothetical protein K09959 K09959; uncharacterized protein D MSIM_26620 hypothetical protein K09966 K09966; uncharacterized protein D MSIM_48330 hypothetical protein K09990 K09990; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 17, 2025