+D GENES KO #

  KEGG Orthology (KO) - Microbulbifer thermotolerans

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:mthd00010] D A3224_13685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A3224_11515 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_05515 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_04225 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A3224_10020 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_01565 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_14440 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3224_03815 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A3224_08605 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_04800 gapA; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_08205 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_14445 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A3224_14920 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D A3224_10550 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3224_04805 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A3224_07900 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D A3224_12375 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3224_12370 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_16125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A3224_01785 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_01480 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_04345 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_15835 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A3224_04125 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D A3224_15230 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] C 00020 Citrate cycle (TCA cycle) [PATH:mthd00020] D A3224_05380 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A3224_12935 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D A3224_08970 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D A3224_07985 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A3224_05410 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D A3224_05415 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_05430 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A3224_05425 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A3224_15615 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D A3224_05395 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A3224_05400 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A3224_05385 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A3224_05390 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A3224_10705 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D A3224_09390 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A3224_07820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A3224_15230 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D A3224_12375 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3224_12370 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:mthd00030] D A3224_11515 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_05515 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_04785 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3224_04790 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D A3224_06715 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A3224_02075 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A3224_14510 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3224_12060 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D A3224_14165 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D A3224_15835 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A3224_00320 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A3224_04855 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A3224_04780 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D A3224_04795 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A3224_10270 hypothetical protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D A3224_01845 hypothetical protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D A3224_00405 ketodeoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D A3224_10020 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_01565 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_14440 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3224_04225 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:mthd00040] D A3224_01875 hypothetical protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D A3224_01880 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D A3224_01885 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D A3224_00420 cupin K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D A3224_01825 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D A3224_10065 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D A3224_01840 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D A3224_13220 bifunctional D-altronate/D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D A3224_01835 mannitol dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D A3224_13925 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A3224_02645 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3224_02075 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A3224_13600 hypothetical protein K14274 xylC; xylono-1,5-lactonase [EC:3.1.1.110] D A3224_13585 dihydroxy-acid dehydratase K22186 xylD; xylonate dehydratase [EC:4.2.1.82] D A3224_13590 aldehyde dehydrogenase K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-] D A3224_01545 class II aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:mthd00051] D A3224_13320 hypothetical protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D A3224_13285 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A3224_05535 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A3224_02615 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D A3224_02650 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A3224_15835 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A3224_01545 class II aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D A3224_05770 hypothetical protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D A3224_04225 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A3224_13290 mannitol dehydrogenase K00045 E1.1.1.67; mannitol 2-dehydrogenase [EC:1.1.1.67] D A3224_00430 alginate lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D A3224_00960 hypothetical protein K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3] D A3224_10020 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_01565 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_14440 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3224_03815 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A3224_05530 hypothetical protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80] C 00052 Galactose metabolism [PATH:mthd00052] D A3224_02020 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3224_09335 epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3224_02645 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3224_15835 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A3224_13685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A3224_08770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A3224_04225 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A3224_13280 3-oxoacyl-ACP reductase K22215 galD; galactose dehydrogenase [EC:1.1.1.48 1.1.1.120] D A3224_10085 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D A3224_10200 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D A3224_10050 hypothetical protein K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D A3224_10170 hypothetical protein K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D A3224_10100 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D A3224_10165 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D A3224_05540 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D A3224_13130 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:mthd00053] D A3224_13925 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_10175 mandelate racemase K18983 gci; D-galactarolactone cycloisomerase [EC:5.5.1.27] C 00500 Starch and sucrose metabolism [PATH:mthd00500] D A3224_05540 hypothetical protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D A3224_13130 alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D A3224_05760 alpha-amylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7] D A3224_02645 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3224_13210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13580 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13770 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_10585 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_10605 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13240 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_13315 glycosyl hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_13335 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_06300 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_10595 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_13225 glycoside hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_13325 cellobiohydrolase K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91] D A3224_12595 alpha-dextran endo-1,6-alpha-glucosidase K01200 pulA; pullulanase [EC:3.2.1.41] D A3224_13645 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D A3224_13650 alpha-amlyase K01176 AMY; alpha-amylase [EC:3.2.1.1] D A3224_13665 alpha-amylase K00701 cgt; cyclomaltodextrin glucanotransferase [EC:2.4.1.19] D A3224_09025 glycoside hydrolase K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64] D A3224_15835 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A3224_13685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A3224_11515 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_05515 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_13285 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A3224_05535 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:mthd00520] D A3224_11035 glycosyl hydrolase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D A3224_11045 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D A3224_03705 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D A3224_06295 hypothetical protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D A3224_08635 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D A3224_04080 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D A3224_11175 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D A3224_04745 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D A3224_04735 ATPase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D A3224_04105 ATPase K18676 gspK; glucosamine kinase [EC:2.7.1.8] D A3224_13285 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A3224_05535 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D A3224_04740 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3224_16165 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3224_03810 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D A3224_16190 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D A3224_04100 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D A3224_02265 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D A3224_06885 phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D A3224_02065 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D A3224_02070 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D A3224_05060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A3224_08455 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A3224_03525 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D A3224_13575 xylan 1,4-beta-xylosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D A3224_13685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A3224_15835 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A3224_02645 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3224_13925 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A3224_02020 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3224_09335 epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3224_08770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A3224_11515 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_05515 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_02650 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A3224_02615 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:mthd00620] D A3224_01480 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_04345 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_12375 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3224_12370 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_01785 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D A3224_16125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A3224_04805 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A3224_10615 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A3224_02155 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A3224_02150 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A3224_05710 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_15615 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D A3224_06480 hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D A3224_10060 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D A3224_10130 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D A3224_06765 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D A3224_09165 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D A3224_13100 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D A3224_07270 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D A3224_15690 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D A3224_09765 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D A3224_09760 oxaloacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D A3224_09770 sodium pump decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D A3224_07820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A3224_10705 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D A3224_09390 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A3224_01370 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D A3224_15230 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D A3224_07900 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D A3224_07935 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_02875 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:mthd00630] D A3224_07925 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D A3224_01480 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_04345 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_07935 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9] D A3224_07820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A3224_05380 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1] D A3224_12935 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D A3224_08970 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_13715 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D A3224_13720 glcE; glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D A3224_13725 glcF; glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D A3224_00130 catalase K03781 katE; catalase [EC:1.11.1.6] D A3224_03205 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D A3224_07740 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D A3224_15295 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_06790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_07855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_12650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3224_11555 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A3224_14100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_14095 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D A3224_02945 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D A3224_10060 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D A3224_10130 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D A3224_04795 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D A3224_11560 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:mthd00640] D A3224_01480 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_04345 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_16185 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3224_16180 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3224_16175 hypothetical protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_09120 quinone oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_10615 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A3224_02155 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A3224_02150 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A3224_05710 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A3224_09680 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A3224_14355 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A3224_05425 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A3224_05430 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A3224_13805 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3224_09685 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3224_08510 citrate synthase/methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D A3224_08495 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D A3224_08505 Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117] D A3224_08500 3-methylitaconate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-] D A3224_08970 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D A3224_08515 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D A3224_02965 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] C 00650 Butanoate metabolism [PATH:mthd00650] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_10125 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17] D A3224_12250 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D A3224_09760 oxaloacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D A3224_05395 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A3224_05400 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A3224_05385 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A3224_05390 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A3224_04325 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3224_11355 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_14360 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_15615 acetyl-CoA hydrolase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D A3224_01660 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3224_09885 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A3224_14805 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] D A3224_02820 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3224_05960 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3224_02825 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A3224_10070 Zn-dependent alcohol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303] C 00660 C5-Branched dibasic acid metabolism [PATH:mthd00660] D A3224_02820 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3224_05960 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3224_02825 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A3224_05425 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A3224_05430 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A3224_05660 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D A3224_05665 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D A3224_05670 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:mthd00562] D A3224_11450 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A3224_12830 hypothetical protein K01083 E3.1.3.8; 3-phytase [EC:3.1.3.8] D A3224_07295 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D A3224_07290 hypothetical protein K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34] D A3224_13805 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3224_09685 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3224_03815 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:mthd00190] D A3224_11225 NADH:ubiquinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D A3224_11230 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D A3224_11235 NADH-quinone oxidoreductase subunit C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D A3224_11240 NADH dehydrogenase K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D A3224_11245 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D A3224_11250 hypothetical protein K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D A3224_11255 NADH:ubiquinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D A3224_11260 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D A3224_11265 NADH dehydrogenase K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D A3224_11270 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D A3224_11275 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D A3224_11285 hypothetical protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D A3224_13035 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D A3224_05395 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A3224_05400 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A3224_05385 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A3224_05390 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A3224_05110 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A3224_05115 ubiquinol-cytochrome C reductase K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A3224_00250 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A3224_00225 MFS transporter K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D A3224_00215 cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D A3224_00210 cytochrome B559 subunit alpha K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D A3224_00220 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D A3224_00245 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D A3224_11090 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D A3224_11085 cytochrome C oxidase Cbb3 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D A3224_11080 cytochrome C oxidase Cbb3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D A3224_11075 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D A3224_03510 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D A3224_03505 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D A3224_16225 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A3224_16215 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A3224_16220 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A3224_16230 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A3224_16210 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A3224_16245 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A3224_16235 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A3224_16240 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A3224_13140 metal-transporting ATPase K01535 PMA1; H+-transporting ATPase [EC:7.1.2.1] D A3224_04210 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D A3224_12865 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:mthd00710] D A3224_14445 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A3224_08605 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_04800 gapA; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_08205 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_10020 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_01565 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_14440 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3224_14510 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D A3224_14165 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D A3224_03815 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D A3224_02075 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D A3224_12060 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D A3224_01370 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D A3224_15230 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D A3224_15690 malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D A3224_07820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:mthd00720] D A3224_07900 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D A3224_01370 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D A3224_07820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A3224_10705 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D A3224_09390 aspA; aspartate ammonia-lyase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D A3224_05395 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D A3224_05400 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D A3224_05385 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D A3224_05390 succinate dehydrogenase K00242 sdhD; succinate dehydrogenase membrane anchor subunit D A3224_05430 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D A3224_05425 sucC; succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_07985 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A3224_12935 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D A3224_08970 aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D A3224_10615 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A3224_02155 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A3224_02150 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A3224_05710 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A3224_08855 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A3224_14530 methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A3224_01480 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_04345 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:mthd00680] D A3224_16125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A3224_16130 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D A3224_03470 S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D A3224_12650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3224_03205 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D A3224_10550 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3224_01370 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D A3224_07820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A3224_10020 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_01565 aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_14440 fructose-1,6-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D A3224_04225 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D A3224_01480 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_04345 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_07900 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D A3224_14920 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D A3224_14425 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A3224_06905 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A3224_01625 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:mthd00910] D A3224_03900 antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D A3224_03980 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D A3224_03920 narZ; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D A3224_03925 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D A3224_03935 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D A3224_08730 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A3224_15295 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_06790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_07855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_01085 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3224_01090 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A3224_04570 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D A3224_12350 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:mthd00920] D A3224_05085 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D A3224_08835 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D A3224_15190 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D A3224_00025 phosphoadenylylsulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D A3224_05485 hypothetical protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D A3224_07535 sulfite reductase K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D A3224_01110 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3224_07420 rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3224_01520 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D A3224_04200 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D A3224_15195 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D A3224_00915 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D A3224_05735 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D A3224_01725 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D A3224_09375 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:mthd00061] D A3224_10615 acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D A3224_02155 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D A3224_02150 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D A3224_05710 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D A3224_07775 acyl carrier protein K02078 acpP; acyl carrier protein D A3224_07765 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A3224_09225 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D A3224_02635 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A3224_07780 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A3224_00410 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_10090 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_07770 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_10975 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_02640 beta-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D A3224_06185 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A3224_12250 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D A3224_09365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:mthd00071] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_09210 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_10420 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3224_14195 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8] D A3224_07915 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D A3224_07435 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3224_09365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A3224_04565 rubredoxin--NAD(+) reductase K05297 rubB; rubredoxin---NAD+ reductase [EC:1.18.1.1] D A3224_16125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A3224_01785 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis [PATH:mthd00100] D A3224_03325 hypothetical protein K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20] C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:mthd00561] D A3224_02945 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_10025 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A3224_07760 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D A3224_01950 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D A3224_14385 lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D A3224_05935 lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:mthd00564] D A3224_05610 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D A3224_01950 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D A3224_04585 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D A3224_04595 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D A3224_04555 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D A3224_02995 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D A3224_03720 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D A3224_06155 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D A3224_02835 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D A3224_01105 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D A3224_08435 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D A3224_12610 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D A3224_12390 hypothetical protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:mthd00565] D A3224_04585 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D A3224_04595 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:mthd00600] D A3224_11175 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] C 00590 Arachidonic acid metabolism [PATH:mthd00590] D A3224_04585 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D A3224_04595 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D A3224_01620 aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] C 00591 Linoleic acid metabolism D A3224_04585 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D A3224_04595 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:mthd00592] D A3224_04585 hypothetical protein K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D A3224_04595 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D A3224_09210 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:mthd01040] D A3224_11465 stearoyl-CoA 9-desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D A3224_10810 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D A3224_08405 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D A3224_16040 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:mthd00230] D A3224_13860 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D A3224_15835 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A3224_00320 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A3224_04855 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D A3224_05730 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D A3224_02120 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D A3224_10745 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D A3224_05455 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D A3224_10740 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D A3224_00135 phosphoribosylaminoimidazole carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D A3224_03455 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D A3224_07965 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D A3224_02125 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A3224_07875 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D A3224_15205 haloacid dehalogenase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D A3224_02795 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D A3224_05985 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A3224_11400 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A3224_00930 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D A3224_05990 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A3224_15895 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D A3224_00325 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3224_05560 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3224_05555 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A3224_03970 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D A3224_15905 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D A3224_12870 phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D A3224_06470 relA; (p)ppGpp synthetase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D A3224_09515 hypothetical protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D A3224_01180 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D A3224_06485 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A3224_06475 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A3224_13850 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D A3224_02040 diadenosine tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D A3224_08835 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D A3224_05085 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:mthd00240] D A3224_03635 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A3224_03630 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A3224_11535 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D A3224_11100 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D A3224_12570 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D A3224_08725 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D A3224_15855 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D A3224_06945 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D A3224_06140 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D A3224_11400 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A3224_06475 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A3224_04965 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D A3224_10560 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D A3224_06920 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D A3224_07875 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D A3224_03970 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D A3224_05360 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D A3224_00325 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3224_05560 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3224_05555 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D A3224_07795 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D A3224_14030 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D A3224_02980 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A3224_08940 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:mthd00250] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A3224_06390 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D A3224_06260 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D A3224_09500 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D A3224_09570 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3224_10780 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A3224_06250 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D A3224_11095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3224_00870 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3224_01180 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D A3224_07965 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D A3224_11535 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D A3224_04325 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3224_11355 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_14360 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_01085 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3224_01090 glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D A3224_08730 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A3224_07225 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D A3224_15295 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_06790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_07855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_03635 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A3224_03630 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A3224_04740 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3224_16165 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3224_05730 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:mthd00260] D A3224_09995 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3224_12435 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3224_05675 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3224_05680 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3224_06265 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A3224_06270 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D A3224_12650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3224_03205 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D A3224_14920 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D A3224_02945 hypothetical protein K15918 GLYK; D-glycerate 3-kinase [EC:2.7.1.31] D A3224_14425 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A3224_06905 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A3224_01625 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D A3224_05945 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D A3224_05940 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D A3224_11555 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A3224_14100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_14095 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D A3224_02835 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D A3224_07365 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D A3224_14160 PLP-dependent threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A3224_11000 serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A3224_05705 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D A3224_05700 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D A3224_12445 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A3224_12450 diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178] D A3224_12440 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108] C 00270 Cysteine and methionine metabolism [PATH:mthd00270] D A3224_01520 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D A3224_04200 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D A3224_15195 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D A3224_07545 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A3224_11570 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D A3224_14520 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A3224_05435 S-methyl-5'-thioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D A3224_02795 laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D A3224_06895 N-ethylammeline chlorohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D A3224_08880 histidine kinase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D A3224_01930 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3224_14525 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A3224_08805 hypothetical protein K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7] D A3224_09995 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3224_12435 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3224_05675 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3224_05680 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3224_06265 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A3224_00915 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D A3224_05860 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D A3224_12480 Cys/Met metabolism pyridoxal-phosphate-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D A3224_05735 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D A3224_13935 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_03070 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_15700 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D A3224_01010 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A3224_01110 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3224_07420 rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3224_07820 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D A3224_07365 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D A3224_06465 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D A3224_14425 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A3224_06905 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:mthd00280] D A3224_13935 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_03070 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_06735 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D A3224_16185 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3224_16180 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3224_16175 hypothetical protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_10420 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D A3224_01640 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_09210 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D A3224_12690 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D A3224_13805 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3224_09685 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_09680 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A3224_14355 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A3224_01655 3-methylcrotonyl-CoA carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D A3224_01645 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D A3224_01650 gamma-carboxygeranoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D A3224_01660 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3224_09885 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:mthd00290] D A3224_14160 PLP-dependent threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A3224_11000 serine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D A3224_05660 isopropylmalate isomerase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D A3224_05665 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D A3224_05670 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D A3224_02820 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3224_05960 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3224_02825 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A3224_02830 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D A3224_13985 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A3224_13935 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_03070 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_06735 amino acid dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D A3224_09570 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3224_02875 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:mthd00300] D A3224_06265 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D A3224_09995 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3224_12435 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3224_05675 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3224_05680 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3224_12230 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A3224_03615 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D A3224_06100 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D A3224_05570 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D A3224_06115 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D A3224_06095 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A3224_00850 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D A3224_00855 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D A3224_05205 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3224_05210 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:mthd00310] D A3224_05415 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_07435 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_11355 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_14360 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_03245 FAD-linked oxidase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D A3224_07480 CoA-transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00220 Arginine biosynthesis [PATH:mthd00220] D A3224_05565 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D A3224_11095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3224_00870 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3224_09720 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] D A3224_09715 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D A3224_15295 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_06790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_07855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_03635 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D A3224_03630 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D A3224_08730 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A3224_09570 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3224_13980 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D A3224_05270 argJ; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D A3224_15840 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D A3224_02245 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D A3224_05570 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D A3224_13975 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:mthd00330] D A3224_01460 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D A3224_04605 ornithine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D A3224_01445 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D A3224_01450 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D A3224_06785 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_14415 aldehyde dehydrogenase K12254 kauB; 4-guanidinobutyraldehyde dehydrogenase / NAD-dependent aldehyde dehydrogenase [EC:1.2.1.54 1.2.1.-] D A3224_03285 aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D A3224_07860 oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-] D A3224_00900 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D A3224_07225 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D A3224_02675 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D A3224_04260 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:mthd00340] D A3224_05065 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D A3224_01175 hisZ; ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D A3224_15560 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D A3224_15565 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D A3224_12565 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D A3224_14950 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D A3224_14955 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D A3224_14945 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D A3224_14960 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D A3224_12495 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3224_05070 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D A3224_14790 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D A3224_14785 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D A3224_14775 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D A3224_14770 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_08075 dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44] C 00350 Tyrosine metabolism [PATH:mthd00350] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A3224_12495 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3224_00690 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A3224_07130 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D A3224_00700 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] D A3224_16125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A3224_01785 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D A3224_05630 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D A3224_11355 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_14360 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00360 Phenylalanine metabolism [PATH:mthd00360] D A3224_07465 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A3224_12495 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3224_00690 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A3224_01500 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D A3224_04770 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:mthd00380] D A3224_02975 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11] D A3224_05415 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_07435 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_00130 catalase K03781 katE; catalase [EC:1.11.1.6] D A3224_01500 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D A3224_04770 peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:mthd00400] D A3224_07145 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A3224_07630 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A3224_01080 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D A3224_02160 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D A3224_00155 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D A3224_01075 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D A3224_06825 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D A3224_06915 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D A3224_05645 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D A3224_02080 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D A3224_02090 anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D A3224_02095 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D A3224_05695 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D A3224_02100 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D A3224_05705 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D A3224_05700 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D A3224_06910 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A3224_12495 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3224_07465 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:mthd00410] D A3224_01475 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D A3224_04325 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_01470 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D A3224_02980 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A3224_09680 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A3224_14355 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_13805 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] D A3224_09685 methylmalonate-semialdehyde dehydrogenase (acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27] C 00430 Taurine and hypotaurine metabolism [PATH:mthd00430] D A3224_04325 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3224_15800 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A3224_10780 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D A3224_08730 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:mthd00450] D A3224_07545 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A3224_11570 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D A3224_09310 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D A3224_08020 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D A3224_05085 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D A3224_03210 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:mthd00460] D A3224_13210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13580 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13770 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_10585 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_10605 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_15800 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A3224_06260 hypothetical protein K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D A3224_09500 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D A3224_12650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:mthd00470] D A3224_02330 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A3224_12505 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3224_07650 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D A3224_05220 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A3224_10345 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D A3224_00850 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D A3224_00855 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:mthd00480] D A3224_15800 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A3224_02605 lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D A3224_02600 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D A3224_15700 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D A3224_01010 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D A3224_11205 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A3224_01795 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D A3224_14240 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A3224_10490 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A3224_06725 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D A3224_14210 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A3224_16200 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A3224_15450 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A3224_09260 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D A3224_07985 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D A3224_06715 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D A3224_04785 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3224_02870 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D A3224_11795 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:mthd00511] D A3224_11175 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D A3224_13260 alpha-L-fucosidase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51] C 00540 Lipopolysaccharide biosynthesis [PATH:mthd00540] D A3224_06190 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D A3224_05255 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D A3224_06180 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D A3224_08930 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D A3224_06195 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D A3224_08465 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D A3224_05045 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D A3224_10555 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D A3224_05040 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D A3224_08460 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D A3224_13905 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D A3224_00070 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D A3224_12235 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D A3224_14695 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D A3224_06860 lipid A 3-O-deacylase PagL family protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D A3224_05160 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D A3224_00050 histidinol-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D A3224_13930 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:mthd00541] D A3224_02645 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D A3224_02020 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3224_09335 epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D A3224_08770 UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D A3224_13925 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D A3224_02630 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D A3224_02615 cpsB; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D A3224_02650 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D A3224_16190 glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D A3224_03525 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D A3224_06960 nucleoside-diphosphate sugar epimerase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00550 Peptidoglycan biosynthesis [PATH:mthd00550] D A3224_05060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A3224_08455 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A3224_05235 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A3224_05220 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A3224_05205 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3224_12505 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3224_05210 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A3224_06150 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A3224_06505 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3224_05875 phosphatidic acid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3224_05215 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3224_05230 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A3224_01045 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A3224_02195 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D A3224_04280 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D A3224_05200 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A3224_04300 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A3224_04085 penicillin binding protein PBP4B K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:mthd00552] D A3224_06505 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3224_05875 phosphatidic acid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3224_06960 nucleoside-diphosphate sugar epimerase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:mthd00543] D A3224_01520 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D A3224_04200 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:mthd00730] D A3224_09935 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D A3224_02230 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D A3224_09915 phosphomethylpyrimidine kinase K14153 thiDE; hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3] D A3224_11435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A3224_15300 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D A3224_09930 glycine oxidase ThiO K03153 thiO; glycine oxidase [EC:1.4.3.19] D A3224_12530 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D A3224_09920 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D A3224_12615 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D A3224_01115 ribosome small subunit-dependent GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A3224_15650 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_15655 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_15630 hypothetical protein K07251 thiK; thiamine kinase [EC:2.7.1.89] D A3224_06485 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:mthd00740] D A3224_12600 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D A3224_12630 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D A3224_12640 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D A3224_12625 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D A3224_12635 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D A3224_02710 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D A3224_13860 nudF; ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D A3224_04235 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:mthd00750] D A3224_05965 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D A3224_14505 gapA; type I glyceraldehyde-3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D A3224_09590 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D A3224_06905 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D A3224_02050 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D A3224_06015 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D A3224_06270 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:mthd00760] D A3224_06390 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D A3224_03435 quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D A3224_11025 nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D A3224_07525 hypothetical protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D A3224_07875 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5] D A3224_08180 ADP-ribose pyrophosphatase K13522 K13522; bifunctional NMN adenylyltransferase/nudix hydrolase [EC:2.7.7.1 3.6.1.-] D A3224_04265 nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D A3224_06475 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A3224_09135 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D A3224_02780 NAD+ synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D A3224_10040 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D A3224_00620 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D A3224_08185 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D A3224_13040 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D A3224_08800 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D A3224_08560 NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D A3224_03770 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D A3224_03775 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D A3224_11355 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_14360 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D A3224_10180 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:mthd00770] D A3224_02820 acetolactate synthase 3 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3224_05960 hypothetical protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D A3224_02825 ilvH; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D A3224_02830 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D A3224_13985 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D A3224_04130 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D A3224_01470 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D A3224_02340 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D A3224_15830 phosphopantothenoylcysteine decarboxylase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D A3224_06475 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D A3224_15795 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D A3224_05285 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D A3224_06455 hypothetical protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D A3224_15705 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D A3224_13935 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_03070 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_02980 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] D A3224_01475 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00780 Biotin metabolism [PATH:mthd00780] D A3224_02635 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A3224_07780 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A3224_00410 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_10090 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_07770 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_10975 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_06185 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A3224_01705 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D A3224_10825 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D A3224_01720 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D A3224_01700 biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D A3224_02335 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:mthd00785] D A3224_04310 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D A3224_04315 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_12375 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D A3224_12370 dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D A3224_05410 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D A3224_05415 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D A3224_16185 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4] D A3224_16180 2-oxoisovalerate dehydrogenase K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4] D A3224_16175 hypothetical protein K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168] D A3224_11555 glycine dehydrogenase (aminomethyl-transferring) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D A3224_14100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A3224_14095 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:mthd00790] D A3224_05635 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D A3224_12575 GTP cyclohydrolase FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D A3224_15650 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_15655 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_00760 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3224_13705 twin-arginine translocation pathway signal K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3224_01980 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D A3224_01985 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D A3224_04140 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D A3224_03805 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D A3224_14025 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A3224_05715 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D A3224_12600 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D A3224_12630 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D A3224_07890 para-aminobenzoate synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D A3224_07785 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D A3224_10700 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A3224_07465 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1] D A3224_01990 pteridine reductase K03793 PTR1; pteridine reductase [EC:1.5.1.33] D A3224_03415 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D A3224_03420 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D A3224_09525 preQ(1) synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D A3224_03990 moaA; cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D A3224_04005 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D A3224_04015 molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D A3224_04000 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D A3224_03890 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D A3224_03995 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:mthd00670] D A3224_14025 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D A3224_08855 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D A3224_12650 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D A3224_10745 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D A3224_02125 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A3224_00110 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A3224_14100 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D A3224_07545 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D A3224_14030 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D A3224_11560 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D A3224_14530 methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D A3224_14155 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:mthd00860] D A3224_11720 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3224_04880 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D A3224_02225 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A3224_02210 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D A3224_00990 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D A3224_00985 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D A3224_01095 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D A3224_00145 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D A3224_12680 coproporphyrinogen dehydrogenase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D A3224_02235 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D A3224_06490 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D A3224_00980 hypothetical protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D A3224_08050 sirohydrochlorin ferrochelatase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D A3224_00250 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A3224_00245 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D A3224_07175 cobalamin biosynthesis protein CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D A3224_12730 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D A3224_05580 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:mthd00130] D A3224_03380 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D A3224_15955 chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D A3224_15960 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D A3224_00955 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D A3224_04235 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D A3224_14120 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D A3224_06890 bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D A3224_14125 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D A3224_15580 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D A3224_02115 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D A3224_13090 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D A3224_05790 NAD(P)H-quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D A3224_00690 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:mthd00900] D A3224_12530 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D A3224_06160 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D A3224_10540 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D A3224_04865 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D A3224_10535 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D A3224_11380 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D A3224_02730 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_04235 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D A3224_12525 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D A3224_02655 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D A3224_06150 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00907 Pinene, camphor and geraniol degradation [PATH:mthd00907] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_14895 short chain dehydrogenase K13775 atuG; citronellol/citronellal dehydrogenase D A3224_01660 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D A3224_09210 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D A3224_14510 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis D A3224_02630 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:mthd01053] D A3224_14750 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D A3224_14745 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D A3224_14700 hypothetical protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D A3224_14755 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:mthd00946] D A3224_13210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13580 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13770 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_10585 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_10605 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D A3224_08060 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] C 00332 Carbapenem biosynthesis [PATH:mthd00332] D A3224_02675 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D A3224_04260 gamma-glutamyl-phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:mthd00261] D A3224_14715 hypothetical protein K05375 mbtH; MbtH protein D A3224_05085 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D A3224_09995 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3224_12435 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D A3224_05675 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3224_05680 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D A3224_12230 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D A3224_03615 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:mthd00521] D A3224_13685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D A3224_15835 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D A3224_07295 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D A3224_11450 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D A3224_02630 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D A3224_13685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:mthd00401] D A3224_06915 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase K24018 K24018; cyclohexadieny/prephenate dehydrogenase / 3-phosphoshikimate 1-carboxyvinyltransferase [EC:1.3.1.43 1.3.1.12 2.5.1.19] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A3224_12495 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis D A3224_00665 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D A3224_13185 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D A3224_13675 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D A3224_13775 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D A3224_13780 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] D A3224_10280 tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9] C 00405 Phenazine biosynthesis D A3224_02080 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D A3224_02090 anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D A3224_07765 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A3224_00410 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_10090 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_07770 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_10975 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D A3224_07775 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:mthd00999] D A3224_14520 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D A3224_00155 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D A3224_13210 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13580 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_13770 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_10585 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D A3224_10605 glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:mthd00362] D A3224_09210 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D A3224_11410 2Fe-2S ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D A3224_01560 hypothetical protein K04105 hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25] D A3224_03380 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D A3224_09760 oxaloacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D A3224_07435 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:mthd00627] D A3224_01560 hypothetical protein K04105 hbaA; 4-hydroxybenzoate-CoA ligase [EC:6.2.1.27 6.2.1.25] D A3224_04235 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation [PATH:mthd00364] D A3224_05495 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:mthd00625] D A3224_01785 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D A3224_16125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D A3224_05955 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] D A3224_11005 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:mthd00361] D A3224_05495 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00623 Toluene degradation [PATH:mthd00623] D A3224_05495 dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation D A3224_09210 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation [PATH:mthd00643] D A3224_07130 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D A3224_00700 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2] C 00791 Atrazine degradation [PATH:mthd00791] D A3224_09715 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D A3224_09720 urea carboxylase K01941 uca; urea carboxylase [EC:6.3.4.6] C 00930 Caprolactam degradation [PATH:mthd00930] D A3224_09215 fadB; multifunctional fatty acid oxidation complex subunit alpha K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:mthd00626] D A3224_01785 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D A3224_16125 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:mthd03020] D A3224_02410 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A3224_02415 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A3224_02570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A3224_15900 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:mthd03010] D A3224_06925 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A3224_06130 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A3224_02480 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A3224_02565 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A3224_02535 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A3224_01415 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A3224_02425 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A3224_02520 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A3224_05105 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A3224_02445 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A3224_02560 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A3224_02420 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A3224_02555 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A3224_02515 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A3224_04065 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A3224_06220 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A3224_02495 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A3224_01420 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D A3224_02470 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A3224_02685 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A3224_01970 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D A3224_02395 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A3224_02465 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A3224_02450 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A3224_02455 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A3224_02510 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A3224_02525 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A3224_02405 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A3224_01430 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A3224_02400 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A3224_02390 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A3224_05100 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A3224_02500 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A3224_02545 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A3224_02485 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A3224_02575 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A3224_02530 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A3224_06235 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A3224_06995 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A3224_02660 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A3224_02475 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A3224_02460 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A3224_02505 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D A3224_04850 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D A3224_02665 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A3224_15820 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A3224_02490 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A3224_02540 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A3224_15685 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A3224_07755 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A3224_15815 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D A3224_16365 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D A3224_06990 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A3224_02840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_02280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_09980 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_02295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3224_02855 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3224_09965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3224_02860 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3224_09960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3224_02300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:mthd00970] D A3224_02850 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3224_11715 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3224_02290 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3224_09970 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3224_09495 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3224_09785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3224_00775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3224_08845 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3224_06965 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A3224_08820 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A3224_09435 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A3224_08420 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D A3224_04825 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A3224_04860 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A3224_09555 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A3224_09545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A3224_02360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3224_09550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3224_09540 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3224_08840 tRNA-His K14226 tRNA-His; tRNA His D A3224_02285 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A3224_02845 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A3224_09975 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A3224_01375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_01380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_09205 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_11140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_03825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_08425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_03425 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A3224_03430 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A3224_01940 tRNA-Met K14230 tRNA-Met; tRNA Met D A3224_04035 tRNA-Met K14230 tRNA-Met; tRNA Met D A3224_04830 tRNA-Met K14230 tRNA-Met; tRNA Met D A3224_14990 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A3224_07020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3224_08850 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3224_08410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3224_09505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3224_07725 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3224_09985 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3224_02350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3224_02365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3224_02375 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A3224_02355 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D A3224_08825 tRNA-Val K14237 tRNA-Val; tRNA Val D A3224_06975 tRNA-Val K14237 tRNA-Val; tRNA Val D A3224_09430 tRNA-Val K14237 tRNA-Val; tRNA Val D A3224_11720 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3224_04400 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A3224_04940 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A3224_04935 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A3224_04945 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A3224_08920 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D A3224_10000 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A3224_03355 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A3224_07485 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D A3224_00065 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A3224_00060 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A3224_06980 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A3224_08045 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A3224_08915 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A3224_07565 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D A3224_03210 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A3224_00110 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D A3224_11220 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A3224_04655 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A3224_02715 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A3224_06320 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3224_11545 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A3224_03340 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A3224_11375 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A3224_07000 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A3224_07005 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A3224_02275 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A3224_06520 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:mthd03060] D A3224_02550 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A3224_02380 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A3224_03820 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A3224_11125 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D A3224_11120 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D A3224_07840 preprotein translocase YidC K03210 yajC; preprotein translocase subunit YajC D A3224_16355 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3224_05265 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3224_14905 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A3224_06215 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A3224_10765 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D A3224_15785 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A3224_15555 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D A3224_15550 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D A3224_15545 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D A3224_06430 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D A3224_02720 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:mthd04122] D A3224_11435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A3224_01110 thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3224_07420 rhodanese K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D A3224_09610 preprotein translocase subunit TatC K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D A3224_03445 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D A3224_07685 sulfur relay protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D A3224_07690 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D A3224_07695 tRNA 2-thiouridine(34) synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D A3224_07680 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D A3224_07975 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A3224_04015 molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D A3224_03990 moaA; cyclic pyranopterin phosphate synthase K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D A3224_04010 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D A3224_09910 thiamine biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D A3224_04005 moaC; cyclic pyranopterin monophosphate synthase accessory protein K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D A3224_04000 molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D A3224_15300 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D A3224_09925 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:mthd03018] D A3224_14085 nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D A3224_07730 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D A3224_04915 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D A3224_10550 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3224_04070 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A3224_13795 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D A3224_01385 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D A3224_11585 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A3224_09675 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A3224_00945 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D A3224_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A3224_01890 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_10955 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_01155 RNA chaperone Hfq K03666 hfq; host factor-I protein D A3224_12865 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D A3224_04145 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:mthd03030] D A3224_09150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3224_10620 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3224_12150 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3224_07800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3224_04645 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3224_11210 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A3224_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3224_01435 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A3224_01960 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A3224_02625 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3224_09155 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D A3224_06200 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A3224_00290 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3224_09405 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3224_09690 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:mthd03410] D A3224_06110 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D A3224_06365 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D A3224_14980 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D A3224_15810 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A3224_15505 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A3224_15860 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A3224_08250 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A3224_00290 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3224_06275 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A3224_09405 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3224_09690 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:mthd03420] D A3224_08610 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A3224_02610 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A3224_06970 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D A3224_08440 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A3224_09105 DNA/RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3224_16060 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3224_00290 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3224_09405 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3224_09690 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:mthd03430] D A3224_10365 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D A3224_01145 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D A3224_09105 DNA/RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3224_16060 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3224_11540 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D A3224_05980 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A3224_12520 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A3224_06275 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A3224_02625 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3224_10620 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3224_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3224_12150 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3224_04645 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3224_07800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3224_09150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3224_11210 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A3224_09405 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3224_09690 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:mthd03440] D A3224_06275 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A3224_02625 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3224_00015 recombination protein F K03629 recF; DNA replication and repair protein RecF D A3224_06450 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A3224_12140 recR; recombination protein RecR K06187 recR; recombination protein RecR D A3224_10035 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D A3224_00290 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3224_03370 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D A3224_03375 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A3224_03365 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D A3224_15935 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D A3224_10620 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3224_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3224_12150 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3224_04645 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3224_07800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3224_09150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3224_11210 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A3224_15680 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D A3224_11795 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:mthd03250] D A3224_06020 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:mthd02010] D A3224_08265 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D A3224_08260 molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D A3224_08255 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D A3224_10840 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D A3224_10835 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D A3224_10830 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A3224_05050 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D A3224_04730 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_16025 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_15330 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_12845 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D A3224_16020 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D A3224_15325 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D A3224_16015 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D A3224_15320 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D A3224_16010 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A3224_15315 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A3224_00285 high-affinity zinc uptake system protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D A3224_00275 hypothetical protein K09816 znuB; zinc transport system permease protein D A3224_00280 znuC; Mn2+/Zn2+ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D A3224_08795 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D A3224_08790 ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D A3224_02325 transporter K09696 natB; sodium transport system permease protein D A3224_02320 ABC transporter K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D A3224_08530 lipoprotein-releasing protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein D A3224_08540 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein D A3224_08535 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D A3224_09460 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D A3224_09465 heme ABC transporter permease K02195 ccmC; heme exporter protein C D A3224_09470 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D A3224_09475 heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D A3224_11200 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D A3224_11195 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D A3224_05025 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D A3224_15775 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A3224_15780 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A3224_08470 lipid ABC transporter permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A3224_10465 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB C 02060 Phosphotransferase system (PTS) [PATH:mthd02060] D A3224_14090 phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D A3224_05000 phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr D A3224_05010 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:mthd03070] D A3224_13900 outer membrane channel protein TolC K12340 tolC; outer membrane protein D A3224_08360 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D A3224_08365 hypothetical protein K02452 gspC; general secretion pathway protein C D A3224_08350 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D A3224_08345 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D A3224_08340 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H D A3224_08335 type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D A3224_08325 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D A3224_08320 hypothetical protein K02461 gspL; general secretion pathway protein L D A3224_08315 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D A3224_13960 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D A3224_08355 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D A3224_11125 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D A3224_11120 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D A3224_02380 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A3224_03820 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A3224_02550 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A3224_07840 preprotein translocase YidC K03210 yajC; preprotein translocase subunit YajC D A3224_16355 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3224_05265 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3224_15785 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A3224_14905 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A3224_06215 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A3224_15555 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D A3224_15550 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D A3224_15545 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D A3224_01330 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D A3224_01335 hemolysin-coregulated protein K11903 hcp; type VI secretion system secreted protein Hcp D A3224_01225 hypothetical protein K11906 vasD; type VI secretion system protein VasD D A3224_01240 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D A3224_01235 type IV secretion protein DotU K11892 impK; type VI secretion system protein ImpK D A3224_01290 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D A3224_08710 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D A3224_01220 hypothetical protein K11913 fha1; type VI secretion system protein B B 09132 Signal transduction C 02020 Two-component system [PATH:mthd02020] D A3224_15970 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A3224_15965 DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D A3224_15650 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_15655 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_00760 alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3224_13705 twin-arginine translocation pathway signal K01113 phoD; alkaline phosphatase D [EC:3.1.3.1] D A3224_04730 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_16025 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_15330 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_12845 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D A3224_05855 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D A3224_05850 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D A3224_06075 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D A3224_06420 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D A3224_12485 peptidase S1 K04771 degP; serine protease Do [EC:3.4.21.107] D A3224_16340 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D A3224_16335 DNA-binding response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D A3224_11760 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D A3224_11755 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D A3224_11790 flagellin K02406 fliC; flagellin D A3224_11970 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D A3224_12030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A3224_00245 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D A3224_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A3224_02690 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D A3224_07270 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D A3224_00875 hypothetical protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D A3224_00880 DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D A3224_02320 ABC transporter K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D A3224_02325 transporter K09696 natB; sodium transport system permease protein D A3224_03915 hypothetical protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D A3224_03895 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D A3224_03920 narZ; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D A3224_03925 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D A3224_03935 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D A3224_03930 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D A3224_06460 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D A3224_08300 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D A3224_08445 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D A3224_09990 carbon storage regulator K03563 csrA; carbon storage regulator D A3224_05600 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D A3224_15270 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A3224_15255 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A3224_15265 hypothetical protein K07346 fimC; fimbrial chaperone protein D A3224_15260 hypothetical protein K07347 fimD; outer membrane usher protein D A3224_06120 glnD; bifunctional uridylyltransferase/uridylyl-removing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D A3224_15280 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D A3224_15275 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D A3224_15295 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_06790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_07855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_04150 Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_02775 sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D A3224_02770 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D A3224_05020 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D A3224_05305 pilus assembly protein K02650 pilA; type IV pilus assembly protein PilA D A3224_12005 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D A3224_11995 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D A3224_12015 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D A3224_12020 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D A3224_11990 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D A3224_12000 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D A3224_01030 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D A3224_01025 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D A3224_01035 histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D A3224_01015 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D A3224_01020 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D A3224_01040 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC D A3224_02105 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3224_02940 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3224_05110 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D A3224_05115 ubiquinol-cytochrome C reductase K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A3224_11090 cytochrome C oxidase Cbb3 K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D A3224_11085 cytochrome C oxidase Cbb3 K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D A3224_11080 cytochrome C oxidase Cbb3 K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D A3224_11075 cytochrome C oxidase Cbb3 K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D A3224_03510 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D A3224_03505 cytochrome BD ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D A3224_13900 outer membrane channel protein TolC K12340 tolC; outer membrane protein D A3224_03525 UDP-N-acetyl glucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D A3224_01875 hypothetical protein K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D A3224_13240 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_13315 glycosyl hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_13335 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_06300 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_10595 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_13225 glycoside hydrolase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4] D A3224_13325 cellobiohydrolase K19668 CBH2; cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91] D A3224_00675 hypothetical protein K07165 fecR; transmembrane sensor D A3224_12160 iron acquisition-like protein K07165 fecR; transmembrane sensor D A3224_09485 hypothetical protein K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D A3224_11945 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis D A3224_05110 ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:mthd02024] D A3224_01155 RNA chaperone Hfq K03666 hfq; host factor-I protein D A3224_02080 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D A3224_02090 anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D A3224_07145 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A3224_07630 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D A3224_11760 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D A3224_11755 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D A3224_04325 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15] D A3224_01880 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D A3224_01885 pectate lyase K01728 pel; pectate lyase [EC:4.2.2.2] D A3224_11335 hypothetical protein K20276 bapA; large repetitive protein D A3224_03880 hypothetical protein K20276 bapA; large repetitive protein D A3224_09365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A3224_02105 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3224_02940 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3224_08160 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D A3224_13320 hypothetical protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78] D A3224_12600 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D A3224_12640 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D A3224_06645 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D A3224_07600 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D A3224_16355 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3224_15885 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-] D A3224_02380 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A3224_03820 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A3224_02550 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A3224_07840 preprotein translocase YidC K03210 yajC; preprotein translocase subunit YajC D A3224_05265 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3224_15785 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A3224_14905 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A3224_06215 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:mthd02030] D A3224_11995 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D A3224_12020 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D A3224_12015 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D A3224_11990 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D A3224_11985 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D A3224_12000 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D A3224_12005 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D A3224_11825 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D A3224_11855 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D A3224_11860 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D A3224_12030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A3224_12025 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:mthd02040] D A3224_11815 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D A3224_11820 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D A3224_11825 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D A3224_11830 hypothetical protein K02411 fliH; flagellar assembly protein FliH D A3224_11835 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D A3224_11840 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D A3224_11845 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D A3224_11850 hypothetical protein K02415 fliL; flagellar protein FliL D A3224_11855 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D A3224_11860 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D A3224_11865 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D A3224_11870 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D A3224_11875 EscS/YscS/HrcS family type III secretion system export apparatus protein K02420 fliQ; flagellar biosynthesis protein FliQ D A3224_11880 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D A3224_11975 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D A3224_11980 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D A3224_11940 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D A3224_11935 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D A3224_11930 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D A3224_11925 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D A3224_11920 flgE; flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D A3224_11915 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D A3224_11910 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D A3224_11905 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D A3224_11900 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D A3224_11895 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D A3224_11890 flagellar hook protein K02396 flgK; flagellar hook-associated protein 1 D A3224_11885 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D A3224_11790 flagellin K02406 fliC; flagellin D A3224_11785 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2 D A3224_11780 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D A3224_11775 hypothetical protein K02423 fliT; flagellar protein FliT D A3224_12030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A3224_12025 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D A3224_11945 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D A3224_11950 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D A3224_01955 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D A3224_11760 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D A3224_11755 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D A3224_05020 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D A3224_11970 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D A3224_10550 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D A3224_07545 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:mthd01501] D A3224_10990 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D A3224_08635 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D A3224_04080 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D A3224_05600 serine hydrolase K01467 ampC; beta-lactamase class C [EC:3.5.2.6] D A3224_02805 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_14740 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_08235 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_02810 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D A3224_14735 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D A3224_08230 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D A3224_10655 RND transporter K18138 acrB; multidrug efflux pump D A3224_06645 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D A3224_07600 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D A3224_13900 outer membrane channel protein TolC K12340 tolC; outer membrane protein D A3224_01045 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A3224_04280 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D A3224_05200 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:mthd01502] D A3224_12505 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3224_02330 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A3224_05210 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D A3224_05215 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3224_05230 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:mthd01503] D A3224_05855 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D A3224_05850 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D A3224_06075 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D A3224_01140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A3224_06420 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D A3224_12485 peptidase S1 K04771 degP; serine protease Do [EC:3.4.21.107] D A3224_00350 disulfide bond formation protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D A3224_06020 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D A3224_02805 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_14740 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_08235 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_02810 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D A3224_14735 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D A3224_08230 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D A3224_10655 RND transporter K18138 acrB; multidrug efflux pump D A3224_13900 outer membrane channel protein TolC K12340 tolC; outer membrane protein D A3224_06190 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:mthd01000] C 01001 Protein kinases [BR:mthd01001] D A3224_08710 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D A3224_12470 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D A3224_15970 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A3224_05855 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D A3224_16340 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D A3224_02690 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D A3224_03915 hypothetical protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D A3224_06460 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D A3224_08300 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D A3224_00875 hypothetical protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D A3224_01740 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D A3224_15280 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D A3224_02775 sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D A3224_12020 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D A3224_01035 histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) C 01009 Protein phosphatases and associated proteins [BR:mthd01009] D A3224_14525 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A3224_05605 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D A3224_01205 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D A3224_08705 serine/threonine protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D A3224_01625 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:mthd01002] D A3224_02720 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D A3224_05290 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D A3224_05990 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D A3224_05730 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D A3224_01085 gltB; glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D A3224_04740 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3224_16165 glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D A3224_12380 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70] D A3224_14055 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB D A3224_14045 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB D A3224_00260 hypothetical protein K07052 K07052; CAAX protease family protein D A3224_02035 hypothetical protein K07052 K07052; CAAX protease family protein D A3224_09040 hypothetical protein K07052 K07052; CAAX protease family protein D A3224_01620 aminopeptidase K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6] D A3224_14240 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A3224_10490 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D A3224_10760 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D A3224_00185 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D A3224_07150 peptidase M3 K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D A3224_12580 dipeptidyl carboxypeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D A3224_02930 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D A3224_07380 peptidase M16 K06972 PITRM1; presequence protease [EC:3.4.24.-] D A3224_14460 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-] D A3224_11205 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D A3224_01795 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D A3224_06095 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D A3224_06725 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D A3224_06125 type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D A3224_11565 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D A3224_14130 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D A3224_02895 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D A3224_02920 peptidase M28 K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-] D A3224_09780 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A3224_03800 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A3224_04185 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D A3224_03440 peptidase M48 K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D A3224_06165 zinc metallopeptidase RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D A3224_12500 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D A3224_09865 hypothetical protein K09933 mtfA; MtfA peptidase D A3224_06420 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D A3224_12485 peptidase S1 K04771 degP; serine protease Do [EC:3.4.21.107] D A3224_05080 2-alkenal reductase K04691 hhoB; serine protease DegS [EC:3.4.21.-] D A3224_15885 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-] D A3224_04320 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D A3224_07585 hypothetical protein K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D A3224_03480 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D A3224_04300 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A3224_04085 penicillin binding protein PBP4B K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D A3224_09195 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D A3224_09185 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D A3224_08655 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D A3224_06430 S26 family signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89] D A3224_14935 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D A3224_08245 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D A3224_08060 penicillin amidase K01434 pac; penicillin G amidase [EC:3.5.1.11] D A3224_05780 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D A3224_09125 protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D A3224_14115 hypothetical protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D A3224_10330 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D A3224_15670 HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D A3224_09500 isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D A3224_15800 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D A3224_03905 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D A3224_03955 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D A3224_03950 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D A3224_00605 TldD protein K03568 tldD; TldD protein D A3224_00615 TldD protein K03568 tldD; TldD protein D A3224_00355 hypothetical protein K08276 eco; ecotin D A3224_01170 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D A3224_01165 protease modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:mthd01003] D A3224_11795 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D A3224_05310 hypothetical protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-] D A3224_02195 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D A3224_01045 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A3224_08110 hypothetical protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] D A3224_06800 glycosyl transferase K26815 manT; MMP alpha-(1->4)-mannosyltransferase [EC:2.4.1.393] D A3224_05765 glycosyl transferase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:mthd01005] D A3224_06190 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D A3224_06195 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D A3224_05255 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D A3224_06180 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D A3224_08930 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D A3224_08465 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D A3224_00070 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D A3224_12235 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D A3224_14695 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-] D A3224_13905 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D A3224_06860 lipid A 3-O-deacylase PagL family protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-] D A3224_10555 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D A3224_08460 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D A3224_05040 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D A3224_05045 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D A3224_13930 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26] D A3224_05160 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D A3224_00050 histidinol-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D A3224_15480 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:mthd01011] D A3224_05060 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D A3224_08455 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D A3224_05235 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D A3224_05220 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D A3224_05205 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D A3224_12505 D-alanine--D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D A3224_02330 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D A3224_07650 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D A3224_10330 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D A3224_05215 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D A3224_05230 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D A3224_06505 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3224_05875 phosphatidic acid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D A3224_02705 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D A3224_01045 peptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D A3224_02195 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D A3224_04280 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D A3224_05200 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A3224_04300 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D A3224_04085 penicillin binding protein PBP4B K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D A3224_14055 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB D A3224_14045 peptidoglycan-binding protein K21470 ycbB; L,D-transpeptidase YcbB D A3224_12500 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D A3224_12380 class GN sortase K07284 srtA; sortase A [EC:3.4.22.70] D A3224_08690 lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D A3224_01190 lytic transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D A3224_04290 lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D A3224_09170 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D A3224_05450 lytic transglycosylase F K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D A3224_14305 hypothetical protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D A3224_05975 hypothetical protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D A3224_07790 BCR, YceG family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D A3224_04295 sugar fermentation stimulation protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D A3224_01140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A3224_11015 N-acetyl-anhydromuranmyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:mthd01004] D A3224_07765 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D A3224_09225 beta-ketoacyl synthase K18473 fabY; acetoacetyl-[acyl-carrier protein] synthase [EC:2.3.1.180] D A3224_02635 beta-ketoacyl-ACP synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D A3224_07780 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D A3224_00410 oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_10090 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_07770 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_10975 fabG; 3-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D A3224_02640 beta-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D A3224_06185 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D A3224_12250 trans-2-enoyl-CoA reductase K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44] D A3224_10810 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D A3224_08405 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D A3224_16040 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D A3224_11465 stearoyl-CoA 9-desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] D A3224_01480 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_04345 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D A3224_09885 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D A3224_09365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A3224_04930 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D A3224_07760 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] C 01008 Polyketide biosynthesis proteins [BR:mthd01008] D A3224_14715 hypothetical protein K05375 mbtH; MbtH protein D A3224_14750 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D A3224_14700 hypothetical protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D A3224_14755 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D A3224_14710 hypothetical protein K24101 vabF; L-arginine---[L-arginyl-carrier protein] ligase [EC:6.2.1.63] C 01006 Prenyltransferases [BR:mthd01006] D A3224_12525 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D A3224_02655 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D A3224_06150 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D A3224_01150 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A3224_15960 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D A3224_00250 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:mthd01007] D A3224_11720 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3224_08920 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D A3224_04160 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D A3224_02275 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A3224_06520 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A3224_08915 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A3224_11545 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A3224_03210 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A3224_02715 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A3224_11220 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A3224_04655 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A3224_06320 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3224_03355 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A3224_07485 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D A3224_11375 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A3224_00065 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A3224_00060 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A3224_08045 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A3224_03340 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A3224_06980 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A3224_10000 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A3224_07000 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A3224_07005 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A3224_07565 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D A3224_07140 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D A3224_09570 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D A3224_03285 aspartate aminotransferase K12252 aruH; arginine:pyruvate transaminase [EC:2.6.1.84] D A3224_06115 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D A3224_04405 aspartate aminotransferase K10907 K10907; aminotransferase [EC:2.6.1.-] D A3224_12495 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D A3224_05945 glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D A3224_01705 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D A3224_09680 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A3224_14355 omega amino acid--pyruvate aminotransferase K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18] D A3224_05570 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D A3224_12445 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76] D A3224_06785 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113] D A3224_10825 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D A3224_02225 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D A3224_13935 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_03070 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D A3224_06905 3-phosphoserine/phosphohydroxythreonine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:mthd00194] D A3224_16210 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D A3224_16215 F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D A3224_16220 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D A3224_16225 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D A3224_16230 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D A3224_16235 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D A3224_16240 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D A3224_16245 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A3224_16250 ATP F0F1 synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:mthd03000] D A3224_01930 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3224_11575 XRE family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D A3224_15930 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D A3224_00170 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D A3224_07880 cysB; transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D A3224_09890 LysR family transcriptional regulator K17737 dhcR; LysR family transcriptional regulator, carnitine catabolism transcriptional activator D A3224_14365 LysR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon D A3224_13180 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3224_04775 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3224_05525 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D A3224_13365 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D A3224_13610 hypothetical protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D A3224_14780 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D A3224_01805 GntR family transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D A3224_10155 GntR family transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D A3224_14345 hypothetical protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D A3224_08240 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D A3224_15845 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D A3224_08400 TetR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D A3224_16275 TetR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D A3224_03735 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D A3224_03100 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D A3224_07230 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3224_10785 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3224_03290 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3224_07180 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3224_06830 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D A3224_07460 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D A3224_12270 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D A3224_03685 helix-turn-helix transcriptional regulator K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation D A3224_13110 transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D A3224_12895 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D A3224_14680 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D A3224_06305 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D A3224_03760 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D A3224_03585 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D A3224_08160 Fur family transcriptional regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D A3224_02105 transcriptional regulator Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3224_02940 cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D A3224_12675 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D A3224_11440 Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D A3224_04630 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D A3224_11695 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D A3224_08270 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D A3224_15875 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D A3224_16065 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D A3224_02335 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D A3224_02130 methyltransferase K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D A3224_07525 hypothetical protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D A3224_07225 bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D A3224_09705 transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D A3224_16255 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A3224_07470 hypothetical protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D A3224_14380 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D A3224_01000 hypothetical protein K07735 algH; putative transcriptional regulator D A3224_04165 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D A3224_12645 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D A3224_05185 cell division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:mthd03021] D A3224_02570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A3224_02410 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A3224_02415 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A3224_15900 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A3224_01955 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D A3224_10510 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D A3224_06395 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3224_14540 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3224_07115 RNA polymerase subunit sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D A3224_15770 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor D A3224_05020 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D A3224_11970 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D A3224_04045 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D A3224_12620 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D A3224_02385 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D A3224_05120 stringent starvation protein A K03599 sspA; stringent starvation protein A D A3224_05125 stringent starvation protein B K03600 sspB; stringent starvation protein B D A3224_12075 response regulator receiver protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D A3224_06400 anti-sigma factor K03597 rseA; sigma-E factor negative regulatory protein RseA D A3224_06405 hypothetical protein K03598 rseB; sigma-E factor negative regulatory protein RseB D A3224_06410 positive regulator for alginate biosynthesis MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D A3224_04165 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D A3224_03640 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D A3224_07300 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D A3224_00945 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:mthd03019] D A3224_07730 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D A3224_04970 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D A3224_06440 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A3224_01385 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D A3224_01120 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D A3224_04915 RNA helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D A3224_13795 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D A3224_11585 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A3224_09675 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A3224_10550 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3224_04070 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D A3224_00945 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D A3224_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A3224_01890 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_10955 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_01155 RNA chaperone Hfq K03666 hfq; host factor-I protein D A3224_12865 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D A3224_04145 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D A3224_14085 nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D A3224_09990 carbon storage regulator K03563 csrA; carbon storage regulator D A3224_07910 ribonuclease activity regulator protein RraA K02553 rraA; regulator of ribonuclease activity A D A3224_05005 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ D A3224_12100 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D A3224_07570 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:mthd03011] D A3224_06925 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D A3224_06130 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D A3224_02480 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D A3224_02565 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D A3224_02535 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D A3224_01415 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D A3224_02425 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D A3224_02520 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D A3224_05105 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D A3224_02445 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D A3224_02560 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D A3224_02420 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D A3224_02555 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D A3224_02515 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D A3224_04065 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D A3224_06220 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D A3224_02495 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D A3224_01420 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D A3224_02470 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D A3224_02685 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D A3224_01970 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D A3224_02395 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D A3224_02465 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D A3224_02450 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D A3224_02455 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D A3224_02510 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D A3224_02525 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D A3224_01430 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D A3224_02400 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D A3224_02390 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D A3224_02405 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D A3224_05100 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D A3224_02500 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D A3224_02545 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D A3224_02485 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D A3224_02575 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D A3224_02530 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D A3224_06235 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D A3224_06995 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D A3224_02660 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D A3224_02475 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D A3224_02460 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D A3224_02505 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D A3224_02665 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D A3224_15820 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D A3224_02490 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D A3224_02540 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D A3224_15685 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D A3224_07755 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D A3224_15815 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D A3224_16365 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D A3224_06990 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D A3224_04850 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D A3224_02860 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3224_09960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3224_02300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3224_02840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_02280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_09980 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_02295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3224_02855 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3224_09965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:mthd03009] D A3224_06440 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A3224_01120 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D A3224_06445 GTPase Era K03595 era; GTPase D A3224_02670 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D A3224_04165 RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor D A3224_04045 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D A3224_12620 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB D A3224_02385 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D A3224_08860 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D A3224_02045 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D A3224_00105 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D A3224_08865 rRNA methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D A3224_15790 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D A3224_14570 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D A3224_10775 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D A3224_16265 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A3224_05190 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D A3224_05175 rRNA (cytidine-2'-O-)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D A3224_07360 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D A3224_10690 hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D A3224_11165 23S rRNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D A3224_01390 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D A3224_06005 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D A3224_03795 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D A3224_04275 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D A3224_00035 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D A3224_09580 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D A3224_08715 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))-methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D A3224_11395 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D A3224_13080 23S rRNA (uracil(1939)-C(5))-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D A3224_14670 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D A3224_06060 23S rRNA pseudouridylate synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D A3224_07735 23S rRNA pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D A3224_02790 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D A3224_07980 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D A3224_02885 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D A3224_03620 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D A3224_14390 alpha-L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D A3224_06225 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D A3224_00040 rimO; ribosomal protein S12 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D A3224_00745 protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D A3224_02145 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D A3224_05640 ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D A3224_07960 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D A3224_07730 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D A3224_04970 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D A3224_00995 crossover junction endodeoxyribonuclease RuvA K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D A3224_11585 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D A3224_01115 ribosome small subunit-dependent GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D A3224_11360 ribosome biogenesis GTPase Der K03977 engA; GTPase D A3224_01160 GTPase HflX K03665 hflX; GTPase D A3224_00140 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A3224_15905 (p)ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D A3224_04055 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D A3224_04040 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D A3224_04270 ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein D A3224_04690 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D A3224_03790 RNA-binding protein K07574 yhbY; RNA-binding protein D A3224_04990 hypothetical protein K09889 yjgA; ribosome-associated protein D A3224_08720 ribosome modulation factor K03812 rmf; ribosome modulation factor D A3224_05015 hypothetical protein K05808 hpf; ribosome hibernation promoting factor D A3224_04840 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D A3224_07750 nucleic acid-binding protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:mthd03016] D A3224_01995 cca; multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D A3224_11720 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3224_03340 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D A3224_02715 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D A3224_04655 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A3224_03210 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D A3224_08920 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D A3224_11545 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A3224_06320 lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D A3224_03355 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A3224_10000 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D A3224_07485 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D A3224_06980 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D A3224_08045 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D A3224_08915 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D A3224_11220 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D A3224_11375 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D A3224_07000 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D A3224_07005 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D A3224_02275 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A3224_06520 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D A3224_15515 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D A3224_10005 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A3224_09285 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A3224_15760 tRNA (guanine-N7)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D A3224_11350 tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D A3224_05690 tRNA pseudouridine(38,39,40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D A3224_04060 tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D A3224_10530 tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D A3224_11435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A3224_00140 tRNA threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D A3224_01150 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D A3224_16350 tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D A3224_16270 gidA; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A3224_15190 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D A3224_16360 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D A3224_05180 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D A3224_11105 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D A3224_15865 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D A3224_06730 RNAse R K01147 rnb; exoribonuclease II [EC:3.1.13.1] D A3224_12135 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D A3224_09245 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D A3224_12700 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D A3224_00065 glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D A3224_00060 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D A3224_07565 hypothetical protein K01884 cysS1; cysteinyl-tRNA synthetase, unknown class [EC:6.1.1.16] D A3224_04160 glutamyl-Q tRNA(Asp) ligase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D A3224_02440 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D A3224_11160 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D A3224_12055 tRNA dihydrouridine synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D A3224_02135 tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D A3224_09775 tRNA dihydrouridine synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D A3224_04700 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D A3224_07375 tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D A3224_07370 tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D A3224_07395 smtA protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-] D A3224_07670 tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D A3224_06230 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D A3224_15520 hypothetical protein K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D A3224_11445 RNA methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D A3224_09645 tRNA (cytosine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D A3224_07030 pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D A3224_14670 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D A3224_07975 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D A3224_10805 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D A3224_09610 preprotein translocase subunit TatC K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D A3224_03445 SirA-like domain-containing protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D A3224_07685 sulfur relay protein DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B D A3224_07690 sulfur relay protein TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D A3224_07695 tRNA 2-thiouridine(34) synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D A3224_07680 sulfur relay protein TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D A3224_11425 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D A3224_06375 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ D A3224_08950 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D A3224_12260 tRNA hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D A3224_09655 amino acid oxidase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D A3224_11135 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D A3224_03420 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D A3224_03415 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D A3224_09525 preQ(1) synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D A3224_01125 epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D A3224_11130 tgt; tRNA-guanine(34) transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D A3224_15300 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D A3224_10565 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D A3224_06500 tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D A3224_01975 N(6)-L-threonylcarbamoyladenine synthase TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D A3224_01135 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D A3224_09305 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D A3224_01385 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D A3224_04070 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:mthd03012] D A3224_07315 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1 D A3224_04050 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A3224_06985 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A3224_15745 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D A3224_06135 elongation factor Ts K02357 tsf; elongation factor Ts D A3224_02370 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A3224_02435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A3224_02430 fusA; elongation factor G K02355 fusA; elongation factor G D A3224_04885 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D A3224_06145 ribosome recycling factor K02838 frr; ribosome recycling factor D A3224_04890 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D A3224_04845 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D A3224_08005 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D A3224_01535 elongation factor P K02356 efp; elongation factor P D A3224_01530 poxB regulator PoxA K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D A3224_01610 EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D A3224_09600 diaminobutyrate--2-oxoglutarate aminotransferase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D A3224_06315 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D A3224_02900 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D A3224_04375 class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:mthd03110] D A3224_08000 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D A3224_02800 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D A3224_09190 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D A3224_15665 hslU; HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D A3224_05605 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D A3224_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A3224_11415 hscA; molecular chaperone HscA K04044 hscA; molecular chaperone HscA D A3224_01890 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_10955 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_03610 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D A3224_00645 cytochrome C biogenesis protein K05516 cbpA; curved DNA-binding protein D A3224_09710 molecular chaperone DjlA K05801 djlA; DnaJ like chaperone protein D A3224_11420 Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D A3224_15225 molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33 D A3224_03600 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D A3224_12400 hypothetical protein K13993 HSP20; HSP20 family protein D A3224_12670 hypothetical protein K13993 HSP20; HSP20 family protein D A3224_09240 heat-shock protein IbpA K04080 ibpA; molecular chaperone IbpA D A3224_15210 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D A3224_01895 co-chaperone GroES K04078 groES; chaperonin GroES D A3224_10960 co-chaperone GroES K04078 groES; chaperonin GroES D A3224_06420 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107] D A3224_12485 peptidase S1 K04771 degP; serine protease Do [EC:3.4.21.107] D A3224_09780 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A3224_03800 hflB; ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D A3224_16245 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D A3224_15265 hypothetical protein K07346 fimC; fimbrial chaperone protein D A3224_14905 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A3224_06080 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D A3224_02175 hypothetical protein K09796 pccA; periplasmic copper chaperone A D A3224_15885 peptidase S8 K14645 K14645; serine protease [EC:3.4.21.-] D A3224_11175 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52] D A3224_06020 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D A3224_08925 cyclophilin K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D A3224_09175 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D A3224_15730 hypothetical protein K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D A3224_02725 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D A3224_09295 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D A3224_03940 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D A3224_02055 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D A3224_00940 thiol reductase thioredoxin K03671 TXN; thioredoxin D A3224_10675 co-chaperone YbbN K05838 ybbN; putative thioredoxin D A3224_14910 glutaredoxin K03676 grxC; glutaredoxin 3 D A3224_05575 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D A3224_00350 disulfide bond formation protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D A3224_15710 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D A3224_06245 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D A3224_09445 thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D A3224_16345 ABC transporter ATP-binding protein K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:mthd04131] D A3224_11400 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D A3224_10020 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_08605 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_04800 gapA; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_08205 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_04805 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A3224_05605 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:mthd03051] D A3224_05605 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:mthd03032] D A3224_09155 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D A3224_01930 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3224_09180 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A3224_07010 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D A3224_06930 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D A3224_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A3224_01435 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D A3224_01960 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D A3224_02625 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3224_10620 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3224_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3224_11210 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A3224_04645 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3224_07800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3224_09150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3224_12150 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3224_06200 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D A3224_00290 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3224_09405 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3224_09690 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3224_10730 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein D A3224_06900 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A3224_00020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A3224_12900 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A3224_08670 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:mthd03036] D A3224_11795 hypothetical protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D A3224_01930 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3224_06440 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D A3224_10020 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_09180 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A3224_07010 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D A3224_06930 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D A3224_00645 cytochrome C biogenesis protein K05516 cbpA; curved DNA-binding protein D A3224_00650 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM D A3224_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein D A3224_09895 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D A3224_02130 methyltransferase K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D A3224_01155 RNA chaperone Hfq K03666 hfq; host factor-I protein D A3224_00170 LysR family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D A3224_07230 leucine-responsive transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3224_10785 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3224_03290 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3224_07180 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D A3224_09415 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D A3224_06050 rifampin ADP-ribosyl transferase K05896 scpA; segregation and condensation protein A D A3224_05245 cell division protein FtsA K03590 ftsA; cell division protein FtsA D A3224_10545 cell division protein FtsB K05589 ftsB; cell division protein FtsB D A3224_15780 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A3224_05200 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D A3224_08025 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D A3224_05195 nicotinate-nucleotide pyrophosphorylase K03586 ftsL; cell division protein FtsL D A3224_15675 carbamoyl-phosphate synthase small subunit K03591 ftsN; cell division protein FtsN D A3224_05240 cell division protein K03589 ftsQ; cell division protein FtsQ D A3224_05225 cell division protein FtsW K03588 ftsW; cell division protein FtsW D A3224_15775 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A3224_05250 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A3224_09410 hypothetical protein K03528 zipA; cell division protein ZipA D A3224_14145 cell division protein ZapA K09888 zapA; cell division protein ZapA D A3224_14140 TIGR02449 family protein K09892 zapB; cell division protein ZapB D A3224_05095 ATPase K06916 zapE; cell division protein ZapE D A3224_01140 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D A3224_02805 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_14740 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_08235 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_15845 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D A3224_04950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D A3224_04955 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D A3224_04960 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D A3224_04285 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D A3224_16260 chromosome partitioning protein K03496 parA; chromosome partitioning protein D A3224_16255 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D A3224_12900 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A3224_16270 gidA; tRNA uridine(34) 5-carboxymethylaminomethyl synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D A3224_16265 16S rRNA methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D A3224_00840 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D A3224_06240 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D A3224_03215 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D A3224_16140 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D A3224_00340 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:mthd03400] D A3224_10635 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D A3224_03275 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D A3224_06365 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D A3224_14980 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D A3224_06110 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D A3224_08290 hypothetical protein K05986 NUCS; nuclease S1 [EC:3.1.30.1] D A3224_05275 7,8-dihydro-8-oxoguanine-triphosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A3224_08190 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A3224_04600 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D A3224_15505 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D A3224_15810 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D A3224_15860 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A3224_08250 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D A3224_11690 endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D A3224_06275 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D A3224_09405 ligA; DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3224_09690 hypothetical protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D A3224_00290 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D A3224_02610 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D A3224_06970 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D A3224_08440 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D A3224_09105 DNA/RNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3224_16060 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D A3224_02410 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D A3224_02415 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D A3224_02570 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D A3224_15900 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D A3224_08610 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D A3224_10365 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D A3224_01145 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D A3224_11540 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D A3224_05980 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D A3224_12520 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D A3224_10620 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D A3224_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D A3224_11210 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D A3224_04645 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D A3224_07800 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D A3224_09150 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D A3224_12150 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D A3224_02625 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3224_10035 DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D A3224_03370 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D A3224_03375 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D A3224_03365 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D A3224_15680 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D A3224_12755 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D A3224_00015 recombination protein F K03629 recF; DNA replication and repair protein RecF D A3224_15935 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D A3224_06450 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D A3224_12140 recR; recombination protein RecR K06187 recR; recombination protein RecR D A3224_03595 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D A3224_06720 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D A3224_07640 DNA helicase UvrD K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D A3224_07645 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D A3224_14580 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D A3224_03170 subtype I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D A3224_13480 ATP-dependent helicase K19789 radD; DNA repair protein RadD D A3224_06900 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D A3224_00020 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D A3224_08670 DNA topoisomerase I subunit omega K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D A3224_09180 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D A3224_02130 methyltransferase K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D A3224_07010 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D A3224_06930 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D A3224_09675 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D A3224_10380 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D A3224_08655 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88] D A3224_05355 SOS cell division inhibitor SulA K14160 imuA; protein ImuA D A3224_05350 DNA repair protein K14161 imuB; protein ImuB D A3224_10030 RecX family transcriptional regulator K03565 recX; regulatory protein D A3224_00785 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D A3224_11490 ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D A3224_00325 ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3224_05560 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D A3224_05555 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:mthd03029] D A3224_05115 ubiquinol-cytochrome C reductase K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D A3224_04050 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D A3224_06985 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D A3224_06135 elongation factor Ts K02357 tsf; elongation factor Ts D A3224_02370 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A3224_02435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A3224_02430 fusA; elongation factor G K02355 fusA; elongation factor G D A3224_11305 MBL fold metallo-hydrolase K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-] D A3224_06445 GTPase Era K03595 era; GTPase D A3224_02275 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D A3224_04655 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D A3224_03355 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D A3224_11545 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D A3224_04400 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A3224_04940 aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D A3224_04935 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D A3224_04945 asparaginyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D A3224_02625 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D A3224_06170 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D A3224_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A3224_03600 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D A3224_01890 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_10955 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_01895 co-chaperone GroES K04078 groES; chaperonin GroES D A3224_10960 co-chaperone GroES K04078 groES; chaperonin GroES D A3224_03610 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D A3224_11435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D A3224_11420 Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB D A3224_05575 monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin D A3224_03215 ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D A3224_00250 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D A3224_00220 cytochrome C oxidase assembly protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D A3224_00245 cytochrome B K02259 COX15; heme a synthase [EC:1.17.99.9] D A3224_16355 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3224_00235 hypothetical protein K14998 SURF1; surfeit locus 1 family protein D A3224_00255 electron transporter SenC K07152 SCO1; protein SCO1 D A3224_05605 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:mthd02000] D A3224_08470 lipid ABC transporter permease/ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D A3224_10465 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D A3224_08685 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D A3224_08265 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D A3224_08260 molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D A3224_08255 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D A3224_10840 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D A3224_10835 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D A3224_10830 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D A3224_09745 lipid kinase K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D A3224_09740 lipid kinase K02050 ABC.SN.P; NitT/TauT family transport system permease protein D A3224_09735 lauroyl acyltransferase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D A3224_12925 ABC transporter permease K02069 STAR2; UDP-glucose/iron transport system permease protein D A3224_12920 ABC transporter K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D A3224_05050 toluene tolerance protein K07323 mlaC; phospholipid transport system substrate-binding protein D A3224_10110 ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D A3224_04730 hypothetical protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_16025 phosphate ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_15330 ABC transporter substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D A3224_12845 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D A3224_16020 phosphate ABC transporter permease K02037 pstC; phosphate transport system permease protein D A3224_15325 phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D A3224_16015 phosphate ABC transporter permease K02038 pstA; phosphate transport system permease protein D A3224_15320 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D A3224_16010 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A3224_15315 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D A3224_12750 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D A3224_12745 hypothetical protein K02015 ABC.FEV.P; iron complex transport system permease protein D A3224_12740 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D A3224_00285 high-affinity zinc uptake system protein ZnuA K09815 znuA; zinc transport system substrate-binding protein D A3224_00275 hypothetical protein K09816 znuB; zinc transport system permease protein D A3224_00280 znuC; Mn2+/Zn2+ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D A3224_08795 hypothetical protein K09690 wzm; homopolymeric O-antigen transport system permease protein D A3224_08790 ABC transporter K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D A3224_11200 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D A3224_11195 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D A3224_05025 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D A3224_02325 transporter K09696 natB; sodium transport system permease protein D A3224_02320 ABC transporter K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4] D A3224_04535 ABC transporter permease K25151 gldF; gliding motility-associated transport system permease protein D A3224_04530 multidrug ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein D A3224_08530 lipoprotein-releasing protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein D A3224_08540 cell division protein FtsX K09808 lolC_E; lipoprotein-releasing system permease protein D A3224_08535 lipoprotein ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D A3224_09460 heme exporter protein CcmD K02196 ccmD; heme exporter protein D D A3224_09465 heme ABC transporter permease K02195 ccmC; heme exporter protein C D A3224_09470 heme exporter protein CcmB K02194 ccmB; heme exporter protein B D A3224_09475 heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D A3224_15775 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D A3224_15780 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D A3224_09530 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D A3224_03740 sugar ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D A3224_03700 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D A3224_09535 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3224_03745 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3224_03695 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D A3224_00075 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D A3224_00080 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D A3224_01570 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D A3224_01575 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D A3224_12300 ABC transporter ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein D A3224_12305 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D A3224_12540 peptide ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D A3224_10820 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D A3224_00085 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A3224_01580 ABC transporter K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A3224_12295 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A3224_12545 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A3224_10815 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D A3224_04905 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D A3224_02890 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D A3224_10095 MFS transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter D A3224_13605 MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D A3224_10570 MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D A3224_10610 MFS transporter K08139 HXT; MFS transporter, SP family, sugar:H+ symporter D A3224_05520 galactoside permease K02532 lacY; MFS transporter, OHS family, lactose permease D A3224_04750 MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D A3224_09020 MFS transporter K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter D A3224_00415 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D A3224_10235 glucarate transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D A3224_00730 hypothetical protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D A3224_03900 antiporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D A3224_03980 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D A3224_10990 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D A3224_13710 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D A3224_16070 Bcr/CflA subfamily drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D A3224_14340 hypothetical protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D A3224_15425 MFS sugar transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D A3224_15395 MFS transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A3224_12885 EmrB/QacA family drug resistance transporter K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D A3224_14090 phosphoenolpyruvate--protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D A3224_05000 phosphocarrier protein HPr K08485 ptsO; phosphocarrier protein NPr D A3224_05010 PTS fructose transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D A3224_07320 ion transporter K10716 kch; voltage-gated potassium channel D A3224_02085 ion transporter K08714 VGSC; voltage-gated sodium channel D A3224_00825 ammonium transporter K03320 amt; ammonium transporter, Amt family D A3224_14210 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A3224_16200 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A3224_15450 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D A3224_05120 stringent starvation protein A K03599 sspA; stringent starvation protein A D A3224_08750 BatB protein K07114 yfbK; Ca-activated chloride channel homolog D A3224_08755 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog D A3224_12385 alpha-1-antitrypsin K07114 yfbK; Ca-activated chloride channel homolog D A3224_07700 BAX inhibitor protein K19416 yccA; modulator of FtsH protease D A3224_01765 mechanosensitive ion channel protein MscS K05802 mscK; potassium-dependent mechanosensitive channel D A3224_08630 mechanosensitive ion channel protein MscS K16052 ynaI; MscS family membrane protein D A3224_04995 magnesium transporter K06213 mgtE; magnesium transporter D A3224_12030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A3224_12025 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D A3224_14010 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D A3224_14015 energy transducer TonB K03561 exbB; biopolymer transport protein ExbB D A3224_08480 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D A3224_03860 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D A3224_15090 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB D A3224_02970 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D A3224_08475 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D A3224_14005 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D A3224_03385 protein TolQ K03562 tolQ; biopolymer transport protein TolQ D A3224_03390 protein TolR K03560 tolR; biopolymer transport protein TolR D A3224_12410 magnesium transporter CorA K03284 corA; magnesium transporter D A3224_08040 camphor resistance protein CrcB K06199 crcB; fluoride exporter D A3224_11520 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D A3224_14110 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3224_06205 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3224_06840 porin K07221 oprO_P; phosphate-selective porin OprO and OprP D A3224_15750 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D A3224_06000 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D A3224_14190 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family D A3224_07245 hypothetical protein K06076 fadL; long-chain fatty acid transport protein D A3224_10755 long-chain fatty acid outer membrane transporter K06076 fadL; long-chain fatty acid transport protein D A3224_15260 hypothetical protein K07347 fimD; outer membrane usher protein D A3224_03280 hypothetical protein K12686 apeE; outer membrane lipase/esterase D A3224_02200 TonB-dependent receptor K16090 fiu; catecholate siderophore receptor D A3224_12735 hypothetical protein K16092 btuB; vitamin B12 transporter D A3224_03490 hypothetical protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D A3224_14765 hypothetical protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D A3224_07160 outer-membrane heme receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein D A3224_00765 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_00270 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_00400 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_00435 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_01815 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_00670 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_00685 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_04550 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_04810 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_11295 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_13680 ligand-gated channel protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_10210 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_14875 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_14970 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_07865 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_12185 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_10580 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_10600 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_15175 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_08065 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_12555 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_04030 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_15645 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_12165 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_12170 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_12180 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_12195 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_14330 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_10265 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_10285 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D A3224_13900 outer membrane channel protein TolC K12340 tolC; outer membrane protein D A3224_10470 type I secretion protein TolC K12543 lapE; outer membrane protein, adhesin transport system D A3224_06645 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D A3224_07600 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D A3224_06170 outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D A3224_11365 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D A3224_12225 lipoprotein-34 K07287 bamC; outer membrane protein assembly factor BamC D A3224_02785 competence protein ComL K05807 bamD; outer membrane protein assembly factor BamD D A3224_03580 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE D A3224_09875 hypothetical protein K07278 tamA; translocation and assembly module TamA D A3224_09870 hypothetical protein K09800 tamB; translocation and assembly module TamB D A3224_05030 lipopolysaccharide transporter K09774 lptA; lipopolysaccharide export system protein LptA D A3224_05035 LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D A3224_02060 hypothetical protein K04744 lptD; LPS-assembly protein D A3224_04650 hypothetical protein K03643 lptE; LPS-assembly lipoprotein D A3224_04685 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein D A3224_04760 hypothetical protein K06518 cidA; holin-like protein D A3224_15715 hypothetical protein K06518 cidA; holin-like protein D A3224_13620 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter D A3224_04895 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D A3224_08125 hypothetical protein K16267 zipB; zinc and cadmium transporter D A3224_02810 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D A3224_14735 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D A3224_08230 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D A3224_10655 RND transporter K18138 acrB; multidrug efflux pump D A3224_12335 multidrug efflux RND transporter permease subunit K19585 oqxB; multidrug efflux pump D A3224_06530 multidrug transporter K03297 emrE; small multidrug resistance pump D A3224_01775 molecular chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE D A3224_14430 chloramphenical resistance permease RarD K05786 rarD; chloramphenicol-sensitive protein RarD D A3224_04370 choline transporter K02168 betT; choline/glycine/proline betaine transport protein D A3224_00655 calcium:proton antiporter K07301 yrbG; cation:H+ antiporter D A3224_12430 sodium:proline symporter K11928 putP; sodium/proline symporter D A3224_10800 sodium:proline symporter K11928 putP; sodium/proline symporter D A3224_04360 cation acetate symporter K14393 actP; cation/acetate symporter D A3224_09145 nhaB; Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D A3224_11500 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family D A3224_16095 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D A3224_05930 sodium:proton antiporter K03316 nhaP; Na+:H+ antiporter D A3224_16100 potassium transporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D A3224_08990 sodium:proton exchanger K03455 KEA1_2_3; K+:H+ antiporter D A3224_12850 sodium:proton antiporter K26735 KEA4_5_6; K+:H+ antiporter D A3224_00095 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein D A3224_00100 trkA; potassium transporter peripheral membrane component K03499 trkA; trk/ktr system potassium uptake protein D A3224_14220 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D A3224_02220 hypothetical protein K05782 benE; benzoate membrane transport protein D A3224_02240 chloride transporter ClC family protein K03281 clcA; chloride channel protein, CIC family D A3224_09070 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D A3224_09100 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D A3224_12285 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D A3224_12760 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family D A3224_13135 transporter K03321 TC.SULP; sulfate permease, SulP family D A3224_08280 arsenical-resistance protein K03325 ACR3; arsenite transporter D A3224_02705 lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D A3224_07660 transporter K13936 mdcF; malonate transporter and related proteins D A3224_00165 lysine transporter LysE K06895 lysE; L-lysine exporter family protein LysE/ArgO D A3224_06285 threonine transporter RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein D A3224_07095 hypothetical protein K05835 rhtC; threonine efflux protein D A3224_03450 AI-2E family transporter K03548 perM; putative permease D A3224_15485 hypothetical protein K22736 VIT; vacuolar iron transporter family protein D A3224_05225 cell division protein FtsW K03588 ftsW; cell division protein FtsW D A3224_02865 iron permease K07243 FTR; high-affinity iron transporter D A3224_01005 energy transducer TonB K03832 tonB; periplasmic protein TonB D A3224_13990 hypothetical protein K03832 tonB; periplasmic protein TonB D A3224_14000 energy transducer TonB K03832 tonB; periplasmic protein TonB D A3224_11960 hypothetical protein K03832 tonB; periplasmic protein TonB D A3224_02935 energy transducer TonB K03832 tonB; periplasmic protein TonB D A3224_03405 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D A3224_02950 hypothetical protein K03646 tolA; colicin import membrane protein D A3224_03395 protein TolA K03646 tolA; colicin import membrane protein D A3224_13345 hypothetical protein K03641 tolB; TolB protein D A3224_03400 translocation protein TolB K03641 tolB; TolB protein D A3224_09760 oxaloacetate decarboxylase subunit beta K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1] D A3224_09765 oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2] D A3224_09770 sodium pump decarboxylase subunit gamma K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma D A3224_03920 narZ; nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D A3224_03925 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D A3224_03935 nitrate reductase K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D A3224_15400 efflux transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system D A3224_12890 multidrug transporter K03543 emrA; membrane fusion protein, multidrug efflux system D A3224_10460 secretion protein HlyD K12542 lapC; membrane fusion protein, adhesin transport system D A3224_03730 efflux transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D A3224_02805 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_14740 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_08235 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_12330 efflux transporter periplasmic adaptor subunit K19586 oqxA; membrane fusion protein, multidrug efflux system D A3224_15635 nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter D A3224_07520 hypothetical protein K03811 pnuC; nicotinamide mononucleotide transporter D A3224_09450 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:mthd02044] D A3224_13900 outer membrane channel protein TolC K12340 tolC; outer membrane protein D A3224_10465 ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D A3224_10460 secretion protein HlyD K12542 lapC; membrane fusion protein, adhesin transport system D A3224_10470 type I secretion protein TolC K12543 lapE; outer membrane protein, adhesin transport system D A3224_08365 hypothetical protein K02452 gspC; general secretion pathway protein C D A3224_08360 type II secretion system protein GspD K02453 gspD; general secretion pathway protein D D A3224_13960 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D A3224_08355 type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D A3224_08350 type II secretion system protein GspF K02455 gspF; general secretion pathway protein F D A3224_08345 type II secretion system protein GspG K02456 gspG; general secretion pathway protein G D A3224_08340 general secretion pathway protein GspH K02457 gspH; general secretion pathway protein H D A3224_08335 type II secretion system protein GspI K02458 gspI; general secretion pathway protein I D A3224_08325 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K D A3224_08320 hypothetical protein K02461 gspL; general secretion pathway protein L D A3224_08315 general secretion pathway protein GspM K02462 gspM; general secretion pathway protein M D A3224_05290 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D A3224_05305 pilus assembly protein K02650 pilA; type IV pilus assembly protein PilA D A3224_05300 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D A3224_05295 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D A3224_02760 general secretion pathway protein GspH K02655 pilE; type IV pilus assembly protein PilE D A3224_11390 pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF D A3224_01015 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D A3224_01020 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D A3224_01025 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D A3224_01030 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D A3224_01050 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D A3224_01055 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D A3224_01060 pilus assembly protein PilP K02664 pilO; type IV pilus assembly protein PilO D A3224_01065 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D A3224_01070 fimbrial protein K02666 pilQ; type IV pilus assembly protein PilQ D A3224_00890 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D A3224_00885 type IV pili twitching motility protein PilT K02670 pilU; twitching motility protein PilU D A3224_02740 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D A3224_02745 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D A3224_02750 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D A3224_02755 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D A3224_07805 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D A3224_09140 hypothetical protein K27041 fimL; scaffold protein FimL D A3224_02735 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D A3224_02765 hypothetical protein K08084 fimT; type IV fimbrial biogenesis protein FimT D A3224_05685 hypothetical protein K08086 fimV; pilus assembly protein FimV D A3224_00905 hypothetical protein K02221 yggT; YggT family protein D A3224_12175 DNA-binding protein K02237 comEA; competence protein ComEA D A3224_08485 hypothetical protein K02238 comEC; competence protein ComEC D A3224_11975 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D A3224_11980 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D A3224_11765 flagellar protein FhlB K04061 flhB2; flagellar biosynthesis protein D A3224_11820 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D A3224_11830 hypothetical protein K02411 fliH; flagellar assembly protein FliH D A3224_11835 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D A3224_11860 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D A3224_11865 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D A3224_11870 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D A3224_11875 EscS/YscS/HrcS family type III secretion system export apparatus protein K02420 fliQ; flagellar biosynthesis protein FliQ D A3224_11880 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D A3224_06245 protein-disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D A3224_03280 hypothetical protein K12686 apeE; outer membrane lipase/esterase D A3224_01240 type VI secretion protein IcmF K11891 impL; type VI secretion system protein ImpL D A3224_01235 type IV secretion protein DotU K11892 impK; type VI secretion system protein ImpK D A3224_01230 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ D A3224_01285 hypothetical protein K11895 impH; type VI secretion system protein ImpH D A3224_01280 type VI secretion protein K11896 impG; type VI secretion system protein ImpG D A3224_01275 type VI secretion system lysozyme-related protein K11897 impF; type VI secretion system protein ImpF D A3224_01215 hypothetical protein K11900 impC; type VI secretion system protein ImpC D A3224_01265 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D A3224_01260 type VI secretion protein K11901 impB; type VI secretion system protein ImpB D A3224_01255 type VI secretion-associated protein, ImpA family K11902 impA; type VI secretion system protein ImpA D A3224_01335 hemolysin-coregulated protein K11903 hcp; type VI secretion system secreted protein Hcp D A3224_01330 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG D A3224_01225 hypothetical protein K11906 vasD; type VI secretion system protein VasD D A3224_01290 ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D A3224_01245 hypothetical protein K11890 impM; type VI secretion system protein ImpM D A3224_01270 type VI secretion protein K11899 impD; type VI secretion system protein ImpD D A3224_08710 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1] D A3224_01220 hypothetical protein K11913 fha1; type VI secretion system protein D A3224_15265 hypothetical protein K07346 fimC; fimbrial chaperone protein D A3224_15260 hypothetical protein K07347 fimD; outer membrane usher protein D A3224_15270 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A3224_15255 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A3224_11730 hypothetical protein K21966 ecpC; Mat/Ecp fimbriae outer membrane usher protein D A3224_11745 hypothetical protein K21968 ecpE; Mat/Ecp fimbriae periplasmic chaperone D A3224_03665 hypothetical protein K04335 csgB; minor curlin subunit D A3224_03650 hypothetical protein K04335 csgB; minor curlin subunit D A3224_03680 curli assembly protein CsgE K04337 csgE; curli production assembly/transport component CsgE D A3224_03675 curli production assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF D A3224_03670 curli production assembly/transport protein CsgG K06214 csgG; curli production assembly/transport component CsgG D A3224_05265 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D A3224_14905 preprotein translocase subunit SecB K03071 secB; preprotein translocase subunit SecB D A3224_11125 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D A3224_02380 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D A3224_11120 preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D A3224_03820 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D A3224_02550 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D A3224_06215 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D A3224_15785 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D A3224_07840 preprotein translocase YidC K03210 yajC; preprotein translocase subunit YajC D A3224_16355 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D A3224_15555 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D A3224_15550 twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D A3224_15545 twin-arginine protein translocation system subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:mthd02042] D A3224_14110 hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3224_06205 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D A3224_01185 hemolysin III K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:mthd02022] D A3224_15970 PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D A3224_15965 DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D A3224_05855 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D A3224_05850 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D A3224_06075 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D A3224_16340 hypothetical protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D A3224_16335 DNA-binding response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D A3224_02690 histidine kinase K14980 chvG; two-component system, OmpR family, sensor histidine kinase ChvG [EC:2.7.13.3] D A3224_02695 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator D A3224_03915 hypothetical protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D A3224_03895 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D A3224_06460 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D A3224_08300 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D A3224_08445 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D A3224_00875 hypothetical protein K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D A3224_00880 DNA-binding response regulator K08083 algR; two-component system, LytTR family, response regulator AlgR D A3224_01740 hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D A3224_01745 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator D A3224_15280 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D A3224_15275 glnG; nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D A3224_04150 Fis family transcriptional regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D A3224_02775 sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D A3224_02770 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D A3224_12020 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D A3224_11990 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D A3224_12000 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D A3224_01035 histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D A3224_01015 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D A3224_01020 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH C 02035 Bacterial motility proteins [BR:mthd02035] D A3224_12020 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D A3224_12015 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D A3224_12005 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D A3224_12000 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D A3224_11990 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D A3224_11985 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D A3224_11995 chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D A3224_11830 hypothetical protein K02411 fliH; flagellar assembly protein FliH D A3224_11835 flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D A3224_11840 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ D A3224_11865 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D A3224_11870 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D A3224_11875 EscS/YscS/HrcS family type III secretion system export apparatus protein K02420 fliQ; flagellar biosynthesis protein FliQ D A3224_11880 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR D A3224_11975 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D A3224_11980 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D A3224_11825 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D A3224_11855 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D A3224_11860 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D A3224_11820 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D A3224_11900 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI D A3224_11940 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D A3224_11905 flgH; flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH D A3224_11850 hypothetical protein K02415 fliL; flagellar protein FliL D A3224_11815 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D A3224_11845 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D A3224_11935 flagellar biosynthesis protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D A3224_11930 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D A3224_11925 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD D A3224_11915 flgF; flagellar biosynthesis protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D A3224_11910 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D A3224_11895 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D A3224_11920 flgE; flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE D A3224_11890 flagellar hook protein K02396 flgK; flagellar hook-associated protein 1 D A3224_11885 flagellar biosynthesis protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D A3224_11950 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN D A3224_11790 flagellin K02406 fliC; flagellin D A3224_11785 flagellar hook protein K02407 fliD; flagellar hook-associated protein 2 D A3224_11780 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D A3224_11775 hypothetical protein K02423 fliT; flagellar protein FliT D A3224_11760 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D A3224_11755 transcriptional activator FlhC K02402 flhC; flagellar transcriptional activator FlhC D A3224_11970 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D A3224_12030 flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D A3224_12025 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB D A3224_11945 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D A3224_11810 hypothetical protein K06603 flaG; flagellar protein FlaG D A3224_01015 pilus assembly protein PilG K02657 pilG; twitching motility two-component system response regulator PilG D A3224_01020 two-component system response regulator K02658 pilH; twitching motility two-component system response regulator PilH D A3224_01025 chemotaxis protein CheW K02659 pilI; twitching motility protein PilI D A3224_01030 chemotaxis protein K02660 pilJ; twitching motility protein PilJ D A3224_01035 histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D A3224_02770 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR D A3224_02775 sensor protein PilS K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D A3224_00890 twitching motility protein PilT K02669 pilT; twitching motility protein PilT D A3224_00885 type IV pili twitching motility protein PilT K02670 pilU; twitching motility protein PilU D A3224_01040 hypothetical protein K06598 chpC; chemosensory pili system protein ChpC D A3224_05305 pilus assembly protein K02650 pilA; type IV pilus assembly protein PilA D A3224_05300 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB D A3224_05295 type II secretion system protein F K02653 pilC; type IV pilus assembly protein PilC D A3224_05290 methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D A3224_11390 pilus assembly protein PilW K02656 pilF; type IV pilus assembly protein PilF D A3224_01070 fimbrial protein K02666 pilQ; type IV pilus assembly protein PilQ D A3224_01065 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP D A3224_01060 pilus assembly protein PilP K02664 pilO; type IV pilus assembly protein PilO D A3224_01055 pilus assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN D A3224_01050 pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D A3224_07805 pilus assembly protein PilZ K02676 pilZ; type IV pilus assembly protein PilZ D A3224_02740 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D A3224_02745 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW D A3224_02750 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D A3224_02755 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1 D A3224_02760 general secretion pathway protein GspH K02655 pilE; type IV pilus assembly protein PilE D A3224_15265 hypothetical protein K07346 fimC; fimbrial chaperone protein D A3224_15260 hypothetical protein K07347 fimD; outer membrane usher protein D A3224_15270 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D A3224_15255 hypothetical protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:mthd04812] D A3224_04950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D A3224_05250 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A3224_05245 cell division protein FtsA K03590 ftsA; cell division protein FtsA D A3224_16260 chromosome partitioning protein K03496 parA; chromosome partitioning protein D A3224_16255 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:mthd04147] D A3224_05605 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D A3224_10020 fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D A3224_10550 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D A3224_08605 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_04800 gapA; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_08205 type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D A3224_14445 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D A3224_04805 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D A3224_06020 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D A3224_05595 alkyl hydroperoxide reductase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D A3224_01890 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_10955 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D A3224_03605 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D A3224_11515 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_05515 hypothetical protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D A3224_03480 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D A3224_05985 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D A3224_02370 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A3224_02435 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D A3224_10005 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A3224_09285 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D A3224_09365 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D A3224_05150 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D A3224_10760 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] D A3224_14525 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D A3224_06485 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D A3224_00870 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D A3224_11095 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D A3224_10025 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D A3224_15295 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_06790 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_07855 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D A3224_02210 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D A3224_00690 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] D A3224_10700 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D A3224_15650 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_15655 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_14425 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D A3224_02125 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D A3224_05420 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D A3224_08370 electron transfer flavoprotein subunit beta K03522 fixB; electron transfer flavoprotein alpha subunit D A3224_04785 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D A3224_03815 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:mthd02048] D A3224_14580 hypothetical protein K15342 cas1; CRISP-associated protein Cas1 D A3224_03170 subtype I-E CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1 D A3224_14575 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D A3224_14590 hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 D A3224_03175 type I-E CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 D A3224_03140 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D A3224_03145 type I-E CRISPR-associated protein Cse1/CasA K19123 casA; CRISPR system Cascade subunit CasA D A3224_03150 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB D A3224_03155 type I-E CRISPR-associated protein Cas7/Cse4/CasC K19124 casC; CRISPR system Cascade subunit CasC D A3224_03160 type I-E CRISPR-associated protein Cas5/CasD K19125 casD; CRISPR system Cascade subunit CasD D A3224_03165 type I-E CRISPR-associated protein Cas6/Cse3/CasE K19126 casE; CRISPR system Cascade subunit CasE D A3224_14635 hypothetical protein K07016 csm1; CRISPR-associated protein Csm1 D A3224_14630 hypothetical protein K19138 csm2; CRISPR-associated protein Csm2 D A3224_14625 hypothetical protein K09002 csm3; CRISPR-associated protein Csm3 D A3224_14620 hypothetical protein K19139 csm4; CRISPR-associated protein Csm4 D A3224_14615 hypothetical protein K19140 csm5; CRISPR-associated protein Csm5 D A3224_01930 cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A3224_16135 restriction endonuclease subunit R K01156 res; type III restriction enzyme [EC:3.1.21.5] D A3224_16145 DNA methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D A3224_05250 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A3224_04950 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D A3224_12900 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A3224_11720 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D A3224_06385 hypothetical protein K19168 cptA; toxin CptA D A3224_06380 response regulator receiver protein K09159 cptB; antitoxin CptB D A3224_11435 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides [BR:mthd04052] D A3224_00620 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] D A3224_08185 nicotinate phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12] C 04515 Cell adhesion molecules C 04090 CD molecules [BR:mthd04090] D A3224_03480 peptidase S9 K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5] D A3224_10760 peptidyl-dipeptidase K01283 ACE; peptidyl-dipeptidase A [EC:3.4.15.1] C 01504 Antimicrobial resistance genes [BR:mthd01504] D A3224_09900 lyase K18235 vgb; virginiamycin B lyase [EC:4.2.99.-] D A3224_05855 histidine kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D A3224_05850 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D A3224_02805 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_14740 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_08235 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D A3224_02810 acriflavine resistance protein B K18138 acrB; multidrug efflux pump D A3224_14735 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D A3224_08230 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D A3224_10655 RND transporter K18138 acrB; multidrug efflux pump D A3224_06645 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D A3224_07600 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system D A3224_03735 TetR family transcriptional regulator K18301 mexL; TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor D A3224_03730 efflux transporter periplasmic adaptor subunit K18302 mexJ; membrane fusion protein, multidrug efflux system D A3224_06305 hypothetical protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D A3224_13900 outer membrane channel protein TolC K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:mthd00537] D A3224_15650 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D A3224_15655 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:mthd03100] D A3224_02850 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3224_11715 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3224_02290 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3224_09970 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D A3224_09495 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3224_09785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3224_00775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3224_08845 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D A3224_06965 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D A3224_08820 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A3224_09435 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D A3224_08420 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D A3224_04825 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A3224_04860 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D A3224_09555 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A3224_09545 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D A3224_02360 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3224_09550 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3224_09540 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D A3224_08840 tRNA-His K14226 tRNA-His; tRNA His D A3224_02285 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A3224_02845 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A3224_09975 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D A3224_01375 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_01380 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_09205 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_11140 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_03825 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_08425 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D A3224_03425 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A3224_03430 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D A3224_01940 tRNA-Met K14230 tRNA-Met; tRNA Met D A3224_04035 tRNA-Met K14230 tRNA-Met; tRNA Met D A3224_04830 tRNA-Met K14230 tRNA-Met; tRNA Met D A3224_14990 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D A3224_07020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3224_08850 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3224_08410 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D A3224_09505 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3224_07725 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3224_09985 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D A3224_02350 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3224_02365 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D A3224_02375 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D A3224_02355 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D A3224_08825 tRNA-Val K14237 tRNA-Val; tRNA Val D A3224_06975 tRNA-Val K14237 tRNA-Val; tRNA Val D A3224_09430 tRNA-Val K14237 tRNA-Val; tRNA Val D A3224_02840 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_02280 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_09980 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D A3224_02295 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3224_02855 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3224_09965 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D A3224_02860 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3224_09960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3224_02300 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D A3224_10765 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D A3224_05180 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D A3224_03550 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D A3224_01830 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D A3224_15410 dkgB; 2,5-didehydrogluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D A3224_12040 NAD-binding protein K21054 eryB; D-erythritol 1-phosphate dehydrogenase [EC:1.1.1.402] D A3224_13355 GMC family oxidoreductase K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11] D A3224_15495 glucose sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D A3224_09330 short-chain dehydrogenase K11166 DHRS7B; dehydrogenase/reductase SDR family member 7B [EC:1.1.-.-] D A3224_06835 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D A3224_07185 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D A3224_10435 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D A3224_01550 hypothetical protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D A3224_01455 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D A3224_08380 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D A3224_00515 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A3224_10400 NADPH:quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A3224_05970 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A3224_15415 hypothetical protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D A3224_08225 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D A3224_09060 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D A3224_04215 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D A3224_07415 peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D A3224_04980 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D A3224_09565 peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D A3224_03180 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D A3224_16075 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D A3224_07830 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A3224_15250 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D A3224_09055 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D A3224_14685 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D A3224_16090 nuclease PIN K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D A3224_02205 PKHD-type hydroxylase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-] D A3224_00450 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D A3224_05795 arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D A3224_08275 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D A3224_03960 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D A3224_10525 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D A3224_10970 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D A3224_06815 hypothetical protein K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365] D A3224_07940 hypothetical protein K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D A3224_01690 beta-ketoacyl-ACP synthase III K16872 E2.3.1.207; beta-ketodecanoyl-[acyl-carrier-protein] synthase [EC:2.3.1.207] D A3224_04680 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D A3224_00030 hypothetical protein K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D A3224_09665 glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D A3224_08015 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D A3224_05750 transglutaminase K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D A3224_08010 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D A3224_13630 glycosyl hydrolase K18820 agd31B; oligosaccharide 4-alpha-D-glucosyltransferase [EC:2.4.1.161] D A3224_00740 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D A3224_05550 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D A3224_14035 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D A3224_15060 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D A3224_08570 thiamin biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D A3224_07895 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D A3224_13940 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D A3224_12855 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D A3224_10115 carnitine dehydratase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D A3224_10120 acyl-CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D A3224_13235 9-O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53] D A3224_10795 RNase III inhibitor K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D A3224_15460 phosphatase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D A3224_14720 hypothetical protein K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D A3224_10480 PnbA K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D A3224_14900 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D A3224_06040 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D A3224_09000 phosphoglycerate mutase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D A3224_05620 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D A3224_09315 deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D A3224_07810 hydrolase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D A3224_13695 glucan 1,3-beta-glucanase K01180 E3.2.1.6; endo-1,3(4)-beta-glucanase [EC:3.2.1.6] D A3224_13515 agarase K01219 E3.2.1.81; beta-agarase [EC:3.2.1.81] D A3224_10290 hypothetical protein K01219 E3.2.1.81; beta-agarase [EC:3.2.1.81] D A3224_13625 alpha-amlyase K21575 susA; neopullulanase [EC:3.2.1.135] D A3224_13205 alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139] D A3224_13305 xyloglucanase K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155] D A3224_01820 DNA-directed RNA polymerase subunit alpha K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D A3224_13275 alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D A3224_11300 glycoside hydrolase K21606 endo_I; endo-chitodextinase [EC:3.2.1.202] D A3224_06810 prenyltransferase K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221] D A3224_10245 agarase K27195 E3.2.1.222; funoran endo-beta-hydrolase [EC:3.2.1.222] D A3224_00115 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D A3224_07745 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D A3224_00595 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D A3224_08735 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D A3224_05740 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D A3224_15145 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D A3224_01800 galactonate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D A3224_01130 bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D A3224_00425 alginate lyase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26] D A3224_10450 hypothetical protein K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D A3224_04230 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D A3224_01590 hypothetical protein K27292 avaA6; 3-aminoavenalumate diazotase [EC:6.7.1.2] D A3224_03115 electron transport complex subunit RsxD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D A3224_03120 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D A3224_03125 electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D A3224_08600 NADH:ubiquinone reductase (Na(+)-transporting) subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D A3224_08595 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D A3224_08590 NADH:ubiquinone reductase (Na(+)-transporting) subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D A3224_08585 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D A3224_08580 NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D A3224_08575 NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] C 99981 Carbohydrate metabolism D A3224_04170 sugar fermentation stimulation protein SfsA K06206 sfsA; sugar fermentation stimulation protein A D A3224_13055 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB D A3224_13360 hypothetical protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit C 99982 Energy metabolism D A3224_10370 ferredoxin K05524 fdxA; ferredoxin D A3224_03110 electron transporter RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D A3224_03105 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D A3224_03130 electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D A3224_09650 flavodoxin K03840 fldB; flavodoxin II D A3224_11430 iron-sulfur cluster scaffold-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins D A3224_06085 flavodoxin FldA K03839 fldA; flavodoxin I D A3224_08375 electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D A3224_04640 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D A3224_04920 sulfate uptake protein K06203 cysZ; CysZ protein D A3224_01870 hypothetical protein K08234 yaeR; glyoxylase I family protein D A3224_03765 lactoylglutathione lyase K08234 yaeR; glyoxylase I family protein D A3224_06415 murein peptide amidase A K14054 mpaA; murein peptide amidase A D A3224_00895 YggS family pyridoxal phosphate enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D A3224_06935 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D A3224_06940 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B D A3224_11150 hypothetical protein K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism D A3224_00975 metal-dependent phosphohydrolase K02498 hemY; HemY protein D A3224_15570 ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D A3224_15575 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D A3224_00810 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D A3224_03945 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D A3224_06525 aminobenzoyl-glutamate transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism C 99999 Others D A3224_16080 DoxX family protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D A3224_08625 cold shock domain protein CspD K03704 cspA; cold shock protein D A3224_07990 cold-shock protein K03704 cspA; cold shock protein D A3224_15725 transcriptional regulator K07740 rsd; regulator of sigma D D A3224_00820 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D A3224_00830 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D A3224_14655 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D A3224_07995 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D A3224_09200 trigger factor K03545 tig; trigger factor D A3224_03560 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein D A3224_00805 ATP-dependent protease K07391 comM; magnesium chelatase family protein D A3224_02110 osmotically inducible protein OsmC K07397 yhfA; putative redox protein D A3224_07555 Fe-S biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D A3224_04240 selT/selW/selH selenoprotein domain-containing protein K07401 K07401; selenoprotein W-related protein D A3224_11530 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D A3224_10985 cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D A3224_15825 hypothetical protein K03630 radC; DNA repair protein RadC D A3224_07655 recombinase RmuC K09760 rmuC; DNA recombination protein RmuC D A3224_05165 hypothetical protein K07460 yraN; putative endonuclease D A3224_05915 hypothetical protein K07461 K07461; putative endonuclease D A3224_00125 DNA processing protein DprA K04096 smf; DNA processing protein D A3224_08035 recombination factor protein RarA K07478 ycaJ; putative ATPase D A3224_06555 hypothetical protein K07481 K07481; transposase, IS5 family D A3224_01305 hypothetical protein K07482 K07482; transposase, IS30 family D A3224_11710 transposase K07482 K07482; transposase, IS30 family D A3224_11660 transposase K07493 K07493; putative transposase D A3224_07610 transposase K07493 K07493; putative transposase D A3224_13445 transposase K07493 K07493; putative transposase D A3224_13490 transposase K07493 K07493; putative transposase D A3224_13750 transposase K07493 K07493; putative transposase D A3224_09790 transposase K07493 K07493; putative transposase D A3224_14815 transposase K07493 K07493; putative transposase D A3224_00545 transposase K07497 K07497; putative transposase D A3224_00550 transposase K07497 K07497; putative transposase D A3224_13410 transposase K07497 K07497; putative transposase D A3224_13565 transposase K07497 K07497; putative transposase D A3224_13570 transposase K07497 K07497; putative transposase D A3224_14825 transposase K07497 K07497; putative transposase D A3224_14830 transposase K07497 K07497; putative transposase D A3224_05335 transposase K07497 K07497; putative transposase D A3224_05340 transposase K07497 K07497; putative transposase D A3224_09795 transposase K07497 K07497; putative transposase D A3224_09800 transposase K07497 K07497; putative transposase D A3224_11680 transposase K07497 K07497; putative transposase D A3224_11685 transposase K07497 K07497; putative transposase D A3224_14495 transposase K07497 K07497; putative transposase D A3224_14500 transposase K07497 K07497; putative transposase D A3224_04475 transposase K07497 K07497; putative transposase D A3224_04480 transposase K07497 K07497; putative transposase D A3224_13405 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D A3224_00630 hypothetical protein K03969 pspA; phage shock protein A D A3224_12145 nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D A3224_12205 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D A3224_13970 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D A3224_13690 sodium transporter K03307 TC.SSS; solute:Na+ symporter, SSS family D A3224_04110 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D A3224_03555 transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D A3224_03565 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D A3224_13175 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D A3224_07850 alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D A3224_09340 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family C 99978 Cell growth D A3224_04620 iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling D A3224_02595 hypothetical protein K06350 kipA; antagonist of KipI D A3224_02005 SpoVR family protein K06415 spoVR; stage V sporulation protein R D A3224_14925 ATPase K22719 envC; murein hydrolase activator C 99993 Cell motility D A3224_04190 competence protein TfoX K07343 tfoX; DNA transformation protein and related proteins C 99995 Signaling proteins D A3224_11010 transcriptional regulator K03807 ampE; AmpE protein D A3224_08680 universal stress protein UspA K06149 uspA; universal stress protein A D A3224_03975 hypothetical protein K14055 uspE; universal stress protein E D A3224_13660 universal stress protein K14055 uspE; universal stress protein E D A3224_10725 hypothetical protein K14055 uspE; universal stress protein E D A3224_15435 GTP-binding protein TypA K06207 typA; GTP-binding protein D A3224_04695 ATP-binding protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D A3224_02015 PrkA family serine protein kinase K07180 prkA; serine protein kinase D A3224_06025 peptide-binding protein K07184 ygiM; SH3 domain protein D A3224_06350 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein C 99992 Structural proteins D A3224_08030 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D A3224_04870 outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D A3224_12080 VacJ lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D A3224_06175 hypothetical protein K06142 hlpA; outer membrane protein D A3224_10515 peptidase M23 K06194 nlpD; lipoprotein NlpD D A3224_11590 hypothetical protein K07265 kpsS; capsular polysaccharide export protein D A3224_06795 hypothetical protein K07275 ompW; outer membrane protein D A3224_09695 hypothetical protein K07275 ompW; outer membrane protein D A3224_09700 hypothetical protein K07275 ompW; outer membrane protein D A3224_03540 hypothetical protein K07275 ompW; outer membrane protein D A3224_12685 hypothetical protein K07275 ompW; outer membrane protein D A3224_02180 hypothetical protein K07286 yajG; uncharacterized lipoprotein D A3224_14975 AsmA protein K07289 asmA; AsmA protein D A3224_15590 hypothetical protein K07340 ybbJ; inner membrane protein D A3224_03690 hemolysin secretion protein D K01993 ABC-2.TX; HlyD family secretion protein D A3224_00090 efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D A3224_12290 efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein D A3224_05375 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB D A3224_09455 cytochrome c biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D A3224_09420 c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH D A3224_09425 cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D A3224_11385 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D A3224_16005 transcriptional regulator PhoU K02039 phoU; phosphate transport system protein D A3224_05590 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin D A3224_00865 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D A3224_14075 imelysin K07231 K07231; putative iron-regulated protein D A3224_12790 copper resistance protein CopB K07233 pcoB; copper resistance protein B D A3224_04625 short-chain dehydrogenase K07234 K07234; uncharacterized protein involved in response to NO B B 09194 Poorly characterized C 99996 General function prediction only D A3224_05725 colicin V production CvpA K03558 cvpA; membrane protein required for colicin V production D A3224_09115 patatin K07001 K07001; NTE family protein D A3224_07280 hypothetical protein K07001 K07001; NTE family protein D A3224_16205 hypothetical protein K07001 K07001; NTE family protein D A3224_02260 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D A3224_05800 tRNA-processing RNAse BN K07058 K07058; membrane protein D A3224_00315 phosphoribosyl transferase K07100 K07100; putative phosphoribosyl transferase D A3224_10965 biotin--acetyl-CoA-carboxylase ligase K07113 fxsA; UPF0716 protein FxsA D A3224_03220 hypothetical protein K07146 K07146; UPF0176 protein D A3224_07970 DNA repair protein K07153 hflD; high frequency lysogenization protein D A3224_08285 arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D A3224_05145 LemA family protein K03744 lemA; LemA protein D A3224_06340 hypothetical protein K03744 lemA; LemA protein D A3224_07335 hypothetical protein K03745 slyX; SlyX protein D A3224_05720 hypothetical protein K03749 dedD; DedD protein D A3224_07945 hypothetical protein K03933 cpbD; chitin-binding protein D A3224_13890 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D A3224_13895 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D A3224_10520 DUF368 domain-containing protein K08974 K08974; putative membrane protein D A3224_12915 hypothetical protein K08983 K08983; putative membrane protein D A3224_12265 hypothetical protein K08984 yjdF; putative membrane protein D A3224_06330 hypothetical protein K08988 K08988; putative membrane protein D A3224_09270 hypothetical protein K08990 ycjF; putative membrane protein D A3224_07035 hypothetical protein K09858 K09858; SEC-C motif domain protein D A3224_13250 PhnA domain protein K06193 phnA; protein PhnA C 99997 Function unknown D A3224_06595 hypothetical protein K06867 K06867; uncharacterized protein D A3224_06335 methanol dehydrogenase K06872 K06872; uncharacterized protein D A3224_09275 hypothetical protein K06918 K06918; uncharacterized protein D A3224_04610 ATPase K06923 K06923; uncharacterized protein D A3224_08965 Fe-S protein K06938 K06938; uncharacterized protein D A3224_10625 hypothetical protein K06938 K06938; uncharacterized protein D A3224_05810 L-cystine transporter tcyP K06956 K06956; uncharacterized protein D A3224_01195 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein D A3224_04900 succinylglutamate desuccinylase K06987 K06987; uncharacterized protein D A3224_13840 hypothetical protein K07000 K07000; uncharacterized protein D A3224_04220 DNA degradation protein EddB K07004 K07004; uncharacterized protein D A3224_08090 alpha/beta hydrolase K07019 K07019; uncharacterized protein D A3224_09620 alpha/beta hydrolase K07020 K07020; uncharacterized protein D A3224_00310 hypothetical protein K07028 K07028; uncharacterized protein D A3224_04250 metalloprotease K07054 K07054; uncharacterized protein D A3224_00190 hypothetical protein K07070 K07070; uncharacterized protein D A3224_04675 epimerase K07071 K07071; uncharacterized protein D A3224_15880 permease K07089 K07089; uncharacterized protein D A3224_11700 hypothetical protein K07089 K07089; uncharacterized protein D A3224_06310 ATPase K07089 K07089; uncharacterized protein D A3224_02910 hypothetical protein K07090 K07090; uncharacterized protein D A3224_05905 hypothetical protein K07090 K07090; uncharacterized protein D A3224_12215 hypothetical protein K07090 K07090; uncharacterized protein D A3224_04820 permease K07090 K07090; uncharacterized protein D A3224_09955 hypothetical protein K07090 K07090; uncharacterized protein D A3224_12840 hypothetical protein K07093 K07093; uncharacterized protein D A3224_14225 hypoxanthine phosphoribosyltransferase K07101 K07101; uncharacterized protein D A3224_09090 YeeE/YedE K07112 K07112; uncharacterized protein D A3224_09095 hypothetical protein K07112 K07112; uncharacterized protein D A3224_05170 LppC family lipoprotein K07121 K07121; uncharacterized protein D A3224_04255 ATP-dependent protease La domain-containing protein K07157 K07157; uncharacterized protein D A3224_01965 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein D A3224_04305 hypothetical protein K09158 K09158; uncharacterized protein D A3224_12125 hypothetical protein K09160 K09160; uncharacterized protein D A3224_00795 hypothetical protein K09768 K09768; uncharacterized protein D A3224_06030 hypothetical protein K09780 K09780; uncharacterized protein D A3224_02010 hypothetical protein K09786 K09786; uncharacterized protein D A3224_10010 hypothetical protein K09791 K09791; uncharacterized protein D A3224_11050 cytochrome biogenesis protein K09792 K09792; uncharacterized protein D A3224_03485 hypothetical protein K09794 K09794; uncharacterized protein D A3224_14405 hypothetical protein K09797 K09797; uncharacterized protein D A3224_03575 RnfH family protein K09801 K09801; uncharacterized protein D A3224_06755 hypothetical protein K09807 K09807; uncharacterized protein D A3224_08565 hypothetical protein K05952 K05952; uncharacterized protein D A3224_15980 hypothetical protein K09861 K09861; uncharacterized protein D A3224_05280 DNA gyrase inhibitor K09862 K09862; uncharacterized protein D A3224_14135 hypothetical protein K09895 K09895; uncharacterized protein D A3224_09625 hypothetical protein K09898 K09898; uncharacterized protein D A3224_12130 hypothetical protein K09902 K09902; uncharacterized protein D A3224_05090 hypothetical protein K09908 K09908; uncharacterized protein D A3224_02580 PA-phosphatase K09916 K09916; uncharacterized protein D A3224_07090 hypothetical protein K09918 K09918; uncharacterized protein D A3224_13855 hypothetical protein K09920 K09920; uncharacterized protein D A3224_00845 hypothetical protein K09921 K09921; uncharacterized protein D A3224_11065 hypothetical protein K09926 K09926; uncharacterized protein D A3224_08525 ATP-binding protein K09928 K09928; uncharacterized protein D A3224_12085 DUF2063 domain-containing protein K09929 K09929; uncharacterized protein D A3224_12090 hypothetical protein K09930 K09930; uncharacterized protein D A3224_15345 hypothetical protein K09931 K09931; uncharacterized protein D A3224_10735 hypothetical protein K09938 K09938; uncharacterized protein D A3224_05470 hypothetical protein K09939 K09939; uncharacterized protein D A3224_12550 hypothetical protein K09950 K09950; uncharacterized protein D A3224_00370 hypothetical protein K09964 K09964; uncharacterized protein D A3224_15110 hypothetical protein K09966 K09966; uncharacterized protein D A3224_09725 urea carboxylase K09967 K09967; uncharacterized protein D A3224_09730 urea carboxylase K09967 K09967; uncharacterized protein D A3224_06845 hypothetical protein K09973 K09973; uncharacterized protein D A3224_03520 hypothetical protein K09977 K09977; uncharacterized protein D A3224_10505 hypothetical protein K09978 K09978; uncharacterized protein D A3224_14200 hypothetical protein K09983 K09983; uncharacterized protein D A3224_10695 hypothetical protein K09984 K09984; uncharacterized protein D A3224_08395 hypothetical protein K09986 K09986; uncharacterized protein D A3224_12105 hypothetical protein K09989 K09989; uncharacterized protein D A3224_13965 phosphate transport regulator K07220 K07220; uncharacterized protein D A3224_13920 hypothetical protein K07276 K07276; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 17, 2024