+E Transcription factors KO #

  Transcription Factors - Mixta theicola

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D C7M52_01749 dcm_2; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D C7M52_01022 dcm_1; DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D C7M52_01538 araC; Arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D C7M52_01408 rhaR; HTH-type transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D C7M52_01409 rhaS; HTH-type transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D C7M52_03931 soxS; Regulatory protein SoxS K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D C7M52_01419 marA; Multiple antibiotic resistance protein MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D C7M52_02755 rob_1; Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D C7M52_03963 rob_2; Right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D C7M52_03958 tetD; Transposon Tn10 TetD protein K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator D C7M52_02157 alkA; putative bifunctional transcriptional activator/DNA repair enzyme AlkA K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family D C7M52_00292 gcvA_1; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D C7M52_01504 gcvA_2; Glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D C7M52_03773 oxyR_4; Hydrogen peroxide-inducible genes activator K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D C7M52_03824 metR; HTH-type transcriptional regulator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D C7M52_02740 nhaR; Transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D C7M52_03751 oxyR_3; Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D C7M52_00227 argP; HTH-type transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D C7M52_01326 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D C7M52_00985 cbl; HTH-type transcriptional regulator cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D C7M52_00146 gltC_1; HTH-type transcriptional regulator GltC K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator D C7M52_02469 pgrR_6; HTH-type transcriptional regulator PgrR K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D C7M52_00984 oxyR_1; Hydrogen peroxide-inducible genes activator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D C7M52_03050 dmlR_7; HTH-type transcriptional regulator DmlR K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D C7M52_03765 gltC_3; HTH-type transcriptional regulator GltC K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator C DeoR family D C7M52_02760 deoR_2; Deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D C7M52_03198 glpR_3; Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D C7M52_02279 glpR_2; Glycerol-3-phosphate regulon repressor K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D C7M52_03974 srlR_3; Glucitol operon repressor K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D C7M52_01010 glpR_1; Glycerol-3-phosphate regulon repressor K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor C LacI family D C7M52_03448 lacI; Lactose operon repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor D C7M52_03407 xylR; Xylose operon regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D C7M52_00863 galS_1; HTH-type transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor D C7M52_00674 ccpA; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D C7M52_00258 galR; HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D C7M52_01527 malI_1; Maltose regulon regulatory protein MalI K02529 galR; LacI family transcriptional regulator, galactose operon repressor D C7M52_03596 rbsR; Ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D C7M52_03521 kdgR_3; HTH-type transcriptional regulator KdgR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D C7M52_03731 cytR_3; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D C7M52_03146 cytR_2; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D C7M52_02701 cra_1; Catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D C7M52_02891 cra_2; Catabolite repressor/activator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D C7M52_02845 ascG; HTH-type transcriptional regulator AscG K03487 ascG; LacI family transcriptional regulator, asc operon repressor D C7M52_01576 purR; HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D C7M52_03232 gntR_3; HTH-type transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D C7M52_00437 gntR_1; HTH-type transcriptional regulator GntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D C7M52_03964 malI_2; Maltose regulon regulatory protein MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein C GntR family D C7M52_00990 phnF; putative transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D C7M52_02660 yvoA; HTH-type transcriptional repressor YvoA K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D C7M52_01253 fadR; Fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D C7M52_02667 pdhR_2; Pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D C7M52_01470 pdhR_1; Pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D C7M52_03272 pdhR_4; Pyruvate dehydrogenase complex repressor K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D C7M52_04113 lldR_2; Putative L-lactate dehydrogenase operon regulatory protein K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D C7M52_03513 lldR_1; Putative L-lactate dehydrogenase operon regulatory protein K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D C7M52_00704 gabR_1; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D C7M52_01465 gabR_3; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D C7M52_01351 gabR_2; HTH-type transcriptional regulatory protein GabR K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D C7M52_00896 rspR_1; HTH-type transcriptional repressor RspR K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor C TetR/AcrR family D C7M52_02312 acrR; HTH-type transcriptional regulator AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D C7M52_03638 slmA; Nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D C7M52_01941 rutR; HTH-type transcriptional regulator RutR K09017 rutR; TetR/AcrR family transcriptional regulator D C7M52_01571 nemR; HTH-type transcriptional repressor NemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D C7M52_03753 fabR; HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator C Lrp/AsnC family D C7M52_03582 asnC; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D C7M52_02013 lrp_2; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D C7M52_02325 decR; DNA-binding transcriptional activator DecR K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D C7M52_01797 lrp_1; Leucine-responsive regulatory protein K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon C LuxR family D C7M52_01937 sdiA; Regulatory protein SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D C7M52_00172 esaR; Transcriptional activator protein EsaR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D C7M52_01038 rcsA; Transcriptional regulatory protein RcsA K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D C7M52_03197 malT; HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein C MarR family D C7M52_01567 slyA_1; Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D C7M52_01918 slyA_2; Transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D C7M52_00388 mprA; Transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D C7M52_03369 ohrR; Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D C7M52_02292 cueR; HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D C7M52_03932 soxR; Redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D C7M52_02087 bluR; HTH-type transcriptional repressor BluR K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes C Fur family D C7M52_02199 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D C7M52_03911 zur; Zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator C IclR family D C7M52_01221 kdgR_2; Pectin degradation repressor protein KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D C7M52_00817 kdgR_1; Transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor C CRP/FNR family D C7M52_03152 crp; cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D C7M52_01399 fnr; Fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family D C7M52_00493 iscR; HTH-type transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D C7M52_04042 nsrR_2; HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D C7M52_01417 ywnA; Putative HTH-type transcriptional regulator YwnA K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB C ArsR family C XRE family D C7M52_01427 sutR; HTH-type transcriptional regulator SutR K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization C PadR family C Other families D C7M52_02072 mntR; Transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D C7M52_01193 hexR_1; HTH-type transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D C7M52_02954 hexR_2; HTH-type transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D C7M52_03850 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D C7M52_03070 fis; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D C7M52_02758 trpR; Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D C7M52_02995 hypothetical protein K07724 ner; Ner family transcriptional regulator D C7M52_02709 sgrR; HTH-type transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator D C7M52_02766 nadR; Trifunctional NAD biosynthesis/regulator protein NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D C7M52_00952 puuR; HTH-type transcriptional regulator PuuR K14056 puuR; HTH-type transcriptional regulator, repressor for puuD D C7M52_02656 higA; Antitoxin HigA K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D C7M52_04088 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D C7M52_02836 dgaR; Transcriptional regulatory protein DagR K19505 gfrR; sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator D C7M52_02428 norR; Anaerobic nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D C7M52_02594 cdaR; Carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator D C7M52_02872 rocR; Arginine utilization regulatory protein RocR K06714 rocR; arginine utilization regulatory protein D C7M52_02143 modE; Transcriptional regulator ModE K02019 modE; molybdate transport system regulatory protein D C7M52_03371 hypothetical protein K07726 K07726; putative transcriptional regulator D C7M52_03373 hypothetical protein K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families D C7M52_03734 metJ; Met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D C7M52_01089 putA; Bifunctional protein PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family D C7M52_00628 bglG; Cryptic beta-glucoside bgl operon antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator C Others D C7M52_02337 bolA; DNA-binding transcriptional regulator BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D C7M52_00152 spo0C; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D C7M52_04175 spo0C; Chromosome-partitioning protein Spo0J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D C7M52_03836 rfaH; Transcription antitermination protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D C7M52_03042 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D C7M52_02207 nagC_2; N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor D C7M52_01523 nagC_1; N-acetylglucosamine repressor K15545 mlc; transcriptional regulator of PTS gene D C7M52_03385 mtlR; Mannitol operon repressor K02562 mtlR; mannitol operon repressor D C7M52_01372 tyrR; Transcriptional regulatory protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D C7M52_00545 gcvR; Glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D C7M52_01365 pspF; Psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator D C7M52_01368 pspC; Phage shock protein C K03973 pspC; phage shock protein C D C7M52_01751 hypothetical protein K07733 alpA; prophage regulatory protein D C7M52_02924 hypothetical protein K07733 alpA; prophage regulatory protein D C7M52_00195 hypothetical protein K07735 algH; putative transcriptional regulator D C7M52_02612 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D C7M52_02360 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D C7M52_02502 crl; Sigma factor-binding protein Crl K11926 crl; sigma factor-binding protein Crl D C7M52_02700 mraZ; Transcriptional regulator MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0