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Transfer RNA Biogenesis - Mycobacterium tuberculosis H37Rv
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D RVBD_2407 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonuclease complex
C tRNA splicing ligase complex
D RVBD_2631 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D RVBD_2630 hypothetical protein K24956 ZBTB8OS; protein archease
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
C tRNA import factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D RVBD_2992c glutamyl-tRNA synthetase GltS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RVBD_2845c prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D RVBD_1536 isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RVBD_0041 leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RVBD_1007c methionyl-tRNA synthetase MetS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RVBD_1292 arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RVBD_1640c lysyl-tRNA synthetase 2 LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RVBD_3598c lysyl-tRNA synthetase 1 LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RVBD_2572c aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
C Other AARSs
D RVBD_2555c alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RVBD_2357c glycyl-tRNA synthetase GlyS K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D RVBD_2614c threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RVBD_3834c seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RVBD_3580c cysteinyl-tRNA synthetase CysS1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RVBD_2448c valyl-tRNA synthase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RVBD_2580c histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D RVBD_1649 phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RVBD_1650 phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RVBD_1689 tyrosyl-tRNA synthase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RVBD_3336c tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D RVBD_1897c d-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
C AARS associated factors
D RVBD_1262c hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferase
C Methyltransferases
D RVBD_2118c RNA methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D RVBD_0208c methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
C Psudouridine synthases
D RVBD_3455c tRNA pseudouridine synthase A TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RVBD_2793c tRNA pseudouridine synthase B TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
C Thiolation factors
D RVBD_3025c cysteine desulfurase LscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
C Elongator complex
C Elongator related proteins
C Other tRNA modification factors
D RVBD_1301 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RVBD_2727c tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
B tRNA degradation factors
C TRAMP complex
C Rapid tRNA decay (RTD) pathway factors
D RVBD_2131c monophosphatase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
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AProkaryotic type
B 5'processing factors
C Ribonucrease P
D RVBD_3923c ribonuclease P protein component RnpA K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D RVBD_2407 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D RVBD_1340 ribonuclease RphA K00989 rph; ribonuclease PH [EC:2.7.7.56]
D RVBD_2681 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
C CCA adding factors
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
D RVBD_2631 hypothetical protein K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D RVBD_0041 leucyl-tRNA synthetase LeuS K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D RVBD_2845c prolyl-tRNA synthetase ProS K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D RVBD_1689 tyrosyl-tRNA synthase TyrS K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D RVBD_3336c tryptophanyl-tRNA synthetase TrpS K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D RVBD_2614c threonyl-tRNA synthetase ThrS K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D RVBD_1536 isoleucyl-tRNA synthetase IleS K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D RVBD_1640c lysyl-tRNA synthetase 2 LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RVBD_3598c lysyl-tRNA synthetase 1 LysS K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D RVBD_2555c alanyl-tRNA synthetase AlaS K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D RVBD_2448c valyl-tRNA synthase ValS K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D RVBD_1007c methionyl-tRNA synthetase MetS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D RVBD_3834c seryl-tRNA synthetase SerS K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D RVBD_2572c aspartyl-tRNA synthetase AspS K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D RVBD_3580c cysteinyl-tRNA synthetase CysS1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D RVBD_2992c glutamyl-tRNA synthetase GltS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D RVBD_1292 arginyl-tRNA synthetase ArgS K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D RVBD_1649 phenylalanyl-tRNA synthetase alpha chain PheS K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D RVBD_1650 phenylalanyl-tRNA synthetase beta chain PheT K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D RVBD_2580c histidyl-tRNA synthetase HisS K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
C Trans-editing factors
D RVBD_1897c d-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D RVBD_3224B hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
D RVBD_3752c cytidine/deoxycytidylate deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
C Dihydorouridine synthases
C Methylthiotransferases
D RVBD_2733c (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
C Methyltransferases
D RVBD_0208c methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D RVBD_2906c tRNA (guanine-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D RVBD_3366 tRNA/rRNA methylase SpoU K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D RVBD_1644 23S rRNA methyltransferase TsnR K03437 spoU; RNA methyltransferase, TrmH family
C Psudouridine synthases
D RVBD_3455c tRNA pseudouridine synthase A TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D RVBD_2793c tRNA pseudouridine synthase B TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D RVBD_3300c hypothetical protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
C Thiolation factors
D RVBD_3024c tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TrmU K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D RVBD_3025c cysteine desulfurase LscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D RVBD_0811c folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
C KEOPS/EKC complex
C Other tRNA modification factors
D RVBD_2727c tRNA delta(2)-isopentenylpyrophosphate transferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D RVBD_3625c cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D RVBD_3421c universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D RVBD_1301 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D RVBD_3419c O-sialoglycoprotein endopeptidase Gcp K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D RVBD_3422c ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
B tRNA degradation factors
C RVBD_2783c polyribonucleotide nucleotidyltransferase GpsI K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024