+F Repair protein KO
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DNA Repair and Recombination Proteins - Musa acuminata (wild Malaysian banana)
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AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 103981038 DNA oxidative demethylase ALKBH2 K10859 ALKBH2; DNA oxidative demethylase [EC:1.14.11.33]
D 103996050 DExH-box ATP-dependent RNA helicase DExH14 K18663 ASCC3; activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
D 103970096 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 103978233 uracil-DNA glycosylase, mitochondrial-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 103979850 uracil-DNA glycosylase, mitochondrial-like isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 103992180 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 103975796 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 103978026 methyl-CpG-binding domain protein 4 K10801 MBD4; methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
E 103971264 N-glycosylase/DNA lyase OGG1 K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E 103996754 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 103979379 endonuclease III homolog 2, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 103974809 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E 103970608 DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1 K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F 103977078 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F 103972121 DNA polymerase delta small subunit isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
F 103987832 uncharacterized protein LOC103987832 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
F 103970676 uncharacterized protein LOC103970676 K03505 POLD4; DNA polymerase delta subunit 4
F 103986640 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F 103998275 DNA polymerase epsilon catalytic subunit A-like K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F 103977600 DNA polymerase epsilon subunit B K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F 103993568 DNA polymerase epsilon subunit 3 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F 103973820 uncharacterized protein LOC103973820 K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
E 104000883 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 103990655 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 103995535 flap endonuclease 1-A-like isoform X1 K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 103978908 flap endonuclease 1-A K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E 103976989 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
E 103988121 DNA-repair protein XRCC1 K10803 XRCC1; DNA-repair protein XRCC1
D Other BER factors
E 103974906 tyrosyl-DNA phosphodiesterase 1 K10862 TDP1; tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
E 103974008 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 103988832 polynucleotide 3'-phosphatase ZDP isoform X2 K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E 103977826 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
E 103982752 poly [ADP-ribose] polymerase 1 K24070 PARP1; poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
E 103997513 poly [ADP-ribose] polymerase 3 K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
E 103988577 poly [ADP-ribose] polymerase 2-A K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F 103995254 DNA repair protein RAD4 isoform X1 K10838 XPC; xeroderma pigmentosum group C-complementing protein
F 103998014 ubiquitin receptor RAD23d-like K10839 RAD23; UV excision repair protein RAD23
F 103983179 ubiquitin receptor RAD23b K10839 RAD23; UV excision repair protein RAD23
F 103990580 ubiquitin receptor RAD23b-like K10839 RAD23; UV excision repair protein RAD23
F 103984049 ubiquitin receptor RAD23d-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 103977575 ubiquitin receptor RAD23d-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
F 103998312 ubiquitin receptor RAD23b-like isoform X1 K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F 103977230 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103981809 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103968770 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103987360 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103990942 cullin-4 K10609 CUL4; cullin 4
F 103982955 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 103993621 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 103972285 protein DAMAGED DNA-BINDING 2 K10140 DDB2; DNA damage-binding protein 2
E NER4 complex
F 103982797 uncharacterized protein LOC103982797 isoform X1 K15082 RAD7; DNA repair protein RAD7
F 103969241 F-box/LRR-repeat protein 14 K15082 RAD7; DNA repair protein RAD7
F 103997653 DNA repair protein RAD16 isoform X1 K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F 103985434 DNA-directed RNA polymerase II subunit 1 K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 103977408 DNA-directed RNA polymerase II subunit 1-like K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F 103999650 DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F 103998529 DNA-directed RNA polymerases II, IV and V subunit 3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F 103996368 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 103982761 DNA-directed RNA polymerase II subunit 4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F 103968748 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X2 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 103998406 DNA-directed RNA polymerase V subunit 5A-like K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 103973581 DNA-directed RNA polymerases II and IV subunit 5A K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F 103982596 DNA-directed RNA polymerases II, IV and V subunit 6A-like isoform X1 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 103979485 DNA-directed RNA polymerases II, IV and V subunit 6A-like K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F 103975523 DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F 103998751 DNA-directed RNA polymerases II, IV and V subunit 8B K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
F 103990533 DNA-directed RNA polymerases II, IV and V subunit 9A-like isoform X1 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 103982853 DNA-directed RNA polymerases II, IV and V subunit 9A-like isoform X2 K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 103999780 DNA-directed RNA polymerases II, IV and V subunit 9A K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 103984610 DNA-directed RNA polymerases II, IV and V subunit 9A-like K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F 103988947 DNA-directed RNA polymerase subunit 10-like protein isoform X2 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 103989108 DNA-directed RNA polymerase subunit 10-like protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F 103968487 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 103987598 DNA-directed RNA polymerases II, IV and V subunit 11-like K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
F 103970171 DNA-directed RNA polymerases II, IV and V subunit 12 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E Cul4-CSA complex
F 103977230 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103981809 RING-box protein 1a K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103968770 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103987360 RING-box protein 1a-like K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F 103990942 cullin-4 K10609 CUL4; cullin 4
F 103982955 cullin-4-like isoform X1 K10609 CUL4; cullin 4
F 103993621 DNA damage-binding protein 1 K10610 DDB1; DNA damage-binding protein 1
F 103988493 DNA excision repair protein ERCC-8-like isoform X1 K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F 103973674 protein CHROMATIN REMODELING 8 K10841 ERCC6; DNA excision repair protein ERCC-6
F 103994701 UV-stimulated scaffold protein A homolog isoform X1 K23720 UVSSA; UV-stimulated scaffold protein A
F 103969410 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 103983351 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
F 103975453 transcription elongation factor 1 homolog K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E 103973317 DNA repair helicase XPB1-like K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 103971675 DNA repair helicase XPD K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E 103995750 probable RNA polymerase II transcription factor B subunit 1-1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 103976531 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 103991438 RNA polymerase II transcription factor B subunit 4 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 103978675 RNA polymerase II transcription factor B subunit 2 isoform X1 K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E 103983883 RNA polymerase II transcription factor B subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 103998232 cyclin-dependent kinase D-1-like isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 103977719 cyclin-dependent kinase D-1 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 103998401 cyclin-H1-1 K06634 CCNH; cyclin H
E 103976683 uncharacterized protein LOC103976683 isoform X2 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 103987425 uncharacterized protein LOC103987425 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E 103999191 replication protein A 70 kDa DNA-binding subunit A-like isoform X1 K07466 RFA1; replication factor A1
E 103996901 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 103974419 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 103981427 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 104000590 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 103977331 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 103974821 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 103973824 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Other NER factors
E 103970985 DNA excision repair protein ERCC-1 isoform X1 K10849 ERCC1; DNA excision repair protein ERCC-1
E 103976861 DNA repair endonuclease UVH1 isoform X1 K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E 104000066 DNA repair protein UVH3 isoform X1 K10846 ERCC5; DNA excision repair protein ERCC-5
E 103976989 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E 103997067 MMS19 nucleotide excision repair protein homolog isoform X1 K15075 MET18; DNA repair/transcription protein MET18/MMS19
E 103994810 cullin-3A-like K03869 CUL3; cullin 3
E 103992128 cullin-3B K03869 CUL3; cullin 3
E 103976112 cullin-3A-like K03869 CUL3; cullin 3
E 103972946 cullin-3A-like K03869 CUL3; cullin 3
E 103972876 cullin-3A-like K03869 CUL3; cullin 3
E 103987850 transcription elongation factor B polypeptide 1 K03872 ELOC; elongin-C
E 103990052 uncharacterized protein LOC103990052 K15077 ELA1; elongin-A
E 103997396 transcription elongation factor B polypeptide 3 K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 103987730 DNA mismatch repair protein MSH2 K08735 MSH2; DNA mismatch repair protein MSH2
E 103973219 DNA mismatch repair protein MSH3 K08736 MSH3; DNA mismatch repair protein MSH3
E 103991568 DNA mismatch repair protein MSH7 K08737 MSH6; DNA mismatch repair protein MSH6
E 103985334 DNA mismatch repair protein MSH6 K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E 103985219 DNA mismatch repair protein MLH1 isoform X4 K08734 MLH1; DNA mismatch repair protein MLH1
E 103988615 DNA mismatch repair protein PMS1 isoform X1 K10858 PMS2; DNA mismatch repair protein PMS2
E 103970930 DNA mismatch repair protein MLH3 K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E 103977078 DNA polymerase delta catalytic subunit K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E 103972121 DNA polymerase delta small subunit isoform X1 K02328 POLD2; DNA polymerase delta subunit 2
E 103987832 uncharacterized protein LOC103987832 isoform X1 K03504 POLD3; DNA polymerase delta subunit 3
E 103970676 uncharacterized protein LOC103970676 K03505 POLD4; DNA polymerase delta subunit 4
E 103986640 DNA polymerase delta subunit 4 K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E 103999191 replication protein A 70 kDa DNA-binding subunit A-like isoform X1 K07466 RFA1; replication factor A1
E 103996901 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 103974419 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 103981427 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 104000590 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 103977331 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 103974821 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 103973824 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D RFC (replication factor C)
E 103981458 replication factor C subunit 1 isoform X1 K10754 RFC1; replication factor C subunit 1
E 103982782 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 103979403 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
E 103970043 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
E 103991482 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
E 103983730 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
E 103983778 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
E 103974952 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E 104000883 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
E 103990655 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
E 103975711 exonuclease 1 isoform X1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 103976408 exonuclease 1 K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E 103976989 DNA ligase 1-like K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E 103994131 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 103997159 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 103985762 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA1-core complex
E 103994536 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 103993160 BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 103989451 protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1 K10683 BARD1; BRCA1-associated RING domain protein 1
D BRCA1-A complex
E 103968849 uncharacterized protein LOC103968849 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 103968847 uncharacterized protein LOC103968847 K20776 BABAM; BRISC and BRCA1-A complex member 1
E 103979394 BRCA1-A complex subunit BRE K12173 BRE; BRCA1-A complex subunit BRE
E 103994889 uncharacterized protein LOC103994889 K11864 BRCC3; BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
D BRCA1-B complex
E 103970624 Fanconi anemia group J protein homolog isoform X2 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
E 103988945 DNA topoisomerase 2-binding protein 1 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
E 103995312 BRCT domain-containing protein At4g02110 isoform X1 K10728 TOPBP1; topoisomerase (DNA) II binding protein 1
D BRCA1-C complex
E 103994131 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 103997159 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
E 103985762 nijmegen breakage syndrome 1 protein isoform X1 K10867 NBN; nibrin
D BRCA complex
E 103986476 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 103994767 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
D RecA family proteins
E 103994767 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 103995430 DNA repair protein RAD51 homolog 2 isoform X1 K10869 RAD51L1; RAD51-like protein 1
E 103984903 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 103982327 DNA repair protein RAD51 homolog 4 isoform X1 K10871 RAD51L3; RAD51-like protein 3
E 103971819 DNA repair protein XRCC2 homolog isoform X1 K10879 XRCC2; DNA-repair protein XRCC2
E 103997870 DNA repair protein XRCC3 homolog K10880 XRCC3; DNA-repair protein XRCC3
D Rad52 family proteins
E 104000221 uncharacterized protein LOC104000221 K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 103971499 uncharacterized protein LOC103971499 K26556 RAD52-1; DNA repair RAD52-like protein 1, mitochondrial
E 103991317 uncharacterized protein LOC103991317 K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
E 103994865 uncharacterized protein LOC103994865 K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
E 103999282 uncharacterized protein LOC103999282 K26558 RAD52-2; DNA repair RAD52-like protein 2, chloroplastic
D Rad54 family proteins
E 103986954 protein CHROMATIN REMODELING 35-like isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 103985991 DNA repair and recombination protein RAD54 isoform X1 K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 103994075 SNF2 domain-containing protein CLASSY 1-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E 103991070 SNF2 domain-containing protein CLASSY 3-like K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
D RecQ family DNA helicases
E 103973822 ATP-dependent DNA helicase Q-like 1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 103982559 mediator of RNA polymerase II transcription subunit 34 isoform X1 K10899 RECQL; ATP-dependent DNA helicase Q1 [EC:5.6.2.4]
E 103993665 ATP-dependent DNA helicase Q-like SIM K10900 WRN; werner syndrome ATP-dependent helicase [EC:5.6.2.4]
E 103988081 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 103977821 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 103989315 ATP-dependent DNA helicase Q-like 5 K10730 RECQL4; ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E 103988081 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 103977821 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 103995737 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 103986661 DNA topoisomerase 3-alpha isoform X2 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 104000679 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 103997586 recQ-mediated genome instability protein 2 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D RPA (replication factor A)
E 103999191 replication protein A 70 kDa DNA-binding subunit A-like isoform X1 K07466 RFA1; replication factor A1
E 103996901 replication protein A 70 kDa DNA-binding subunit A-like K07466 RFA1; replication factor A1
E 103974419 replication protein A 70 kDa DNA-binding subunit A K07466 RFA1; replication factor A1
E 103981427 replication protein A 70 kDa DNA-binding subunit B-like K07466 RFA1; replication factor A1
E 104000590 replication protein A 32 kDa subunit A-like K10739 RFA2; replication factor A2
E 103977331 replication protein A 32 kDa subunit A-like isoform X1 K10739 RFA2; replication factor A2
E 103974821 replication protein A 32 kDa subunit B K10739 RFA2; replication factor A2
E 103973824 replication protein A 14 kDa subunit-like K10740 RPA3; replication factor A3
D Protein phosphatase 4
E 103990478 serine/threonine-protein phosphatase PP-X isozyme 2 K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 103981046 serine/threonine-protein phosphatase PP-X isozyme 2-like K15423 PPP4C; serine/threonine-protein phosphatase 4 catalytic subunit [EC:3.1.3.16]
E 103993381 serine/threonine-protein phosphatase 4 regulatory subunit 2-A K15425 PPP4R2; serine/threonine-protein phosphatase 4 regulatory subunit 2
E 103972396 serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform X1 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
E 103999472 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
E 103998516 uncharacterized protein LOC103998516 K19022 AP5B1; AP-5 complex subunit beta-1
E 103995644 AP-5 complex subunit mu K19023 AP5M1; AP-5 complex subunit mu-1
E 103979045 AP-5 complex subunit zeta-1 isoform X1 K19025 AP5Z1; AP-5 complex subunit zeta-1
D SMC5-SMC6 complex
E 103980441 structural maintenance of chromosomes protein 5 isoform X2 K22803 SMC5; structural maintenance of chromosomes protein 5
E 103984846 structural maintenance of chromosomes protein 6B-like K22804 SMC6; structural maintenance of chromosomes protein 6
E 103992474 uncharacterized protein LOC103992474 K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E 103989193 E3 SUMO-protein ligase MMS21 K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E 103981002 non-structural maintenance of chromosomes element 4 homolog A K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 103998482 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
E 103983278 non-structural maintenance of chromosomes element 4 homolog A-like K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E 103986823 crossover junction endonuclease EME1B K10882 EME1; crossover junction endonuclease EME1 [EC:3.1.22.-]
E 103971945 crossover junction endonuclease MUS81 isoform X1 K08991 MUS81; crossover junction endonuclease MUS81 [EC:3.1.22.-]
E 103977695 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 103985618 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like K10881 SHFM1; 26 proteasome complex subunit DSS1
E 103992523 uncharacterized protein LOC103992523 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 103971036 structure-specific endonuclease subunit slx1 K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E 103990658 flap endonuclease GEN-like 2 isoform X1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 103983250 flap endonuclease GEN-like 1 K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E 103991571 uncharacterized protein LOC103991571 K19026 SPG11; spatacsin
E 103979610 uncharacterized protein LOC103979610 K19027 ZFYVE26; zinc finger FYVE domain-containing protein 26
E 103981313 protein MRG1 isoform X1 K11339 MORF4L1; mortality factor 4-like protein 1
E 103969194 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X2 K22544 SAMHD1; deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
E 103989251 fidgetin-like protein 1 isoform X1 K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E 104000702 zinc finger SWIM domain-containing protein 7 isoform X3 K25770 ZSWIM7; zinc finger SWIM domain-containing protein 7
E 103974610 Werner Syndrome-like exonuclease isoform X1 K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 103974534 Werner Syndrome-like exonuclease K22807 WRNexo; werner syndrome-like exonuclease [EC:3.1.11.-]
E 103969069 uncharacterized protein LOC103969069 K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E 103968831 single-stranded DNA-binding protein WHY1, chloroplastic K26559 WHY1; single-stranded DNA-binding protein WHY1
E 103997521 single-stranded DNA-bindig protein WHY2, mitochondrial-like K26561 WHY2; single-stranded DNA-binding protein WHY2
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E 103981963 ATP-dependent DNA helicase 2 subunit KU70 isoform X1 K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E 103983894 ATP-dependent DNA helicase 2 subunit KU80 isoform X1 K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E 103994131 double-strand break repair protein MRE11 isoform X1 K10865 MRE11; double-strand break repair protein MRE11
E 103997159 DNA repair protein RAD50 isoform X1 K10866 RAD50; DNA repair protein RAD50 [EC:3.6.-.-]
D DNA Ligase 4 complex
E 103995944 DNA ligase 4 isoform X1 K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E 103981167 DNA repair protein XRCC4 isoform X1 K10886 XRCC4; DNA-repair protein XRCC4
D X-family DNA polymerases
E 103977826 DNA polymerase lambda isoform X1 K03512 POLL; DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
D Other NHEJ factors
E 103974008 transcription factor bHLH140 K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E 103982098 uncharacterized protein LOC103982098 K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
E 103968942 uncharacterized protein LOC103968942 isoform X1 K23113 SMCHD1; structural maintenance of chromosomes flexible hinge domain-containing protein 1
C FA (Fanconi anemia) pathway
D FA core complex
E 103984285 E3 ubiquitin-protein ligase FANCL K10606 FANCL; E3 ubiquitin-protein ligase FANCL [EC:2.3.2.27]
E 103976550 uncharacterized protein LOC103976550 isoform X1 K10896 FANCM; fanconi anemia group M protein
D FA core complex binding factors
E 103979448 MHF histone-fold complex subunit 1 K11511 APITD1; centromere protein S
E 103989300 centromere protein X K15360 STRA13; centromere protein X
E 103979945 ubiquitin-conjugating enzyme E2 T isoform X2 K13960 UBE2T; ubiquitin-conjugating enzyme E2 T [EC:2.3.2.23]
D Bloom's syndrome complex (BTR)
E 103988081 ATP-dependent DNA helicase Q-like 4A isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 103977821 ATP-dependent DNA helicase Q-like 3 isoform X1 K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E 103995737 DNA topoisomerase 3-beta K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 103986661 DNA topoisomerase 3-alpha isoform X2 K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E 104000679 recQ-mediated genome instability protein 1 K10990 RMI1; RecQ-mediated genome instability protein 1
E 103997586 recQ-mediated genome instability protein 2 isoform X1 K15365 RMI2; RecQ-mediated genome instability protein 2
D FANCD2-I complex
E 103982954 Fanconi anemia group D2 protein isoform X1 K10891 FANCD2; fanconi anemia group D2 protein
E 103998170 Fanconi anemia group I protein K10895 FANCI; fanconi anemia group I protein
D Downstream FA components
E 103986476 protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1 K08775 BRCA2; breast cancer 2 susceptibility protein
E 103970624 Fanconi anemia group J protein homolog isoform X2 K15362 BRIP1; fanconi anemia group J protein [EC:5.6.2.3]
D Other FA pathway factors
E 103987595 fanconi-associated nuclease 1 homolog isoform X2 K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E 103994767 DNA repair protein RAD51 homolog K04482 RAD51; DNA repair protein RAD51
E 103984903 DNA repair protein RAD51 homolog 3 isoform X1 K10870 RAD51L2; RAD51-like protein 2
E 103996743 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
E 103982871 WD repeat-containing protein 48-like isoform X1 K15361 WDR48; WD repeat-containing protein 48
E 103998873 WD repeat-containing protein 48 K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
E 103998610 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
E 103972775 phytochrome-associated serine/threonine-protein phosphatase K15498 PPP6C; serine/threonine-protein phosphatase 6 catalytic subunit [EC:3.1.3.16]
D Ubiquitin ligases
D Others
E 103976000 telomerase Cajal body protein 1 K23314 WRAP53; telomerase Cajal body protein 1
E 103985665 WD repeat-containing protein 70 K24752 WDR70; WD repeat-containing protein 70
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D 104000336 DNA polymerase eta isoform X1 K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D 103983593 DNA polymerase kappa isoform X2 K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D 104000350 DNA repair protein REV1 isoform X1 K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D 103971955 DNA polymerase zeta catalytic subunit isoform X1 K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D 103999043 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 103986980 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 103975284 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 103975338 ubiquitin-conjugating enzyme E2 2-like K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 103986603 ubiquitin-conjugating enzyme E2 2 K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D 103972091 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 103988036 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D 103998214 putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D 103973484 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 103993197 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 103999332 ubiquitin-conjugating enzyme E2 variant 1D-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 103999387 ubiquitin-conjugating enzyme E2 variant 1C K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 103969251 ubiquitin-conjugating enzyme E2 variant 1D-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 103990452 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 103977908 ubiquitin-conjugating enzyme E2 variant 1C-like K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D 103997095 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 103982287 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 103999876 ubiquitin-conjugating enzyme E2 36-like K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 103975105 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
D 103989176 ubiquitin-conjugating enzyme E2 36 K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D 104000883 proliferating cell nuclear antigen K04802 PCNA; proliferating cell nuclear antigen
D 103990655 proliferating cell nuclear antigen-like K04802 PCNA; proliferating cell nuclear antigen
B Check point factors
C Rad9-Hus1-Rad1 complex
D 103998079 cell cycle checkpoint control protein RAD9A K10994 RAD9A; cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]
D 103982381 checkpoint protein hus1 K10903 HUS1; HUS1 checkpoint protein
D 103993942 uncharacterized protein LOC103993942 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D 103994618 cell cycle checkpoint protein RAD17 isoform X1 K06662 HRAD17; cell cycle checkpoint protein
D 103982782 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 103979403 replication factor C subunit 2 K10755 RFC2_4; replication factor C subunit 2/4
D 103970043 replication factor C subunit 3-like isoform X1 K10756 RFC3_5; replication factor C subunit 3/5
D 103991482 replication factor C subunit 3 K10756 RFC3_5; replication factor C subunit 3/5
D 103983730 replication factor C subunit 5-like K10756 RFC3_5; replication factor C subunit 3/5
D 103983778 replication factor C subunit 5 K10756 RFC3_5; replication factor C subunit 3/5
D 103974952 replication factor C subunit 3-like K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D 103993942 uncharacterized protein LOC103993942 K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D 103974877 protein timeless homolog isoform X4 K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D 103978230 TIMELESS-interacting protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
C Triple T complex
D 103996743 telomere length regulation protein TEL2 homolog K11137 TELO2; telomere length regulation protein
D 103975036 uncharacterized protein LOC103975036 K20403 TTI1; TELO2-interacting protein 1
D 103985360 uncharacterized protein At2g39910 isoform X1 K23115 TTI2; TELO2-interacting protein 2
C BAG6-UBL4A-GET4 complex
D 103977803 Golgi to ER traffic protein 4 homolog K23387 GET4; golgi to ER traffic protein 4
D 103998279 Golgi to ER traffic protein 4 homolog isoform X1 K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D 103998689 serine/threonine-protein kinase ATR isoform X1 K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D 103987359 serine/threonine-protein kinase ATM K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D 103992234 14-3-3-like protein 16R K06630 YWHAE; 14-3-3 protein epsilon
D 103969326 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 103987451 14-3-3 protein 6 K06630 YWHAE; 14-3-3 protein epsilon
D 103975411 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 103969634 14-3-3 protein 6-like K06630 YWHAE; 14-3-3 protein epsilon
D 103976704 14-3-3 protein 7 isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 103982313 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 103991315 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 103997094 14-3-3 protein 9-like isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 103999286 14-3-3-like protein GF14-C K06630 YWHAE; 14-3-3 protein epsilon
D 103989175 14-3-3-like protein C K06630 YWHAE; 14-3-3 protein epsilon
D 103968654 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 103969142 14-3-3 protein 6-like K06630 YWHAE; 14-3-3 protein epsilon
D 103981492 14-3-3 protein 9-like K06630 YWHAE; 14-3-3 protein epsilon
D 103987016 14-3-3-like protein isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 103991618 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 103976428 14-3-3-like protein D K06630 YWHAE; 14-3-3 protein epsilon
D 103977518 14-3-3-like protein GF14 kappa K06630 YWHAE; 14-3-3 protein epsilon
D 103996126 14-3-3-like protein B isoform X1 K06630 YWHAE; 14-3-3 protein epsilon
D 103985456 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 103974363 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 103975043 14-3-3-like protein K06630 YWHAE; 14-3-3 protein epsilon
D 103974733 14-3-3-like protein B K06630 YWHAE; 14-3-3 protein epsilon
D 103987876 wee1-like protein kinase K06632 WEE1; wee1-like protein kinase [EC:2.7.11.1]
D 103990755 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 104000375 serine/threonine-protein kinase Nek2-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103977889 serine/threonine-protein kinase Nek6 isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103999381 serine/threonine-protein kinase Nek5-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103982981 serine/threonine-protein kinase Nek2-like isoform X2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103988508 serine/threonine-protein kinase Nek5-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103999401 serine/threonine-protein kinase Nek2-like isoform X1 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103997565 serine/threonine-protein kinase Nek2-like K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103993968 serine/threonine-protein kinase Nek2 K08857 NEK1_4_5; serine/threonine-protein kinase Nek1/4/5 [EC:2.7.11.1]
D 103982278 protein downstream neighbor of Son-like K22422 DONSON; protein downstream neighbor of Son
D 103976672 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 103977206 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 103982833 protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 K12196 VPS4; vacuolar protein-sorting-associated protein 4
D 103992736 protein SDE2 homolog K25059 SDE2; replication stress response regulator SDE2
D 103998851 protein DECREASED SIZE EXCLUSION LIMIT 1 K24770 DSE1; protein decreased size exclusion limit 1
B Other factors with a suspected DNA repair function
C DNA polymerases
D 103971247 helicase and polymerase-containing protein TEBICHI isoform X1 K02349 POLQ; DNA polymerase theta [EC:2.7.7.7]
D 103976129 DNA polymerase V K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
D 103984886 DNA-directed primase/polymerase protein isoform X2 K22761 PRIMPOL; DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
C Nucleases
D 103986880 uncharacterized protein LOC103986880 isoform X2 K15340 DCLRE1A; DNA cross-link repair 1A protein
D 103996564 protein artemis K15340 DCLRE1A; DNA cross-link repair 1A protein
D 103989722 exonuclease V, chloroplastic isoform X1 K17815 EXO5; exonuclease V [EC:3.1.-.-]
D 104000162 endonuclease V isoform X2 K21813 ENDOV; endonuclease V [EC:3.1.26.-]
D 103992914 DNA annealing helicase and endonuclease ZRANB3 isoform X1 K25861 ZRANB3; DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
D 103969205 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 103993591 endonuclease 4 isoform X1 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D 103992124 endonuclease 2 K05986 NUCS; nuclease S1 [EC:3.1.30.1]
C Helicases
D 103991021 switch 2 K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D 103993155 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 103970233 pre-mRNA-processing factor 19 K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D 103998753 cell division cycle 5-like protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D 103979470 pre-mRNA-splicing factor SPF27 homolog isoform X2 K12861 BCAS2; pre-mRNA-splicing factor SPF27
D 103970474 protein pleiotropic regulatory locus 1 K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D 103997333 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 103981441 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 103971825 ribonucleoside-diphosphate reductase large subunit-like K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 103988520 ribonucleoside-diphosphate reductase large subunit K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D 103996665 ribonucleoside-diphosphate reductase small chain-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 103987117 ribonucleoside-diphosphate reductase small chain K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 103988625 ribonucleoside-diphosphate reductase small chain-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
D 103999358 ribonucleoside-diphosphate reductase small chain-like K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D 103970096 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E 103978233 uracil-DNA glycosylase, mitochondrial-like K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 103979850 uracil-DNA glycosylase, mitochondrial-like isoform X1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E 103988753 uncharacterized protein LOC103988753 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 103992829 probable DNA-3-methyladenine glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 103999911 DNA-3-methyladenine glycosylase 1-like K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E 103992180 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
E 103975796 adenine DNA glycosylase isoform X1 K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
E 103992277 uncharacterized protein LOC103992277 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103977485 uncharacterized protein LOC103977485 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 104000141 uncharacterized protein LOC104000141 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103998382 uncharacterized protein LOC103998382 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103998430 uncharacterized protein LOC103998430 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103998466 uncharacterized protein LOC103998466 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103972369 uncharacterized protein LOC103972369 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 108952701 uncharacterized protein LOC108952701 isoform X1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
E 103990556 formamidopyrimidine-DNA glycosylase-like isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 103977258 formamidopyrimidine-DNA glycosylase-like isoform X1 K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E 103996754 endonuclease III homolog 1, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 103979379 endonuclease III homolog 2, chloroplastic isoform X1 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
E 103974809 putative DNA glycosylase At3g47830 K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
E 103999832 DNA polymerase I A, chloroplastic-like isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 103997828 DNA polymerase I A, chloroplastic-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E 103999832 DNA polymerase I A, chloroplastic-like isoform X1 K02335 polA; DNA polymerase I [EC:2.7.7.7]
E 103997828 DNA polymerase I A, chloroplastic-like K02335 polA; DNA polymerase I [EC:2.7.7.7]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E 103990661 uncharacterized protein LOC103990661 K07456 mutS2; DNA mismatch repair protein MutS2
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E 103979943 uncharacterized protein LOC103979943 K03111 ssb; single-strand DNA-binding protein
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
E 103975661 DNA repair protein recA homolog 1, chloroplastic isoform X2 K03553 recA; recombination protein RecA
E 103971763 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
E 103979375 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 103969926 uncharacterized protein LOC103969926 isoform X1 K03553 recA; recombination protein RecA
D RecFOR pathway proteins
E 103975661 DNA repair protein recA homolog 1, chloroplastic isoform X2 K03553 recA; recombination protein RecA
E 103971763 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
E 103979375 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
E 103969926 uncharacterized protein LOC103969926 isoform X1 K03553 recA; recombination protein RecA
E 103991350 uncharacterized protein LOC103991350 K04485 radA; DNA repair protein RadA/Sms
E 103987372 ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X1 K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
F 103985565 DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1 K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
F 104000608 DNA gyrase subunit B, chloroplastic/mitochondrial-like K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
F 104000511 uncharacterized protein LOC104000511 K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
D 103975661 DNA repair protein recA homolog 1, chloroplastic isoform X2 K03553 recA; recombination protein RecA
D 103971763 DNA repair protein recA homolog 3, mitochondrial-like K03553 recA; recombination protein RecA
D 103979375 DNA repair protein recA homolog 3, mitochondrial isoform X1 K03553 recA; recombination protein RecA
D 103969926 uncharacterized protein LOC103969926 isoform X1 K03553 recA; recombination protein RecA
D 103979943 uncharacterized protein LOC103979943 K03111 ssb; single-strand DNA-binding protein
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D 103997333 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D 103981441 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
C Others
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024