+E Transcription factors KO #

  Transcription Factors - Myroides sp. A21

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D MYRA21_3464 AraC-type DNA-binding domain-containing protein K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein D MYRA21_1542 AraC-type DNA-binding domain-containing protein K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors D MYRA21_2986 AraC-like ligand binding domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_2212 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_3080 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_2318 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_0667 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_3226 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_3240 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_0768 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_0778 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_1619 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_1654 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_2512 Helix-turn-helix domain/AraC-like ligand binding domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_1700 Helix-turn-helix domain/AraC-like ligand binding domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_2591 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_3434 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_0115 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_3493 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_0148 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_0150 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_1850 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_3512 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_3543 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_1919 Helix-turn-helix domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_2021 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_3779 Helix-turn-helix domain/AraC-like ligand binding domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D MYRA21_2520 AraC-type DNA-binding domain-containing protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D MYRA21_0197 AraC-type DNA-binding domain-containing protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA D MYRA21_2808 putative periplasmic ligand-binding sensor domain K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator D MYRA21_3552 AraC-type DNA-binding domain-containing protein K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D MYRA21_2963 AraC-type DNA-binding domain-containing protein K07506 K07506; AraC family transcriptional regulator D MYRA21_2593 O-6-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D MYRA21_3570 Methylated DNA-protein cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D MYRA21_2228 Helix-turn-helix domain K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-] C LysR family D MYRA21_2736 Transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D MYRA21_2427 Transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D MYRA21_0012 Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon C DeoR family C LacI family C GntR family D MYRA21_3083 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D MYRA21_3086 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D MYRA21_2827 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D MYRA21_3662 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D MYRA21_1658 transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator C Lrp/AsnC family D MYRA21_2839 Transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D MYRA21_0176 Transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D MYRA21_0337 Transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D MYRA21_1859 Transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D MYRA21_2626 Transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family C Fur family D MYRA21_2386 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D MYRA21_2220 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family C CRP/FNR family D MYRA21_2902 catabolite gene activator protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D MYRA21_0878 catabolite gene activator protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D MYRA21_2420 catabolite gene activator protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D MYRA21_3245 catabolite gene activator protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D MYRA21_1606 catabolite gene activator protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D MYRA21_3659 Cyclic nucleotide-binding domain K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D MYRA21_2081 catabolite gene activator protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein C Rrf2 family C ArsR family D MYRA21_2206 putative transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor C XRE family C PadR family D MYRA21_2041 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator D MYRA21_3759 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator C Other families D MYRA21_1035 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D MYRA21_1504 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D MYRA21_1031 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D MYRA21_0288 birA; biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D MYRA21_2183 helix-turn-helix protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D MYRA21_3513 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D MYRA21_0659 putative transcriptional regulator K07727 K07727; putative transcriptional regulator B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D MYRA21_2012 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D MYRA21_3530 pyrR; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D MYRA21_0318 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D MYRA21_2057 Putative transcriptional regulator K07735 algH; putative transcriptional regulator D MYRA21_1326 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D MYRA21_0797 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0