+E Transcription factors KO
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Transcription Factors - Myroides sp. A21
%
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D MYRA21_3464 AraC-type DNA-binding domain-containing protein K02508 hpaA; AraC family transcriptional regulator, 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein
D MYRA21_1542 AraC-type DNA-binding domain-containing protein K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D MYRA21_2986 AraC-like ligand binding domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_2212 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_3080 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_2318 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_0667 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_3226 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_3240 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_0768 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_0778 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_1619 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_1654 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_2512 Helix-turn-helix domain/AraC-like ligand binding domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_1700 Helix-turn-helix domain/AraC-like ligand binding domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_2591 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_3434 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_0115 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_3493 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_0148 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_0150 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_1850 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_3512 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_3543 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_1919 Helix-turn-helix domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_2021 AraC-type DNA-binding domain-containing protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_3779 Helix-turn-helix domain/AraC-like ligand binding domain K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D MYRA21_2520 AraC-type DNA-binding domain-containing protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D MYRA21_0197 AraC-type DNA-binding domain-containing protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D MYRA21_2808 putative periplasmic ligand-binding sensor domain K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D MYRA21_3552 AraC-type DNA-binding domain-containing protein K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
D MYRA21_2963 AraC-type DNA-binding domain-containing protein K07506 K07506; AraC family transcriptional regulator
D MYRA21_2593 O-6-methylguanine DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D MYRA21_3570 Methylated DNA-protein cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D MYRA21_2228 Helix-turn-helix domain K13530 adaA; AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
C LysR family
D MYRA21_2736 Transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D MYRA21_2427 Transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D MYRA21_0012 Transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
C DeoR family
C LacI family
C GntR family
D MYRA21_3083 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D MYRA21_3086 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D MYRA21_2827 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D MYRA21_3662 Transcriptional regulator containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
C TetR/AcrR family
D MYRA21_1658 transcriptional regulator, TetR family K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
C Lrp/AsnC family
D MYRA21_2839 Transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D MYRA21_0176 Transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D MYRA21_0337 Transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D MYRA21_1859 Transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
C LuxR family
C MarR family
D MYRA21_2626 Transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
C Fur family
D MYRA21_2386 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D MYRA21_2220 Fe2+/Zn2+ uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
C IclR family
C CRP/FNR family
D MYRA21_2902 catabolite gene activator protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D MYRA21_0878 catabolite gene activator protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D MYRA21_2420 catabolite gene activator protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D MYRA21_3245 catabolite gene activator protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D MYRA21_1606 catabolite gene activator protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D MYRA21_3659 Cyclic nucleotide-binding domain K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D MYRA21_2081 catabolite gene activator protein K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
C Rrf2 family
C ArsR family
D MYRA21_2206 putative transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
C XRE family
C PadR family
D MYRA21_2041 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D MYRA21_3759 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator
C Other families
D MYRA21_1035 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D MYRA21_1504 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D MYRA21_1031 putative transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D MYRA21_0288 birA; biotin-[acetyl-CoA-carboxylase] ligase region K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D MYRA21_2183 helix-turn-helix protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D MYRA21_3513 hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D MYRA21_0659 putative transcriptional regulator K07727 K07727; putative transcriptional regulator
B Ribbon-helix-helix
C CopG family
C Other families
B Other transcription factors
C BglG family
C Others
D MYRA21_2012 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D MYRA21_3530 pyrR; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D MYRA21_0318 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D MYRA21_2057 Putative transcriptional regulator K07735 algH; putative transcriptional regulator
D MYRA21_1326 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D MYRA21_0797 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024
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Classification taken and modified from TRANSFAC 7.0