+E Transcription factors KO #

  Transcription Factors - Myxococcus sp. MxC21-1

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D QEG98_00790 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D QEG98_21750 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D QEG98_32415 methylated-DNA--[protein]-cysteine S-methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D QEG98_13845 AlkA N-terminal domain-containing protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21] C LysR family D QEG98_34545 gcvA; transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D QEG98_04535 nhaR; transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D QEG98_15140 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator C DeoR family C LacI family C GntR family D QEG98_34565 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D QEG98_28985 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase C TetR/AcrR family D QEG98_29455 TetR family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D QEG98_37150 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator D QEG98_14390 TetR/AcrR family transcriptional regulator K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D QEG98_34945 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D QEG98_27100 TetR/AcrR family transcriptional regulator K19060 mphR; TetR/AcrR family transcriptional regulator, macrolide resistance operon repressor D QEG98_11780 TetR family transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response C Lrp/AsnC family D QEG98_01275 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family C MarR family D QEG98_36805 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D QEG98_03795 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D QEG98_27765 MerR family transcriptional regulator K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator D QEG98_01370 cobalamin-dependent protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D QEG98_05215 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator C Fur family D QEG98_19780 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D QEG98_39035 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator C IclR family C CRP/FNR family D QEG98_20220 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QEG98_27795 mrpC; Crp/Fnr family transcriptional regulator MrpC K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QEG98_10200 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QEG98_10415 cyclic nucleotide-binding domain-containing protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D QEG98_14340 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein C Rrf2 family D QEG98_38640 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor C ArsR family D QEG98_40320 metalloregulator ArsR/SmtB family transcription factor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor C XRE family D QEG98_26915 short-chain fatty acyl-CoA regulator family protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator C PadR family C Other families D QEG98_22640 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D QEG98_40940 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D QEG98_01070 BlaI/MecI/CopY family transcriptional regulator K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor D QEG98_35140 helix-turn-helix domain-containing protein K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D QEG98_27355 sigma 54-interacting transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D QEG98_21040 sigma 54-interacting transcriptional regulator K02584 nifA; Nif-specific regulatory protein B Ribbon-helix-helix C CopG family C Other families B Other transcription factors C BglG family C Others D QEG98_39685 frmR; formaldehyde-responsive transcriptional repressor FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D QEG98_41790 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QEG98_13300 ParB N-terminal domain-containing protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D QEG98_13920 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D QEG98_30880 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D QEG98_27680 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D QEG98_37540 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D QEG98_35935 PspC domain-containing protein K03973 pspC; phage shock protein C D QEG98_20970 rnk; nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D QEG98_10830 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D QEG98_17165 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D QEG98_31385 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D QEG98_39640 TraR/DksA C4-type zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor D QEG98_16085 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor D QEG98_25730 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D QEG98_26310 RNA repair transcriptional activator RtcR family protein K14414 rtcR; transcriptional regulatory protein RtcR D QEG98_27060 rtcR; RNA repair transcriptional activator RtcR K14414 rtcR; transcriptional regulatory protein RtcR D QEG98_30820 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 7, 2024 #
Classification taken and modified from TRANSFAC 7.0