+D GENES KO
#
KEGG Orthology (KO) - Neisseria brasiliensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:nbl00010]
D GJV52_08775 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GJV52_04245 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_08785 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_09950 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJV52_03140 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJV52_07075 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GJV52_03480 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJV52_05345 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJV52_05730 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GJV52_03805 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GJV52_12235 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJV52_06215 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GJV52_08630 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GJV52_11190 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GJV52_11195 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_00490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GJV52_05845 c-type cytochrome K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GJV52_01040 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GJV52_01030 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:nbl00020]
D GJV52_09340 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GJV52_08385 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D GJV52_01205 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJV52_10740 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GJV52_09345 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GJV52_09350 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_12460 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D GJV52_09325 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GJV52_09330 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GJV52_09315 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GJV52_09320 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D GJV52_01155 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GJV52_00610 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GJV52_00980 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GJV52_04860 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D GJV52_11190 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GJV52_11195 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:nbl00030]
D GJV52_04245 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_08785 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_08765 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GJV52_08770 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D GJV52_05660 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GJV52_12435 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GJV52_01220 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GJV52_04100 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GJV52_09915 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GJV52_01030 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJV52_10195 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GJV52_08760 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D GJV52_08755 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GJV52_03185 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D GJV52_03140 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJV52_09950 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:nbl00040]
D GJV52_01500 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJV52_12435 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GJV52_11755 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:nbl00051]
D GJV52_02360 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GJV52_09950 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJV52_03140 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJV52_07075 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GJV52_07240 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:nbl00052]
D GJV52_01040 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D GJV52_06915 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GJV52_01500 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJV52_01030 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJV52_08775 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:nbl00500]
D GJV52_11745 amylosucrase K05341 E2.4.1.4; amylosucrase [EC:2.4.1.4]
D GJV52_01500 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJV52_06105 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D GJV52_06110 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D GJV52_09845 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D GJV52_09855 glgP; glycogen/starch/alpha-glucan family phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D GJV52_09850 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D GJV52_07880 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D GJV52_01030 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJV52_08775 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GJV52_04245 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_08785 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_02360 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:nbl00520]
D GJV52_02530 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GJV52_02260 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D GJV52_02360 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D GJV52_06065 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GJV52_01835 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D GJV52_06080 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GJV52_03280 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D GJV52_01780 HAD-IA family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D GJV52_04650 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D GJV52_03635 NTP transferase domain-containing protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D GJV52_05865 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GJV52_10730 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GJV52_06955 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D GJV52_06945 siaC; polysialic acid capsule biosynthesis protein SiaC K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D GJV52_06950 acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D GJV52_08125 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D GJV52_08775 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GJV52_01030 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJV52_01500 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJV52_06915 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GJV52_07240 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GJV52_04245 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_08785 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_10485 2Fe-2S iron-sulfur cluster binding domain-containing protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D GJV52_06105 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:nbl00620]
D GJV52_11190 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GJV52_11195 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_10040 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D GJV52_00490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GJV52_05845 c-type cytochrome K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D GJV52_01405 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GJV52_01800 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJV52_06215 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GJV52_00250 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GJV52_08070 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GJV52_08065 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GJV52_08675 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GJV52_12460 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D GJV52_05840 lldD; FMN-dependent L-lactate dehydrogenase LldD K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D GJV52_00935 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D GJV52_06830 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D GJV52_02400 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D GJV52_07185 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GJV52_09630 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D GJV52_01470 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D GJV52_00980 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GJV52_04860 malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D GJV52_01155 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GJV52_00610 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GJV52_03880 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GJV52_08630 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GJV52_11220 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:nbl00630]
D GJV52_00980 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GJV52_09340 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D GJV52_08385 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D GJV52_01205 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJV52_07470 catalase K03781 katE; catalase [EC:1.11.1.6]
D GJV52_05665 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GJV52_01610 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GJV52_06795 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D GJV52_08330 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJV52_11810 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GJV52_02655 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D GJV52_02680 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_02675 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D GJV52_10690 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GJV52_06830 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D GJV52_08755 eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D GJV52_02425 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D GJV52_02420 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:nbl00640]
D GJV52_01405 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GJV52_01800 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_10040 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D GJV52_00250 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GJV52_08070 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GJV52_08065 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GJV52_08675 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GJV52_08385 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D GJV52_08410 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D GJV52_08415 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D GJV52_01205 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJV52_08380 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:nbl00650]
D GJV52_09325 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GJV52_09330 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GJV52_09315 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GJV52_09320 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D GJV52_01970 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GJV52_10545 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D GJV52_12460 succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D GJV52_10040 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D GJV52_01210 alcohol dehydrogenase catalytic domain-containing protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D GJV52_02255 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJV52_02250 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GJV52_02395 zinc-binding dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism [PATH:nbl00660]
D GJV52_02255 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJV52_02250 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GJV52_08295 CoA ester lyase K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D GJV52_09145 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D GJV52_10135 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GJV52_10120 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GJV52_10100 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:nbl00562]
D GJV52_07295 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GJV52_10790 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GJV52_07075 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:nbl00190]
D GJV52_05035 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D GJV52_05030 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D GJV52_05025 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D GJV52_05020 nuoD; NADH dehydrogenase (quinone) subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D GJV52_05015 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D GJV52_01170 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D GJV52_05005 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D GJV52_05000 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D GJV52_04995 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D GJV52_04975 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D GJV52_04970 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D GJV52_04965 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D GJV52_04960 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D GJV52_04955 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D GJV52_04950 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D GJV52_09325 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GJV52_09330 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GJV52_09315 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GJV52_09320 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D GJV52_03775 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D GJV52_03770 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GJV52_03765 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D GJV52_07565 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D GJV52_07570 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D GJV52_07575 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D GJV52_07580 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D GJV52_12255 cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GJV52_12260 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GJV52_12265 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D GJV52_04405 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GJV52_04395 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GJV52_04400 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GJV52_04410 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GJV52_04390 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GJV52_04425 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GJV52_04415 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GJV52_04420 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GJV52_01125 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D GJV52_04375 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GJV52_04225 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:nbl00710]
D GJV52_05730 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GJV52_03480 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJV52_05345 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJV52_03140 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJV52_09950 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJV52_01220 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D GJV52_09915 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D GJV52_07075 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GJV52_12435 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D GJV52_04100 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D GJV52_03880 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GJV52_01470 malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D GJV52_00980 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:nbl00720]
D GJV52_08630 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GJV52_03880 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GJV52_00980 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GJV52_01155 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D GJV52_00610 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D GJV52_09325 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D GJV52_09330 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D GJV52_09315 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D GJV52_09320 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D GJV52_10740 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GJV52_01205 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D GJV52_00250 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GJV52_08070 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GJV52_08065 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GJV52_08675 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GJV52_07985 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GJV52_04015 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GJV52_09790 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GJV52_01800 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJV52_01405 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:nbl00680]
D GJV52_11525 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D GJV52_02425 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D GJV52_02420 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D GJV52_11810 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GJV52_05665 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GJV52_12235 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJV52_03880 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D GJV52_00980 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GJV52_03140 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D GJV52_09950 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJV52_01405 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D GJV52_01800 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJV52_08630 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D GJV52_03805 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GJV52_02350 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GJV52_08835 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:nbl00910]
D GJV52_08970 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GJV52_08975 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GJV52_08995 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_08990 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_08980 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_08650 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D GJV52_08645 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D GJV52_02225 nosZ; TAT-dependent nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D GJV52_00665 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D GJV52_01580 DUF561 domain-containing protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D GJV52_01605 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GJV52_02975 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GJV52_08330 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJV52_11635 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:nbl00920]
D GJV52_00185 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D GJV52_00190 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D GJV52_11655 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D GJV52_11650 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D GJV52_11645 cysA; sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D GJV52_09655 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GJV52_09725 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GJV52_00200 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D GJV52_11805 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D GJV52_00005 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D GJV52_03055 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GJV52_09300 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GJV52_11005 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GJV52_12950 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GJV52_08740 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:nbl00061]
D GJV52_00250 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D GJV52_08070 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D GJV52_08065 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D GJV52_08675 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D GJV52_07215 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D GJV52_07385 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GJV52_07395 fabH; beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GJV52_07210 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GJV52_07355 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJV52_04775 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GJV52_04365 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GJV52_01425 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_13035 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:nbl00071]
D GJV52_02850 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D GJV52_01425 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_13035 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_00490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00074 Mycolic acid biosynthesis [PATH:nbl00074]
D GJV52_02455 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D GJV52_07215 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D GJV52_07385 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:nbl00561]
D GJV52_10690 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GJV52_07400 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GJV52_12000 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GJV52_03560 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJV52_11560 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJV52_13020 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:nbl00564]
D GJV52_03580 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D GJV52_12000 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GJV52_03560 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJV52_11560 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJV52_13020 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D GJV52_02635 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D GJV52_04805 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D GJV52_01345 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GJV52_09705 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D GJV52_01250 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D GJV52_08475 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D GJV52_03860 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D GJV52_09945 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D GJV52_12160 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:nbl00565]
D GJV52_02635 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:nbl00600]
D GJV52_02260 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D GJV52_02635 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D GJV52_02635 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:nbl00592]
D GJV52_02635 phospholipase K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
D GJV52_01140 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:nbl00230]
D GJV52_12010 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GJV52_01030 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJV52_10195 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D GJV52_01525 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GJV52_05290 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D GJV52_08795 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GJV52_09640 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D GJV52_00310 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D GJV52_00170 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D GJV52_11225 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D GJV52_11875 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D GJV52_05150 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GJV52_02900 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GJV52_08950 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GJV52_12030 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GJV52_09605 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GJV52_07225 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D GJV52_12230 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GJV52_10590 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GJV52_00645 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D GJV52_00465 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GJV52_08945 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D GJV52_12070 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GJV52_12080 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GJV52_00615 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GJV52_01905 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D GJV52_08935 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GJV52_10350 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D GJV52_03105 RelA/SpoT family protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D GJV52_05755 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D GJV52_10035 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GJV52_11630 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D GJV52_01310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GJV52_00660 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D GJV52_09655 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GJV52_09725 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GJV52_01095 hypothetical protein K16840 hpxQ; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
C 00240 Pyrimidine metabolism [PATH:nbl00240]
D GJV52_04040 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJV52_08095 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJV52_04025 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GJV52_06245 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GJV52_06250 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D GJV52_09415 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D GJV52_06880 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D GJV52_04710 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D GJV52_01305 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D GJV52_04825 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D GJV52_10590 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GJV52_01570 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D GJV52_13040 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D GJV52_10570 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D GJV52_12030 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GJV52_10765 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D GJV52_00615 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D GJV52_08695 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D GJV52_12070 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GJV52_12080 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D GJV52_01475 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D GJV52_01055 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GJV52_02980 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GJV52_01455 SDR family NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:nbl00250]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GJV52_07875 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GJV52_01820 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GJV52_12915 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GJV52_12920 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D GJV52_04595 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GJV52_01585 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GJV52_10035 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D GJV52_05150 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D GJV52_06245 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D GJV52_06250 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D GJV52_01970 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GJV52_10545 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D GJV52_01605 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GJV52_02975 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GJV52_08330 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJV52_04040 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJV52_08095 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJV52_04025 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GJV52_06065 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GJV52_01525 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:nbl00260]
D GJV52_01600 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJV52_03750 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GJV52_10460 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GJV52_07755 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D GJV52_12100 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D GJV52_11810 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GJV52_05665 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D GJV52_10690 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D GJV52_03805 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GJV52_02350 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GJV52_08835 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D GJV52_01455 SDR family NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D GJV52_02655 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D GJV52_02680 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_02675 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D GJV52_01345 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D GJV52_07925 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D GJV52_07935 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D GJV52_10280 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GJV52_08425 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D GJV52_08680 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GJV52_00050 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GJV52_06835 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GJV52_00595 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D GJV52_00590 aspartate aminotransferase family protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:nbl00270]
D GJV52_03055 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D GJV52_09300 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D GJV52_09795 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GJV52_03045 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GJV52_11980 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D GJV52_11910 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GJV52_11955 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GJV52_01000 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D GJV52_09605 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D GJV52_00300 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D GJV52_01845 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GJV52_07070 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D GJV52_00160 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_03505 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_06730 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07020 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07030 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_03920 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D GJV52_01600 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJV52_03750 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GJV52_10460 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GJV52_11005 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D GJV52_12950 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GJV52_06850 aminotransferase class V-fold PLP-dependent enzyme K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D GJV52_08740 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D GJV52_02995 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJV52_08290 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GJV52_13015 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GJV52_08425 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D GJV52_00980 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D GJV52_02350 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:nbl00280]
D GJV52_02995 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:nbl00290]
D GJV52_10280 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D GJV52_10135 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D GJV52_10120 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D GJV52_10100 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D GJV52_02255 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJV52_02250 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GJV52_02240 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GJV52_12175 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GJV52_02995 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJV52_12915 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GJV52_11220 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:nbl00300]
D GJV52_10460 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D GJV52_01600 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJV52_03750 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GJV52_00630 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GJV52_04270 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D GJV52_04250 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D GJV52_11640 astC; acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GJV52_00670 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D GJV52_02575 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GJV52_09290 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GJV52_03935 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GJV52_03705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GJV52_03690 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:nbl00310]
D GJV52_09350 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_08425 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D GJV52_01970 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:nbl00220]
D GJV52_02565 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D GJV52_04595 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GJV52_01585 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GJV52_08330 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJV52_04040 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJV52_08095 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D GJV52_04025 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D GJV52_01605 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GJV52_02975 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GJV52_12915 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GJV52_04720 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D GJV52_04325 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D GJV52_00205 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D GJV52_07640 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D GJV52_11640 astC; acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:nbl00330]
D GJV52_09045 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D GJV52_09050 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D GJV52_11910 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GJV52_11955 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GJV52_11980 speD; adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GJV52_06155 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D GJV52_04940 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GJV52_09660 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D GJV52_01135 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:nbl00340]
D GJV52_02275 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D GJV52_10030 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D GJV52_02745 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D GJV52_02740 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D GJV52_02720 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D GJV52_02715 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D GJV52_02730 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D GJV52_08840 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D GJV52_08845 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJV52_02280 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:nbl00350]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GJV52_08845 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJV52_01845 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GJV52_00490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GJV52_03625 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D GJV52_09120 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D GJV52_08400 hypothetical protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D GJV52_01970 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GJV52_06885 FAA hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:nbl00360]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GJV52_08845 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJV52_01845 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GJV52_01635 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00380 Tryptophan metabolism [PATH:nbl00380]
D GJV52_09350 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GJV52_07470 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:nbl00400]
D GJV52_07790 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GJV52_01865 chorismate mutase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GJV52_08150 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D GJV52_12110 type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D GJV52_09170 hypothetical protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D GJV52_08335 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D GJV52_08155 AAA family ATPase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D GJV52_11070 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D GJV52_02605 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D GJV52_00155 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GJV52_11670 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GJV52_11660 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D GJV52_00060 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D GJV52_04620 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D GJV52_08680 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D GJV52_00050 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GJV52_06835 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D GJV52_02335 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D GJV52_07520 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GJV52_08845 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJV52_01845 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:nbl00410]
D GJV52_10980 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D GJV52_11930 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:nbl00430]
D GJV52_05655 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GJV52_01605 glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D GJV52_01800 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D GJV52_01405 acetate/propionate family kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:nbl00450]
D GJV52_12950 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D GJV52_09795 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D GJV52_11790 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D GJV52_09655 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GJV52_09725 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GJV52_05780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:nbl00460]
D GJV52_05655 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GJV52_01820 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D GJV52_11810 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:nbl00470]
D GJV52_01630 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GJV52_03655 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GJV52_08425 amino acid racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D GJV52_07855 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GJV52_03675 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GJV52_09290 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D GJV52_03935 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D GJV52_01635 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:nbl00480]
D GJV52_05655 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GJV52_08290 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D GJV52_13015 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D GJV52_08815 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GJV52_02840 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GJV52_00585 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GJV52_01920 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GJV52_11600 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GJV52_10740 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D GJV52_05660 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D GJV52_08765 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GJV52_08670 redoxin domain-containing protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D GJV52_11565 redoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D GJV52_11910 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D GJV52_11955 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
D GJV52_07955 tetratricopeptide repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:nbl00511]
D GJV52_02260 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:nbl00540]
D GJV52_04770 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GJV52_05350 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GJV52_04780 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GJV52_02620 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GJV52_04760 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GJV52_01335 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GJV52_04105 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GJV52_10985 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GJV52_04110 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D GJV52_01325 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GJV52_04925 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GJV52_03050 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GJV52_07510 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GJV52_04580 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D GJV52_01300 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D GJV52_03555 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D GJV52_03990 adenylyltransferase/cytidyltransferase family protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D GJV52_01295 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D GJV52_05310 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D GJV52_09670 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D GJV52_07485 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:nbl00541]
D GJV52_01500 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D GJV52_06915 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D GJV52_06905 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GJV52_06910 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GJV52_06900 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GJV52_11850 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D GJV52_10485 2Fe-2S iron-sulfur cluster binding domain-containing protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D GJV52_06080 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D GJV52_06955 neuC; UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) K08068 siaA; UDP-N-acetylglucosamine 2-epimerase (hydrolysing) [EC:3.2.1.183]
D GJV52_06945 siaC; polysialic acid capsule biosynthesis protein SiaC K01654 neuB; N-acetylneuraminate synthase [EC:2.5.1.56]
D GJV52_06950 acylneuraminate cytidylyltransferase K00983 neuA; N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
D GJV52_08080 NAD-dependent epimerase/dehydratase family protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D GJV52_08125 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
C 00550 Peptidoglycan biosynthesis [PATH:nbl00550]
D GJV52_05865 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GJV52_10730 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GJV52_03660 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GJV52_03675 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GJV52_03705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GJV52_03655 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GJV52_03690 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GJV52_04810 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GJV52_03015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJV52_05835 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJV52_03685 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GJV52_03665 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GJV52_08340 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D GJV52_08185 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GJV52_10525 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GJV52_03710 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GJV52_10275 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GJV52_08240 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D GJV52_03700 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:nbl00552]
D GJV52_03015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJV52_05835 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJV52_08080 NAD-dependent epimerase/dehydratase family protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:nbl00543]
D GJV52_03055 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:nbl00730]
D GJV52_01290 thiC; phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D GJV52_01950 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D GJV52_10015 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJV52_03910 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D GJV52_03120 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GJV52_03895 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D GJV52_01955 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D GJV52_03905 thiE; thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D GJV52_08470 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D GJV52_05135 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GJV52_01310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:nbl00740]
D GJV52_09215 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GJV52_10555 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GJV52_08130 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GJV52_09490 riboflavin biosynthesis protein RibD K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302]
D GJV52_09425 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D GJV52_12420 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D GJV52_03325 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D GJV52_03625 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D GJV52_01955 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D GJV52_12010 NUDIX domain-containing protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D GJV52_04440 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:nbl00750]
D GJV52_01050 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D GJV52_02350 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D GJV52_04535 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D GJV52_02460 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D GJV52_12100 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:nbl00760]
D GJV52_07875 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D GJV52_07870 nadA; quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D GJV52_07860 nadC; carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D GJV52_09025 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D GJV52_12030 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D GJV52_06585 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D GJV52_10870 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D GJV52_05680 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D GJV52_11605 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D GJV52_10705 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D GJV52_02405 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D GJV52_02410 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D GJV52_01970 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D GJV52_10545 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:nbl00770]
D GJV52_02255 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D GJV52_02250 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D GJV52_02240 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D GJV52_12175 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D GJV52_11925 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D GJV52_11930 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D GJV52_03985 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase K01947 birA-coaX; biotin---[acetyl-CoA-carboxylase] ligase / type III pantothenate kinase [EC:6.3.4.15 2.7.1.33]
D GJV52_09555 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D GJV52_04745 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D GJV52_03350 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D GJV52_02455 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D GJV52_02995 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJV52_10980 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:nbl00780]
D GJV52_03435 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D GJV52_05215 methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D GJV52_07210 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GJV52_07355 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJV52_04775 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GJV52_04365 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GJV52_05210 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D GJV52_03430 DUF452 family protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D GJV52_03425 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GJV52_03420 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GJV52_03440 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D GJV52_11615 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D GJV52_03985 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase K01947 birA-coaX; biotin---[acetyl-CoA-carboxylase] ligase / type III pantothenate kinase [EC:6.3.4.15 2.7.1.33]
C 00785 Lipoic acid metabolism [PATH:nbl00785]
D GJV52_12400 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D GJV52_12395 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11190 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D GJV52_11195 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D GJV52_09345 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D GJV52_09350 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D GJV52_02655 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D GJV52_02680 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GJV52_02675 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:nbl00790]
D GJV52_12955 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D GJV52_01115 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D GJV52_12005 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D GJV52_10650 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D GJV52_01840 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D GJV52_06125 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GJV52_01540 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D GJV52_09215 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GJV52_10555 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D GJV52_04230 bifunctional aminodeoxychorismate synthase component I/aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D GJV52_07590 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GJV52_07595 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GJV52_07585 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GJV52_07740 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GJV52_07055 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GJV52_03885 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GJV52_10075 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GJV52_00295 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GJV52_10085 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D GJV52_10080 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:nbl00670]
D GJV52_06125 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D GJV52_07985 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D GJV52_04015 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D GJV52_11810 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D GJV52_08795 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D GJV52_02900 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GJV52_06280 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GJV52_02680 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D GJV52_02980 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D GJV52_09790 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D GJV52_04845 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:nbl00860]
D GJV52_05715 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJV52_02555 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D GJV52_08355 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GJV52_09985 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GJV52_02505 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D GJV52_09935 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D GJV52_12170 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D GJV52_08450 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D GJV52_05760 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D GJV52_01740 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D GJV52_09925 uroporphyrinogen-III synthase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D GJV52_11205 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D GJV52_03840 biliverdin-producing heme oxygenase K07215 pigA; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D GJV52_00580 hypothetical protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
D GJV52_11035 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D GJV52_11040 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:nbl00130]
D GJV52_02845 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D GJV52_00045 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D GJV52_02035 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D GJV52_04440 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GJV52_12025 ubiquinone biosynthesis protein UbiH K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D GJV52_04460 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D GJV52_12195 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D GJV52_04735 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D GJV52_08035 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:nbl00900]
D GJV52_03120 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D GJV52_04800 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D GJV52_09905 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D GJV52_10165 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D GJV52_09910 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D GJV52_10610 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D GJV52_03340 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D GJV52_04440 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GJV52_05125 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D GJV52_07720 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GJV52_04810 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:nbl00906]
D GJV52_09750 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D GJV52_01220 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:nbl00523]
D GJV52_06905 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GJV52_06910 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GJV52_06900 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GJV52_11850 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D GJV52_06910 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids [PATH:nbl00996]
D GJV52_02875 p-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61]
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:nbl00332]
D GJV52_04940 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D GJV52_09660 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:nbl00261]
D GJV52_09655 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D GJV52_09725 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D GJV52_01600 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D GJV52_03750 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D GJV52_00630 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D GJV52_04270 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:nbl00521]
D GJV52_08775 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D GJV52_01030 phospho-sugar mutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D GJV52_07295 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GJV52_10790 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D GJV52_06905 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GJV52_06910 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D GJV52_06900 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D GJV52_11850 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D GJV52_08775 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:nbl00525]
D GJV52_06905 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D GJV52_06910 rffG; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:nbl00401]
D GJV52_07520 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GJV52_08845 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJV52_01845 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D GJV52_00155 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GJV52_11670 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D GJV52_07385 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GJV52_07355 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJV52_04365 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D GJV52_07215 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:nbl00999]
D GJV52_03045 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D GJV52_08335 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:nbl00362]
D GJV52_09130 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D GJV52_09125 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D GJV52_09120 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D GJV52_09135 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D GJV52_09185 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D GJV52_09150 amidohydrolase family protein K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D GJV52_09145 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D GJV52_09775 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D GJV52_09140 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
C 00627 Aminobenzoate degradation [PATH:nbl00627]
D GJV52_04440 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D GJV52_02870 aldehyde dehydrogenase family protein K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67]
D GJV52_04080 Rieske 2Fe-2S domain-containing protein K03862 vanA; vanillate monooxygenase [EC:1.14.13.82]
D GJV52_04075 2Fe-2S iron-sulfur cluster binding domain-containing protein K03863 vanB; vanillate monooxygenase ferredoxin subunit
D GJV52_09130 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D GJV52_09125 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D GJV52_09120 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D GJV52_09135 amidohydrolase family protein K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:nbl00625]
D GJV52_00490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D GJV52_00495 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:nbl00626]
D GJV52_00490 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D GJV52_09130 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D GJV52_09125 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:nbl03020]
D GJV52_06395 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GJV52_06400 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GJV52_06570 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GJV52_08940 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:nbl03010]
D GJV52_10575 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GJV52_04835 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GJV52_06470 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GJV52_06565 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GJV52_06525 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GJV52_00530 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GJV52_06420 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GJV52_06510 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GJV52_03605 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GJV52_06435 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GJV52_06560 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GJV52_06415 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GJV52_06555 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GJV52_06505 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GJV52_08665 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GJV52_02795 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GJV52_06485 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GJV52_00520 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GJV52_06460 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GJV52_02640 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GJV52_08925 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GJV52_06375 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GJV52_06455 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GJV52_06440 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GJV52_06445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GJV52_06500 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GJV52_06515 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GJV52_06390 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GJV52_00515 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GJV52_06385 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GJV52_06370 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GJV52_03600 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GJV52_06490 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GJV52_06535 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GJV52_06475 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GJV52_06575 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GJV52_06520 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GJV52_02810 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GJV52_01710 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GJV52_07715 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GJV52_06465 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GJV52_06450 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GJV52_06495 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GJV52_10200 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D GJV52_07710 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GJV52_03290 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GJV52_06480 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GJV52_06530 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GJV52_01510 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GJV52_06685 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GJV52_07410 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GJV52_03285 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GJV52_07450 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GJV52_01715 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GJV52_01515 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GJV52_06550 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GJV52_09560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_04500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_06175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_07760 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_09575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_06190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_07775 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_04485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_06195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_09580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_07780 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_04480 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:nbl00970]
D GJV52_06185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_07770 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_04490 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_03740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_09570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_01850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_09010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_01900 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_04005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_07730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_09275 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GJV52_07675 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GJV52_07340 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJV52_07330 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJV52_09205 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJV52_01275 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GJV52_10175 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GJV52_10180 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GJV52_10170 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GJV52_09015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJV52_01895 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJV52_08710 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJV52_01265 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_01270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_01260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_01255 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_06340 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_04000 tRNA-His K14226 tRNA-His; tRNA His
D GJV52_06180 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJV52_07765 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJV52_09565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJV52_04495 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJV52_07085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_09225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_11690 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_01280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_02265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_11695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_12910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_04150 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GJV52_04905 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GJV52_06610 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJV52_03735 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJV52_02040 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GJV52_03370 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GJV52_00970 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJV52_04010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJV52_03995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJV52_11700 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJV52_10745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJV52_00680 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJV52_00685 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJV52_11920 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJV52_11915 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJV52_06345 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJV52_06355 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GJV52_06335 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GJV52_07345 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJV52_09210 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJV52_07325 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJV52_07335 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJV52_05715 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJV52_10500 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GJV52_10490 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GJV52_10505 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GJV52_01915 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GJV52_12925 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GJV52_02625 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GJV52_07315 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GJV52_07305 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GJV52_01725 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GJV52_08715 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GJV52_06720 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GJV52_05780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GJV52_06280 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D GJV52_04555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GJV52_07040 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GJV52_03330 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GJV52_04900 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GJV52_11160 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GJV52_10915 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GJV52_10620 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GJV52_01705 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GJV52_01700 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GJV52_07605 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GJV52_10300 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:nbl03060]
D GJV52_06540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GJV52_06360 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GJV52_07080 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GJV52_02380 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GJV52_02370 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GJV52_02385 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GJV52_07435 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJV52_02600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GJV52_07825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJV52_04510 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GJV52_09680 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D GJV52_05960 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GJV52_07005 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D GJV52_02755 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D GJV52_02760 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GJV52_02765 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D GJV52_00990 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GJV52_00125 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GJV52_03335 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GJV52_11180 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:nbl04122]
D GJV52_10015 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJV52_09405 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GJV52_13030 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GJV52_10075 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D GJV52_07055 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D GJV52_10070 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D GJV52_03890 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D GJV52_03885 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D GJV52_00295 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D GJV52_03900 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:nbl03018]
D GJV52_08525 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D GJV52_06815 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D GJV52_12235 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJV52_11880 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GJV52_03080 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GJV52_11685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GJV52_05275 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GJV52_01910 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GJV52_03065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJV52_03380 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJV52_10635 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GJV52_04375 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GJV52_04225 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GJV52_11245 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:nbl03030]
D GJV52_01665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09005 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09900 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_03240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJV52_00505 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJV52_01385 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJV52_09615 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJV52_08810 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJV52_07460 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJV52_10240 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GJV52_08915 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GJV52_10365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_12835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_08590 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GJV52_06630 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GJV52_06870 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJV52_01495 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:nbl03410]
D GJV52_02515 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GJV52_10285 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GJV52_01215 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GJV52_11555 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GJV52_02670 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D GJV52_04205 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D GJV52_04700 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GJV52_08020 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GJV52_06870 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJV52_08615 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GJV52_01495 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:nbl03420]
D GJV52_12970 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GJV52_09700 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GJV52_10265 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D GJV52_12275 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GJV52_03495 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJV52_06870 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJV52_01495 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:nbl03430]
D GJV52_05860 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GJV52_11515 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GJV52_03495 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJV52_01340 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GJV52_05130 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GJV52_08615 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GJV52_10365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_12835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_03240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJV52_07460 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJV52_00505 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJV52_09615 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJV52_01385 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJV52_01665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09005 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09900 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_08810 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJV52_01495 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GJV52_05645 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:nbl03440]
D GJV52_08615 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GJV52_10365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_12835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_02465 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GJV52_00285 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GJV52_12390 recA; recombinase RecA K03553 recA; recombination protein RecA
D GJV52_06870 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJV52_05180 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GJV52_12880 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GJV52_07500 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GJV52_07830 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GJV52_12985 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D GJV52_02935 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D GJV52_00265 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GJV52_03240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJV52_07460 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJV52_00505 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJV52_09615 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJV52_01385 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJV52_01665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09005 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09900 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_08810 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJV52_08225 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GJV52_00525 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
D GJV52_07955 tetratricopeptide repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03272 Virion - Hepatitis viruses
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:nbl02010]
D GJV52_00185 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D GJV52_00190 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D GJV52_11655 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D GJV52_11650 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D GJV52_11645 cysA; sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D GJV52_01015 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GJV52_01010 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D GJV52_01005 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GJV52_02645 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D GJV52_08520 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D GJV52_10880 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D GJV52_10885 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D GJV52_10890 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D GJV52_06770 transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D GJV52_12905 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GJV52_06775 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GJV52_06780 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GJV52_06765 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D GJV52_06790 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GJV52_00535 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D GJV52_00540 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GJV52_00545 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GJV52_00550 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GJV52_11935 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D GJV52_11940 ABC transporter permease subunit K10009 tcyB; L-cystine transport system permease protein
D GJV52_11945 ATP-binding cassette domain-containing protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D GJV52_09065 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D GJV52_09070 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein
D GJV52_09075 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D GJV52_08045 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D GJV52_01440 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D GJV52_01430 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein
D GJV52_01420 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D GJV52_06970 ctrB; capsule polysaccharide export protein CtrB K10107 kpsE; capsular polysaccharide transport system permease protein
D GJV52_06975 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D GJV52_06980 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D GJV52_00275 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D GJV52_00270 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GJV52_08825 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D GJV52_08830 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D GJV52_04125 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GJV52_02210 ABC transporter permease subunit K19341 nosY; Cu-processing system permease protein
D GJV52_02215 ATP-binding cassette domain-containing protein K19340 nosF; Cu-processing system ATP-binding protein
D GJV52_05685 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D GJV52_05690 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GJV52_09525 ATP-binding cassette domain-containing protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GJV52_07310 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GJV52_05170 ATP-binding cassette domain-containing protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D GJV52_12250 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D GJV52_12245 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D GJV52_02475 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D GJV52_02560 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D GJV52_00480 ATP-binding cassette domain-containing protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:nbl02060]
D GJV52_07250 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GJV52_07245 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D GJV52_07240 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GJV52_00040 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:nbl03070]
D GJV52_02380 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GJV52_02370 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GJV52_06360 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GJV52_07080 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GJV52_06540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GJV52_02385 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GJV52_07435 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJV52_02600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GJV52_05960 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GJV52_07825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJV52_04510 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GJV52_02755 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D GJV52_02760 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GJV52_02765 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:nbl02020]
D GJV52_00560 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJV52_00555 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GJV52_00535 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D GJV52_02520 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GJV52_06705 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D GJV52_07455 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GJV52_05975 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D GJV52_03700 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GJV52_12220 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D GJV52_08965 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJV52_10065 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJV52_08960 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D GJV52_10060 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D GJV52_08995 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_08990 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_08980 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_08985 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D GJV52_02430 fdnG; formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D GJV52_10470 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D GJV52_06230 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D GJV52_09645 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D GJV52_08330 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJV52_06300 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D GJV52_06305 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D GJV52_04545 MFS transporter K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D GJV52_07265 sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D GJV52_07260 response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D GJV52_04130 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GJV52_07695 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D GJV52_03775 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D GJV52_03770 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GJV52_03765 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D GJV52_07565 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D GJV52_07570 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D GJV52_07575 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D GJV52_07580 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D GJV52_12255 cytochrome bd-I ubiquinol oxidase subunit CydA K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D GJV52_12260 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D GJV52_12265 cydX; cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D GJV52_06965 ctrA; capsule polysaccharide export outer membrane protein CtrA K01991 wza; polysaccharide biosynthesis/export protein
D GJV52_09195 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D GJV52_03775 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:nbl02024]
D GJV52_03920 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D GJV52_10635 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GJV52_00155 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D GJV52_11670 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D GJV52_07790 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D GJV52_01425 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_13035 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_01450 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D GJV52_09215 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D GJV52_08130 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D GJV52_02320 EamA-like transporter family protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D GJV52_07975 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GJV52_07435 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJV52_06360 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GJV52_07080 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GJV52_06540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GJV52_02385 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GJV52_02600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GJV52_05960 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GJV52_07825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJV52_04510 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:nbl02040]
D GJV52_11935 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D GJV52_08910 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GJV52_04130 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D GJV52_12235 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:nbl01501]
D GJV52_03145 porin K18133 K18133; major outer membrane protein P.IB
D GJV52_04275 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D GJV52_02530 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D GJV52_07965 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJV52_07970 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GJV52_07975 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GJV52_08185 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GJV52_10525 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GJV52_03710 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GJV52_06015 PSE family carbenicillin-hydrolyzing class A beta-lactamase CARB-2 K18795 blaCARB-1; beta-lactamase class A CARB-1, PSE family [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:nbl01502]
D GJV52_05975 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D GJV52_03655 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GJV52_01630 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GJV52_03690 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D GJV52_03685 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GJV52_03665 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GJV52_03700 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:nbl01503]
D GJV52_07845 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJV52_11345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJV52_02520 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GJV52_03025 thioredoxin domain-containing protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D GJV52_04635 thioredoxin domain-containing protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D GJV52_07965 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJV52_07970 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GJV52_04770 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:nbl01000]
C 01001 Protein kinases [BR:nbl01001]
D GJV52_00560 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJV52_02785 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D GJV52_08965 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJV52_10065 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJV52_06300 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D GJV52_07265 sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:nbl01009]
D GJV52_08835 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:nbl01002]
D GJV52_00125 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GJV52_03335 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GJV52_11180 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D GJV52_03355 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GJV52_00465 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D GJV52_01525 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D GJV52_06065 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D GJV52_07645 L,D-transpeptidase family protein K19234 ynhG; L,D-transpeptidase YnhG
D GJV52_02840 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D GJV52_03525 M3 family peptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D GJV52_03700 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GJV52_05975 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D GJV52_09940 pitrilysin K01407 ptrA; protease III [EC:3.4.24.55]
D GJV52_00470 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D GJV52_05735 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D GJV52_05740 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D GJV52_12120 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D GJV52_08815 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D GJV52_02575 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D GJV52_12130 amidohydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D GJV52_03695 peptidoglycan DD-metalloendopeptidase family protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D GJV52_04565 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D GJV52_10425 pepP; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D GJV52_10395 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GJV52_04795 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D GJV52_02520 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GJV52_07220 prolyl oligopeptidase family serine peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D GJV52_10275 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GJV52_01195 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D GJV52_08240 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D GJV52_09860 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D GJV52_12410 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D GJV52_00990 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D GJV52_01135 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D GJV52_10920 PDZ domain-containing protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D GJV52_04530 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D GJV52_08580 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D GJV52_05655 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D GJV52_09085 tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D GJV52_08010 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D GJV52_08015 U32 family peptidase K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D GJV52_08605 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D GJV52_03975 tldD; metalloprotease TldD K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:nbl01003]
D GJV52_07955 tetratricopeptide repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D GJV52_06940 alpha-2,9-polysialyltransferase K12246 neuS; poly-alpha-2,8 sialosyl sialyltransferase [EC:2.4.-.-]
D GJV52_06110 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D GJV52_08340 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D GJV52_08185 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:nbl01005]
D GJV52_04770 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D GJV52_04760 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D GJV52_05350 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D GJV52_04780 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D GJV52_02620 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D GJV52_01335 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D GJV52_03050 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GJV52_07510 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D GJV52_04925 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D GJV52_10985 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D GJV52_01325 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D GJV52_04110 HAD hydrolase family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D GJV52_04105 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D GJV52_01300 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D GJV52_03990 adenylyltransferase/cytidyltransferase family protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D GJV52_05310 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D GJV52_09670 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D GJV52_07485 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D GJV52_04580 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D GJV52_03555 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D GJV52_01295 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:nbl01011]
D GJV52_05865 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D GJV52_10730 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D GJV52_03660 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D GJV52_03675 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D GJV52_03705 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D GJV52_03655 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D GJV52_01630 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D GJV52_07855 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D GJV52_08580 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D GJV52_03685 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D GJV52_03665 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D GJV52_03015 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJV52_05835 phosphatase PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D GJV52_04630 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GJV52_08185 PBP1A family penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D GJV52_10525 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D GJV52_03710 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GJV52_10275 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D GJV52_08240 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D GJV52_01195 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D GJV52_08340 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D GJV52_07645 L,D-transpeptidase family protein K19234 ynhG; L,D-transpeptidase YnhG
D GJV52_05975 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D GJV52_03700 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GJV52_03695 peptidoglycan DD-metalloendopeptidase family protein K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D GJV52_08955 transglycosylase SLT domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D GJV52_05950 murein transglycosylase K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D GJV52_00510 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D GJV52_11545 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D GJV52_01480 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D GJV52_05195 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D GJV52_07845 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJV52_11345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJV52_01485 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:nbl01004]
D GJV52_07385 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D GJV52_07395 fabH; beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D GJV52_07210 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D GJV52_07355 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D GJV52_04775 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D GJV52_04365 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D GJV52_01140 yciA; acyl-CoA thioester hydrolase YciA K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D GJV52_06750 YbgC/FadM family acyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-]
D GJV52_01425 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_13035 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_07400 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D GJV52_12000 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D GJV52_03560 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D GJV52_11560 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:nbl01006]
D GJV52_05125 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D GJV52_07720 ispB; octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D GJV52_04810 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D GJV52_09750 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D GJV52_11065 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GJV52_04735 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D GJV52_00045 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:nbl01007]
D GJV52_05715 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJV52_01915 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GJV52_04190 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D GJV52_07605 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GJV52_10300 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GJV52_06720 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GJV52_11160 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GJV52_05780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GJV52_03330 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GJV52_04555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GJV52_07040 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GJV52_04900 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GJV52_02625 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GJV52_10620 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GJV52_07315 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GJV52_07305 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GJV52_08715 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GJV52_10915 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GJV52_01725 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GJV52_12925 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GJV52_01705 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GJV52_01700 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GJV52_01770 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D GJV52_12915 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D GJV52_01845 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D GJV52_00670 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D GJV52_08845 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D GJV52_03425 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D GJV52_11640 astC; acetylornithine/succinylornithine family transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D GJV52_00595 diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D GJV52_03420 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D GJV52_08355 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D GJV52_02995 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D GJV52_04230 bifunctional aminodeoxychorismate synthase component I/aminodeoxychorismate lyase K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D GJV52_02350 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:nbl00194]
D GJV52_04390 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D GJV52_04395 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D GJV52_04400 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D GJV52_04405 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D GJV52_04410 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D GJV52_04415 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D GJV52_04420 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D GJV52_04425 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GJV52_04430 F0F1 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:nbl03000]
D GJV52_00160 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_03505 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_06730 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07020 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07030 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_03785 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D GJV52_04890 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D GJV52_08460 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D GJV52_01925 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D GJV52_03090 FCD domain-containing protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D GJV52_04095 FCD domain-containing protein K11475 vanR; GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
D GJV52_07960 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D GJV52_01640 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GJV52_02685 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GJV52_00350 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D GJV52_02080 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D GJV52_00115 merR; Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D GJV52_00090 merD; mercury resistance co-regulator MerD K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein
D GJV52_09395 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D GJV52_11095 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D GJV52_04260 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D GJV52_01450 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D GJV52_08455 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D GJV52_10020 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D GJV52_07535 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D GJV52_11115 helix-turn-helix domain-containing protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D GJV52_03245 metalloregulator ArsR/SmtB family transcription factor K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D GJV52_08780 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D GJV52_02910 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GJV52_07175 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D GJV52_10700 CdaR family transcriptional regulator K02647 cdaR; carbohydrate diacid regulator
D GJV52_10670 transporter K02019 modE; molybdate transport system regulatory protein
D GJV52_02230 4Fe-4S binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D GJV52_03165 BolA/IbaG family iron-sulfur metabolism protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D GJV52_04435 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GJV52_07125 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D GJV52_10945 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D GJV52_06165 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GJV52_08140 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D GJV52_03725 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:nbl03021]
D GJV52_06570 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GJV52_06395 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GJV52_06400 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GJV52_08940 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GJV52_08910 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D GJV52_05250 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D GJV52_02550 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D GJV52_04130 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D GJV52_08560 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GJV52_09420 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GJV52_06365 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GJV52_03760 stringent starvation protein A K03599 sspA; stringent starvation protein A
D GJV52_03755 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D GJV52_06165 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GJV52_10370 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D GJV52_01520 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D GJV52_01910 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:nbl03019]
D GJV52_06815 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D GJV52_07805 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D GJV52_09435 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GJV52_11685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GJV52_07995 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D GJV52_03080 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D GJV52_05275 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GJV52_12235 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJV52_11880 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GJV52_01910 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D GJV52_03065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJV52_03380 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJV52_10635 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GJV52_04375 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D GJV52_04225 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D GJV52_11245 pcnB; polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D GJV52_08525 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D GJV52_00030 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D GJV52_06615 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:nbl03011]
D GJV52_10575 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D GJV52_04835 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D GJV52_06470 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D GJV52_06565 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D GJV52_06525 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D GJV52_00530 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D GJV52_06420 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D GJV52_06510 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D GJV52_03605 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D GJV52_06435 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D GJV52_06560 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D GJV52_06415 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D GJV52_06555 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D GJV52_06505 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D GJV52_08665 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D GJV52_02795 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D GJV52_06485 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D GJV52_00520 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D GJV52_06460 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D GJV52_02640 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D GJV52_08925 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D GJV52_06375 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D GJV52_06455 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D GJV52_06440 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D GJV52_06445 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D GJV52_06500 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D GJV52_06515 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D GJV52_00515 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D GJV52_06385 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D GJV52_06370 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D GJV52_06390 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D GJV52_03600 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D GJV52_06490 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D GJV52_06535 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D GJV52_06475 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D GJV52_06575 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D GJV52_06520 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D GJV52_02810 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D GJV52_01710 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D GJV52_07715 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D GJV52_06465 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D GJV52_06450 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D GJV52_06495 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D GJV52_07710 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D GJV52_03290 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D GJV52_06480 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D GJV52_06530 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D GJV52_01510 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GJV52_06685 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D GJV52_07410 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D GJV52_03285 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D GJV52_07450 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D GJV52_01715 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D GJV52_01515 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GJV52_06550 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D GJV52_10200 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D GJV52_06195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_09580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_07780 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_04480 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_09560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_04500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_06175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_07760 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_09575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_06190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_07775 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_04485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:nbl03009]
D GJV52_09435 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GJV52_07995 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D GJV52_09445 GTPase Era K03595 era; GTPase
D GJV52_06735 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D GJV52_06165 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D GJV52_08560 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D GJV52_09420 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D GJV52_06365 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D GJV52_09890 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D GJV52_01565 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D GJV52_06290 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GJV52_10775 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D GJV52_06325 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D GJV52_07300 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D GJV52_06645 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GJV52_03720 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D GJV52_04590 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GJV52_07425 tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D GJV52_07255 16S rRNA methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D GJV52_01035 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D GJV52_10390 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D GJV52_06595 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D GJV52_09965 rlmJ; 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D GJV52_11530 methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D GJV52_02440 class I SAM-dependent RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D GJV52_10595 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D GJV52_07650 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D GJV52_04470 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GJV52_10615 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GJV52_01045 pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D GJV52_06810 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D GJV52_09600 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D GJV52_10750 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D GJV52_00485 pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D GJV52_04200 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D GJV52_02800 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D GJV52_08060 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D GJV52_08640 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D GJV52_06815 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D GJV52_07805 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D GJV52_10950 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D GJV52_05135 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D GJV52_10630 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D GJV52_00020 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D GJV52_09710 hflX; GTPase HflX K03665 hflX; GTPase
D GJV52_05285 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GJV52_08935 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D GJV52_12310 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D GJV52_08555 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D GJV52_03260 RNA-binding protein K14761 rlbA; ribosome-associated protein
D GJV52_06590 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D GJV52_02500 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D GJV52_10385 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D GJV52_08610 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D GJV52_04135 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D GJV52_07610 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D GJV52_07415 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:nbl03016]
D GJV52_12900 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D GJV52_05715 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJV52_10915 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D GJV52_03330 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D GJV52_07040 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GJV52_05780 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D GJV52_01915 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D GJV52_11160 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GJV52_04900 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D GJV52_02625 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GJV52_12925 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D GJV52_01725 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D GJV52_08715 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D GJV52_06720 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D GJV52_04555 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D GJV52_10620 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D GJV52_01705 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D GJV52_01700 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D GJV52_07605 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GJV52_10300 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D GJV52_03180 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D GJV52_02750 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GJV52_11725 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D GJV52_05315 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D GJV52_03150 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D GJV52_12305 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D GJV52_10015 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJV52_05285 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D GJV52_11065 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D GJV52_05770 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D GJV52_06675 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GJV52_07445 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D GJV52_05120 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D GJV52_01595 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D GJV52_05070 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D GJV52_12635 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D GJV52_07940 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D GJV52_07315 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D GJV52_07305 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D GJV52_04190 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D GJV52_08300 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D GJV52_02930 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D GJV52_11710 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D GJV52_08365 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D GJV52_10785 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D GJV52_01795 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D GJV52_02805 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D GJV52_05200 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D GJV52_00240 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D GJV52_05055 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D GJV52_04470 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GJV52_10615 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D GJV52_13030 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D GJV52_00225 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D GJV52_09405 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D GJV52_10005 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D GJV52_12200 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D GJV52_08075 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D GJV52_07585 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D GJV52_07590 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D GJV52_07595 radical SAM protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D GJV52_07740 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D GJV52_11990 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D GJV52_01735 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D GJV52_00245 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D GJV52_04195 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D GJV52_08215 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D GJV52_07850 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D GJV52_09035 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D GJV52_11685 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D GJV52_11880 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D GJV52_12530 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:nbl03012]
D GJV52_08565 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GJV52_01720 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GJV52_11765 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D GJV52_04830 elongation factor Ts K02357 tsf; elongation factor Ts
D GJV52_06350 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJV52_06430 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJV52_06425 fusA; elongation factor G K02355 fusA; elongation factor G
D GJV52_01805 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D GJV52_04815 ribosome recycling factor K02838 frr; ribosome recycling factor
D GJV52_03955 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D GJV52_10410 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D GJV52_06545 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D GJV52_12440 efp; elongation factor P K02356 efp; elongation factor P
D GJV52_05160 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D GJV52_01980 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D GJV52_04320 peptide chain release factor H K02839 prfH; peptide chain release factor
C 03110 Chaperones and folding catalysts [BR:nbl03110]
D GJV52_00395 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D GJV52_10305 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D GJV52_01200 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D GJV52_03065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJV52_09760 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D GJV52_03380 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJV52_07050 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GJV52_09995 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D GJV52_04355 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D GJV52_03060 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GJV52_00255 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D GJV52_03385 co-chaperone GroES K04078 groES; chaperonin GroES
D GJV52_02520 Do family serine endopeptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D GJV52_10395 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D GJV52_04425 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D GJV52_07825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJV52_04865 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D GJV52_12430 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D GJV52_13025 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D GJV52_02260 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D GJV52_09975 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D GJV52_10090 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D GJV52_00290 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D GJV52_08805 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D GJV52_05670 DUF2061 domain-containing protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D GJV52_09840 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D GJV52_04660 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D GJV52_01415 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D GJV52_03100 grxB; glutaredoxin, GrxB family K03675 grxB; glutaredoxin 2
D GJV52_07810 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D GJV52_10770 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D GJV52_03025 thioredoxin domain-containing protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D GJV52_04635 thioredoxin domain-containing protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D GJV52_01875 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D GJV52_08220 thioredoxin fold domain-containing protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D GJV52_12960 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:nbl04131]
D GJV52_10590 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D GJV52_04475 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D GJV52_07005 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D GJV52_03480 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJV52_05345 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJV52_03805 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GJV52_06215 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:nbl03032]
D GJV52_08590 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D GJV52_00160 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_03505 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_06730 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07020 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07030 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_05515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GJV52_12415 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GJV52_01695 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GJV52_10580 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GJV52_07455 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GJV52_10240 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D GJV52_08915 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D GJV52_10365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_12835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_03240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJV52_07460 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJV52_08810 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJV52_09615 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJV52_01385 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJV52_01665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09005 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09900 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_00505 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJV52_06630 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D GJV52_06870 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJV52_01495 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GJV52_05645 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D GJV52_10965 DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D GJV52_10140 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GJV52_07465 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GJV52_07270 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GJV52_08535 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GJV52_06320 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GJV52_12825 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:nbl03036]
D GJV52_07955 tetratricopeptide repeat protein K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255]
D GJV52_00160 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_03505 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_06730 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07020 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07030 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_09435 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D GJV52_05515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GJV52_12415 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GJV52_01695 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GJV52_10580 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GJV52_07455 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D GJV52_02910 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GJV52_10635 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D GJV52_01640 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GJV52_02685 winged helix-turn-helix transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D GJV52_02960 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D GJV52_09030 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D GJV52_00010 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D GJV52_03645 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GJV52_12240 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D GJV52_05690 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GJV52_03710 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D GJV52_09820 DUF87 domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GJV52_09875 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GJV52_10850 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D GJV52_03715 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D GJV52_03650 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D GJV52_03670 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D GJV52_05685 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D GJV52_03640 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GJV52_03590 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D GJV52_10585 zapE; cell division protein ZapE K06916 zapE; cell division protein ZapE
D GJV52_07845 AMIN domain-containing protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJV52_11345 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D GJV52_07965 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJV52_04875 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D GJV52_04880 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D GJV52_04885 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D GJV52_10510 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GJV52_10515 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D GJV52_10520 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D GJV52_10530 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D GJV52_06640 AAA family ATPase K03496 parA; chromosome partitioning protein
D GJV52_04435 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D GJV52_07270 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GJV52_08535 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GJV52_06675 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D GJV52_06645 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D GJV52_03130 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D GJV52_12465 tyrosine-type recombinase/integrase K03733 xerC; integrase/recombinase XerC
D GJV52_10665 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D GJV52_04145 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GJV52_08190 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:nbl03400]
D GJV52_04935 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D GJV52_10285 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D GJV52_01215 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D GJV52_02515 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D GJV52_02450 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D GJV52_01055 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D GJV52_04205 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D GJV52_02670 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D GJV52_11555 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D GJV52_04700 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GJV52_08020 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D GJV52_08615 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D GJV52_01495 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D GJV52_06870 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D GJV52_09700 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D GJV52_10265 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D GJV52_12275 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D GJV52_03495 AAA family ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D GJV52_06395 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D GJV52_06400 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D GJV52_06570 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D GJV52_08940 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D GJV52_12970 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D GJV52_05860 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D GJV52_11515 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D GJV52_01340 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D GJV52_05130 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D GJV52_03240 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D GJV52_07460 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D GJV52_08810 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D GJV52_09615 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D GJV52_01385 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D GJV52_01665 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09005 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_09900 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D GJV52_00505 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D GJV52_10365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_12835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_05645 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D GJV52_12985 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D GJV52_02935 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D GJV52_00265 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D GJV52_12390 recA; recombinase RecA K03553 recA; recombination protein RecA
D GJV52_05180 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D GJV52_12880 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D GJV52_07500 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D GJV52_08225 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D GJV52_00525 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D GJV52_11585 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D GJV52_07830 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D GJV52_02465 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D GJV52_00285 recR; recombination protein RecR K06187 recR; recombination protein RecR
D GJV52_10685 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D GJV52_08705 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D GJV52_11315 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D GJV52_08275 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GJV52_08545 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D GJV52_10140 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D GJV52_07465 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D GJV52_06320 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D GJV52_05515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D GJV52_12415 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D GJV52_02910 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D GJV52_01695 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D GJV52_10580 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D GJV52_05275 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D GJV52_00195 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D GJV52_01615 recX; recombination regulator RecX K03565 recX; regulatory protein
D GJV52_12285 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D GJV52_05240 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D GJV52_12070 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D GJV52_12080 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:nbl03029]
D GJV52_03770 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D GJV52_08565 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D GJV52_01720 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D GJV52_04830 elongation factor Ts K02357 tsf; elongation factor Ts
D GJV52_06350 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJV52_06430 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJV52_06425 fusA; elongation factor G K02355 fusA; elongation factor G
D GJV52_09445 GTPase Era K03595 era; GTPase
D GJV52_07605 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D GJV52_07040 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D GJV52_02625 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D GJV52_11160 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D GJV52_10500 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D GJV52_10490 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D GJV52_10505 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D GJV52_10365 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_12835 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D GJV52_04790 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D GJV52_03065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJV52_03060 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D GJV52_03380 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJV52_03385 co-chaperone GroES K04078 groES; chaperonin GroES
D GJV52_07050 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D GJV52_10015 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJV52_09995 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D GJV52_10770 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D GJV52_04145 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D GJV52_07435 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJV52_02270 redoxin domain-containing protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:nbl02000]
D GJV52_09525 ATP-binding cassette domain-containing protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D GJV52_07310 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D GJV52_05170 ATP-binding cassette domain-containing protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D GJV52_12250 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D GJV52_12245 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D GJV52_02475 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D GJV52_02560 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D GJV52_00480 ATP-binding cassette domain-containing protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D GJV52_10860 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D GJV52_00185 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D GJV52_00190 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D GJV52_11655 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D GJV52_11650 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D GJV52_11645 cysA; sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D GJV52_01015 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D GJV52_01010 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D GJV52_01005 ATP-binding cassette domain-containing protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D GJV52_02645 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D GJV52_08520 extracellular solute-binding protein K11073 potF; putrescine transport system substrate-binding protein
D GJV52_10880 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D GJV52_10885 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D GJV52_10890 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D GJV52_06775 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D GJV52_06780 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D GJV52_06790 ATP-binding cassette domain-containing protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D GJV52_06770 transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D GJV52_12905 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D GJV52_06765 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D GJV52_00535 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D GJV52_00540 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D GJV52_00545 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D GJV52_00550 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D GJV52_11935 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D GJV52_11940 ABC transporter permease subunit K10009 tcyB; L-cystine transport system permease protein
D GJV52_11945 ATP-binding cassette domain-containing protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D GJV52_09065 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D GJV52_09070 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein
D GJV52_09075 ATP-binding cassette domain-containing protein K02071 metN; D-methionine transport system ATP-binding protein
D GJV52_08720 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D GJV52_09110 ABC transporter permease subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D GJV52_01555 ATP-binding cassette domain-containing protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D GJV52_08045 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D GJV52_01440 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D GJV52_01430 ABC transporter permease subunit K13895 yejE; microcin C transport system permease protein
D GJV52_01420 dipeptide ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D GJV52_03410 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D GJV52_03445 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D GJV52_03415 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein
D GJV52_03450 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D GJV52_05805 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D GJV52_08865 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D GJV52_05800 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D GJV52_08860 iron chelate uptake ABC transporter family permease subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D GJV52_05810 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D GJV52_08855 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D GJV52_08510 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D GJV52_08505 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D GJV52_08500 ATP-binding cassette domain-containing protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D GJV52_06975 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D GJV52_06970 ctrB; capsule polysaccharide export protein CtrB K10107 kpsE; capsular polysaccharide transport system permease protein
D GJV52_06980 ATP-binding cassette domain-containing protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D GJV52_08825 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D GJV52_08830 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D GJV52_04125 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D GJV52_02210 ABC transporter permease subunit K19341 nosY; Cu-processing system permease protein
D GJV52_02215 ATP-binding cassette domain-containing protein K19340 nosF; Cu-processing system ATP-binding protein
D GJV52_00275 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D GJV52_00270 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D GJV52_05685 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D GJV52_05690 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D GJV52_06095 metal-dependent hydrolase K01992 ABC-2.P; ABC-2 type transport system permease protein
D GJV52_12060 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein
D GJV52_06130 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D GJV52_09980 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D GJV52_10735 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D GJV52_01760 gluP; glucose/galactose MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D GJV52_09155 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D GJV52_09175 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D GJV52_02860 mhpT; 3-(3-hydroxy-phenyl)propionate transporter MhpT K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter
D GJV52_04085 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D GJV52_02365 MFS transporter K26744 vanK; MFS transporter, AAHS family, vanillate permease
D GJV52_04370 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D GJV52_04545 MFS transporter K11382 pgtP; MFS transporter, OPA family, phosphoglycerate transporter protein
D GJV52_08970 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GJV52_08975 MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D GJV52_04275 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D GJV52_02340 Bcr/CflA family efflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D GJV52_10450 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D GJV52_12125 MFS transporter K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D GJV52_02665 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D GJV52_07250 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D GJV52_07245 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D GJV52_07240 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D GJV52_00040 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D GJV52_10260 aqpZ; aquaporin Z K06188 aqpZ; aquaporin Z
D GJV52_06235 amt; ammonium transporter K03320 amt; ammonium transporter, Amt family
D GJV52_00585 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GJV52_01920 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GJV52_11600 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D GJV52_03760 stringent starvation protein A K03599 sspA; stringent starvation protein A
D GJV52_04740 BAX inhibitor (BI)-1/YccA family protein K19416 yccA; modulator of FtsH protease
D GJV52_02415 formate/nitrite transporter K21993 fdhC; formate transporter
D GJV52_04360 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D GJV52_06100 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D GJV52_03790 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D GJV52_07545 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D GJV52_07550 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D GJV52_11025 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D GJV52_10840 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D GJV52_00110 merT; mercuric ion transporter MerT K08363 merT; mercuric ion transport protein
D GJV52_00105 merP; mercury resistance system periplasmic binding protein MerP K08364 merP; periplasmic mercuric ion binding protein
D GJV52_00100 merC; organomercurial transporter MerC K19058 merC; mercuric ion transport protein
D GJV52_03145 porin K18133 K18133; major outer membrane protein P.IB
D GJV52_02955 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D GJV52_08465 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D GJV52_06220 hypothetical protein K06076 fadL; long-chain fatty acid transport protein
D GJV52_03400 TonB-dependent receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D GJV52_03845 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D GJV52_08870 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D GJV52_03540 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GJV52_03870 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GJV52_08325 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GJV52_12885 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D GJV52_07975 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GJV52_06965 ctrA; capsule polysaccharide export outer membrane protein CtrA K01991 wza; polysaccharide biosynthesis/export protein
D GJV52_04790 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D GJV52_00635 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D GJV52_09595 bamD; outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D GJV52_04265 bamE; outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D GJV52_05110 BamA/TamA family outer membrane protein K07278 tamA; translocation and assembly module TamA
D GJV52_05105 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D GJV52_04170 calcium-binding protein K21449 ata; trimeric autotransporter adhesin
D GJV52_06620 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D GJV52_10825 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D GJV52_10830 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D GJV52_04160 hypothetical protein K19233 btaF; ECM component-binding autotransporter adhesin
D GJV52_04120 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D GJV52_04115 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D GJV52_04655 lptD; LPS assembly protein LptD K04744 lptD; LPS-assembly protein
D GJV52_09610 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D GJV52_02495 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D GJV52_04335 CidA/LrgA family protein K06518 cidA; holin-like protein
D GJV52_05075 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease
D GJV52_07970 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GJV52_04305 hypothetical protein K11741 sugE; quaternary ammonium compound-resistance protein SugE
D GJV52_07980 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D GJV52_08395 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D GJV52_08350 EamA family transporter K03298 TC.DME; drug/metabolite transporter, DME family
D GJV52_05970 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D GJV52_02320 EamA-like transporter family protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D GJV52_03945 TRAP transporter large permease subunit K07084 yuiF; putative amino acid transporter
D GJV52_03190 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D GJV52_10695 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D GJV52_12220 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D GJV52_07600 L-lactate permease K03303 lutP; lactate permease
D GJV52_07900 BCCT family transporter K05020 opuD; glycine betaine transporter
D GJV52_02815 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D GJV52_07895 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein
D GJV52_02190 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter
D GJV52_08245 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D GJV52_01655 cation acetate symporter K14393 actP; cation/acetate symporter
D GJV52_04755 sodium/solute symporter K14393 actP; cation/acetate symporter
D GJV52_05115 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D GJV52_06990 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D GJV52_01755 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D GJV52_02525 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D GJV52_02535 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D GJV52_07350 potassium transporter K03455 KEA1_2_3; K+:H+ antiporter
D GJV52_01505 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D GJV52_01180 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D GJV52_10565 uracil permease K02824 uraA; uracil permease
D GJV52_00625 xanthine permease K16346 xanQ; xanthine permease XanQ
D GJV52_08375 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D GJV52_03535 tryptophan permease K03835 mtr; tryptophan-specific transport protein
D GJV52_04295 chloride channel protein EriC K03281 clcA; chloride channel protein, CIC family
D GJV52_06670 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D GJV52_08230 STAS domain-containing protein K03321 TC.SULP; sulfate permease, SulP family
D GJV52_06665 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D GJV52_07005 TRC40/GET3/ArsA family transport-energizing ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D GJV52_00430 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D GJV52_11105 arsB; ACR3 family arsenite efflux transporter K03325 ACR3; arsenite transporter
D GJV52_04630 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D GJV52_11840 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D GJV52_08370 AEC family transporter K24180 mleP; malate permease and related proteins
D GJV52_08800 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D GJV52_06010 LysE family translocator K05834 rhtB; homoserine/homoserine lactone efflux protein
D GJV52_10330 hypothetical protein K05835 rhtC; threonine efflux protein
D GJV52_02915 LysE family translocator K05835 rhtC; threonine efflux protein
D GJV52_01020 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D GJV52_01025 AzlD family protein K26606 azlD; branched chain amino acid efflux pump
D GJV52_06705 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D GJV52_07735 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter
D GJV52_03670 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D GJV52_04475 UPF0016 domain-containing protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D GJV52_07540 TonB family protein K03832 tonB; periplasmic protein TonB
D GJV52_09285 TonB family protein K03832 tonB; periplasmic protein TonB
D GJV52_01535 cell division protein FtsN K03646 tolA; colicin import membrane protein
D GJV52_03030 cell division protein FtsN K03646 tolA; colicin import membrane protein
D GJV52_08995 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_08990 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_08980 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D GJV52_02430 fdnG; formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3]
D GJV52_05895 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D GJV52_07965 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJV52_02480 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D GJV52_00425 hypothetical protein K05770 TSPO; translocator protein
C 02044 Secretion system [BR:nbl02044]
D GJV52_05895 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D GJV52_03355 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GJV52_07695 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D GJV52_03365 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D GJV52_03360 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GJV52_02485 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D GJV52_10205 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D GJV52_10600 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D GJV52_08180 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D GJV52_08175 pilus assembly protein PilP K02663 pilN; type IV pilus assembly protein PilN
D GJV52_08170 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D GJV52_08165 pilin assembly protein K02665 pilP; type IV pilus assembly protein PilP
D GJV52_08160 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D GJV52_06145 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D GJV52_06140 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D GJV52_10230 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D GJV52_10225 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D GJV52_10210 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D GJV52_04020 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D GJV52_01380 pilus assembly protein K02676 pilZ; type IV pilus assembly protein PilZ
D GJV52_10235 prepilin-type N-terminal cleavage/methylation domain-containing protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D GJV52_06160 YggT family protein K02221 yggT; YggT family protein
D GJV52_06200 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D GJV52_07785 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D GJV52_09585 helix-hairpin-helix domain-containing protein K02237 comEA; competence protein ComEA
D GJV52_09825 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D GJV52_12870 AAA family ATPase K12055 K12055; chromosome partitioning related protein ParA
D GJV52_12545 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D GJV52_12525 traD; type IV conjugative transfer system coupling protein TraD K12071 traD; conjugal transfer pilus assembly protein TraD
D GJV52_08220 thioredoxin fold domain-containing protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D GJV52_12540 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D GJV52_02600 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D GJV52_07825 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D GJV52_02380 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D GJV52_06360 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D GJV52_02370 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D GJV52_07080 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D GJV52_06540 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D GJV52_04510 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D GJV52_05960 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D GJV52_02385 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D GJV52_07435 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D GJV52_02755 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D GJV52_02760 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D GJV52_02765 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:nbl02042]
D GJV52_12475 zonular occludens toxin family protein K10954 zot; zona occludens toxin
D GJV52_01890 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:nbl02022]
D GJV52_00560 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D GJV52_00555 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D GJV52_02785 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D GJV52_02780 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D GJV52_08965 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJV52_10065 HAMP domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D GJV52_08960 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D GJV52_10060 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D GJV52_06300 HAMP domain-containing protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D GJV52_06305 response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D GJV52_07265 sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D GJV52_07260 response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
C 02035 Bacterial motility proteins [BR:nbl02035]
D GJV52_11935 transporter substrate-binding domain-containing protein K02424 tcyA; L-cystine transport system substrate-binding protein
D GJV52_07260 response regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D GJV52_07265 sensor histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D GJV52_06145 PilT/PilU family type 4a pilus ATPase K02669 pilT; twitching motility protein PilT
D GJV52_06140 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D GJV52_07695 prepilin-type N-terminal cleavage/methylation domain-containing protein K02650 pilA; type IV pilus assembly protein PilA
D GJV52_03365 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D GJV52_03360 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D GJV52_03355 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D GJV52_10600 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D GJV52_08160 pilQ; type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D GJV52_08165 pilin assembly protein K02665 pilP; type IV pilus assembly protein PilP
D GJV52_08170 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D GJV52_08175 pilus assembly protein PilP K02663 pilN; type IV pilus assembly protein PilN
D GJV52_08180 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D GJV52_01380 pilus assembly protein K02676 pilZ; type IV pilus assembly protein PilZ
D GJV52_10230 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D GJV52_10225 pilus assembly protein PilW K02672 pilW; type IV pilus assembly protein PilW
D GJV52_10210 pilus assembly protein PilX K02673 pilX; type IV pilus assembly protein PilX
D GJV52_04020 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D GJV52_02485 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D GJV52_10205 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:nbl04812]
D GJV52_10510 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GJV52_03640 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GJV52_03645 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D GJV52_04875 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D GJV52_04880 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D GJV52_04885 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D GJV52_06640 AAA family ATPase K03496 parA; chromosome partitioning protein
D GJV52_04435 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:nbl04147]
D GJV52_12235 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D GJV52_03480 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJV52_05345 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D GJV52_05730 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D GJV52_06215 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D GJV52_03380 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D GJV52_03065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D GJV52_04245 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_08785 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D GJV52_12230 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D GJV52_06350 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJV52_06430 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D GJV52_02750 HIT domain-containing protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D GJV52_01425 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_13035 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D GJV52_01310 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D GJV52_08950 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D GJV52_01585 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D GJV52_04595 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D GJV52_09950 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D GJV52_09845 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D GJV52_08330 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D GJV52_09985 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D GJV52_02900 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D GJV52_09360 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11200 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_11570 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D GJV52_05300 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D GJV52_08765 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D GJV52_07075 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D GJV52_03805 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D GJV52_03570 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:nbl02048]
D GJV52_08275 cas1c; type I-C CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D GJV52_08280 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D GJV52_08250 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D GJV52_08270 cas4; CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D GJV52_08260 cas8c; type I-C CRISPR-associated protein Cas8c/Csd1 K19117 csd1; CRISPR-associated protein Csd1
D GJV52_08265 cas7c; type I-C CRISPR-associated protein Cas7/Csd2 K19118 csd2; CRISPR-associated protein Csd2
D GJV52_08255 cas5c; type I-C CRISPR-associated protein Cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D GJV52_04065 HsdR family type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D GJV52_04055 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D GJV52_04045 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D GJV52_04765 restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D GJV52_05645 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D GJV52_12965 Dam family site-specific DNA-(adenine-N6)-methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GJV52_00160 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_03505 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_06730 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07020 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_07030 dcm; DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D GJV52_09550 DEAD/DEAH box helicase K01156 res; type III restriction enzyme [EC:3.1.21.5]
D GJV52_09450 methyltransferase domain-containing protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D GJV52_08050 NERD domain-containing protein K07448 mrr; restriction system protein
D GJV52_02085 PbsX family transcriptional regulator K07172 mazE; antitoxin MazE
D GJV52_12565 toxin YhaV K19155 yhaV; toxin YhaV [EC:3.1.-.-]
D GJV52_12570 hypothetical protein K19156 prlF; antitoxin PrlF
D GJV52_03460 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family K06218 relE; mRNA interferase RelE/StbE
D GJV52_03455 hypothetical protein K18923 stbD; antitoxin StbD
D GJV52_02100 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D GJV52_12580 Txe/YoeB family addiction module toxin K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D GJV52_02095 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D GJV52_12585 type II toxin-antitoxin system prevent-host-death family antitoxin K19159 yefM; antitoxin YefM
D GJV52_07170 hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D GJV52_09730 excinuclease ABC subunit A K07334 higB-1; toxin HigB-1
D GJV52_07175 helix-turn-helix domain-containing protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D GJV52_09735 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1
D GJV52_12530 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D GJV52_12535 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB
D GJV52_07100 DUF4411 family protein K07062 fitB; toxin FitB [EC:3.1.-.-]
D GJV52_03640 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D GJV52_10510 MreB/Mrl family cell shape determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D GJV52_07270 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D GJV52_08535 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D GJV52_05715 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D GJV52_09335 succinate dehydrogenase assembly factor 2 family protein K09159 cptB; antitoxin CptB
D GJV52_10015 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D GJV52_09805 dndC; DNA phosphorothioation system sulfurtransferase DndC K19170 dndC; DNA sulfur modification protein DndC
D GJV52_09815 AAA family ATPase K19171 dndD; DNA sulfur modification protein DndD
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:nbl01504]
D GJV52_06015 PSE family carbenicillin-hydrolyzing class A beta-lactamase CARB-2 K18795 blaCARB-1; beta-lactamase class A CARB-1, PSE family [EC:3.5.2.6]
D GJV52_05995 sat2; streptothricin N-acetyltransferase Sat2 K19063 sat2; streptothricin acetyltransferase [EC:2.3.-.-]
D GJV52_09460 sat4; streptothricin N-acetyltransferase Sat4 K19273 sat4; streptothricin acetyltransferase [EC:2.3.-.-]
D GJV52_06000 aadB; aminoglycoside nucleotidyltransferase ANT(2'')-Ia K17881 aadB; aminoglycoside 2''-adenylyltransferase [EC:2.7.7.46]
D GJV52_06020 aadA; AadA family aminoglycoside 3''-O-nucleotidyltransferase K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47]
D GJV52_09455 aminoglycoside nucleotidyltransferase ANT(6)-Ia K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D GJV52_09465 aph(3')-IIIa; aminoglycoside O-phosphotransferase APH(3')-IIIa K19299 aph3-III; aminoglycoside 3'-phosphotransferase III [EC:2.7.1.95]
D GJV52_02525 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D GJV52_02510 catA; type A chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D GJV52_06005 type B-2 chloramphenicol O-acetyltransferase CatB2 K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D GJV52_03700 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D GJV52_05975 hypothetical protein K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D GJV52_07965 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D GJV52_07970 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D GJV52_07975 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D GJV52_09395 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D GJV52_11095 MerR family transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D GJV52_12125 MFS transporter K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:nbl00536]
D GJV52_02155 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin
D GJV52_12645 hypothetical protein K15125 fhaB; filamentous hemagglutinin
D GJV52_12675 filamentous hemagglutinin N-terminal domain-containing protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:nbl03100]
D GJV52_06185 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_07770 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_04490 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_03740 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_09570 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D GJV52_01850 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_09010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_01900 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_04005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_07730 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D GJV52_09275 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GJV52_07675 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D GJV52_07340 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJV52_07330 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJV52_09205 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D GJV52_01275 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D GJV52_10175 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GJV52_10180 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GJV52_10170 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D GJV52_09015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJV52_01895 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJV52_08710 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D GJV52_01265 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_01270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_01260 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_01255 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_06340 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D GJV52_04000 tRNA-His K14226 tRNA-His; tRNA His
D GJV52_06180 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJV52_07765 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJV52_09565 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJV52_04495 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D GJV52_07085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_09225 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_11690 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_01280 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_02265 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_11695 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_12910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D GJV52_04150 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GJV52_04905 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D GJV52_06610 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJV52_03735 tRNA-Met K14230 tRNA-Met; tRNA Met
D GJV52_02040 tRNA-Ile K14230 tRNA-Met; tRNA Met
D GJV52_03370 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D GJV52_00970 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJV52_04010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJV52_03995 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D GJV52_11700 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJV52_10745 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJV52_00680 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJV52_00685 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D GJV52_11920 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJV52_11915 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJV52_06345 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D GJV52_06355 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D GJV52_06335 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D GJV52_07345 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJV52_09210 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJV52_07325 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJV52_07335 tRNA-Val K14237 tRNA-Val; tRNA Val
D GJV52_09560 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_04500 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_06175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_07760 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D GJV52_09575 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_06190 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_07775 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_04485 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D GJV52_06195 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_09580 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_07780 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_04480 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D GJV52_09680 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D GJV52_05120 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D GJV52_10910 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D GJV52_00145 SDR family NAD(P)-dependent oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D GJV52_08515 FAD-binding protein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D GJV52_01975 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D GJV52_05850 c-type cytochrome K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D GJV52_07480 msrAB; bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D GJV52_03575 c-type cytochrome K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D GJV52_10660 redoxin domain-containing protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GJV52_11625 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D GJV52_00570 Ohr family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D GJV52_12980 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D GJV52_00370 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D GJV52_02030 cupin domain-containing protein K07155 qodI; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D GJV52_00095 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D GJV52_09745 NAD(P)-binding protein K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D GJV52_12105 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D GJV52_12940 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D GJV52_05705 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D GJV52_11110 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D GJV52_00620 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D GJV52_10055 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D GJV52_07065 methyltransferase domain-containing protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D GJV52_08405 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D GJV52_08595 tehB; SAM-dependent methyltransferase TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D GJV52_04285 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D GJV52_02545 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D GJV52_04255 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D GJV52_00215 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D GJV52_02200 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D GJV52_02325 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D GJV52_08625 ppsR; pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D GJV52_03915 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D GJV52_02965 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D GJV52_00035 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D GJV52_03390 prolyl oligopeptidase family serine peptidase K23722 pfeE; iron(III)-enterobactin esterase [EC:3.1.1.108]
D GJV52_03135 esterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D GJV52_03270 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D GJV52_01375 YchF/TatD family DNA exonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GJV52_01815 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D GJV52_00740 glycoside hydrolase family protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D GJV52_12365 glycoside hydrolase family protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D GJV52_06275 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D GJV52_07495 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D GJV52_07420 septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D GJV52_11050 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D GJV52_10835 NAD(P)H-hydrate epimerase K17759 NAXE; NAD(P)H-hydrate epimerase [EC:5.1.99.6]
D GJV52_02865 AMP-binding protein K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D GJV52_10815 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D GJV52_07180 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D GJV52_03470 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D GJV52_02290 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D GJV52_02295 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D GJV52_02300 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D GJV52_02305 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D GJV52_02310 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D GJV52_02315 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D GJV52_09715 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D GJV52_12150 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D GJV52_12140 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D GJV52_12145 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D GJV52_09265 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D GJV52_12085 2Fe-2S ferredoxin-like protein K11107 yfaE; ferredoxin
D GJV52_10010 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D GJV52_05305 EtfB protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D GJV52_10865 VOC family protein K08234 yaeR; glyoxylase I family protein
D GJV52_06150 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D GJV52_02990 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
D GJV52_02985 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
D GJV52_07370 hypothetical protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D GJV52_09930 heme biosynthesis protein HemY K02498 hemY; HemY protein
D GJV52_04350 phosphotransferase K03688 ubiB; ubiquinone biosynthesis protein
D GJV52_07615 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D GJV52_03040 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D GJV52_08005 Sterol-binding domain protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D GJV52_07280 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D GJV52_00375 hypothetical protein K15977 K15977; putative oxidoreductase
D GJV52_04520 DoxX family membrane protein K15977 K15977; putative oxidoreductase
D GJV52_05270 DoxX family membrane protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D GJV52_00405 cold-shock protein K03704 cspA; cold shock protein
D GJV52_07035 S1 RNA-binding domain-containing protein K06959 tex; protein Tex
C 99974 Translation
D GJV52_12055 ATP-binding cassette domain-containing protein K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D GJV52_00400 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D GJV52_09865 trigger factor K03545 tig; trigger factor
D GJV52_09260 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D GJV52_00420 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D GJV52_03035 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D GJV52_01945 OsmC family protein K07397 yhfA; putative redox protein
D GJV52_03510 OsmC family peroxiredoxin K07397 yhfA; putative redox protein
D GJV52_08200 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D GJV52_10900 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D GJV52_04220 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D GJV52_04585 YraN family protein K07460 yraN; putative endonuclease
D GJV52_04455 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D GJV52_06310 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D GJV52_12090 AAA family ATPase K07478 ycaJ; putative ATPase
D GJV52_07155 DNA primase K06919 K06919; putative DNA primase/helicase
D GJV52_07515 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D GJV52_01990 IS5 family transposase K07481 K07481; transposase, IS5 family
D GJV52_03970 IS5 family transposase K07481 K07481; transposase, IS5 family
D GJV52_04665 IS5 family transposase K07481 K07481; transposase, IS5 family
D GJV52_05085 IS5 family transposase K07481 K07481; transposase, IS5 family
D GJV52_06170 IS5 family transposase K07481 K07481; transposase, IS5 family
D GJV52_00340 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_01075 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_01645 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_02090 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_02235 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_02345 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_03000 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_03020 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_03875 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_04675 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_06265 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_06660 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_07045 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_08055 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_08550 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_08930 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_09060 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_09755 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_11015 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_11085 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_11165 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_11520 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_11830 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_12990 IS30 family transposase K07482 K07482; transposase, IS30 family
D GJV52_04380 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GJV52_05340 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GJV52_08895 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GJV52_10675 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GJV52_10805 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GJV52_13005 helix-turn-helix domain-containing protein K07483 K07483; transposase
D GJV52_12470 transposase K07486 K07486; transposase
D GJV52_01750 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_01860 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_01960 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_03960 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_05140 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_06205 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_09250 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_10375 IS1595 family transposase K07488 K07488; transposase
D GJV52_12015 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_12515 IS1595-like element ISNme3 family transposase K07488 K07488; transposase
D GJV52_00860 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_00955 transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_01315 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_02005 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_02140 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_02925 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_03215 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_03830 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_04690 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_05785 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_06925 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_07115 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_07160 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_07230 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_07665 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_07690 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_07815 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_07915 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_10045 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_10185 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_10270 transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_10930 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_12335 tnpA; IS200/IS605 family transposase K07491 rayT; REP-associated tyrosine transposase
D GJV52_00855 transposase K07496 K07496; putative transposase
D GJV52_01320 transposase K07496 K07496; putative transposase
D GJV52_02010 transposase K07496 K07496; putative transposase
D GJV52_02145 transposase K07496 K07496; putative transposase
D GJV52_02920 transposase K07496 K07496; putative transposase
D GJV52_03210 transposase K07496 K07496; putative transposase
D GJV52_03825 transposase K07496 K07496; putative transposase
D GJV52_04685 transposase K07496 K07496; putative transposase
D GJV52_05790 transposase K07496 K07496; putative transposase
D GJV52_06930 transposase K07496 K07496; putative transposase
D GJV52_07110 transposase K07496 K07496; putative transposase
D GJV52_07165 transposase K07496 K07496; putative transposase
D GJV52_07235 transposase K07496 K07496; putative transposase
D GJV52_07670 transposase K07496 K07496; putative transposase
D GJV52_07685 transposase K07496 K07496; putative transposase
D GJV52_07820 transposase K07496 K07496; putative transposase
D GJV52_07910 transposase K07496 K07496; putative transposase
D GJV52_10050 transposase K07496 K07496; putative transposase
D GJV52_10190 transposase K07496 K07496; putative transposase
D GJV52_10935 transposase K07496 K07496; putative transposase
D GJV52_12340 transposase K07496 K07496; putative transposase
D GJV52_01065 IS3 family transposase K07497 K07497; putative transposase
D GJV52_04385 IS3 family transposase K07497 K07497; putative transposase
D GJV52_05335 IS3 family transposase K07497 K07497; putative transposase
D GJV52_08885 IS3 family transposase K07497 K07497; putative transposase
D GJV52_08890 IS3 family transposase K07497 K07497; putative transposase
D GJV52_10680 IS3 family transposase K07497 K07497; putative transposase
D GJV52_10800 IS3 family transposase K07497 K07497; putative transposase
D GJV52_11265 DDE-type integrase/transposase/recombinase K07497 K07497; putative transposase
D GJV52_13000 IS3 family transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D GJV52_11575 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D GJV52_00500 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D GJV52_04640 efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D GJV52_07905 hypothetical protein K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D GJV52_02895 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D GJV52_03275 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family
D GJV52_02195 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D GJV52_09880 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D GJV52_01885 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D GJV52_04895 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D GJV52_08485 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D GJV52_11835 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D GJV52_06855 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D GJV52_11045 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D GJV52_00175 septation protein A K06190 ispZ; intracellular septation protein
D GJV52_11705 iron-sulfur cluster repair protein DnrN K07322 ytfE; regulator of cell morphogenesis and NO signaling
D GJV52_09540 recombinase K06400 spoIVCA; site-specific DNA recombinase
D GJV52_10925 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D GJV52_06995 carbon starvation protein A K06200 cstA; carbon starvation protein
D GJV52_08305 carbon starvation protein A K06200 cstA; carbon starvation protein
D GJV52_11030 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D GJV52_01625 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D GJV52_08880 AAA family ATPase K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D GJV52_01150 AAA family ATPase K07175 phoH2; PhoH-like ATPase
D GJV52_01670 cyclic nucleotide-binding domain-containing protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D GJV52_01790 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D GJV52_10160 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D GJV52_06760 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D GJV52_04785 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D GJV52_12035 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D GJV52_08690 peptidoglycan DD-metalloendopeptidase family protein K12943 ygeR; lipoprotein YgeR
D GJV52_06890 capsule biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D GJV52_06895 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D GJV52_03855 DUF560 domain-containing protein K07280 K07280; outer membrane protein
D GJV52_09105 DUF560 domain-containing protein K07280 K07280; outer membrane protein
D GJV52_03155 TspA protein K07288 tspA; uncharacterized membrane protein
D GJV52_12050 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D GJV52_10605 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D GJV52_01120 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D GJV52_12995 bacterioferritin K02192 bfd; bacterioferritin-associated ferredoxin
D GJV52_10975 divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D GJV52_08480 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D GJV52_03925 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D GJV52_02220 nosD; nitrous oxide reductase family maturation protein NosD K07218 nosD; nitrous oxidase accessory protein
D GJV52_08875 hemin-degrading factor K07225 hmuS; putative hemin transport protein
D GJV52_07525 NnrS protein K07234 K07234; uncharacterized protein involved in response to NO
D GJV52_02205 copper-binding protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D GJV52_01530 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D GJV52_02015 pqiB; intermembrane transport protein PqiB K06192 pqiB; paraquat-inducible protein B
D GJV52_12115 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D GJV52_12450 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D GJV52_03680 globin K06886 glbN; hemoglobin
D GJV52_05165 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D GJV52_11995 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D GJV52_06090 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D GJV52_08090 HAD-IA family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D GJV52_07625 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D GJV52_08040 YihY family inner membrane protein K07058 K07058; membrane protein
D GJV52_08685 membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA
D GJV52_11855 LemA family protein K03744 lemA; LemA protein
D GJV52_03940 hypothetical protein K03745 slyX; SlyX protein
D GJV52_06315 DUF494 family protein K03747 smg; Smg protein
D GJV52_10940 CreA protein K05805 creA; CreA protein
D GJV52_02020 PqiA/YebS family transporter subunit K03808 pqiA; paraquat-inducible protein A
D GJV52_09375 DUF883 family protein K05594 elaB; ElaB protein
D GJV52_11155 DUF2238 domain-containing protein K08984 yjdF; putative membrane protein
D GJV52_11960 DUF350 domain-containing protein K08989 K08989; putative membrane protein
D GJV52_03465 YchJ family protein K09858 K09858; SEC-C motif domain protein
D GJV52_01085 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D GJV52_00960 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein
D GJV52_11860 TPM domain-containing protein K06872 K06872; uncharacterized protein
D GJV52_11135 alpha/beta fold hydrolase K06889 K06889; uncharacterized protein
D GJV52_00785 phage baseplate protein K06903 W; Bacteriophage baseplate protein W
D GJV52_05610 phage baseplate protein K06903 W; Bacteriophage baseplate protein W
D GJV52_00840 late control protein K06905 D; Bacteriophage probable baseplate hub protein
D GJV52_05600 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein
D GJV52_00835 hypothetical protein K06906 gpU; phage tail protein
D GJV52_00815 phage tail protein K06907 FI; Bacteriophage tail sheath protein
D GJV52_05560 phage tail protein K06907 FI; Bacteriophage tail sheath protein
D GJV52_00820 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D GJV52_05565 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D GJV52_12425 DUF815 domain-containing protein K06923 K06923; uncharacterized protein
D GJV52_08445 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D GJV52_10550 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D GJV52_03195 peptidase C39 K06992 K06992; uncharacterized protein
D GJV52_11905 alpha/beta fold hydrolase K07018 K07018; uncharacterized protein
D GJV52_04610 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D GJV52_04030 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein
D GJV52_00235 UPF0149 family protein K07039 K07039; uncharacterized protein
D GJV52_09970 hypothetical protein K07054 K07054; uncharacterized protein
D GJV52_05065 nucleotidyltransferase K07075 K07075; uncharacterized protein
D GJV52_04515 nitroreductase family protein K07078 K07078; uncharacterized protein
D GJV52_01350 TSUP family transporter K07090 K07090; uncharacterized protein
D GJV52_01985 TSUP family transporter K07090 K07090; uncharacterized protein
D GJV52_02735 TSUP family transporter K07090 K07090; uncharacterized protein
D GJV52_08575 DUF839 domain-containing protein K07093 K07093; uncharacterized protein
D GJV52_07405 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D GJV52_06700 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D GJV52_08850 sel1 repeat family protein K07126 K07126; uncharacterized protein
D GJV52_11720 sel1 repeat family protein K07126 K07126; uncharacterized protein
D GJV52_03110 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D GJV52_04445 DUF554 family protein K07150 K07150; uncharacterized protein
D GJV52_07440 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D GJV52_08920 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D GJV52_01620 DUF711 family protein K09157 K09157; uncharacterized protein
D GJV52_12405 DUF493 family protein K09158 K09158; uncharacterized protein
D GJV52_04985 hypothetical protein K09190 K09190; uncharacterized protein
D GJV52_01370 DUF333 domain-containing protein K09712 K09712; uncharacterized protein
D GJV52_03160 YciI family protein K09780 K09780; uncharacterized protein
D GJV52_02540 DUF808 family protein K09781 K09781; uncharacterized protein
D GJV52_02695 DUF454 family protein K09790 K09790; uncharacterized protein
D GJV52_01330 Trm112 family protein K09791 K09791; uncharacterized protein
D GJV52_01355 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D GJV52_00230 DUF456 family protein K09793 K09793; uncharacterized protein
D GJV52_11825 DUF465 domain-containing protein K09794 K09794; uncharacterized protein
D GJV52_10405 RnfH family protein K09801 K09801; uncharacterized protein
D GJV52_10495 DUF535 domain-containing protein K09824 virK; uncharacterized protein
D GJV52_02330 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D GJV52_02000 hypothetical protein K09857 K09857; uncharacterized protein
D GJV52_00675 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D GJV52_03345 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D GJV52_10290 DUF1040 family protein K09896 K09896; uncharacterized protein
D GJV52_01235 hypothetical protein K09926 K09926; uncharacterized protein
D GJV52_01240 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D GJV52_05255 DUF2063 domain-containing protein K09929 K09929; uncharacterized protein
D GJV52_05260 DUF692 family protein K09930 K09930; uncharacterized protein
D GJV52_02690 DUF1415 family protein K09941 K09941; uncharacterized protein
D GJV52_04915 hypothetical protein K09943 K09943; uncharacterized protein
D GJV52_11620 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein
D GJV52_03320 TraB/GumN family protein K09973 K09973; uncharacterized protein
D GJV52_10780 DUF1853 family protein K09977 K09977; uncharacterized protein
D GJV52_04450 hypothetical protein K09979 K09979; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: September 20, 2024