+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Sciurus carolinensis (gray squirrel)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        124980148 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        124994956 LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2-like	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        124967224 DNA-directed RNA polymerase II subunit RPB3 isoform X1	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        124969894 DNA-directed RNA polymerase II subunit RPB11-a	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        124980213 DNA-directed RNA polymerase II subunit RPB4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        124958944 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        124966423 DNA-directed RNA polymerase II subunit RPB9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        124975988 DNA-directed RNA polymerase II subunit GRINL1A-like	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        124968707 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        124983940 DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        124992527 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124960490 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124960491 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124984360 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124978319 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124980904 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124965584 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124958283 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        124963104 TFIIA-alpha and beta-like factor isoform X1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        124972577 transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        124991587 transcription initiation factor IIA subunit 2-like	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
E        124978219 transcription initiation factor IIA subunit 2	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        124977513 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        124988172 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124988286 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124977741 TATA box-binding protein-like 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124971717 transcription initiation factor TFIID subunit 1 isoform X1	K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1] 
E        124961826 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        124961686 transcription initiation factor TFIID subunit 3 isoform X1	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        124965192 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4B-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        124976011 transcription initiation factor TFIID subunit 4-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        124985921 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        124961851 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        124958568 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        124970190 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        124986935 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        124971566 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        124988185 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 8-like	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        124986806 transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        124990834 transcription initiation factor TFIID subunit 9B-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        124972103 transcription initiation factor TFIID subunit 9B isoform X1	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        124958329 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        124989777 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        124981554 transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        124960376 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        124969591 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        124965433 transcription initiation factor TFIID subunit 13	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        124966534 transcription initiation factor TFIID subunit 13-like	K03127 TAF13; transcription initiation factor TFIID subunit 13 
E        124980003 TATA-binding protein-associated factor 2N	K14651 TAF15; transcription initiation factor TFIID subunit 15 
D      TFIIE
E        124992872 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        124982167 transcription initiation factor IIE subunit beta isoform X1	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        124968765 general transcription factor IIF subunit 1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        124963152 general transcription factor IIF subunit 1-like	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        124984945 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        124958314 general transcription factor IIH subunit 1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        124986823 general transcription factor IIH subunit 2 isoform X1	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        124991643 LOW QUALITY PROTEIN: general transcription factor IIH subunit 2-like	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        124991851 general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        124989533 general transcription factor IIH subunit 4 isoform X1	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        124980937 general transcription and DNA repair factor IIH helicase subunit XPB isoform X1	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        124966674 general transcription and DNA repair factor IIH helicase subunit XPD isoform X1	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        124989071 general transcription factor IIH subunit 5 isoform X1	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        124987092 cyclin-dependent kinase 7 isoform X1	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        124987415 LOW QUALITY PROTEIN: CDK-activating kinase assembly factor MAT1-like	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        124976935 CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        124987004 cyclin-H	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        124977969 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 6-like	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        124983986 mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        124979616 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        124960447 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        124981610 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        124958549 mediator of RNA polymerase II transcription subunit 19 isoform X1	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        124988187 mediator of RNA polymerase II transcription subunit 20 isoform X1	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        124964429 mediator of RNA polymerase II transcription subunit 22	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        124986322 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        124986431 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        124995040 mediator of RNA polymerase II transcription subunit 28	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        124961982 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        124971324 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        124981918 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        124982984 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        124983704 mediator of RNA polymerase II transcription subunit 28-like	K15141 MED28; mediator of RNA polymerase II transcription subunit 28 
E        124966306 mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        124992834 mediator of RNA polymerase II transcription subunit 30	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        124980292 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 1-like	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        124984927 mediator of RNA polymerase II transcription subunit 4	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        124987596 mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        124981204 mediator of RNA polymerase II transcription subunit 9	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        124987016 mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        124975866 mediator of RNA polymerase II transcription subunit 21-like	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        124983349 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        124978994 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        124971845 mediator of RNA polymerase II transcription subunit 14 isoform X1	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        124990401 mediator of RNA polymerase II transcription subunit 15 isoform X1	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        124968605 mediator of RNA polymerase II transcription subunit 16	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        124988568 cyclin-dependent kinase 19 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        124985073 cyclin-dependent kinase 8 isoform X1	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        124958776 cyclin-C-like	K15161 CCNC; cyclin-C 
E        124988382 cyclin-C isoform X1	K15161 CCNC; cyclin-C 
E        124992720 mediator of RNA polymerase II transcription subunit 12-like protein isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        124972137 mediator of RNA polymerase II transcription subunit 12	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        124990256 mediator of RNA polymerase II transcription subunit 13-like isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
E        124979022 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        124988179 LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23-like	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        124981428 mediator of RNA polymerase II transcription subunit 24 isoform X1	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        124967117 mediator of RNA polymerase II transcription subunit 25 isoform X1	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        124968474 mediator of RNA polymerase II transcription subunit 26	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        124964420 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        124968608 LOW QUALITY PROTEIN: histone acetyltransferase KAT2B-like	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        124979680 histone acetyltransferase KAT2A isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        124969912 LOW QUALITY PROTEIN: transformation/transcription domain-associated protein-like	K08874 TRRAP; transformation/transcription domain-associated protein 
E        124989692 transcription initiation protein SPT3 homolog isoform X1	K11313 SUPT3H; transcription initiation protein SPT3 
E        124972497 transcription initiation protein SPT3 homolog	K11313 SUPT3H; transcription initiation protein SPT3 
E        124980207 transcriptional adapter 2-alpha isoform X1	K11314 TADA2A; transcriptional adapter 2-alpha 
E        124971120 transcriptional adapter 3	K11315 TADA3; transcriptional adapter 3 
E        124962393 transcriptional adapter 1 isoform X1	K11317 TADA1; transcriptional adapter 1 
E        124961826 transcription initiation factor TFIID subunit 2 isoform X1	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        124965192 LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4B-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        124976011 transcription initiation factor TFIID subunit 4-like	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        124985921 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        124961851 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        124958568 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        124970190 transcription initiation factor TFIID subunit 6	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        124986935 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        124971566 transcription initiation factor TFIID subunit 7-like	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        124986806 transcription initiation factor TFIID subunit 9	K14535 TAF9; transcription initiation factor TFIID subunit 9 
E        124990834 transcription initiation factor TFIID subunit 9B-like	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        124972103 transcription initiation factor TFIID subunit 9B isoform X1	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        124958329 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        124981554 transcription initiation factor TFIID subunit 12 isoform X1	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        124981045 ataxin-7-like protein 3 isoform X1	K11363 SGF11; SAGA-associated factor 11 
E        124969778 SAGA-associated factor 29	K11364 SGF29; SAGA-associated factor 29 
E        124963021 STAGA complex 65 subunit gamma	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        124990447 ataxin-7-like protein 2	K11318 ATXN7; ataxin-7 
E        124991951 ataxin-7-like protein 1 isoform X1	K11318 ATXN7; ataxin-7 
E        124968295 LOW QUALITY PROTEIN: ataxin-7-like	K11318 ATXN7; ataxin-7 
E        124986601 chromodomain-helicase-DNA-binding protein 1 isoform X1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        124983918 transcription and mRNA export factor ENY2 isoform X1	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        124979945 ubiquitin carboxyl-terminal hydrolase 22 isoform X1	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        124971450 ubiquitin carboxyl-terminal hydrolase 27	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        124971916 ubiquitin carboxyl-terminal hydrolase 51	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        124967152 splicing factor 3B subunit 3	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        124967856 LOW QUALITY PROTEIN: transcription activator BRG1-like	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        124964614 probable global transcription activator SNF2L2 isoform X1	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        124990619 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        124969407 SWI/SNF complex subunit SMARCC1 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        124981955 SWI/SNF complex subunit SMARCC2 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        124991124 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        124979789 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        124982024 LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        124980593 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        124958454 actin, muscle-like	K05692 ACTB_G1; actin beta/gamma 1 
E        124976675 actin, cytoplasmic 2-like	K05692 ACTB_G1; actin beta/gamma 1 
E        124984855 actin, cytoplasmic 1-like	K05692 ACTB_G1; actin beta/gamma 1 
E        124969779 actin, cytoplasmic 1	K05692 ACTB_G1; actin beta/gamma 1 
E        124979796 actin, cytoplasmic 2	K05692 ACTB_G1; actin beta/gamma 1 
E        124971792 actin, cytoplasmic 1-like	K05692 ACTB_G1; actin beta/gamma 1 
E        124982432 actin, cytoplasmic 1-like	K05692 ACTB_G1; actin beta/gamma 1 
E        124992888 actin-like protein 6A isoform X1	K11340 ACTL6A; actin-like protein 6A 
E        124969985 actin-like protein 6B isoform X1	K11652 ACTL6B; actin-like protein 6B 
E        124987963 AT-rich interactive domain-containing protein 1B isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        124982510 AT-rich interactive domain-containing protein 1A isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        124982508 AT-rich interactive domain-containing protein 2	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        124968365 protein polybromo-1 isoform X1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        124990619 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        124969289 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        124979489 activated RNA polymerase II transcriptional coactivator p15-like	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        124987118 activated RNA polymerase II transcriptional coactivator p15	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        124984832 cell division cycle and apoptosis regulator protein 1 isoform X1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
E        124982893 LOW QUALITY PROTEIN: calcium-binding and coiled-coil domain-containing protein 1-like	K25828 CALCOCO1; calcium-binding and coiled-coil domain-containing protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        124986208 transcription elongation factor A protein 3	K03145 TFIIS; transcription elongation factor S-II 
E        124958308 transcription elongation factor A protein 1 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        124976863 transcription elongation factor A protein 2 isoform X1	K03145 TFIIS; transcription elongation factor S-II 
E        124969501 LOW QUALITY PROTEIN: transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        124980659 transcription elongation factor SPT4-A	K15171 SUPT4H1; transcription elongation factor SPT4 
E        124967231 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        124979580 transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        124958101 transcription termination factor 2-like isoform X1	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        124958544 pre-mRNA cleavage complex 2 protein Pcf11 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        124985742 cleavage and polyadenylation specificity factor subunit 1 isoform X1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        124963679 cleavage and polyadenylation specificity factor subunit 3 isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        124970005 cleavage and polyadenylation specificity factor subunit 4 isoform X1	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        124991738 serine/threonine-protein phosphatase PP1-gamma catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        124960013 serine/threonine-protein phosphatase PP1-alpha catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        124963007 serine/threonine-protein phosphatase PP1-beta catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        124966888 symplekin	K06100 SYMPK; symplekin 
E        124971716 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        124981185 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        124972656 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        124976899 5'-3' exoribonuclease 2 isoform X1	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        124988996 decapping and exoribonuclease protein isoform X1	K14845 RAI1; RAT1-interacting protein 
E        124977975 regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        124965570 LOW QUALITY PROTEIN: regulation of nuclear pre-mRNA domain-containing protein 1A-like	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        124982692 LOW QUALITY PROTEIN: splicing factor, proline- and glutamine-rich-like	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        124983045 splicing factor, proline- and glutamine-rich isoform X1	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        124988157 SR-related and CTD-associated factor 8 isoform X1	K13191 RBM16; RNA-binding protein 16 
E        124992481 SR-related and CTD-associated factor 4 isoform X1	K13167 SCAF4; SR-related and CTD-associated factor 4 
E        124964042 probable helicase senataxin isoform X1	K10706 SETX; ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] 
E        124967849 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        124966305 RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        124961675 parafibromin isoform X1	K15175 CDC73; parafibromin 
E        124960395 RNA polymerase-associated protein CTR9 homolog isoform X1	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        124978096 RNA polymerase-associated protein LEO1 isoform X1	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        124977951 RNA polymerase-associated protein RTF1 homolog isoform X1	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        124995045 negative elongation factor A isoform X1	K15179 WHSC2; negative elongation factor A 
E        124964887 LOW QUALITY PROTEIN: negative elongation factor B-like	K15180 COBRA1; negative elongation factor B 
E        124976900 negative elongation factor D isoform X1	K15181 TH1L; negative elongation factor C/D 
E        124989324 LOW QUALITY PROTEIN: negative elongation factor E-like	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        124986508 RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        124976849 RNA polymerase II elongation factor ELL3-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        124968991 LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        124971680 RNA polymerase II elongation factor ELL2-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        124994368 AF4/FMR2 family member 1 isoform X1	K15184 AFF1; AF4/FMR2 family member 1 
E        124986594 AF4/FMR2 family member 4 isoform X1	K15185 AFF4; AF4/FMR2 family member 4 
E        124993513 ELL-associated factor 2-like isoform X1	K15186 EAF; ELL-associated factor 
E        124968543 ELL-associated factor 1	K15186 EAF; ELL-associated factor 
E        124968597 protein ENL isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        124964329 protein AF-9 isoform X1	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        124979732 cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
E        124983777 cyclin-T1	K15188 CCNT; cyclin T 
E        124964451 cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        124986508 RNA polymerase II elongation factor ELL2	K15183 ELL; RNA polymerase II elongation factor ELL 
E        124976849 RNA polymerase II elongation factor ELL3-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        124968991 LOW QUALITY PROTEIN: RNA polymerase II elongation factor ELL-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        124971680 RNA polymerase II elongation factor ELL2-like	K15183 ELL; RNA polymerase II elongation factor ELL 
E        124986772 little elongation complex subunit 1-like isoform X1	K26143 ICE1; little elongation complex subunit 1 
E        124978213 little elongation complex subunit 2 isoform X1	K26144 ICE2; little elongation complex subunit 2 
E        124962767 zinc finger CCCH domain-containing protein 8-like isoform X1	K24388 ZC3H8; zinc finger CCCH domain-containing protein 8 
D      Brd4/P-TEFb complex
E        124969471 bromodomain-containing protein 4 isoform X1	K11722 BRD4; bromodomain-containing protein 4 
E        124979732 cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
E        124983777 cyclin-T1	K15188 CCNT; cyclin T 
E        124964451 cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        124981171 protein HEXIM2-like	K15189 HEXIM1_2; protein HEXIM1/2 
E        124981304 protein HEXIM1	K15189 HEXIM1_2; protein HEXIM1/2 
E        124970260 7SK snRNA methylphosphate capping enzyme	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        124994811 LOW QUALITY PROTEIN: la-related protein 7-like	K15191 LARP7; La-related protein 7 
E        124961816 LOW QUALITY PROTEIN: la-related protein 7-like	K15191 LARP7; La-related protein 7 
E        124979732 cyclin-T2 isoform X1	K15188 CCNT; cyclin T 
E        124983777 cyclin-T1	K15188 CCNT; cyclin T 
E        124964451 cyclin-dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
E        124981943 cell cycle and apoptosis regulator protein 2 isoform X1	K25816 CCAR2; cell cycle and apoptosis regulator protein 2 
E        124992548 DBIRD complex subunit ZNF326 isoform X1	K13204 ZNF326; zinc finger protein 326 
D      Others
E        124970387 general transcription factor II-I isoform X1	K03121 TFII-I; transcription initiation factor TFII-I 
E        124970243 general transcription factor II-I repeat domain-containing protein 1	K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 
E        124984708 LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        124963960 protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        124960737 dr1-associated corepressor	K21752 DRAP1; Dr1-associated corepressor 
E        124960077 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        124972138 AF4/FMR2 family member 2	K15194 AFF2; AF4/FMR2 family member 2 
E        124963365 AF4/FMR2 family member 3 isoform X1	K15195 AFF3; AF4/FMR2 family member 3 
E        124965282 RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X1	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        124968495 CTD small phosphatase-like protein isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        124980965 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        124982467 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        124980832 protein IWS1 homolog isoform X1	K17498 SPN1; transcription factor SPN1 
E        124967889 cysteine/serine-rich nuclear protein 1-like	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        124980388 cysteine/serine-rich nuclear protein 3	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        124982411 cysteine/serine-rich nuclear protein 2	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        124977934 LOW QUALITY PROTEIN: RNA polymerase II-associated protein 1-like	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        124959953 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        124983876 RNA polymerase II-associated protein 3 isoform X1	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        124977669 cyclin-K	K23326 CCNK; cyclin K 
E        124985709 LOW QUALITY PROTEIN: GPN-loop GTPase 1-like	K24104 GPN; GPN-loop GTPase 
E        124990374 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        124963022 GPN-loop GTPase 1 isoform X1	K24104 GPN; GPN-loop GTPase 
E        124980969 GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        124972064 transcription elongation factor A protein-like 1	K26769 TCEAL1; transcription elongation factor A protein-like 1 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        124985739 DNA-directed RNA polymerase III subunit RPC1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        124983783 DNA-directed RNA polymerase III subunit RPC2 isoform X1	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        124989500 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        124984826 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        124979074 DNA-directed RNA polymerase III subunit RPC3 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        124983008 DNA-directed RNA polymerase III subunit RPC4 isoform X1	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        124970430 DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        124978181 DNA-directed RNA polymerase III subunit RPC6 isoform X1	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        124987512 DNA-directed RNA polymerase III subunit RPC7	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        124979156 DNA-directed RNA polymerase III subunit RPC7-like isoform X1	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        124982095 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        124970466 DNA-directed RNA polymerase III subunit RPC9 isoform X1	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
E        124970528 DNA-directed RNA polymerase III subunit RPC10	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
E        124976109 DNA-directed RNA polymerase III subunit RPC10-like	K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11 
D      Pol I, II, III common subunits
E        124968707 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        124983940 DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        124992527 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124960490 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124960491 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124984360 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124978319 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124980904 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124965584 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124958283 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        124985535 transcription factor IIIA-like	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        124988172 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124988286 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124977741 TATA box-binding protein-like 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124970745 transcription factor IIIB 90 kDa subunit isoform X1	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        124982395 transcription factor IIIB 50 kDa subunit	K15197 BRF2; transcription factor IIIB 50 kDa subunit 
E        124987080 transcription factor TFIIIB component B'' homolog isoform X1	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        124969911 general transcription factor 3C polypeptide 1-like isoform X1	K15199 GTF3C1; general transcription factor 3C polypeptide 1 
E        124962785 general transcription factor 3C polypeptide 2	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        124980064 general transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
E        124964490 general transcription factor 3C polypeptide 4	K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48] 
E        124964977 general transcription factor 3C polypeptide 5 isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        124988678 general transcription factor 3C polypeptide 6-like	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        124964977 general transcription factor 3C polypeptide 5 isoform X1	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        124980064 general transcription factor 3C polypeptide 3	K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        124976959 snRNA-activating protein complex subunit 1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        124968602 snRNA-activating protein complex subunit 2-like isoform X1	K15209 SNAPC2; snRNA-activating protein complex subunit 2 
E        124964998 snRNA-activating protein complex subunit 3	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
E        124964847 snRNA-activating protein complex subunit 4-like isoform X1	K09453 SNAPC4; snRNA-activating protein complex subunit 4 
E        124993743 snRNA-activating protein complex subunit 5-like	K15211 SNAPC5; snRNA-activating protein complex subunit 5 
E        124977992 snRNA-activating protein complex subunit 5	K15211 SNAPC5; snRNA-activating protein complex subunit 5 
D      Octamer transcription factors
E        124967525 POU domain, class 2, transcription factor 2 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        124960553 POU domain, class 2, transcription factor 3 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        124961494 POU domain, class 2, transcription factor 1 isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
E        124988936 POU domain, class 5, transcription factor 1	K09367 POU5F; POU domain transcription factor, class 5 
D      Others
E        124989641 zinc finger protein 76 isoform X1	K20828 ZNF143_76; zinc finger protein 143/76 
E        124960342 LOW QUALITY PROTEIN: zinc finger protein 143-like	K20828 ZNF143_76; zinc finger protein 143/76 
E        124976452 repressor of RNA polymerase III transcription MAF1 homolog isoform X1	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        124963221 DNA-directed RNA polymerase I subunit RPA1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        124963609 DNA-directed RNA polymerase I subunit RPA2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        124989500 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        124984826 DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        124964555 DNA-directed RNA polymerase I subunit RPA49 isoform X1	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        124990811 DNA-directed RNA polymerase I subunit RPA43-like	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        124966448 DNA-directed RNA polymerase I subunit RPA34-like isoform X1	K25436 POLR1G; DNA-directed RNA polymerase I subunit RPA34 
E        124988193 DNA-directed RNA polymerase I subunit RPA12 isoform X1	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        124968707 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        124983940 DNA-directed RNA polymerases I, II, and III subunit RPABC2	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        124992527 DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124960490 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124960491 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like isoform X1	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        124984360 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124978319 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124980904 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124965584 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        124958283 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        124988172 TATA-box-binding protein isoform X1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124988286 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124977741 TATA box-binding protein-like 2	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        124962306 TATA box-binding protein-associated factor RNA polymerase I subunit A	K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A 
E        124963173 TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1	K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B 
E        124967427 TATA box-binding protein-associated factor, RNA polymerase I, subunit C-like isoform X1	K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C 
E        124958248 LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit D-like	K15215 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D 
C    Other transcription-related factors
D      UBF
E        124981044 nucleolar transcription factor 1 isoform X1	K09273 UBTF; upstream-binding transcription factor 
D      Transcription initiation factors
E        124970543 RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
D      Transcription elongation factors
E        124969501 LOW QUALITY PROTEIN: transcription elongation factor SPT4-A-like	K15171 SUPT4H1; transcription elongation factor SPT4 
E        124980659 transcription elongation factor SPT4-A	K15171 SUPT4H1; transcription elongation factor SPT4 
E        124967231 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        124994567 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
E        124983116 bromodomain adjacent to zinc finger domain protein 2A isoform X1	K15224 BAZ2A; bromodomain adjacent to zinc finger domain protein 2A 
D      CTDK-I complex
D      Transcription termination factors
E        124964416 transcription termination factor 1-like isoform X1	K15225 TTF1; transcription termination factor 1 
E        124980452 caveolae-associated protein 1	K19387 PTRF; polymerase I and transcript release factor 
D      Others
E        124966615 LOW QUALITY PROTEIN: nucleolar and coiled-body phosphoprotein 1-like	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
E        124985849 nucleolar and coiled-body phosphoprotein 1-like isoform X1	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        124977513 transcription initiation factor IIB	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        124992872 general transcription factor IIE subunit 1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
!
#<hr>
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#Last updated: April 9, 2024