+D	GENES	KO
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a> &nbsp; KEGG Orthology (KO) - Candidatus Nanohalobium constans </h2>
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A09100 Metabolism
B
B  09101 Carbohydrate metabolism
C    00010 Glycolysis / Gluconeogenesis [PATH:ncon00010]
D      LC1Nh_0180 glk; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_1157 glk2; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_0118 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      LC1Nh_0434 hypothetical protein	K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D      LC1Nh_0114 ADP-dependent phosphofructokinase/glucokinase	K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D      LC1Nh_0150 fbp; fructose-1,6-bisphosphatase I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      LC1Nh_0149 fbaB; fructose-bisphosphate aldolase, class I	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      LC1Nh_0115 tpiA; triosephosphate isomerase (TIM)	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      LC1Nh_0135 gap; glyceraldehyde-3-phosphate dehydrogenase (NAD(P))	K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D      LC1Nh_0188 pgk; phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      LC1Nh_0954 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      LC1Nh_0282 eno; enolase, C-terminal TIM barrel domain	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      LC1Nh_0586 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      LC1Nh_0232 ppsA; phosphoenolpyruvate synthase / pyruvate, water dikinase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      LC1Nh_0057 pdhA; pyruvate dehydrogenase E1 component alpha subunit	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      LC1Nh_0056 pdhB; pyruvate dehydrogenase E1 component beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      LC1Nh_0055 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      LC1Nh_0059 acdA; acetate-CoA ligase (ADP-forming) subunit alpha	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      LC1Nh_0113 phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1152 pmm; phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C    00020 Citrate cycle (TCA cycle) [PATH:ncon00020]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      LC1Nh_1034 sucD; succinyl-CoA synthetase alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      LC1Nh_0057 pdhA; pyruvate dehydrogenase E1 component alpha subunit	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      LC1Nh_0056 pdhB; pyruvate dehydrogenase E1 component beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      LC1Nh_0055 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C    00030 Pentose phosphate pathway [PATH:ncon00030]
D      LC1Nh_0118 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      LC1Nh_0434 hypothetical protein	K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
D      LC1Nh_0694 NAD dependent epimerase/dehydratase	K19243 azf; NAD+ dependent glucose-6-phosphate dehydrogenase [EC:1.1.1.388]
D      LC1Nh_0113 phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1152 pmm; phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_0149 fbaB; fructose-bisphosphate aldolase, class I	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      LC1Nh_0150 fbp; fructose-1,6-bisphosphatase I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      LC1Nh_0114 ADP-dependent phosphofructokinase/glucokinase	K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
C    00040 Pentose and glucuronate interconversions
D      LC1Nh_1189 ugd; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C    00051 Fructose and mannose metabolism [PATH:ncon00051]
D      LC1Nh_0113 phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1152 pmm; phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_0150 fbp; fructose-1,6-bisphosphatase I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      LC1Nh_0149 fbaB; fructose-bisphosphate aldolase, class I	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      LC1Nh_0115 tpiA; triosephosphate isomerase (TIM)	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D      LC1Nh_0570 HAD-superfamily hydrolase	K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C    00052 Galactose metabolism [PATH:ncon00052]
D      LC1Nh_1176 galE; UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      LC1Nh_1179 galE2; UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      LC1Nh_0113 phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1152 pmm; phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_0180 glk; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_1157 glk2; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
C    00053 Ascorbate and aldarate metabolism
D      LC1Nh_1189 ugd; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C    00500 Starch and sucrose metabolism [PATH:ncon00500]
D      LC1Nh_0795 bglB; glycosyl hydrolase family 1	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D      LC1Nh_0117 glycogen synthase	K00693 GYS; glycogen synthase [EC:2.4.1.11]
D      LC1Nh_0131 glycosyl hydrolase family 57	K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1]
D      LC1Nh_0113 phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1152 pmm; phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_0180 glk; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_1157 glk2; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_0118 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      LC1Nh_0434 hypothetical protein	K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
C    00520 Amino sugar and nucleotide sugar metabolism [PATH:ncon00520]
D      LC1Nh_0637 glmS; glucosamine--fructose-6-phosphate aminotransferase	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      LC1Nh_1149 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D      LC1Nh_1150 glmU2; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D      LC1Nh_0180 glk; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_1157 glk2; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_0113 phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1152 pmm; phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1189 ugd; UDP-glucose 6-dehydrogenase	K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D      LC1Nh_1176 galE; UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      LC1Nh_1179 galE2; UDP-glucose 4-epimerase	K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D      LC1Nh_0118 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      LC1Nh_0434 hypothetical protein	K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9]
C    00620 Pyruvate metabolism [PATH:ncon00620]
D      LC1Nh_0057 pdhA; pyruvate dehydrogenase E1 component alpha subunit	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      LC1Nh_0056 pdhB; pyruvate dehydrogenase E1 component beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      LC1Nh_0055 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      LC1Nh_0586 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      LC1Nh_0059 acdA; acetate-CoA ligase (ADP-forming) subunit alpha	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      LC1Nh_0514 ldhA; D-lactate dehydrogenase	K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D      LC1Nh_0014 gloA; lactoylglutathione lyase	K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D      LC1Nh_0063 sfcA; malate dehydrogenase (oxaloacetate-decarboxylating)	K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D      LC1Nh_0232 ppsA; phosphoenolpyruvate synthase / pyruvate, water dikinase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
C    00630 Glyoxylate and dicarboxylate metabolism [PATH:ncon00630]
D      LC1Nh_0388 pgp; phosphoglycolate phosphatase	K19269 PGP; phosphoglycolate phosphatase [EC:3.1.3.18 3.1.3.48]
D      LC1Nh_0157 glyA; glycine/serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00640 Propanoate metabolism [PATH:ncon00640]
D      LC1Nh_0059 acdA; acetate-CoA ligase (ADP-forming) subunit alpha	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      LC1Nh_1034 sucD; succinyl-CoA synthetase alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C    00650 Butanoate metabolism [PATH:ncon00650]
D      LC1Nh_0599 fabG; SDR family oxidoreductase	K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C    00660 C5-Branched dibasic acid metabolism
D      LC1Nh_1034 sucD; succinyl-CoA synthetase alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C    00562 Inositol phosphate metabolism [PATH:ncon00562]
D      LC1Nh_0673 suhB; myo-inositol-1(or 4)-monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      LC1Nh_0115 tpiA; triosephosphate isomerase (TIM)	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B  09102 Energy metabolism
C    00190 Oxidative phosphorylation [PATH:ncon00190]
D      LC1Nh_0831 ntpA; V/A-type H+/Na+-transporting ATPase subunit A	K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D      LC1Nh_0830 ntpB; V/A-type H+/Na+-transporting ATPase subunit B	K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D      LC1Nh_0833 ntpC; V/A-type H+/Na+-transporting ATPase subunit C	K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D      LC1Nh_0829 ntpD; V/A-type H+/Na+-transporting ATPase subunit D	K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D      LC1Nh_0834 ntpE; V/A-type H+/Na+-transporting ATPase subunit E	K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D      LC1Nh_0832 ntpF; V/A-type H+/Na+-transporting ATPase subunit F	K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D      LC1Nh_0837 ntpH; V/A-type H+/Na+-transporting ATPase subunit G/H	K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D      LC1Nh_0836 ntpI; V/A-type H+/Na+-transporting ATPase subunit I	K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D      LC1Nh_0835 ntpK; V/A-type H+/Na+-transporting ATPase subunit K	K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D      LC1Nh_0318 ppa; inorganic pyrophosphatase	K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D      LC1Nh_0098 ppaC; manganese-dependent inorganic pyrophosphatase	K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C    00195 Photosynthesis
C    00196 Photosynthesis - antenna proteins
C    00710 Carbon fixation by Calvin cycle [PATH:ncon00710]
D      LC1Nh_0188 pgk; phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      LC1Nh_0135 gap; glyceraldehyde-3-phosphate dehydrogenase (NAD(P))	K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D      LC1Nh_0149 fbaB; fructose-bisphosphate aldolase, class I	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      LC1Nh_0150 fbp; fructose-1,6-bisphosphatase I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      LC1Nh_0115 tpiA; triosephosphate isomerase (TIM)	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C    00720 Other carbon fixation pathways [PATH:ncon00720]
D      LC1Nh_0232 ppsA; phosphoenolpyruvate synthase / pyruvate, water dikinase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      LC1Nh_1034 sucD; succinyl-CoA synthetase alpha subunit	K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D      LC1Nh_1032 sucC; succinyl-CoA synthetase beta subunit	K15232 ccsA; citryl-CoA synthetase large subunit [EC:6.2.1.18]
D      LC1Nh_1036 ccl; citryl-CoA lyase	K15234 ccl; citryl-CoA lyase [EC:4.1.3.34]
C    00680 Methane metabolism [PATH:ncon00680]
D      LC1Nh_0157 glyA; glycine/serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      LC1Nh_0282 eno; enolase, C-terminal TIM barrel domain	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      LC1Nh_0149 fbaB; fructose-bisphosphate aldolase, class I	K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D      LC1Nh_0150 fbp; fructose-1,6-bisphosphatase I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      LC1Nh_0114 ADP-dependent phosphofructokinase/glucokinase	K00918 pfkC; ADP-dependent phosphofructokinase/glucokinase [EC:2.7.1.146 2.7.1.147]
D      LC1Nh_0232 ppsA; phosphoenolpyruvate synthase / pyruvate, water dikinase	K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D      LC1Nh_0954 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
C    00910 Nitrogen metabolism
D      LC1Nh_0616 cynT; carbonic anhydrase	K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C    00920 Sulfur metabolism [PATH:ncon00920]
D      LC1Nh_1185 cysH; phosphoadenosine phosphosulfate reductase	K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
B
B  09103 Lipid metabolism
C    00061 Fatty acid biosynthesis
C    00062 Fatty acid elongation
C    00071 Fatty acid degradation
C    00073 Cutin, suberine and wax biosynthesis
C    00074 Mycolic acid biosynthesis
C    00100 Steroid biosynthesis
C    00120 Primary bile acid biosynthesis
C    00121 Secondary bile acid biosynthesis
C    00140 Steroid hormone biosynthesis
C    00561 Glycerolipid metabolism
D      LC1Nh_0247 glycosyl transferase group 1	K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
C    00564 Glycerophospholipid metabolism
C    00565 Ether lipid metabolism
C    00600 Sphingolipid metabolism
C    00590 Arachidonic acid metabolism
C    00591 Linoleic acid metabolism
C    00592 alpha-Linolenic acid metabolism
C    01040 Biosynthesis of unsaturated fatty acids
B
B  09104 Nucleotide metabolism
C    00230 Purine metabolism [PATH:ncon00230]
D      LC1Nh_0113 phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1152 pmm; phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_0198 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      LC1Nh_0569 rdgB; XTP/dITP diphosphohydrolase	K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D      LC1Nh_0776 rdgB2; inosine/xanthosine triphosphate pyrophosphatase,all-alpha NTP-PPase family	K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D      LC1Nh_0497 nrdA; ribonucleoside-diphosphate reductase alpha chain	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      LC1Nh_0845 adk; adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      LC1Nh_0358 adenylate kinase	K18532 AK6; adenylate kinase [EC:2.7.4.3]
D      LC1Nh_0111 hit; HIT family hydrolase	K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C    00240 Pyrimidine metabolism [PATH:ncon00240]
D      LC1Nh_0292 pyrH; uridylate kinase	K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D      LC1Nh_0198 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      LC1Nh_0446 pyrG; CTP synthase	K01937 pyrG; CTP synthase [EC:6.3.4.2]
D      LC1Nh_1127 cmk; cytidylate kinase	K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D      LC1Nh_0376 dcd; dCTP deaminase	K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D      LC1Nh_0497 nrdA; ribonucleoside-diphosphate reductase alpha chain	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      LC1Nh_0161 tmk; thymidylate kinase	K00943 tmk; dTMP kinase [EC:2.7.4.9]
D      LC1Nh_0172 dut; dUTP pyrophosphatase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      LC1Nh_0155 thyA; thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B  09105 Amino acid metabolism
C    00250 Alanine, aspartate and glutamate metabolism [PATH:ncon00250]
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D      LC1Nh_0637 glmS; glucosamine--fructose-6-phosphate aminotransferase	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
C    00260 Glycine, serine and threonine metabolism [PATH:ncon00260]
D      LC1Nh_0157 glyA; glycine/serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      LC1Nh_0954 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      LC1Nh_0072 ilvA; threonine dehydratase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C    00270 Cysteine and methionine metabolism [PATH:ncon00270]
D      LC1Nh_0375 metK; S-adenosylmethionine synthetase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      LC1Nh_0465 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase	K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D      LC1Nh_1012 dcm; DNA (cytosine-5)-methyltransferase 1	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00280 Valine, leucine and isoleucine degradation [PATH:ncon00280]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00290 Valine, leucine and isoleucine biosynthesis
D      LC1Nh_0072 ilvA; threonine dehydratase	K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C    00300 Lysine biosynthesis [PATH:ncon00300]
D      LC1Nh_0540 dapA; 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D      LC1Nh_0190 dapE; succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      LC1Nh_0466 dapE2; succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
C    00310 Lysine degradation
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00220 Arginine biosynthesis
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00330 Arginine and proline metabolism
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00340 Histidine metabolism
C    00350 Tyrosine metabolism
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00360 Phenylalanine metabolism
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00380 Tryptophan metabolism
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C    00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ncon00400]
D      LC1Nh_0074 pheA1; chorismate mutase	K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D      LC1Nh_0077 tyrA2; prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      LC1Nh_0075 pheA2; prephenate dehydratase	K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
B
B  09106 Metabolism of other amino acids
C    00410 beta-Alanine metabolism
C    00430 Taurine and hypotaurine metabolism
C    00440 Phosphonate and phosphinate metabolism
D      LC1Nh_0579 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C    00450 Selenocompound metabolism [PATH:ncon00450]
D      LC1Nh_0265 sufS; cysteine desulfurase / selenocysteine lyase	K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D      LC1Nh_0509 trxB; thioredoxin reductase (NADPH)	K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D      LC1Nh_0387 metG; methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C    00460 Cyanoamino acid metabolism [PATH:ncon00460]
D      LC1Nh_0795 bglB; glycosyl hydrolase family 1	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D      LC1Nh_0157 glyA; glycine/serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C    00470 D-Amino acid metabolism
C    00480 Glutathione metabolism
B
B  09107 Glycan biosynthesis and metabolism
C    00510 N-Glycan biosynthesis
C    00513 Various types of N-glycan biosynthesis
C    00512 Mucin type O-glycan biosynthesis
C    00515 Mannose type O-glycan biosynthesis
C    00514 Other types of O-glycan biosynthesis
C    00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C    00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C    00533 Glycosaminoglycan biosynthesis - keratan sulfate
C    00531 Glycosaminoglycan degradation
C    00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C    00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C    00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C    00604 Glycosphingolipid biosynthesis - ganglio series
C    00511 Other glycan degradation
C    00540 Lipopolysaccharide biosynthesis
C    00542 O-Antigen repeat unit biosynthesis
C    00541 O-Antigen nucleotide sugar biosynthesis
C    00550 Peptidoglycan biosynthesis
C    00552 Teichoic acid biosynthesis [PATH:ncon00552]
D      LC1Nh_0615 bacA; undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      LC1Nh_0672 bcrC; undecaprenyl-diphosphatase	K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C    00571 Lipoarabinomannan (LAM) biosynthesis
C    00572 Arabinogalactan biosynthesis - Mycobacterium
C    00543 Exopolysaccharide biosynthesis [PATH:ncon00543]
D      LC1Nh_0206 glycosyl transferase family 2, poly-beta-1,6 N-acetyl-D-glucosamine synthase	K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B  09108 Metabolism of cofactors and vitamins
C    00730 Thiamine metabolism
D      LC1Nh_0845 adk; adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
C    00740 Riboflavin metabolism [PATH:ncon00740]
D      LC1Nh_0414 ribE; riboflavin synthase alpha chain	K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D      LC1Nh_0881 rfk; riboflavin kinase	K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161]
D      LC1Nh_0256 ribL; FAD synthetase	K14656 ribL; FAD synthetase [EC:2.7.7.2]
C    00750 Vitamin B6 metabolism
C    00760 Nicotinate and nicotinamide metabolism [PATH:ncon00760]
D      LC1Nh_0141 nadM; nicotinamide-nucleotide adenylyltransferase	K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1]
C    00770 Pantothenate and CoA biosynthesis
C    00780 Biotin metabolism
C    00785 Lipoic acid metabolism [PATH:ncon00785]
D      LC1Nh_1029 hypothetical protein	K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D      LC1Nh_1030 lplA; lipoate--protein ligase	K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      LC1Nh_0057 pdhA; pyruvate dehydrogenase E1 component alpha subunit	K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D      LC1Nh_0056 pdhB; pyruvate dehydrogenase E1 component beta subunit	K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D      LC1Nh_0055 aceF; pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)	K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C    00790 Folate biosynthesis [PATH:ncon00790]
D      LC1Nh_0153 folA; dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      LC1Nh_0691 phhB; 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      LC1Nh_0860 phhB2; 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
C    00670 One carbon pool by folate [PATH:ncon00670]
D      LC1Nh_0153 folA; dihydrofolate reductase	K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D      LC1Nh_0157 glyA; glycine/serine hydroxymethyltransferase	K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D      LC1Nh_0155 thyA; thymidylate synthase	K00560 thyA; thymidylate synthase [EC:2.1.1.45]
C    00830 Retinol metabolism
C    00860 Porphyrin metabolism [PATH:ncon00860]
D      LC1Nh_0342 gltX; glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      LC1Nh_1141 hypothetical protein	K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D      LC1Nh_1031 pduO; cob(I)alamin adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C    00130 Ubiquinone and other terpenoid-quinone biosynthesis
D      LC1Nh_0467 menC; O-succinylbenzoate synthase	K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
B
B  09109 Metabolism of terpenoids and polyketides
C    00900 Terpenoid backbone biosynthesis
D      LC1Nh_0145 hypothetical protein	K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
C    00902 Monoterpenoid biosynthesis
C    00909 Sesquiterpenoid and triterpenoid biosynthesis
C    00904 Diterpenoid biosynthesis
C    00906 Carotenoid biosynthesis
C    00905 Brassinosteroid biosynthesis
C    00981 Insect hormone biosynthesis
C    00908 Zeatin biosynthesis
C    00903 Limonene degradation
C    00907 Pinene, camphor and geraniol degradation
C    01052 Type I polyketide structures
C    00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C    01051 Biosynthesis of ansamycins
C    01059 Biosynthesis of enediyne antibiotics
C    01056 Biosynthesis of type II polyketide backbone
C    01057 Biosynthesis of type II polyketide products
C    00253 Tetracycline biosynthesis
C    00523 Polyketide sugar unit biosynthesis
D      LC1Nh_0480 rfbA; UTP--glucose-1-phosphate urydylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      LC1Nh_1149 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D      LC1Nh_1150 glmU2; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C    01054 Nonribosomal peptide structures
C    01053 Biosynthesis of siderophore group nonribosomal peptides
C    01055 Biosynthesis of vancomycin group antibiotics
B
B  09110 Biosynthesis of other secondary metabolites
C    00940 Phenylpropanoid biosynthesis
C    00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C    00941 Flavonoid biosynthesis
C    00944 Flavone and flavonol biosynthesis
C    00942 Anthocyanin biosynthesis
C    00943 Isoflavonoid biosynthesis
C    00946 Degradation of flavonoids [PATH:ncon00946]
D      LC1Nh_0795 bglB; glycosyl hydrolase family 1	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C    00901 Indole alkaloid biosynthesis
C    00403 Indole diterpene alkaloid biosynthesis
C    00950 Isoquinoline alkaloid biosynthesis
C    00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C    00996 Biosynthesis of various alkaloids
C    00232 Caffeine metabolism
C    00965 Betalain biosynthesis
C    00966 Glucosinolate biosynthesis
C    00402 Benzoxazinoid biosynthesis
C    00311 Penicillin and cephalosporin biosynthesis
C    00332 Carbapenem biosynthesis
C    00261 Monobactam biosynthesis
D      LC1Nh_0540 dapA; 4-hydroxy-tetrahydrodipicolinate synthase	K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C    00331 Clavulanic acid biosynthesis
C    00521 Streptomycin biosynthesis [PATH:ncon00521]
D      LC1Nh_0180 glk; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_1157 glk2; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_0113 phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_1152 pmm; phosphomannomutase / phosphoglucomutase	K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D      LC1Nh_0673 suhB; myo-inositol-1(or 4)-monophosphatase	K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D      LC1Nh_0480 rfbA; UTP--glucose-1-phosphate urydylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      LC1Nh_1149 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D      LC1Nh_1150 glmU2; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C    00524 Neomycin, kanamycin and gentamicin biosynthesis
D      LC1Nh_0180 glk; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
D      LC1Nh_1157 glk2; glucokinase	K25026 glk; glucokinase [EC:2.7.1.2]
C    00525 Acarbose and validamycin biosynthesis
D      LC1Nh_0480 rfbA; UTP--glucose-1-phosphate urydylyltransferase	K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D      LC1Nh_1149 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
D      LC1Nh_1150 glmU2; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase	K23144 K23144; UDP-N-acetylglucosamine diphosphorylase / glucose-1-phosphate thymidylyltransferase / UDP-N-acetylgalactosamine diphosphorylase / glucosamine-1-phosphate N-acetyltransferase / galactosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.7.7.24 2.7.7.83 2.3.1.157 2.3.1.276]
C    00401 Novobiocin biosynthesis [PATH:ncon00401]
D      LC1Nh_0077 tyrA2; prephenate dehydrogenase	K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00404 Staurosporine biosynthesis
C    00405 Phenazine biosynthesis
C    00333 Prodigiosin biosynthesis
C    00254 Aflatoxin biosynthesis
C    00998 Biosynthesis of various antibiotics
C    00999 Biosynthesis of various plant secondary metabolites [PATH:ncon00999]
D      LC1Nh_0375 metK; S-adenosylmethionine synthetase	K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D      LC1Nh_0795 bglB; glycosyl hydrolase family 1	K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C    00997 Biosynthesis of various other secondary metabolites
B
B  09111 Xenobiotics biodegradation and metabolism
C    00362 Benzoate degradation [PATH:ncon00362]
D      LC1Nh_1028 alpha/beta hydrolase fold protein	K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D      LC1Nh_0527 fdx; ferredoxin, 2Fe-2S	K04755 fdx; ferredoxin, 2Fe-2S
C    00627 Aminobenzoate degradation
C    00364 Fluorobenzoate degradation
C    00625 Chloroalkane and chloroalkene degradation
C    00361 Chlorocyclohexane and chlorobenzene degradation
C    00623 Toluene degradation
C    00622 Xylene degradation
C    00633 Nitrotoluene degradation
C    00642 Ethylbenzene degradation
C    00643 Styrene degradation
C    00791 Atrazine degradation
C    00930 Caprolactam degradation
C    00363 Bisphenol degradation
C    00621 Dioxin degradation
C    00626 Naphthalene degradation
C    00624 Polycyclic aromatic hydrocarbon degradation
C    00365 Furfural degradation
C    00984 Steroid degradation
C    00980 Metabolism of xenobiotics by cytochrome P450
C    00982 Drug metabolism - cytochrome P450
C    00983 Drug metabolism - other enzymes
B
B  09112 Not included in regular maps
C    09113 Global maps only
#
A09120 Genetic Information Processing
B
B  09121 Transcription
C    03020 RNA polymerase [PATH:ncon03020]
D      LC1Nh_0890 rpoB2; DNA-directed RNA polymerase subunit B''	K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
D      LC1Nh_0892 rpoA1; DNA-directed RNA polymerase subunit A'	K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D      LC1Nh_0893 rpoA2; DNA-directed RNA polymerase subunit A''	K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D      LC1Nh_1072 rpoD; DNA-directed RNA polymerase subunit D	K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D      LC1Nh_0303 rpoL; DNA-directed RNA polymerase subunit L	K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D      LC1Nh_0780 rpoE1; DNA-directed RNA polymerase subunit E'	K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D      LC1Nh_0440 rpoF; DNA-directed RNA polymerase subunit F	K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D      LC1Nh_0889 rpoH; DNA-directed RNA polymerase subunit H	K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D      LC1Nh_0283 rpoK; DNA-directed RNA polymerase subunit K	K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D      LC1Nh_1047 rpoN; DNA-directed RNA polymerase subunit N	K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D      LC1Nh_0562 rpoP; DNA-directed RNA polymerase subunit P	K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
C    03022 Basal transcription factors [PATH:ncon03022]
D      LC1Nh_0530 tfb; transcription initiation factor TFIIB	K03124 TFIIB; transcription initiation factor TFIIB
D      LC1Nh_0840 tfb2; transcription initiation factor TFIIB	K03124 TFIIB; transcription initiation factor TFIIB
D      LC1Nh_0857 tbp; transcription initiation factor TFIID TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      LC1Nh_0307 DNA excision repair protein ERCC-3	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      LC1Nh_0270 DNA excision repair protein ERCC-2 (helicase)	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C    03040 Spliceosome
B
B  09122 Translation
C    03010 Ribosome [PATH:ncon03010]
D      LC1Nh_0279 rps2p; 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      LC1Nh_1115 rps3p; 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      LC1Nh_1074 rps4p; 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      LC1Nh_1096 rps5p; 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      LC1Nh_0897 rps7p; 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      LC1Nh_1101 rps8p; 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      LC1Nh_1048 rps9p; 30S Ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      LC1Nh_0906 rps10p; 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      LC1Nh_1073 rps11p; 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      LC1Nh_0896 rps12p; 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      LC1Nh_1075 rps13p; 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      LC1Nh_1102 rps14p; 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      LC1Nh_0765 rps15p; 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      LC1Nh_1107 rps17p; 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      LC1Nh_1117 rps19p; 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      LC1Nh_0757 rps3ae; 30S ribosomal protein S3Ae	K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D      LC1Nh_1104 rps4e; 30S ribosomal protein S4e	K02987 RP-S4e; small subunit ribosomal protein S4e
D      LC1Nh_0790 rps6e; 30S ribosomal protein S6e	K02991 RP-S6e; small subunit ribosomal protein S6e
D      LC1Nh_0875 rps8e; 30S ribosomal protein S8e	K02995 RP-S8e; small subunit ribosomal protein S8e
D      LC1Nh_0390 rps17e; 30S ribosomal protein S17e	K02962 RP-S17e; small subunit ribosomal protein S17e
D      LC1Nh_0236 rps19e; 30S ribosomal protein S19e	K02966 RP-S19e; small subunit ribosomal protein S19e
D      LC1Nh_0778 rps24e; 30S ribosomal protein S24e	K02974 RP-S24e; small subunit ribosomal protein S24e
D      LC1Nh_0287 rps27e; 30S ribosomal protein S27e	K02978 RP-S27e; small subunit ribosomal protein S27e
D      LC1Nh_0777 rps27ae; 30S ribosomal protein S27ae	K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D      LC1Nh_0275 rps28e; 30S ribosomal protein S28e	K02979 RP-S28e; small subunit ribosomal protein S28e
D      LC1Nh_0100 rpl1p; 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      LC1Nh_1118 rpl2p; 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      LC1Nh_1121 rpl3p; 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      LC1Nh_1103 rpl5p; 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      LC1Nh_1100 rpl6p; 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      LC1Nh_0099 rpl10p; 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      LC1Nh_0101 rpl11p; 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      LC1Nh_0096 rpl12p; 50S ribosomal protein L12	K02869 RP-L12; large subunit ribosomal protein L12
D      LC1Nh_1049 rpl13p; 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      LC1Nh_1106 rpl14p; 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      LC1Nh_1094 rpl15p; 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      LC1Nh_1097 rpl18p; 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      LC1Nh_1116 rpl22p; 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      LC1Nh_1119 rpl23p; 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      LC1Nh_1114 rpl29p; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      LC1Nh_1095 rpl30p; 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      LC1Nh_1120 rpl4p; 50S ribosomal protein L4	K02930 RP-L4e; large subunit ribosomal protein L4e
D      LC1Nh_0276 rpl7ae; 50S ribosomal protein L7Ae	K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D      LC1Nh_1146 rpl10e; 50S ribosomal protein L10e	K02866 RP-L10e; large subunit ribosomal protein L10e
D      LC1Nh_0854 rpl15e; 50S ribosomal protein L15e	K02877 RP-L15e; large subunit ribosomal protein L15e
D      LC1Nh_1050 rpl18e; 50S ribosomal protein L18e	K02883 RP-L18e; large subunit ribosomal protein L18e
D      LC1Nh_1098 rpl19e; 50S ribosomal protein L19e	K02885 RP-L19e; large subunit ribosomal protein L19e
D      LC1Nh_0439 rpl21e; 50S ribosomal protein L21e	K02889 RP-L21e; large subunit ribosomal protein L21e
D      LC1Nh_0274 rpl24e; 50S ribosomal protein L24e	K02896 RP-L24e; large subunit ribosomal protein L24e
D      LC1Nh_1099 rpl32e; 50S ribosomal protein L32e	K02912 RP-L32e; large subunit ribosomal protein L32e
D      LC1Nh_0877 rpl37e; 50S ribosomal protein L37e	K02922 RP-L37e; large subunit ribosomal protein L37e
D      LC1Nh_0561 rpl37ae; 50S ribosomal protein L37Ae	K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D      LC1Nh_0234 rpl39e; 50S ribosomal protein L39e	K02924 RP-L39e; large subunit ribosomal protein L39e
D      LC1Nh_0613 rpl40e; 50S ribosomal protein L40e	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D      LC1Nh_0288 rpl44e; 50S ribosomal protein L44e	K02929 RP-L44e; large subunit ribosomal protein L44e
D      LC1Nh_0660 rpl18a; 50S ribosomal protein L18a	K02944 RP-LX; large subunit ribosomal protein LX
C    00970 Aminoacyl-tRNA biosynthesis [PATH:ncon00970]
D      LC1Nh_1041 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      LC1Nh_0986 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
D      LC1Nh_0342 gltX; glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      LC1Nh_0580 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      LC1Nh_0581 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      LC1Nh_0397 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      LC1Nh_0326 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D	K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7]
D      LC1Nh_0322 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E	K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7]
D      LC1Nh_0094 alaS; alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      LC1Nh_0187 glyS; glycyl-tRNA synthetase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      LC1Nh_0238 thrS; threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      LC1Nh_0083 serS; seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      LC1Nh_0411 cysS; cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      LC1Nh_0387 metG; methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      LC1Nh_0381 valS; valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      LC1Nh_0108 leuS; leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      LC1Nh_0405 ileS; isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      LC1Nh_0539 lysS; lysyl-tRNA synthetase, class II	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      LC1Nh_0525 lysK; lysyl-tRNA synthetase, class I	K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D      LC1Nh_0989 argS; arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      LC1Nh_0460 proS; prolyl-tRNA synthetase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      LC1Nh_0521 proS2; prolyl-tRNA synthetase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      LC1Nh_0619 hisS; histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      LC1Nh_0194 pheS; phenylalanyl-tRNA synthetase alpha chain	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      LC1Nh_0195 pheT; phenylalanyl-tRNA synthetase beta chain	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      LC1Nh_0086 tyrS; tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      LC1Nh_0192 trpS; tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C    03013 Nucleocytoplasmic transport
C    03015 mRNA surveillance pathway
C    03008 Ribosome biogenesis in eukaryotes
B
B  09123 Folding, sorting and degradation
C    03060 Protein export [PATH:ncon03060]
D      LC1Nh_1093 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      LC1Nh_1169 secD; preprotein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      LC1Nh_1168 secF; preprotein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      LC1Nh_0652 ffh; signal recognition particle subunit SRP54	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      LC1Nh_0658 ftsY; fused signal recognition particle receptor	K03110 ftsY; fused signal recognition particle receptor
D      LC1Nh_0103 secE; protein translocase SEC61 complex gamma subunit	K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D      LC1Nh_0432 tatA; sec-independent protein translocase protein TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      LC1Nh_0433 tatC; sec-independent protein translocase protein TatC	K03118 tatC; sec-independent protein translocase protein TatC
D      LC1Nh_0308 sipW; signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      LC1Nh_0018 sec11; signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C    04141 Protein processing in endoplasmic reticulum
C    04130 SNARE interactions in vesicular transport
C    04120 Ubiquitin mediated proteolysis
C    04122 Sulfur relay system [PATH:ncon04122]
D      LC1Nh_0366 moeB; molybdopterin-synthase adenylyltransferase	K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D      LC1Nh_1163 thiS; thiamine biosynthesis protein ThiS	K03154 thiS; sulfur carrier protein
C    03050 Proteasome [PATH:ncon03050]
D      LC1Nh_0585 rpt1; ATP-dependent 26S proteasome regulatory subunit	K03420 psmR; proteasome regulatory subunit
D      LC1Nh_0554 psmA; proteasome alpha subunit	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      LC1Nh_0475 psmB; proteasome beta subunit	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C    03018 RNA degradation [PATH:ncon03018]
D      LC1Nh_0558 rrp4; exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4
D      LC1Nh_0560 rrp42; exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42
D      LC1Nh_0559 rrp41; exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41
D      LC1Nh_0282 eno; enolase, C-terminal TIM barrel domain	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      LC1Nh_0471 deaD2; ATP-dependent RNA helicase DeaD	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      LC1Nh_0327 rnj; ribonuclease J	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      LC1Nh_0042 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
B
B  09124 Replication and repair
C    03030 DNA replication [PATH:ncon03030]
D      LC1Nh_0183 rnhB; ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      LC1Nh_0050 polB2; archaeal DNA polymerase I	K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D      LC1Nh_0002 polB; DNA polymerase II small subunit	K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D      LC1Nh_0003 polC; DNA polymerase II large subunit	K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D      LC1Nh_0861 mcm; replicative DNA helicase Mcm	K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D      LC1Nh_0296 pcnA; DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      LC1Nh_0357 rfcS; replication factor C small subunit	K04801 rfcS; replication factor C small subunit
D      LC1Nh_0356 rfcL; replication factor C large subunit	K04800 rfcL; replication factor C large subunit
D      LC1Nh_0957 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      LC1Nh_0852 lig1; DNA ligase 1	K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C    03410 Base excision repair [PATH:ncon03410]
D      LC1Nh_1164 ogg; 3-methyladenine DNA glycosylase/8-oxoguanine DNAglycosylase	K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D      LC1Nh_0334 nth; endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      LC1Nh_0871 nth2; endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      LC1Nh_0296 pcnA; DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      LC1Nh_0957 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      LC1Nh_0852 lig1; DNA ligase 1	K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D      LC1Nh_0688 udg; uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      LC1Nh_0507 nfo; deoxyribonuclease IV	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D      LC1Nh_0761 recJ2; single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C    03420 Nucleotide excision repair [PATH:ncon03420]
D      LC1Nh_0604 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      LC1Nh_0307 DNA excision repair protein ERCC-3	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      LC1Nh_0270 DNA excision repair protein ERCC-2 (helicase)	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      LC1Nh_0296 pcnA; DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      LC1Nh_0852 lig1; DNA ligase 1	K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C    03430 Mismatch repair [PATH:ncon03430]
D      LC1Nh_0604 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      LC1Nh_0761 recJ2; single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      LC1Nh_0296 pcnA; DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      LC1Nh_0852 lig1; DNA ligase 1	K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
C    03440 Homologous recombination
D      LC1Nh_0761 recJ2; single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
C    03450 Non-homologous end-joining
D      LC1Nh_0957 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
C    03460 Fanconi anemia pathway
B
B  09126 Chromosome
C    03082 ATP-dependent chromatin remodeling
C    03083 Polycomb repressive complex
B
B  09125 Information processing in viruses
C    03230 Viral genome structure
C    03240 Viral replication
C    03250 Viral life cycle - HIV-1
D      LC1Nh_0779 rpoE2; DNA-directed RNA polymerase subunit E''	K15171 SUPT4H1; transcription elongation factor SPT4
D      LC1Nh_0102 nusG; transcriptional antiterminator NusG	K15172 SUPT5H; transcription elongation factor SPT5
C    03260 Virion - Human immunodeficiency virus
C    03271 Virion - Rotavirus
C    03262 Virion - Coronavirus
C    03261 Virion - Influenza virus
C    03263 Virion - Enterovirus
C    03264 Virion - Flavivirus
C    03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C    03272 Virion - Hepatitis viruses
C    03266 Virion - Herpesvirus
C    03268 Virion - Orthopoxvirus
C    03267 Virion - Adenovirus
C    03259 Virion - Bacteriophages T4 and T7
C    03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B  09131 Membrane transport
C    02010 ABC transporters
C    02060 Phosphotransferase system (PTS) [PATH:ncon02060]
D      LC1Nh_0506 hypothetical protein	K02784 ptsH; phosphocarrier protein HPr
C    03070 Bacterial secretion system [PATH:ncon03070]
D      LC1Nh_1169 secD; preprotein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      LC1Nh_1168 secF; preprotein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      LC1Nh_1093 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      LC1Nh_0658 ftsY; fused signal recognition particle receptor	K03110 ftsY; fused signal recognition particle receptor
D      LC1Nh_0652 ffh; signal recognition particle subunit SRP54	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      LC1Nh_0432 tatA; sec-independent protein translocase protein TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      LC1Nh_0433 tatC; sec-independent protein translocase protein TatC	K03118 tatC; sec-independent protein translocase protein TatC
B
B  09132 Signal transduction
C    02020 Two-component system
D      LC1Nh_0063 sfcA; malate dehydrogenase (oxaloacetate-decarboxylating)	K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
C    04010 MAPK signaling pathway
C    04013 MAPK signaling pathway - fly
C    04016 MAPK signaling pathway - plant
C    04011 MAPK signaling pathway - yeast
C    04012 ErbB signaling pathway
C    04014 Ras signaling pathway
C    04015 Rap1 signaling pathway
C    04310 Wnt signaling pathway
C    04330 Notch signaling pathway
C    04340 Hedgehog signaling pathway
C    04341 Hedgehog signaling pathway - fly
C    04350 TGF-beta signaling pathway
C    04390 Hippo signaling pathway
C    04391 Hippo signaling pathway - fly
C    04392 Hippo signaling pathway - multiple species
C    04370 VEGF signaling pathway
C    04371 Apelin signaling pathway
C    04630 JAK-STAT signaling pathway
C    04064 NF-kappa B signaling pathway
C    04668 TNF signaling pathway
C    04066 HIF-1 signaling pathway
C    04068 FoxO signaling pathway
C    04020 Calcium signaling pathway
C    04070 Phosphatidylinositol signaling system
C    04072 Phospholipase D signaling pathway
C    04071 Sphingolipid signaling pathway
C    04024 cAMP signaling pathway
C    04022 cGMP-PKG signaling pathway
C    04151 PI3K-Akt signaling pathway
C    04152 AMPK signaling pathway
C    04150 mTOR signaling pathway
C    04075 Plant hormone signal transduction
B
B  09133 Signaling molecules and interaction
C    04080 Neuroactive ligand-receptor interaction
C    04060 Cytokine-cytokine receptor interaction
C    04061 Viral protein interaction with cytokine and cytokine receptor
C    04512 ECM-receptor interaction
C    04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B  09141 Transport and catabolism
C    04144 Endocytosis
C    04145 Phagosome
C    04142 Lysosome
C    04146 Peroxisome
C    04140 Autophagy - animal
C    04138 Autophagy - yeast
C    04136 Autophagy - other
C    04137 Mitophagy - animal
C    04139 Mitophagy - yeast
C    04148 Efferocytosis
B
B  09143 Cell growth and death
C    04110 Cell cycle
C    04111 Cell cycle - yeast
C    04112 Cell cycle - Caulobacter
C    04113 Meiosis - yeast
C    04114 Oocyte meiosis
C    04210 Apoptosis
C    04214 Apoptosis - fly
C    04215 Apoptosis - multiple species
C    04216 Ferroptosis
C    04217 Necroptosis
C    04115 p53 signaling pathway
C    04218 Cellular senescence
B
B  09144 Cellular community - eukaryotes
C    04510 Focal adhesion
C    04520 Adherens junction
C    04530 Tight junction
C    04540 Gap junction
C    04550 Signaling pathways regulating pluripotency of stem cells
B
B  09145 Cellular community - prokaryotes
C    02024 Quorum sensing [PATH:ncon02024]
D      LC1Nh_1093 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      LC1Nh_0658 ftsY; fused signal recognition particle receptor	K03110 ftsY; fused signal recognition particle receptor
D      LC1Nh_0652 ffh; signal recognition particle subunit SRP54	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C    05111 Biofilm formation - Vibrio cholerae
C    02025 Biofilm formation - Pseudomonas aeruginosa
C    02026 Biofilm formation - Escherichia coli
B
B  09142 Cell motility
C    02030 Bacterial chemotaxis
C    02040 Flagellar assembly
C    04814 Motor proteins
C    04820 Cytoskeleton in muscle cells
D      LC1Nh_0282 eno; enolase, C-terminal TIM barrel domain	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C    04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B  09151 Immune system
C    04640 Hematopoietic cell lineage
C    04610 Complement and coagulation cascades
C    04611 Platelet activation
C    04613 Neutrophil extracellular trap formation
C    04620 Toll-like receptor signaling pathway
C    04624 Toll and Imd signaling pathway
C    04621 NOD-like receptor signaling pathway
C    04622 RIG-I-like receptor signaling pathway
C    04623 Cytosolic DNA-sensing pathway
C    04625 C-type lectin receptor signaling pathway
C    04650 Natural killer cell mediated cytotoxicity
C    04612 Antigen processing and presentation
C    04660 T cell receptor signaling pathway
C    04658 Th1 and Th2 cell differentiation
C    04659 Th17 cell differentiation
C    04657 IL-17 signaling pathway
C    04662 B cell receptor signaling pathway
C    04664 Fc epsilon RI signaling pathway
C    04666 Fc gamma R-mediated phagocytosis
C    04670 Leukocyte transendothelial migration
C    04672 Intestinal immune network for IgA production
C    04062 Chemokine signaling pathway
B
B  09152 Endocrine system
C    04911 Insulin secretion
C    04910 Insulin signaling pathway
C    04922 Glucagon signaling pathway
C    04923 Regulation of lipolysis in adipocytes
C    04920 Adipocytokine signaling pathway
C    03320 PPAR signaling pathway
C    04929 GnRH secretion
C    04912 GnRH signaling pathway
C    04913 Ovarian steroidogenesis
C    04915 Estrogen signaling pathway
C    04914 Progesterone-mediated oocyte maturation
C    04917 Prolactin signaling pathway
C    04921 Oxytocin signaling pathway
C    04926 Relaxin signaling pathway
C    04935 Growth hormone synthesis, secretion and action
C    04918 Thyroid hormone synthesis
C    04919 Thyroid hormone signaling pathway
C    04928 Parathyroid hormone synthesis, secretion and action
C    04916 Melanogenesis
C    04924 Renin secretion
C    04614 Renin-angiotensin system
C    04925 Aldosterone synthesis and secretion
C    04927 Cortisol synthesis and secretion
B
B  09153 Circulatory system
C    04260 Cardiac muscle contraction
C    04261 Adrenergic signaling in cardiomyocytes
C    04270 Vascular smooth muscle contraction
B
B  09154 Digestive system
C    04970 Salivary secretion
C    04971 Gastric acid secretion
C    04972 Pancreatic secretion
C    04976 Bile secretion
C    04973 Carbohydrate digestion and absorption
C    04974 Protein digestion and absorption
C    04975 Fat digestion and absorption
C    04979 Cholesterol metabolism
C    04977 Vitamin digestion and absorption
C    04980 Cobalamin transport and metabolism
D      LC1Nh_1031 pduO; cob(I)alamin adenosyltransferase	K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
C    04978 Mineral absorption
B
B  09155 Excretory system
C    04962 Vasopressin-regulated water reabsorption
C    04960 Aldosterone-regulated sodium reabsorption
C    04961 Endocrine and other factor-regulated calcium reabsorption
C    04964 Proximal tubule bicarbonate reclamation
C    04966 Collecting duct acid secretion
B
B  09156 Nervous system
C    04724 Glutamatergic synapse
C    04727 GABAergic synapse
C    04725 Cholinergic synapse
C    04728 Dopaminergic synapse
C    04726 Serotonergic synapse
C    04720 Long-term potentiation
C    04730 Long-term depression
C    04723 Retrograde endocannabinoid signaling
C    04721 Synaptic vesicle cycle
C    04722 Neurotrophin signaling pathway
B
B  09157 Sensory system
C    04744 Phototransduction
C    04745 Phototransduction - fly
C    04740 Olfactory transduction
C    04742 Taste transduction
C    04750 Inflammatory mediator regulation of TRP channels
B
B  09158 Development and regeneration
C    04320 Dorso-ventral axis formation
C    04360 Axon guidance
C    04361 Axon regeneration
C    04380 Osteoclast differentiation
B
B  09149 Aging
C    04211 Longevity regulating pathway
C    04212 Longevity regulating pathway - worm
C    04213 Longevity regulating pathway - multiple species
B
B  09159 Environmental adaptation
C    04710 Circadian rhythm
C    04713 Circadian entrainment
C    04711 Circadian rhythm - fly
C    04712 Circadian rhythm - plant
C    04714 Thermogenesis
C    04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B  09161 Cancer: overview
C    05200 Pathways in cancer
C    05202 Transcriptional misregulation in cancer
C    05206 MicroRNAs in cancer
C    05205 Proteoglycans in cancer
C    05204 Chemical carcinogenesis - DNA adducts
C    05207 Chemical carcinogenesis - receptor activation
C    05208 Chemical carcinogenesis - reactive oxygen species
C    05203 Viral carcinogenesis
C    05230 Central carbon metabolism in cancer
C    05231 Choline metabolism in cancer
C    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B  09162 Cancer: specific types
C    05210 Colorectal cancer
C    05212 Pancreatic cancer
C    05225 Hepatocellular carcinoma
C    05226 Gastric cancer
C    05214 Glioma
C    05216 Thyroid cancer
C    05221 Acute myeloid leukemia
C    05220 Chronic myeloid leukemia
C    05217 Basal cell carcinoma
C    05218 Melanoma
C    05211 Renal cell carcinoma
C    05219 Bladder cancer
C    05215 Prostate cancer
C    05213 Endometrial cancer
C    05224 Breast cancer
C    05222 Small cell lung cancer
C    05223 Non-small cell lung cancer
B
B  09172 Infectious disease: viral
C    05166 Human T-cell leukemia virus 1 infection
C    05170 Human immunodeficiency virus 1 infection
C    05161 Hepatitis B
C    05160 Hepatitis C
C    05171 Coronavirus disease - COVID-19
C    05164 Influenza A
C    05162 Measles
C    05168 Herpes simplex virus 1 infection
C    05163 Human cytomegalovirus infection
C    05167 Kaposi sarcoma-associated herpesvirus infection
C    05169 Epstein-Barr virus infection
C    05165 Human papillomavirus infection
B
B  09171 Infectious disease: bacterial
C    05110 Vibrio cholerae infection
C    05120 Epithelial cell signaling in Helicobacter pylori infection
C    05130 Pathogenic Escherichia coli infection
C    05132 Salmonella infection
C    05131 Shigellosis
C    05135 Yersinia infection
C    05133 Pertussis
C    05134 Legionellosis
C    05150 Staphylococcus aureus infection
C    05152 Tuberculosis
C    05100 Bacterial invasion of epithelial cells
B
B  09174 Infectious disease: parasitic
C    05146 Amoebiasis
C    05144 Malaria
C    05145 Toxoplasmosis
C    05140 Leishmaniasis
C    05142 Chagas disease
C    05143 African trypanosomiasis
B
B  09163 Immune disease
C    05310 Asthma
C    05322 Systemic lupus erythematosus
C    05323 Rheumatoid arthritis
C    05320 Autoimmune thyroid disease
C    05321 Inflammatory bowel disease
C    05330 Allograft rejection
C    05332 Graft-versus-host disease
C    05340 Primary immunodeficiency
B
B  09164 Neurodegenerative disease
C    05010 Alzheimer disease
C    05012 Parkinson disease
C    05014 Amyotrophic lateral sclerosis
C    05016 Huntington disease
C    05017 Spinocerebellar ataxia
C    05020 Prion disease
C    05022 Pathways of neurodegeneration - multiple diseases
B
B  09165 Substance dependence
C    05030 Cocaine addiction
C    05031 Amphetamine addiction
C    05032 Morphine addiction
C    05033 Nicotine addiction
C    05034 Alcoholism
B
B  09166 Cardiovascular disease
C    05417 Lipid and atherosclerosis
C    05418 Fluid shear stress and atherosclerosis
C    05410 Hypertrophic cardiomyopathy
C    05412 Arrhythmogenic right ventricular cardiomyopathy
C    05414 Dilated cardiomyopathy
C    05415 Diabetic cardiomyopathy
C    05416 Viral myocarditis
B
B  09167 Endocrine and metabolic disease
C    04930 Type II diabetes mellitus
C    04940 Type I diabetes mellitus
C    04950 Maturity onset diabetes of the young
C    04936 Alcoholic liver disease
C    04932 Non-alcoholic fatty liver disease
C    04931 Insulin resistance
C    04933 AGE-RAGE signaling pathway in diabetic complications
C    04934 Cushing syndrome
B
B  09175 Drug resistance: antimicrobial
C    01501 beta-Lactam resistance
C    01502 Vancomycin resistance
C    01503 Cationic antimicrobial peptide (CAMP) resistance
B
B  09176 Drug resistance: antineoplastic
C    01521 EGFR tyrosine kinase inhibitor resistance
C    01524 Platinum drug resistance
C    01523 Antifolate resistance
C    01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B  09181 Protein families: metabolism
C    01000 Enzymes [BR:ncon01000]
C    01001 Protein kinases [BR:ncon01001]
D      LC1Nh_0770 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32	K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D      LC1Nh_0967 rio1; serine/threonine protein kinase	K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
C    01009 Protein phosphatases and associated proteins [BR:ncon01009]
D      LC1Nh_0867 translation initiation factor IF-2 subunit beta	K03238 EIF2S2; translation initiation factor 2 subunit 2
D      LC1Nh_0388 pgp; phosphoglycolate phosphatase	K19269 PGP; phosphoglycolate phosphatase [EC:3.1.3.18 3.1.3.48]
C    01002 Peptidases and inhibitors [BR:ncon01002]
D      LC1Nh_0637 glmS; glucosamine--fructose-6-phosphate aminotransferase	K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D      LC1Nh_0034 pepF; oligoendopeptidase F	K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D      LC1Nh_0190 dapE; succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      LC1Nh_0466 dapE2; succinyl-diaminopimelate desuccinylase	K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D      LC1Nh_0065 map; methionine aminopeptidase	K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D      LC1Nh_0033 ampS; leucyl aminopeptidase (aminopeptidase T)	K19689 ampS; aminopeptidase [EC:3.4.11.-]
D      LC1Nh_0474 ampS2; leucyl aminopeptidase (aminopeptidase T)	K19689 ampS; aminopeptidase [EC:3.4.11.-]
D      LC1Nh_0032 carboxypeptidase Taq (M32)	K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D      LC1Nh_0549 htpx; heat shock protein HtpX	K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D      LC1Nh_0159 aprX; serine protease AprX	K17734 aprX; serine protease AprX [EC:3.4.21.-]
D      LC1Nh_0308 sipW; signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      LC1Nh_0018 sec11; signal peptidase I	K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D      LC1Nh_0849 sppA; protease IV	K04773 sppA; protease IV [EC:3.4.21.-]
D      LC1Nh_0519 rhomboid family protein	K07059 K07059; rhomboid family protein
D      LC1Nh_0186 rhomboid family intramembrane serine protease	K07059 K07059; rhomboid family protein
D      LC1Nh_0554 psmA; proteasome alpha subunit	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      LC1Nh_0475 psmB; proteasome beta subunit	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C    01003 Glycosyltransferases [BR:ncon01003]
D      LC1Nh_1167 stt3; dolichyl-diphosphooligosaccharide--protein glycosyltransferase	K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21]
D      LC1Nh_0208 dpm1; dolichol-phosphate mannosyltransferase	K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D      LC1Nh_0247 glycosyl transferase group 1	K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D      LC1Nh_0117 glycogen synthase	K00693 GYS; glycogen synthase [EC:2.4.1.11]
D      LC1Nh_0206 glycosyl transferase family 2, poly-beta-1,6 N-acetyl-D-glucosamine synthase	K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C    01005 Lipopolysaccharide biosynthesis proteins
C    01011 Peptidoglycan biosynthesis and degradation proteins [BR:ncon01011]
D      LC1Nh_0615 bacA; undecaprenyl-diphosphatase	K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D      LC1Nh_0672 bcrC; undecaprenyl-diphosphatase	K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C    01004 Lipid biosynthesis proteins [BR:ncon01004]
D      LC1Nh_0059 acdA; acetate-CoA ligase (ADP-forming) subunit alpha	K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
C    01008 Polyketide biosynthesis proteins
C    01006 Prenyltransferases
C    01007 Amino acid related enzymes [BR:ncon01007]
D      LC1Nh_0525 lysK; lysyl-tRNA synthetase, class I	K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D      LC1Nh_0342 gltX; glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      LC1Nh_0086 tyrS; tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      LC1Nh_0192 trpS; tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      LC1Nh_0411 cysS; cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      LC1Nh_0989 argS; arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      LC1Nh_0387 metG; methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      LC1Nh_0405 ileS; isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      LC1Nh_0381 valS; valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      LC1Nh_0108 leuS; leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      LC1Nh_0539 lysS; lysyl-tRNA synthetase, class II	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      LC1Nh_0619 hisS; histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      LC1Nh_0187 glyS; glycyl-tRNA synthetase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      LC1Nh_0083 serS; seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      LC1Nh_0460 proS; prolyl-tRNA synthetase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      LC1Nh_0521 proS2; prolyl-tRNA synthetase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      LC1Nh_0238 thrS; threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      LC1Nh_0094 alaS; alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      LC1Nh_0194 pheS; phenylalanyl-tRNA synthetase alpha chain	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      LC1Nh_0195 pheT; phenylalanyl-tRNA synthetase beta chain	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      LC1Nh_0076 aspB; aspartate aminotransferase	K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C    00199 Cytochrome P450
C    00194 Photosynthesis proteins
B
B  09182 Protein families: genetic information processing
C    03000 Transcription factors [BR:ncon03000]
D      LC1Nh_1012 dcm; DNA (cytosine-5)-methyltransferase 1	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      LC1Nh_0857 tbp; transcription initiation factor TFIID TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      LC1Nh_0655 hypothetical protein	K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D      LC1Nh_0661 hypothetical protein	K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator
D      LC1Nh_0850 trmB; TrmB family transcriptional regulator	K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D      LC1Nh_0701 transcriptional regulator	K07729 K07729; putative transcriptional regulator
D      LC1Nh_0012 nikR; CopG family transcriptional regulator, nickel-responsive regulator	K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
D      LC1Nh_0498 nrdR; transcriptional regulator NrdR	K07738 nrdR; transcriptional repressor NrdR
C    03021 Transcription machinery [BR:ncon03021]
D      LC1Nh_0530 tfb; transcription initiation factor TFIIB	K03124 TFIIB; transcription initiation factor TFIIB
D      LC1Nh_0840 tfb2; transcription initiation factor TFIIB	K03124 TFIIB; transcription initiation factor TFIIB
D      LC1Nh_0857 tbp; transcription initiation factor TFIID TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
D      LC1Nh_0307 DNA excision repair protein ERCC-3	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      LC1Nh_0270 DNA excision repair protein ERCC-2 (helicase)	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      LC1Nh_0779 rpoE2; DNA-directed RNA polymerase subunit E''	K15171 SUPT4H1; transcription elongation factor SPT4
D      LC1Nh_0102 nusG; transcriptional antiterminator NusG	K15172 SUPT5H; transcription elongation factor SPT5
D      LC1Nh_0894 nusA2; transcription elongation factor NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      LC1Nh_0892 rpoA1; DNA-directed RNA polymerase subunit A'	K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6]
D      LC1Nh_0893 rpoA2; DNA-directed RNA polymerase subunit A''	K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6]
D      LC1Nh_0890 rpoB2; DNA-directed RNA polymerase subunit B''	K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]
D      LC1Nh_1072 rpoD; DNA-directed RNA polymerase subunit D	K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6]
D      LC1Nh_0780 rpoE1; DNA-directed RNA polymerase subunit E'	K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6]
D      LC1Nh_0440 rpoF; DNA-directed RNA polymerase subunit F	K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6]
D      LC1Nh_0889 rpoH; DNA-directed RNA polymerase subunit H	K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
D      LC1Nh_0283 rpoK; DNA-directed RNA polymerase subunit K	K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6]
D      LC1Nh_0303 rpoL; DNA-directed RNA polymerase subunit L	K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6]
D      LC1Nh_1047 rpoN; DNA-directed RNA polymerase subunit N	K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6]
D      LC1Nh_0562 rpoP; DNA-directed RNA polymerase subunit P	K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
D      LC1Nh_0299 tfs; transcription termination factor TFS	K03057 tfs; transcription factor S
C    03019 Messenger RNA biogenesis [BR:ncon03019]
D      LC1Nh_0779 rpoE2; DNA-directed RNA polymerase subunit E''	K15171 SUPT4H1; transcription elongation factor SPT4
D      LC1Nh_0102 nusG; transcriptional antiterminator NusG	K15172 SUPT5H; transcription elongation factor SPT5
D      LC1Nh_0068 AAA family ATPase, CDC48 subfamily	K13525 VCP; transitional endoplasmic reticulum ATPase
D      LC1Nh_0910 pelA; mRNA surveillance protein pelota	K06965 PELO; protein pelota
D      LC1Nh_0380 eRF1; peptide chain release factor 1	K03265 ETF1; peptide chain release factor subunit 1
D      LC1Nh_0904 translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      LC1Nh_0558 rrp4; exosome complex component RRP4	K03679 RRP4; exosome complex component RRP4
D      LC1Nh_0559 rrp41; exosome complex component RRP41	K11600 RRP41; exosome complex component RRP41
D      LC1Nh_0560 rrp42; exosome complex component RRP42	K12589 RRP42; exosome complex component RRP42
D      LC1Nh_0327 rnj; ribonuclease J	K12574 rnj; ribonuclease J [EC:3.1.-.-]
D      LC1Nh_0471 deaD2; ATP-dependent RNA helicase DeaD	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      LC1Nh_0282 eno; enolase, C-terminal TIM barrel domain	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      LC1Nh_0042 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
C    03041 Spliceosome
C    03011 Ribosome [BR:ncon03011]
D      LC1Nh_0757 rps3ae; 30S ribosomal protein S3Ae	K02984 RP-S3Ae; small subunit ribosomal protein S3Ae
D      LC1Nh_1104 rps4e; 30S ribosomal protein S4e	K02987 RP-S4e; small subunit ribosomal protein S4e
D      LC1Nh_0790 rps6e; 30S ribosomal protein S6e	K02991 RP-S6e; small subunit ribosomal protein S6e
D      LC1Nh_0875 rps8e; 30S ribosomal protein S8e	K02995 RP-S8e; small subunit ribosomal protein S8e
D      LC1Nh_0390 rps17e; 30S ribosomal protein S17e	K02962 RP-S17e; small subunit ribosomal protein S17e
D      LC1Nh_0236 rps19e; 30S ribosomal protein S19e	K02966 RP-S19e; small subunit ribosomal protein S19e
D      LC1Nh_0778 rps24e; 30S ribosomal protein S24e	K02974 RP-S24e; small subunit ribosomal protein S24e
D      LC1Nh_0287 rps27e; 30S ribosomal protein S27e	K02978 RP-S27e; small subunit ribosomal protein S27e
D      LC1Nh_0777 rps27ae; 30S ribosomal protein S27ae	K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D      LC1Nh_0275 rps28e; 30S ribosomal protein S28e	K02979 RP-S28e; small subunit ribosomal protein S28e
D      LC1Nh_1120 rpl4p; 50S ribosomal protein L4	K02930 RP-L4e; large subunit ribosomal protein L4e
D      LC1Nh_0276 rpl7ae; 50S ribosomal protein L7Ae	K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D      LC1Nh_1146 rpl10e; 50S ribosomal protein L10e	K02866 RP-L10e; large subunit ribosomal protein L10e
D      LC1Nh_0854 rpl15e; 50S ribosomal protein L15e	K02877 RP-L15e; large subunit ribosomal protein L15e
D      LC1Nh_1050 rpl18e; 50S ribosomal protein L18e	K02883 RP-L18e; large subunit ribosomal protein L18e
D      LC1Nh_1098 rpl19e; 50S ribosomal protein L19e	K02885 RP-L19e; large subunit ribosomal protein L19e
D      LC1Nh_0439 rpl21e; 50S ribosomal protein L21e	K02889 RP-L21e; large subunit ribosomal protein L21e
D      LC1Nh_0274 rpl24e; 50S ribosomal protein L24e	K02896 RP-L24e; large subunit ribosomal protein L24e
D      LC1Nh_1099 rpl32e; 50S ribosomal protein L32e	K02912 RP-L32e; large subunit ribosomal protein L32e
D      LC1Nh_0877 rpl37e; 50S ribosomal protein L37e	K02922 RP-L37e; large subunit ribosomal protein L37e
D      LC1Nh_0561 rpl37ae; 50S ribosomal protein L37Ae	K02921 RP-L37Ae; large subunit ribosomal protein L37Ae
D      LC1Nh_0234 rpl39e; 50S ribosomal protein L39e	K02924 RP-L39e; large subunit ribosomal protein L39e
D      LC1Nh_0613 rpl40e; 50S ribosomal protein L40e	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D      LC1Nh_0288 rpl44e; 50S ribosomal protein L44e	K02929 RP-L44e; large subunit ribosomal protein L44e
D      LC1Nh_0279 rps2p; 30S ribosomal protein S2	K02967 RP-S2; small subunit ribosomal protein S2
D      LC1Nh_1115 rps3p; 30S ribosomal protein S3	K02982 RP-S3; small subunit ribosomal protein S3
D      LC1Nh_1074 rps4p; 30S ribosomal protein S4	K02986 RP-S4; small subunit ribosomal protein S4
D      LC1Nh_1096 rps5p; 30S ribosomal protein S5	K02988 RP-S5; small subunit ribosomal protein S5
D      LC1Nh_0897 rps7p; 30S ribosomal protein S7	K02992 RP-S7; small subunit ribosomal protein S7
D      LC1Nh_1101 rps8p; 30S ribosomal protein S8	K02994 RP-S8; small subunit ribosomal protein S8
D      LC1Nh_1048 rps9p; 30S Ribosomal protein S9	K02996 RP-S9; small subunit ribosomal protein S9
D      LC1Nh_0906 rps10p; 30S ribosomal protein S10	K02946 RP-S10; small subunit ribosomal protein S10
D      LC1Nh_1073 rps11p; 30S ribosomal protein S11	K02948 RP-S11; small subunit ribosomal protein S11
D      LC1Nh_0896 rps12p; 30S ribosomal protein S12	K02950 RP-S12; small subunit ribosomal protein S12
D      LC1Nh_1075 rps13p; 30S ribosomal protein S13	K02952 RP-S13; small subunit ribosomal protein S13
D      LC1Nh_1102 rps14p; 30S ribosomal protein S14	K02954 RP-S14; small subunit ribosomal protein S14
D      LC1Nh_0765 rps15p; 30S ribosomal protein S15	K02956 RP-S15; small subunit ribosomal protein S15
D      LC1Nh_1107 rps17p; 30S ribosomal protein S17	K02961 RP-S17; small subunit ribosomal protein S17
D      LC1Nh_1117 rps19p; 30S ribosomal protein S19	K02965 RP-S19; small subunit ribosomal protein S19
D      LC1Nh_0100 rpl1p; 50S ribosomal protein L1	K02863 RP-L1; large subunit ribosomal protein L1
D      LC1Nh_1118 rpl2p; 50S ribosomal protein L2	K02886 RP-L2; large subunit ribosomal protein L2
D      LC1Nh_1121 rpl3p; 50S ribosomal protein L3	K02906 RP-L3; large subunit ribosomal protein L3
D      LC1Nh_1103 rpl5p; 50S ribosomal protein L5	K02931 RP-L5; large subunit ribosomal protein L5
D      LC1Nh_1100 rpl6p; 50S ribosomal protein L6	K02933 RP-L6; large subunit ribosomal protein L6
D      LC1Nh_0099 rpl10p; 50S ribosomal protein L10	K02864 RP-L10; large subunit ribosomal protein L10
D      LC1Nh_0101 rpl11p; 50S ribosomal protein L11	K02867 RP-L11; large subunit ribosomal protein L11
D      LC1Nh_1049 rpl13p; 50S ribosomal protein L13	K02871 RP-L13; large subunit ribosomal protein L13
D      LC1Nh_1106 rpl14p; 50S ribosomal protein L14	K02874 RP-L14; large subunit ribosomal protein L14
D      LC1Nh_1094 rpl15p; 50S ribosomal protein L15	K02876 RP-L15; large subunit ribosomal protein L15
D      LC1Nh_1097 rpl18p; 50S ribosomal protein L18	K02881 RP-L18; large subunit ribosomal protein L18
D      LC1Nh_1116 rpl22p; 50S ribosomal protein L22	K02890 RP-L22; large subunit ribosomal protein L22
D      LC1Nh_1119 rpl23p; 50S ribosomal protein L23	K02892 RP-L23; large subunit ribosomal protein L23
D      LC1Nh_1114 rpl29p; 50S ribosomal protein L29	K02904 RP-L29; large subunit ribosomal protein L29
D      LC1Nh_1095 rpl30p; 50S ribosomal protein L30	K02907 RP-L30; large subunit ribosomal protein L30
D      LC1Nh_0096 rpl12p; 50S ribosomal protein L12	K02869 RP-L12; large subunit ribosomal protein L12
D      LC1Nh_0660 rpl18a; 50S ribosomal protein L18a	K02944 RP-LX; large subunit ribosomal protein LX
C    03009 Ribosome biogenesis [BR:ncon03009]
D      LC1Nh_0253 nop56; rRNA biogenesis protein Nop56/Nop58	K14564 NOP56; nucleolar protein 56
D      LC1Nh_0968 krr1; ribosomal RNA assembly protein	K06961 KRR1; ribosomal RNA assembly protein
D      LC1Nh_0967 rio1; serine/threonine protein kinase	K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D      LC1Nh_0358 adenylate kinase	K18532 AK6; adenylate kinase [EC:2.7.4.3]
D      LC1Nh_0393 rli1; ribosome biogenesis/translation initiation ATPase RLI	K06174 ABCE1; ATP-binding cassette, sub-family E, member 1
D      LC1Nh_1108 pop4; ribonuclease P protein subunit POP4 (Rpp29)	K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D      LC1Nh_0856 pop5; ribonuclease P/MRP protein subunit POP5	K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D      LC1Nh_0855 rrp1; ribonuclease P/MRP protein subunit RPP1	K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D      LC1Nh_0233 eif6; translation initiation factor 6	K03264 EIF6; translation initiation factor 6
D      LC1Nh_0965 nmd3; NMD protein affecting ribosome stability and mRNA decay	K07562 NMD3; 60S ribosomal export protein NMD3
D      LC1Nh_0556 sdo1; ribosome maturation protein SDO1	K14574 SDO1; ribosome maturation protein SDO1
D      LC1Nh_0068 AAA family ATPase, CDC48 subfamily	K13525 VCP; transitional endoplasmic reticulum ATPase
D      LC1Nh_0746 GTP-binding protein	K03595 era; GTPase
D      LC1Nh_0255 flpA; fibrillarin-like pre-rRNA processing protein	K04795 flpA; fibrillarin-like pre-rRNA processing protein
D      LC1Nh_0276 rpl7ae; 50S ribosomal protein L7Ae	K02936 RP-L7Ae; large subunit ribosomal protein L7Ae
D      LC1Nh_0894 nusA2; transcription elongation factor NusA	K02600 nusA; transcription termination/antitermination protein NusA
D      LC1Nh_1143 hypothetical protein	K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D      LC1Nh_0442 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase	K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D      LC1Nh_1112 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase	K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D      LC1Nh_0786 rimK; ribosomal protein S6--L-glutamate ligase	K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D      LC1Nh_0787 rimK2; ribosomal protein S6--L-glutamate ligase	K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D      LC1Nh_0471 deaD2; ATP-dependent RNA helicase DeaD	K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D      LC1Nh_0773 sua5; L-threonylcarbamoyladenylate synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      LC1Nh_0623 ychF; ribosome-binding ATPase	K06942 ychF; ribosome-binding ATPase
C    03016 Transfer RNA biogenesis [BR:ncon03016]
D      LC1Nh_1108 pop4; ribonuclease P protein subunit POP4 (Rpp29)	K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D      LC1Nh_0856 pop5; ribonuclease P/MRP protein subunit POP5	K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D      LC1Nh_0855 rrp1; ribonuclease P/MRP protein subunit RPP1	K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D      LC1Nh_0246 rpr2; ribonuclease P protein subunit RPR2	K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D      LC1Nh_0242 rnz; ribonuclease Z	K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D      LC1Nh_1125 rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase)	K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D      LC1Nh_1126 archease	K24956 ZBTB8OS; protein archease
D      LC1Nh_0904 translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      LC1Nh_0342 gltX; glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D      LC1Nh_0460 proS; prolyl-tRNA synthetase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      LC1Nh_0521 proS2; prolyl-tRNA synthetase	K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D      LC1Nh_0405 ileS; isoleucyl-tRNA synthetase	K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D      LC1Nh_0108 leuS; leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      LC1Nh_0387 metG; methionyl-tRNA synthetase	K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D      LC1Nh_0989 argS; arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      LC1Nh_0539 lysS; lysyl-tRNA synthetase, class II	K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D      LC1Nh_0094 alaS; alanyl-tRNA synthetase	K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D      LC1Nh_0187 glyS; glycyl-tRNA synthetase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      LC1Nh_0238 thrS; threonyl-tRNA synthetase	K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D      LC1Nh_0083 serS; seryl-tRNA synthetase	K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D      LC1Nh_0411 cysS; cysteinyl-tRNA synthetase	K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D      LC1Nh_0381 valS; valyl-tRNA synthetase	K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D      LC1Nh_0619 hisS; histidyl-tRNA synthetase	K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D      LC1Nh_0194 pheS; phenylalanyl-tRNA synthetase alpha chain	K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D      LC1Nh_0195 pheT; phenylalanyl-tRNA synthetase beta chain	K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D      LC1Nh_0086 tyrS; tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      LC1Nh_0192 trpS; tryptophanyl-tRNA synthetase	K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D      LC1Nh_0720 hypothetical protein	K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D      LC1Nh_0577 hit2; histidine triad (HIT) family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      LC1Nh_1042 hit3; histidine triad (HIT) family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      LC1Nh_0838 trm1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase	K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D      LC1Nh_0922 trm5; tRNA (guanine37-N1)-methyltransferase	K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D      LC1Nh_1091 truB; RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5	K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D      LC1Nh_0204 truD; tRNA pseudouridine13 synthase	K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D      LC1Nh_0437 pus10; tRNA pseudouridine synthase 10	K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D      LC1Nh_0770 kae1-bud32; bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32	K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D      LC1Nh_0775 bifunctional N6-L-threonylcarbamoyladenine synthase / protein kinase Bud32	K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D      LC1Nh_0848 elp3; histone acetyltransferase, ELP3 family	K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D      LC1Nh_0773 sua5; L-threonylcarbamoyladenylate synthase	K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D      LC1Nh_0844 cca; tRNA nucleotidyltransferase (CCA-adding enzyme)	K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72]
D      LC1Nh_0184 endA; tRNA-intron endonuclease	K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
D      LC1Nh_0026 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase	K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D      LC1Nh_0525 lysK; lysyl-tRNA synthetase, class I	K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D      LC1Nh_0451 lasT; tRNA/rRNA methyltransferase	K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D      LC1Nh_0244 trmG10; tRNA (guanine10-N2)-dimethyltransferase	K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213]
D      LC1Nh_0240 atrm56; tRNA (cytidine56-2'-O)-methyltransferase	K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206]
D      LC1Nh_0686 rsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family	K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-]
D      LC1Nh_0137 vapC; tRNA(fMet)-specific endonuclease VapC	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D      LC1Nh_0426 vapC3; tRNA(fMet)-specific endonuclease VapC	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D      LC1Nh_0901 vapC4; tRNA(fMet)-specific endonuclease VapC	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C    03012 Translation factors [BR:ncon03012]
D      LC1Nh_0966 aIF-1A; translation initiation factor 1A	K03236 EIF1A; translation initiation factor 1A
D      LC1Nh_1113 translation initiation factor Sui1	K03113 EIF1; translation initiation factor 1
D      LC1Nh_0285 translation initiation factor IF-2 subunit alpha	K03237 EIF2S1; translation initiation factor 2 subunit 1
D      LC1Nh_0867 translation initiation factor IF-2 subunit beta	K03238 EIF2S2; translation initiation factor 2 subunit 2
D      LC1Nh_0789 translation initiation factor IF-2 subunit gamma	K03242 EIF2S3; translation initiation factor 2 subunit 3
D      LC1Nh_0843 eif5A; translation initiation factor eIF-5A	K03263 EIF5A; translation initiation factor 5A
D      LC1Nh_0273 translation initiation factor IF-2 (5B)	K03243 EIF5B; translation initiation factor 5B
D      LC1Nh_0233 eif6; translation initiation factor 6	K03264 EIF6; translation initiation factor 6
D      LC1Nh_0904 translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      LC1Nh_0958 elongation factor 1-beta	K03232 EEF1B; elongation factor 1-beta
D      LC1Nh_0899 translation elongation factor aEF-2	K03234 EEF2; elongation factor 2
D      LC1Nh_1144 dph2; 2-(3-amino-3-carboxypropyl)histidine synthase	K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]
D      LC1Nh_0884 asnB; asparagine synthase (glutamine-hydrolysing)	K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14]
D      LC1Nh_0380 eRF1; peptide chain release factor 1	K03265 ETF1; peptide chain release factor subunit 1
D      LC1Nh_0447 hemK; release factor glutamine methyltransferase	K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D      LC1Nh_0203 pth2; peptidyl-tRNA hydrolase, PTH2 family	K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]
C    03110 Chaperones and folding catalysts [BR:ncon03110]
D      LC1Nh_0042 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      LC1Nh_0343 chaperonin GroEL, HSP60 family / thermosome subunit	K22447 cct; archaeal chaperonin
D      LC1Nh_0040 dnaJ; molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
D      LC1Nh_0044 grpE; molecular chaperone GrpE	K03687 GRPE; molecular chaperone GrpE
D      LC1Nh_0090 hsp20; molecular chaperone IbpA, HSP20 family	K13993 HSP20; HSP20 family protein
D      LC1Nh_0659 pfdA; prefoldin alpha subunit	K04797 pfdA; prefoldin alpha subunit
D      LC1Nh_0564 pfdB; prefoldin beta subunit	K04798 pfdB; prefoldin beta subunit
D      LC1Nh_0178 hypA; hydrogenase nickel incorporation protein HypA/HybF	K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D      LC1Nh_1076 ppiC; peptidyl-prolyl cis-trans isomerase C	K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D      LC1Nh_0362 trxA; thioredoxin	K03671 TXN; thioredoxin
D      LC1Nh_0828 glutaredoxin	K03676 grxC; glutaredoxin 3
C    04131 Membrane trafficking [BR:ncon04131]
D      LC1Nh_0198 ndk; nucleoside-diphosphate kinase	K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D      LC1Nh_0068 AAA family ATPase, CDC48 subfamily	K13525 VCP; transitional endoplasmic reticulum ATPase
D      LC1Nh_0103 secE; protein translocase SEC61 complex gamma subunit	K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D      LC1Nh_0586 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      LC1Nh_0904 translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
C    04121 Ubiquitin system [BR:ncon04121]
D      LC1Nh_0613 rpl40e; 50S ribosomal protein L40e	K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e
D      LC1Nh_0777 rps27ae; 30S ribosomal protein S27ae	K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
C    03051 Proteasome [BR:ncon03051]
D      LC1Nh_0554 psmA; proteasome alpha subunit	K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D      LC1Nh_0475 psmB; proteasome beta subunit	K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D      LC1Nh_0585 rpt1; ATP-dependent 26S proteasome regulatory subunit	K03420 psmR; proteasome regulatory subunit
C    03032 DNA replication proteins [BR:ncon03032]
D      LC1Nh_0296 pcnA; DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      LC1Nh_0957 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      LC1Nh_0852 lig1; DNA ligase 1	K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D      LC1Nh_1012 dcm; DNA (cytosine-5)-methyltransferase 1	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      LC1Nh_0001 cdc6; cell division control protein Cdc6	K10725 cdc6A; archaeal cell division control protein 6
D      LC1Nh_0861 mcm; replicative DNA helicase Mcm	K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3]
D      LC1Nh_0293 ginS; DNA replication factor GINS	K09723 ginS; DNA replication factor GINS
D      LC1Nh_0183 rnhB; ribonuclease HII	K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D      LC1Nh_0050 polB2; archaeal DNA polymerase I	K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7]
D      LC1Nh_0003 polC; DNA polymerase II large subunit	K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7]
D      LC1Nh_0002 polB; DNA polymerase II small subunit	K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7]
D      LC1Nh_0356 rfcL; replication factor C large subunit	K04800 rfcL; replication factor C large subunit
D      LC1Nh_0357 rfcS; replication factor C small subunit	K04801 rfcS; replication factor C small subunit
D      LC1Nh_0970 top6A; DNA topoisomerase VI subunit A	K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2]
D      LC1Nh_0969 top6B; DNA topoisomerase VI subunit B	K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2]
D      LC1Nh_0080 topA; DNA topoisomerase I	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C    03036 Chromosome and associated proteins [BR:ncon03036]
D      LC1Nh_1012 dcm; DNA (cytosine-5)-methyltransferase 1	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      LC1Nh_0021 archaeal histone H3/H4	K24450 hmf; DNA-binding protein
D      LC1Nh_0049 archaeal histone H3/H4	K24450 hmf; DNA-binding protein
D      LC1Nh_0842 archaeal histone H3/H4	K24450 hmf; DNA-binding protein
D      LC1Nh_0166 smc; chromosome segregation protein	K03529 smc; chromosome segregation protein
D      LC1Nh_0165 scpA; segregation and condensation protein A	K05896 scpA; segregation and condensation protein A
D      LC1Nh_0164 scpB; segregation and condensation protein B	K06024 scpB; segregation and condensation protein B
D      LC1Nh_0105 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      LC1Nh_0396 ftsZ2; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      LC1Nh_0109 minD; septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
D      LC1Nh_0110 minD2; septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
D      LC1Nh_0230 minD3; septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
C    03400 DNA repair and recombination proteins [BR:ncon03400]
D      LC1Nh_0794 phrB; deoxyribodipyrimidine photo-lyase	K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D      LC1Nh_1164 ogg; 3-methyladenine DNA glycosylase/8-oxoguanine DNAglycosylase	K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D      LC1Nh_0334 nth; endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      LC1Nh_0871 nth2; endonuclease III	K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D      LC1Nh_0296 pcnA; DNA polymerase sliding clamp	K04802 PCNA; proliferating cell nuclear antigen
D      LC1Nh_0957 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      LC1Nh_0852 lig1; DNA ligase 1	K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D      LC1Nh_0307 DNA excision repair protein ERCC-3	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D      LC1Nh_0270 DNA excision repair protein ERCC-2 (helicase)	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D      LC1Nh_0392 mutT; 8-oxo-dGTP diphosphatase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      LC1Nh_0413 mutT2; 8-oxo-dGTP diphosphatase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      LC1Nh_0597 hypothetical protein	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      LC1Nh_0681 mutT3; 8-oxo-dGTP diphosphatase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      LC1Nh_0812 mutT4; 8-oxo-dGTP diphosphatase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      LC1Nh_0882 mth1; 8-oxo-dGTP diphosphatase / 2-hydroxy-dATP diphosphatase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      LC1Nh_1044 mutT5; 8-oxo-dGTP diphosphatase	K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D      LC1Nh_0172 dut; dUTP pyrophosphatase	K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D      LC1Nh_0331 deoxyribodipyrimidine photolyase-related protein	K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D      LC1Nh_0688 udg; uracil-DNA glycosylase	K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D      LC1Nh_0507 nfo; deoxyribonuclease IV	K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D      LC1Nh_0761 recJ2; single-stranded-DNA-specific exonuclease RecJ	K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D      LC1Nh_0604 uvrD; DNA helicase II / ATP-dependent DNA helicase PcrA	K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D      LC1Nh_0023 radA; DNA repair and recombination protein RadA	K04483 radA; DNA repair protein RadA
D      LC1Nh_0070 radB; DNA repair protein RadB	K04484 radB; DNA repair protein RadB
D      LC1Nh_0152 brr2; superfamily II helicase	K03726 helS; ATP-dependent DNA helicase [EC:5.6.2.4]
D      LC1Nh_0080 topA; DNA topoisomerase I	K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D      LC1Nh_0477 dbh; DNA polymerase IV	K04479 dbh; DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]
D      LC1Nh_0368 lhr; ATP-dependent helicase Lhr and Lhr-like helicase	K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D      LC1Nh_0497 nrdA; ribonucleoside-diphosphate reductase alpha chain	K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D      LC1Nh_0272 nreA; DNA repair protein NreA	K22585 nreA; DNA repair protein NreA
C    03029 Mitochondrial biogenesis [BR:ncon03029]
D      LC1Nh_1108 pop4; ribonuclease P protein subunit POP4 (Rpp29)	K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D      LC1Nh_0856 pop5; ribonuclease P/MRP protein subunit POP5	K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D      LC1Nh_0855 rrp1; ribonuclease P/MRP protein subunit RPP1	K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D      LC1Nh_0746 GTP-binding protein	K03595 era; GTPase
D      LC1Nh_0086 tyrS; tyrosyl-tRNA synthetase	K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D      LC1Nh_0108 leuS; leucyl-tRNA synthetase	K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D      LC1Nh_0187 glyS; glycyl-tRNA synthetase	K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D      LC1Nh_0989 argS; arginyl-tRNA synthetase	K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D      LC1Nh_0580 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A	K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D      LC1Nh_0581 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B	K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D      LC1Nh_0397 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C	K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D      LC1Nh_0042 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      LC1Nh_0044 grpE; molecular chaperone GrpE	K03687 GRPE; molecular chaperone GrpE
D      LC1Nh_0040 dnaJ; molecular chaperone DnaJ	K03686 dnaJ; molecular chaperone DnaJ
B
B  09183 Protein families: signaling and cellular processes
C    02000 Transporters [BR:ncon02000]
D      LC1Nh_0508 iron complex transport system substrate-binding protein	K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D      LC1Nh_0028 ABC transport system ATP-binding protein	K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D      LC1Nh_0316 ABC-type uncharacterized transport system, permease component	K25154 evrC; viologen exporter family transport system permease protein
D      LC1Nh_0315 ABC-type uncharacterized transport system, permease component	K25155 evrB; viologen exporter family transport system permease protein
D      LC1Nh_0314 ABC-type uncharacterized transport system, ATPase component	K25156 evrA; viologen exporter family transport system ATP-binding protein
D      LC1Nh_0708 ABC-2 type transport system permease protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      LC1Nh_0764 ABC-2 type transport system permease protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      LC1Nh_1124 ABC-2 type transport system permease protein	K01992 ABC-2.P; ABC-2 type transport system permease protein
D      LC1Nh_0516 ABC transporter ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      LC1Nh_0707 ABC-2 type transport system ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      LC1Nh_0710 ABC-2 type transport system ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      LC1Nh_0763 ABC-2 type transport system ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      LC1Nh_1123 ABC-2 type transport system ATP-binding protein	K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D      LC1Nh_0030 ABC transport system permease protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      LC1Nh_0031 ABC transport system permease protein	K02004 ABC.CD.P; putative ABC transport system permease protein
D      LC1Nh_0267 sufC; Fe-S cluster assembly ATP-binding protein	K09013 sufC; Fe-S cluster assembly ATP-binding protein
D      LC1Nh_0626 Na+/phosphate symporter	K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D      LC1Nh_0263 MATE family efflux transporter	K26937 dinF; MATE family, multidrug efflux pump
D      LC1Nh_0506 hypothetical protein	K02784 ptsH; phosphocarrier protein HPr
D      LC1Nh_0217 yfbK; von Willebrand factor type A / Ca-activated chloride channel-like protein	K07114 yfbK; Ca-activated chloride channel homolog
D      LC1Nh_0365 mscS2; small-conductance mechanosensitive channel	K03442 mscS; small conductance mechanosensitive channel
D      LC1Nh_1038 kefA; potassium-dependent mechanosensitive channel	K03442 mscS; small conductance mechanosensitive channel
D      LC1Nh_0341 mscS; mechanosensitive ion channel protein MscS	K22044 ybiO; moderate conductance mechanosensitive channel
D      LC1Nh_0011 zipB; zinc and cadmium transporter	K16267 zipB; zinc and cadmium transporter
D      LC1Nh_1043 zupT; ZIP family zinc transporter	K07238 TC.ZIP; zinc transporter, ZIP family
D      LC1Nh_0051 yrbG; Ca2+/Na+ antiporter	K07301 yrbG; cation:H+ antiporter
D      LC1Nh_0771 kefB; Kef-type K+ transport system, membrane component KefB	K26735 KEA4_5_6; K+:H+ antiporter
D      LC1Nh_0791 trkG; Trk-type K+ transport system, membrane component	K03498 trkH; trk/ktr system potassium uptake protein
D      LC1Nh_0792 trkA; Trk-type K+ transport system, NAD-binding component	K03499 trkA; trk/ktr system potassium uptake protein
C    02044 Secretion system [BR:ncon02044]
D      LC1Nh_0350 flaI; archaeal flagellar protein FlaI	K07332 flaI; archaeal flagellar protein FlaI
D      LC1Nh_0941 virB11; Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase	K07332 flaI; archaeal flagellar protein FlaI
D      LC1Nh_1130 flaI2; archaeal flagellar protein FlaI	K07332 flaI; archaeal flagellar protein FlaI
D      LC1Nh_0351 flaJ; archaeal flagellar protein FlaJ	K07333 flaJ; archaeal flagellar protein FlaJ
D      LC1Nh_0352 flaJ2; archaeal flagellar protein FlaJ	K07333 flaJ; archaeal flagellar protein FlaJ
D      LC1Nh_1131 flaJ3; archaeal flagellar protein FlaJ	K07333 flaJ; archaeal flagellar protein FlaJ
D      LC1Nh_1169 secD; preprotein translocase subunit SecD	K03072 secD; preprotein translocase subunit SecD
D      LC1Nh_1168 secF; preprotein translocase subunit SecF	K03074 secF; preprotein translocase subunit SecF
D      LC1Nh_1093 secY; preprotein translocase subunit SecY	K03076 secY; preprotein translocase subunit SecY
D      LC1Nh_0652 ffh; signal recognition particle subunit SRP54	K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D      LC1Nh_0658 ftsY; fused signal recognition particle receptor	K03110 ftsY; fused signal recognition particle receptor
D      LC1Nh_0103 secE; protein translocase SEC61 complex gamma subunit	K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
D      LC1Nh_0432 tatA; sec-independent protein translocase protein TatA	K03116 tatA; sec-independent protein translocase protein TatA
D      LC1Nh_0433 tatC; sec-independent protein translocase protein TatC	K03118 tatC; sec-independent protein translocase protein TatC
C    02042 Bacterial toxins
C    02022 Two-component system
C    02035 Bacterial motility proteins [BR:ncon02035]
D      LC1Nh_0350 flaI; archaeal flagellar protein FlaI	K07332 flaI; archaeal flagellar protein FlaI
D      LC1Nh_0941 virB11; Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase	K07332 flaI; archaeal flagellar protein FlaI
D      LC1Nh_1130 flaI2; archaeal flagellar protein FlaI	K07332 flaI; archaeal flagellar protein FlaI
D      LC1Nh_0351 flaJ; archaeal flagellar protein FlaJ	K07333 flaJ; archaeal flagellar protein FlaJ
D      LC1Nh_0352 flaJ2; archaeal flagellar protein FlaJ	K07333 flaJ; archaeal flagellar protein FlaJ
D      LC1Nh_1131 flaJ3; archaeal flagellar protein FlaJ	K07333 flaJ; archaeal flagellar protein FlaJ
C    03037 Cilium and associated proteins
C    04812 Cytoskeleton proteins [BR:ncon04812]
D      LC1Nh_0105 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      LC1Nh_0396 ftsZ2; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      LC1Nh_0109 minD; septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
D      LC1Nh_0110 minD2; septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
D      LC1Nh_0230 minD3; septum site-determining protein MinD	K03609 minD; septum site-determining protein MinD
C    04147 Exosome [BR:ncon04147]
D      LC1Nh_0282 eno; enolase, C-terminal TIM barrel domain	K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D      LC1Nh_0188 pgk; phosphoglycerate kinase	K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D      LC1Nh_0586 pyk; pyruvate kinase	K00873 PK; pyruvate kinase [EC:2.7.1.40]
D      LC1Nh_0904 translation elongation factor EF-1 subunit alpha	K03231 EEF1A; elongation factor 1-alpha
D      LC1Nh_0899 translation elongation factor aEF-2	K03234 EEF2; elongation factor 2
D      LC1Nh_0042 dnaK; molecular chaperone DnaK	K04043 dnaK; molecular chaperone DnaK
D      LC1Nh_0118 pgi; glucose-6-phosphate isomerase	K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D      LC1Nh_0957 flap endonuclease-1	K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
D      LC1Nh_0777 rps27ae; 30S ribosomal protein S27ae	K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae
D      LC1Nh_0068 AAA family ATPase, CDC48 subfamily	K13525 VCP; transitional endoplasmic reticulum ATPase
D      LC1Nh_0577 hit2; histidine triad (HIT) family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      LC1Nh_1042 hit3; histidine triad (HIT) family protein	K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D      LC1Nh_0626 Na+/phosphate symporter	K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D      LC1Nh_0845 adk; adenylate kinase	K00939 adk; adenylate kinase [EC:2.7.4.3]
D      LC1Nh_0150 fbp; fructose-1,6-bisphosphatase I	K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D      LC1Nh_0691 phhB; 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      LC1Nh_0860 phhB2; 4a-hydroxytetrahydrobiopterin dehydratase	K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D      LC1Nh_0054 lpd; pyruvate dehydrogenase E3 component (dihydrolipoamide dehydrogenase)	K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D      LC1Nh_0115 tpiA; triosephosphate isomerase (TIM)	K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C    02048 Prokaryotic defense system [BR:ncon02048]
D      LC1Nh_0996 hsdR; type I restriction endonuclease subunit R	K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D      LC1Nh_0997 hsdS; type I restriction endonuclease subunit S	K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D      LC1Nh_0998 hsdM; type I restriction endonuclease subunit M	K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D      LC1Nh_1012 dcm; DNA (cytosine-5)-methyltransferase 1	K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D      LC1Nh_0128 hypothetical protein	K06218 relE; mRNA interferase RelE/StbE
D      LC1Nh_0302 relE; addiction module toxin, RelE/StbE family	K06218 relE; mRNA interferase RelE/StbE
D      LC1Nh_0462 hypothetical protein	K06218 relE; mRNA interferase RelE/StbE
D      LC1Nh_0523 relE2; mRNA interferase RelE/StbE	K06218 relE; mRNA interferase RelE/StbE
D      LC1Nh_0862 relE3; mRNA interferase RelE/StbE	K06218 relE; mRNA interferase RelE/StbE
D      LC1Nh_1065 hypothetical protein	K06218 relE; mRNA interferase RelE/StbE
D      LC1Nh_1202 hypothetical protein	K06218 relE; mRNA interferase RelE/StbE
D      LC1Nh_0138 hypothetical protein	K07746 parD1_3_4; antitoxin ParD1/3/4
D      LC1Nh_0458 type II toxin-antitoxin system ParD family antitoxin	K07746 parD1_3_4; antitoxin ParD1/3/4
D      LC1Nh_0766 CopG family transcriptional regulator	K07746 parD1_3_4; antitoxin ParD1/3/4
D      LC1Nh_0863 transcriptional regulator	K07746 parD1_3_4; antitoxin ParD1/3/4
D      LC1Nh_0902 antitoxin ParD1/3/4	K07746 parD1_3_4; antitoxin ParD1/3/4
D      LC1Nh_0555 doc2; death-on-curing family protein	K07341 doc; death on curing protein
D      LC1Nh_0137 vapC; tRNA(fMet)-specific endonuclease VapC	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D      LC1Nh_0426 vapC3; tRNA(fMet)-specific endonuclease VapC	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D      LC1Nh_0901 vapC4; tRNA(fMet)-specific endonuclease VapC	K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D      LC1Nh_0105 ftsZ; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      LC1Nh_0396 ftsZ2; cell division protein FtsZ	K03531 ftsZ; cell division protein FtsZ
D      LC1Nh_0342 gltX; glutamyl-tRNA synthetase	K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C    04030 G protein-coupled receptors
C    04050 Cytokine receptors
C    04054 Pattern recognition receptors
C    03310 Nuclear receptors
C    04040 Ion channels
C    04031 GTP-binding proteins
C    04052 Cytokines and neuropeptides
C    04515 Cell adhesion molecules
C    04090 CD molecules
C    01504 Antimicrobial resistance genes
C    00535 Proteoglycans
C    00536 Glycosaminoglycan binding proteins
C    00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C    04091 Lectins
C    04990 Domain-containing proteins not elsewhere classified
B
B  09185 Viral protein families
C    03200 Viral proteins
C    03210 Viral fusion proteins
B
B  09184 RNA family
C    03100 Non-coding RNAs [BR:ncon03100]
D      LC1Nh_1041 tRNA-Glu	K14224 tRNA-Glu; tRNA Glu
D      LC1Nh_0986 tRNA-Phe	K14231 tRNA-Phe; tRNA Phe
#
A09190 Not Included in Pathway or Brite
B
B  09191 Unclassified: metabolism
C    99980 Enzymes with EC numbers
D      LC1Nh_0607 dkgB; 2,5-diketo-D-gluconate reductase B	K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D      LC1Nh_0693 lpd2; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component	K17883 mtr; mycothione reductase [EC:1.8.1.15]
D      LC1Nh_0593 trxB2; thioredoxin reductase (NADPH)	K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D      LC1Nh_0754 msrA; peptide-methionine (S)-S-oxide reductase	K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D      LC1Nh_0961 msrB; peptide-methionine (R)-S-oxide reductase	K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D      LC1Nh_0280 hypothetical protein	K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D      LC1Nh_0142 pcm; protein-L-isoaspartate O-methyltransferase	K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D      LC1Nh_0925 dph5; diphthine synthase	K20215 dph5; diphthine synthase [EC:2.1.1.98]
D      LC1Nh_1178 fmt; methionyl-tRNA formyltransferase	K22885 K22885; dTDP-4-amino-4,6-dideoxyglucose formyltransferase [EC:2.3.1.-]
D      LC1Nh_0984 dys; deoxyhypusine synthase	K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D      LC1Nh_0126 brt; RNA-dependent DNA polymerase (Reverse transcriptase)	K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D      LC1Nh_0592 tesA; lysophospholipase L1 and related esterases family	K23978 IAH1; isoamyl acetate esterase [EC:3.1.1.112]
D      LC1Nh_0374 tatD; TatD DNase family protein	K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D      LC1Nh_0886 nucS; endonuclease	K07503 nucS; endonuclease [EC:3.1.-.-]
D      LC1Nh_0286 nudI; nucleoside triphosphatase	K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-]
D      LC1Nh_0221 moxR; MoxR-like ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      LC1Nh_0805 moxR2; MoxR-like ATPase	K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D      LC1Nh_0167 ydeN; putative esterase of the alpha/beta hydrolase fold	K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D      LC1Nh_0139 nnr; ADP-dependent NAD(P)H-hydrate dehydratase	K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D      LC1Nh_1022 copB; copper-translocating P-type ATPase	K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D      LC1Nh_0696 Ca2+/Mg2+-transporting ATPase	K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
C    99981 Carbohydrate metabolism
C    99982 Energy metabolism
D      LC1Nh_0266 nifU; SUF system FeS assembly protein, NifU family	K04488 iscU; nitrogen fixation protein NifU and related proteins
C    99983 Lipid metabolism
C    99984 Nucleotide metabolism
C    99985 Amino acid metabolism
C    99986 Glycan metabolism
D      LC1Nh_0239 lysylphosphatidylglycerol synthase TM region / glycosyltransferase 2 family protein	K07027 K07027; glycosyltransferase 2 family protein
D      LC1Nh_0245 lysylphosphatidylglycerol synthase TM region / glycosyltransferase 2 family protein	K07027 K07027; glycosyltransferase 2 family protein
C    99987 Cofactor metabolism
D      LC1Nh_0895 ubiB; ubiquinone biosynthesis protein	K03688 ubiB; ubiquinone biosynthesis protein
D      LC1Nh_0728 hypothetical protein	K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
C    99988 Secondary metabolism
C    99999 Others
B
B  09192 Unclassified: genetic information processing
C    99973 Transcription
D      LC1Nh_1156 XRE family transcriptional regulator	K03627 MBF1; putative transcription factor
D      LC1Nh_0951 albA; archaea-specific DNA-binding protein	K03622 ssh10b; archaea-specific DNA-binding protein
D      LC1Nh_0611 cspA; cold shock protein (beta-ribbon, CspA family)	K03704 cspA; cold shock protein
D      LC1Nh_0648 cspA2; cold shock protein, CspA family	K03704 cspA; cold shock protein
D      LC1Nh_0876 small nuclear ribonucleoprotein	K04796 RUXX; small nuclear ribonucleoprotein
C    99974 Translation
D      LC1Nh_0441 putative nucleotide binding protein	K07572 K07572; putative nucleotide binding protein
D      LC1Nh_0643 mRNA cleavage and polyadenylation specificity factor-like protein	K07577 K07577; putative mRNA 3-end processing factor
D      LC1Nh_0304 putative methylase	K07579 K07579; putative methylase
C    99975 Protein processing
C    99976 Replication and repair
D      LC1Nh_0888 radC; DNA repair protein RadC	K03630 radC; DNA repair protein RadC
D      LC1Nh_0600 rmuC; DNA recombination protein RmuC	K09760 rmuC; DNA recombination protein RmuC
C    99979 Viral proteins
C    99998 Others
B
B  09193 Unclassified: signaling and cellular processes
C    99977 Transport
C    99978 Cell growth
C    99993 Cell motility
D      LC1Nh_0346 hypothetical protein	K23255 pilA; archaeal type IV pilus assembly protein PilA
D      LC1Nh_1133 hypothetical protein	K23255 pilA; archaeal type IV pilus assembly protein PilA
C    99995 Signaling proteins
D      LC1Nh_0235 DNA-binding protein / programmed cell death protein 5	K06875 PDCD5; programmed cell death protein 5
C    99992 Structural proteins
D      LC1Nh_0061 hypothetical protein	K07285 slp; outer membrane lipoprotein
C    99994 Others
D      LC1Nh_0490 cutA; periplasmic divalent cation tolerance protein	K03926 cutA; periplasmic divalent cation tolerance protein
B
B  09194 Poorly characterized
C    99996 General function prediction only
D      LC1Nh_0677 pqqB; pyrroloquinoline quinone biosynthesis protein B	K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D      LC1Nh_0500 ATPase (PilT family) part of archaella system	K06865 K06865; ATPase
D      LC1Nh_0261 sufB; Fe-S cluster assembly protein SufB	K09014 sufB; Fe-S cluster assembly protein SufB
D      LC1Nh_0262 sufD; Fe-S cluster assembly protein SufD	K09015 sufD; Fe-S cluster assembly protein SufD
D      LC1Nh_0036 fxsA; FxsA domain protein	K07113 fxsA; UPF0716 protein FxsA
D      LC1Nh_0548 lemA; LemA protein	K03744 lemA; LemA protein
D      LC1Nh_1172 putative membrane protein, tripartite tricarboxylate transporter TctA family	K08971 K08971; putative membrane protein
D      LC1Nh_0378 putative transmembrane protein	K08974 K08974; putative membrane protein
D      LC1Nh_0769 ydbT; putative membrane protein YdbT, contains bPH2	K08981 K08981; putative membrane protein
C    99997 Function unknown
D      LC1Nh_0250 ydhJ; metal-dependent phosphohydrolase	K06885 K06885; uncharacterized protein
D      LC1Nh_0130 alpha/beta hydrolase fold protein	K06889 K06889; uncharacterized protein
D      LC1Nh_0452 AAA+ superfamily ATPase	K06921 K06921; uncharacterized protein
D      LC1Nh_0641 metal-dependent phosphohydrolase, HD superfamily	K06950 K06950; uncharacterized protein
D      LC1Nh_0803 metallophosphoesterase	K06953 K06953; uncharacterized protein
D      LC1Nh_0825 putative exporter of the RND superfamily	K07003 K07003; uncharacterized protein
D      LC1Nh_0826 putative exporter of the RND superfamily	K07003 K07003; uncharacterized protein
D      LC1Nh_1083 putative exporters of the RND superfamily	K07003 K07003; uncharacterized protein
D      LC1Nh_1084 putative exporter of the RND superfamily	K07003 K07003; uncharacterized protein
D      LC1Nh_0476 putative metal-dependent RNase	K07041 K07041; uncharacterized protein
D      LC1Nh_1196 putative toxin-antitoxin system toxin component,PIN family	K07063 K07063; uncharacterized protein
D      LC1Nh_0305 PilT protein domain protein	K07065 K07065; uncharacterized protein
D      LC1Nh_0408 PIN domain-containing protein	K07065 K07065; uncharacterized protein
D      LC1Nh_0929 PilT protein domain protein	K07065 K07065; uncharacterized protein
D      LC1Nh_0398 yfcE; phosphodiesterase	K07095 K07095; uncharacterized protein
D      LC1Nh_0382 metallophosphoesterase	K07096 K07096; uncharacterized protein
D      LC1Nh_0542 putative phosphoesterase, Icc family	K07096 K07096; uncharacterized protein
D      LC1Nh_0798 thiR; XRE family transcriptional regulator, thiamine biosynthesis regulator	K07108 K07108; uncharacterized protein
D      LC1Nh_0977 putative ATPase, AAA+ superfamily	K07133 K07133; uncharacterized protein
D      LC1Nh_0782 putative RNA-binding protein containing PIN domain	K07158 K07158; uncharacterized protein
D      LC1Nh_0284 proteasome assembly chaperone (PAC2) family protein	K07159 K07159; uncharacterized protein
D      LC1Nh_0744 Zn-ribbon containing protein	K07163 K07163; uncharacterized protein
D      LC1Nh_0328 hypothetical protein	K09005 K09005; uncharacterized protein
D      LC1Nh_0963 hypothetical protein	K09005 K09005; uncharacterized protein
D      LC1Nh_0010 hypothetical protein	K09131 K09131; uncharacterized protein
D      LC1Nh_0464 HEPN domain-containing protein	K09132 K09132; uncharacterized protein
D      LC1Nh_0664 putative nuclease of RNase H fold, RuvC/YqgF family	K09150 K09150; uncharacterized protein
D      LC1Nh_0566 hypothetical protein	K09152 K09152; uncharacterized protein
D      LC1Nh_0768 ydbS; putative membrane protein YdbS, contains bPH2	K09167 K09167; uncharacterized protein
D      LC1Nh_0565 hypothetical protein	K09721 K09721; uncharacterized protein
D      LC1Nh_0932 hypothetical protein	K09728 K09728; uncharacterized protein
D      LC1Nh_0745 hypothetical protein	K09743 K09743; uncharacterized protein
D      LC1Nh_0864 replication protein A (RPA) family protein	K09746 K09746; uncharacterized protein
D      LC1Nh_0532 hypothetical protein	K09779 K09779; uncharacterized protein
D      LC1Nh_0880 hypothetical protein	K09793 K09793; uncharacterized protein
D      LC1Nh_0940 hypothetical protein	K09802 K09802; uncharacterized protein
D      LC1Nh_0048 exonuclease	K07502 yprB; uncharacterized protein
!
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#Last updated: September 19, 2024