+D GENES KO
#
KEGG Orthology (KO) - Neisseria dentiae
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ndn00010]
D H3L92_03685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D H3L92_08520 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_03675 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_03245 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D H3L92_08900 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D H3L92_12845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D H3L92_11350 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D H3L92_04045 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D H3L92_11455 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D H3L92_10570 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D H3L92_02460 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D H3L92_10385 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D H3L92_03395 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D H3L92_07515 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D H3L92_07510 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_10690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D H3L92_05385 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D H3L92_02150 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D H3L92_02740 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D H3L92_06815 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D H3L92_03725 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D H3L92_05210 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:ndn00020]
D H3L92_05820 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D H3L92_10320 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D H3L92_04210 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D H3L92_05815 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D H3L92_05810 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_06810 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D H3L92_05835 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D H3L92_05830 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D H3L92_05845 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D H3L92_05840 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D H3L92_04450 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D H3L92_04455 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D H3L92_04460 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D H3L92_04465 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D H3L92_09240 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D H3L92_09245 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D H3L92_05850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D H3L92_07515 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D H3L92_07510 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ndn00030]
D H3L92_08520 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_03675 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_03695 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D H3L92_03690 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D H3L92_11405 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D H3L92_05060 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D H3L92_02790 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D H3L92_08730 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D H3L92_07185 rpiA; ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D H3L92_09695 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D H3L92_05210 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D H3L92_01990 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D H3L92_03700 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D H3L92_03705 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D H3L92_08285 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D H3L92_08900 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D H3L92_03245 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:ndn00040]
D H3L92_02050 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D H3L92_05060 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D H3L92_04545 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D H3L92_04540 mannitol dehydrogenase family protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
C 00051 Fructose and mannose metabolism [PATH:ndn00051]
D H3L92_07205 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D H3L92_05210 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D H3L92_03245 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D H3L92_03570 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D H3L92_04540 mannitol dehydrogenase family protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D H3L92_08900 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D H3L92_12845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D H3L92_03575 PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D H3L92_10205 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:ndn00052]
D H3L92_02050 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D H3L92_05210 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D H3L92_03685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00053 Ascorbate and aldarate metabolism
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:ndn00500]
D H3L92_05270 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D H3L92_02050 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D H3L92_02325 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D H3L92_02320 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D H3L92_02335 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D H3L92_02315 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D H3L92_02330 glgX; glycogen debranching protein GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D H3L92_12040 trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D H3L92_05210 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D H3L92_03685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D H3L92_08520 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_03675 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_07205 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ndn00520]
D H3L92_05905 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D H3L92_09810 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D H3L92_07205 carbohydrate kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D H3L92_12100 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D H3L92_02220 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D H3L92_12105 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D H3L92_09060 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D H3L92_02615 HAD family hydrolase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D H3L92_06150 phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D H3L92_10450 nucleotidyltransferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D H3L92_11295 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D H3L92_05290 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D H3L92_01105 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D H3L92_01100 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D H3L92_00310 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D H3L92_00305 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D H3L92_00290 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D H3L92_00295 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D H3L92_03685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D H3L92_05210 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D H3L92_02050 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D H3L92_10205 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D H3L92_08520 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_03675 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_05185 2Fe-2S iron-sulfur cluster binding domain-containing protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D H3L92_02325 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ndn00620]
D H3L92_07515 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D H3L92_07510 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_01810 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D H3L92_05385 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D H3L92_02150 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D H3L92_02740 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D H3L92_06815 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D H3L92_02645 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D H3L92_05180 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D H3L92_09975 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D H3L92_10385 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D H3L92_05130 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D H3L92_00440 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D H3L92_00435 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D H3L92_02530 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D H3L92_03725 aldehyde dehydrogenase family protein K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D H3L92_06810 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D H3L92_06515 alpha-hydroxy-acid oxidizing protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D H3L92_10690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D H3L92_06835 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D H3L92_03130 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D H3L92_12865 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D H3L92_02885 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D H3L92_07325 hchA; protein deglycase HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D H3L92_04720 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D H3L92_05850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D H3L92_09240 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D H3L92_09245 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D H3L92_04450 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D H3L92_04455 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D H3L92_04460 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D H3L92_04465 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D H3L92_02380 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D H3L92_03395 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D H3L92_07535 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_01045 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ndn00630]
D H3L92_10525 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D H3L92_07535 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D H3L92_05850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D H3L92_05820 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D H3L92_10320 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_10230 catalase K03781 katE; catalase [EC:1.11.1.6]
D H3L92_11530 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D H3L92_08805 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D H3L92_06365 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D H3L92_10305 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D H3L92_03100 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D H3L92_08220 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D H3L92_09425 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_09415 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D H3L92_01705 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D H3L92_03705 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D H3L92_05960 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D H3L92_05955 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D H3L92_05950 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
C 00640 Propanoate metabolism [PATH:ndn00640]
D H3L92_02645 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D H3L92_05180 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D H3L92_09975 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_01810 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D H3L92_09645 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D H3L92_05130 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D H3L92_00440 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D H3L92_00435 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D H3L92_02530 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D H3L92_05915 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D H3L92_02350 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D H3L92_08135 acnD; Fe/S-dependent 2-methylisocitrate dehydratase AcnD K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D H3L92_00775 prpF; 2-methylaconitate cis-trans isomerase PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D H3L92_10320 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D H3L92_02355 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D H3L92_10690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:ndn00650]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_05385 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D H3L92_05835 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D H3L92_05830 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D H3L92_05845 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D H3L92_05840 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D H3L92_04450 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D H3L92_04455 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D H3L92_04460 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D H3L92_04465 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D H3L92_01900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D H3L92_04170 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D H3L92_06810 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D H3L92_01810 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D H3L92_00030 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D H3L92_00025 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D H3L92_05945 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D H3L92_05000 zinc-dependent alcohol dehydrogenase family protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D H3L92_01915 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D H3L92_01920 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D H3L92_05150 2,3-butanediol dehydrogenase K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D H3L92_04280 acetoin reductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:ndn00660]
D H3L92_01915 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D H3L92_01920 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D H3L92_05010 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D H3L92_05020 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D H3L92_04145 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ndn00562]
D H3L92_08195 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D H3L92_02155 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D H3L92_05915 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D H3L92_12845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ndn00190]
D H3L92_12175 ndhC; NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D H3L92_12180 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D H3L92_12185 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D H3L92_12190 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D H3L92_12195 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D H3L92_09225 SLBB domain-containing protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D H3L92_12220 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D H3L92_12225 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D H3L92_12230 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D H3L92_12235 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D H3L92_12245 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D H3L92_12250 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D H3L92_12260 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D H3L92_12275 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D H3L92_12280 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D H3L92_05835 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D H3L92_05830 succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D H3L92_05845 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D H3L92_05840 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D H3L92_04450 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D H3L92_04455 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D H3L92_04460 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D H3L92_04465 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D H3L92_09485 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D H3L92_09480 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D H3L92_09475 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D H3L92_09080 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D H3L92_09085 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D H3L92_09090 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D H3L92_09095 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D H3L92_07170 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D H3L92_07175 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D H3L92_12345 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D H3L92_12355 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D H3L92_12350 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D H3L92_12340 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D H3L92_12360 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D H3L92_12325 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D H3L92_12335 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D H3L92_12330 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D H3L92_05055 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D H3L92_02195 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D H3L92_09635 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ndn00680]
D H3L92_08430 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D H3L92_05960 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D H3L92_05955 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D H3L92_05950 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D H3L92_03100 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D H3L92_11530 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D H3L92_02460 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D H3L92_02380 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D H3L92_05850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D H3L92_08900 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D H3L92_03245 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D H3L92_02645 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D H3L92_05180 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D H3L92_09975 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D H3L92_03395 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D H3L92_10570 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D H3L92_06215 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D H3L92_05750 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ndn00910]
D H3L92_11650 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D H3L92_11655 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D H3L92_11660 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_11620 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_11630 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_06185 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D H3L92_06190 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D H3L92_08110 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D H3L92_01895 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D H3L92_08445 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D H3L92_10305 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D H3L92_06710 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D H3L92_06690 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D H3L92_04740 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D H3L92_12825 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D H3L92_08255 carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ndn00920]
D H3L92_05265 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D H3L92_03805 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D H3L92_03885 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D H3L92_03880 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D H3L92_03875 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D H3L92_06715 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D H3L92_03800 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D H3L92_02915 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D H3L92_03810 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D H3L92_03345 cysI; assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D H3L92_12550 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D H3L92_05865 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D H3L92_06580 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D H3L92_02920 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D H3L92_02710 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ndn00061]
D H3L92_05130 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D H3L92_00440 acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D H3L92_00435 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D H3L92_02530 acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D H3L92_10190 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D H3L92_05560 acyl carrier protein K02078 acpP; acyl carrier protein
D H3L92_05625 acyl carrier protein K02078 acpP; acyl carrier protein
D H3L92_05630 acyl carrier protein K02078 acpP; acyl carrier protein
D H3L92_01535 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D H3L92_01545 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D H3L92_05585 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D H3L92_05530 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D H3L92_05555 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D H3L92_10185 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D H3L92_05655 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D H3L92_04565 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D H3L92_05650 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D H3L92_11925 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D H3L92_02630 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D H3L92_06930 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ndn00071]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_06930 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D H3L92_05385 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D H3L92_02150 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D H3L92_02740 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ndn00561]
D H3L92_01705 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D H3L92_06815 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D H3L92_01580 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D H3L92_04420 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D H3L92_09020 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D H3L92_00100 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D H3L92_01470 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D H3L92_07480 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:ndn00564]
D H3L92_00625 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D H3L92_00300 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D H3L92_04420 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D H3L92_09020 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D H3L92_00100 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D H3L92_01470 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D H3L92_07480 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D H3L92_09330 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D H3L92_11895 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D H3L92_05230 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D H3L92_02830 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D H3L92_06460 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D H3L92_10110 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D H3L92_05490 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D H3L92_01950 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D H3L92_00805 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism [PATH:ndn00565]
D H3L92_09330 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:ndn00600]
D H3L92_09810 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D H3L92_09330 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D H3L92_09330 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:ndn00592]
D H3L92_09330 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ndn00230]
D H3L92_03355 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D H3L92_05210 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D H3L92_01990 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D H3L92_04870 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D H3L92_11595 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D H3L92_06915 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D H3L92_07420 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D H3L92_01850 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D H3L92_02280 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D H3L92_06850 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D H3L92_06255 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D H3L92_12095 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D H3L92_08570 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D H3L92_04675 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D H3L92_02345 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D H3L92_02670 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D H3L92_04160 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D H3L92_10200 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D H3L92_02455 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D H3L92_08015 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D H3L92_08415 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D H3L92_08650 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D H3L92_03300 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D H3L92_04680 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D H3L92_05485 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D H3L92_05475 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D H3L92_12505 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D H3L92_07565 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D H3L92_04690 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D H3L92_02875 ppx; exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D H3L92_02485 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D H3L92_11505 CYTH domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D H3L92_07775 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D H3L92_02295 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D H3L92_03250 symmetrical bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D H3L92_06715 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D H3L92_03800 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D H3L92_04745 allB; allantoinase AllB K01466 allB; allantoinase [EC:3.5.2.5]
D H3L92_04760 cupin domain-containing protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D H3L92_03305 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D H3L92_04740 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:ndn00240]
D H3L92_10435 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D H3L92_00250 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D H3L92_10400 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D H3L92_12540 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D H3L92_04755 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D H3L92_12545 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D H3L92_05695 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D H3L92_10620 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D H3L92_09165 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D H3L92_01750 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D H3L92_11855 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D H3L92_08015 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D H3L92_01600 maf; septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D H3L92_01880 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D H3L92_07795 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D H3L92_12310 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D H3L92_02345 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D H3L92_02670 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D H3L92_07905 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D H3L92_12505 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D H3L92_06425 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D H3L92_05485 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D H3L92_05475 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D H3L92_08060 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D H3L92_07770 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D H3L92_08435 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D H3L92_10445 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ndn00250]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D H3L92_04765 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D H3L92_08425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D H3L92_02840 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D H3L92_02025 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D H3L92_02270 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D H3L92_07775 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D H3L92_12095 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D H3L92_12540 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D H3L92_04755 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D H3L92_12545 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D H3L92_01900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D H3L92_04170 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
D H3L92_06710 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D H3L92_06690 FAD-dependent oxidoreductase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D H3L92_08445 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D H3L92_00470 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D H3L92_10305 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D H3L92_10435 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D H3L92_00250 ATP-grasp domain-containing protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D H3L92_10400 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D H3L92_12100 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D H3L92_04870 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ndn00260]
D H3L92_05980 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D H3L92_11180 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D H3L92_04255 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D H3L92_10075 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D H3L92_04130 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D H3L92_11585 low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D H3L92_03100 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D H3L92_11530 D-2-hydroxyacid dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D H3L92_01705 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D H3L92_10570 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D H3L92_06215 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D H3L92_05750 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D H3L92_10445 SDR family oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D H3L92_08220 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D H3L92_09425 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_09415 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D H3L92_02830 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D H3L92_10580 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D H3L92_10575 betB; betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D H3L92_05250 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D H3L92_07405 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D H3L92_09410 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D H3L92_02535 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D H3L92_08265 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D H3L92_07410 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ndn00270]
D H3L92_12550 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D H3L92_05865 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D H3L92_09560 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D H3L92_10155 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D H3L92_05900 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D H3L92_08365 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D H3L92_04160 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D H3L92_02145 S-methyl-5'-thioinosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D H3L92_03945 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D H3L92_00685 GAF domain-containing protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D H3L92_09610 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D H3L92_05980 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D H3L92_11180 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D H3L92_04255 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D H3L92_06580 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D H3L92_02920 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D H3L92_02710 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D H3L92_05495 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D H3L92_05005 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D H3L92_07485 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D H3L92_10690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D H3L92_09410 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D H3L92_05850 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D H3L92_05250 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D H3L92_06215 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ndn00280]
D H3L92_05495 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05940 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D H3L92_05915 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D H3L92_00030 CoA transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D H3L92_00025 CoA transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ndn00290]
D H3L92_07405 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D H3L92_05010 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D H3L92_05020 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D H3L92_04145 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D H3L92_01915 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D H3L92_01920 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D H3L92_01930 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D H3L92_06660 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D H3L92_05495 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D H3L92_08425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D H3L92_01045 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ndn00300]
D H3L92_04255 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D H3L92_05980 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D H3L92_11180 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D H3L92_09190 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D H3L92_07880 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D H3L92_07900 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D H3L92_04790 acetylornithine/succinyldiaminopimelate transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D H3L92_01940 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D H3L92_08230 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D H3L92_05880 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D H3L92_10655 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D H3L92_11135 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D H3L92_11115 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ndn00310]
D H3L92_05810 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_09410 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D H3L92_01900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ndn00220]
D H3L92_02640 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D H3L92_02025 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D H3L92_02270 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D H3L92_03305 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D H3L92_10305 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D H3L92_08445 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D H3L92_04740 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D H3L92_08425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D H3L92_09915 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D H3L92_09035 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D H3L92_05070 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D H3L92_01685 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D H3L92_04790 acetylornithine/succinyldiaminopimelate transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ndn00330]
D H3L92_08205 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D H3L92_02230 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D H3L92_05900 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
D H3L92_04715 NAD(P)-binding protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D H3L92_11240 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D H3L92_00470 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D H3L92_12300 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D H3L92_05675 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ndn00340]
D H3L92_01230 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D H3L92_07780 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D H3L92_06125 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D H3L92_06130 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D H3L92_06680 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D H3L92_06685 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D H3L92_06665 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D H3L92_06480 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D H3L92_06485 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D H3L92_01245 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:ndn00350]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D H3L92_06485 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D H3L92_03945 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D H3L92_00055 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D H3L92_00035 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D H3L92_00045 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D H3L92_08780 FAD-binding oxidoreductase K25271 tynA; tyramine oxidase subunit A [EC:1.4.3.-]
D H3L92_08765 ornithine cyclodeaminase K25272 tynB; tyramine oxidase subunit B [EC:1.4.3.-]
D H3L92_05385 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D H3L92_02150 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D H3L92_02740 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D H3L92_00405 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D H3L92_07555 5-carboxymethyl-2-hydroxymuconate Delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D H3L92_01900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ndn00360]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D H3L92_06485 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D H3L92_03945 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D H3L92_00055 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D H3L92_08180 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00380 Tryptophan metabolism [PATH:ndn00380]
D H3L92_05810 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D H3L92_10230 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ndn00400]
D H3L92_00545 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D H3L92_09970 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D H3L92_05300 type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D H3L92_10310 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D H3L92_09965 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D H3L92_04535 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D H3L92_07430 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D H3L92_02285 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D H3L92_02545 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D H3L92_02540 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D H3L92_08270 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D H3L92_10470 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D H3L92_02535 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D H3L92_08265 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D H3L92_07410 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D H3L92_00165 pheA; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D H3L92_07865 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D H3L92_06485 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D H3L92_03945 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ndn00410]
D H3L92_08635 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D H3L92_04715 NAD(P)-binding protein K00316 spdH; spermidine dehydrogenase [EC:1.5.99.6]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D H3L92_06390 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D H3L92_05915 CoA-acylating methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ndn00430]
D H3L92_11400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D H3L92_09975 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D H3L92_02645 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D H3L92_05180 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:ndn00450]
D H3L92_02920 PLP-dependent transferase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D H3L92_09560 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D H3L92_04590 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D H3L92_06715 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D H3L92_03800 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D H3L92_12050 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ndn00460]
D H3L92_11400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D H3L92_04765 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D H3L92_03100 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ndn00470]
D H3L92_01250 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D H3L92_11075 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D H3L92_09410 aspartate/glutamate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D H3L92_02480 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D H3L92_11095 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D H3L92_05880 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D H3L92_10655 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D H3L92_08180 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ndn00480]
D H3L92_11400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D H3L92_09270 pxpA; 5-oxoprolinase subunit PxpA K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D H3L92_09280 pxpB; 5-oxoprolinase subunit PxpB K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D H3L92_09275 biotin-dependent carboxyltransferase family protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D H3L92_05005 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D H3L92_07485 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D H3L92_04375 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D H3L92_09815 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D H3L92_05455 pepD; beta-Ala-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D H3L92_03455 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D H3L92_04210 icd; NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D H3L92_11405 gnd; decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D H3L92_03695 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D H3L92_06230 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D H3L92_02100 glutathione peroxidase K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D H3L92_05900 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ndn00511]
D H3L92_09810 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:ndn00540]
D H3L92_11930 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D H3L92_11355 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D H3L92_11920 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D H3L92_08225 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D H3L92_12070 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D H3L92_06065 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D H3L92_08725 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D H3L92_08640 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D H3L92_08710 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D H3L92_06050 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D H3L92_11970 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D H3L92_10145 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D H3L92_10520 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D H3L92_09370 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D H3L92_12900 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D H3L92_01755 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D H3L92_01465 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D H3L92_12795 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D H3L92_01770 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D H3L92_11555 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D H3L92_03845 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D H3L92_12960 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ndn00541]
D H3L92_02050 galU; UTP--glucose-1-phosphate uridylyltransferase GalU K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D H3L92_01195 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D H3L92_01200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D H3L92_01190 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D H3L92_01185 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D H3L92_05185 2Fe-2S iron-sulfur cluster binding domain-containing protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D H3L92_12105 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D H3L92_01105 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D H3L92_01100 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D H3L92_00235 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D H3L92_00310 nucleotide sugar dehydrogenase K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D H3L92_00305 Gfo/Idh/MocA family oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D H3L92_00290 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D H3L92_00295 N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:ndn00550]
D H3L92_11295 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D H3L92_05290 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D H3L92_11080 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D H3L92_11095 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D H3L92_11135 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D H3L92_11075 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D H3L92_11115 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D H3L92_11890 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D H3L92_01480 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D H3L92_11110 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D H3L92_11085 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D H3L92_10315 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D H3L92_09935 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D H3L92_05420 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D H3L92_11140 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D H3L92_07400 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:ndn00552]
D H3L92_01480 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D H3L92_00235 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ndn00543]
D H3L92_10330 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D H3L92_12550 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ndn00730]
D H3L92_06720 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D H3L92_12765 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D H3L92_06525 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D H3L92_12480 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D H3L92_12760 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D H3L92_09795 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D H3L92_10115 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D H3L92_11310 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D H3L92_02295 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ndn00740]
D H3L92_06805 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D H3L92_05140 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D H3L92_00315 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D H3L92_02800 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D H3L92_02105 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D H3L92_08735 ribF; bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D H3L92_00405 hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D H3L92_12455 nfsA; oxygen-insensitive NADPH nitroreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D H3L92_12760 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D H3L92_03355 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D H3L92_09540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D H3L92_04430 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ndn00750]
D H3L92_02870 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D H3L92_06215 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D H3L92_12815 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D H3L92_02070 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D H3L92_04130 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ndn00760]
D H3L92_04570 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D H3L92_02345 bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D H3L92_02670 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D H3L92_12830 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D H3L92_03075 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D H3L92_12085 pncC; nicotinamide-nucleotide amidase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D H3L92_11550 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D H3L92_01140 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D H3L92_02360 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D H3L92_02820 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D H3L92_04470 NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D H3L92_03135 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D H3L92_03185 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D H3L92_01900 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D H3L92_04170 aldehyde dehydrogenase family protein K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24]
C 00770 Pantothenate and CoA biosynthesis [PATH:ndn00770]
D H3L92_01915 ilvB; biosynthetic-type acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D H3L92_01920 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D H3L92_01930 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D H3L92_06660 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D H3L92_06395 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D H3L92_06390 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D H3L92_12800 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase K01947 birA-coaX; biotin---[acetyl-CoA-carboxylase] ligase / type III pantothenate kinase [EC:6.3.4.15 2.7.1.33]
D H3L92_06350 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D H3L92_09510 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D H3L92_01165 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D H3L92_02060 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D H3L92_06840 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D H3L92_05495 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D H3L92_08635 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ndn00780]
D H3L92_12075 methyltransferase domain-containing protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D H3L92_05275 bioC; malonyl-ACP O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D H3L92_05530 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D H3L92_05555 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D H3L92_10185 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D H3L92_05655 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D H3L92_04565 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D H3L92_05650 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D H3L92_11925 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D H3L92_02630 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D H3L92_12140 bioH; pimeloyl-ACP methyl ester esterase BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D H3L92_05280 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D H3L92_03360 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D H3L92_10095 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D H3L92_12435 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D H3L92_12800 bifunctional biotin--[acetyl-CoA-carboxylase] ligase/type III pantothenate kinase K01947 birA-coaX; biotin---[acetyl-CoA-carboxylase] ligase / type III pantothenate kinase [EC:6.3.4.15 2.7.1.33]
C 00785 Lipoic acid metabolism [PATH:ndn00785]
D H3L92_04500 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D H3L92_04490 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_07515 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D H3L92_07510 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D H3L92_05815 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D H3L92_05810 odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D H3L92_08220 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D H3L92_09425 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D H3L92_09415 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ndn00790]
D H3L92_02925 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D H3L92_04620 nudB; dihydroneopterin triphosphate diphosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D H3L92_04425 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D H3L92_07965 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D H3L92_02720 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D H3L92_12370 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D H3L92_04855 folC; bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D H3L92_06805 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D H3L92_05140 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D H3L92_09640 chorismate-binding protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D H3L92_01670 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D H3L92_01660 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D H3L92_01675 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D H3L92_12925 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D H3L92_09125 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D H3L92_02370 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D H3L92_03625 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D H3L92_02140 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D H3L92_03635 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D H3L92_03630 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ndn00670]
D H3L92_12370 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D H3L92_00820 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D H3L92_12775 folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D H3L92_03100 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D H3L92_06915 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D H3L92_08570 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D H3L92_10815 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D H3L92_00245 formyl transferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D H3L92_09425 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D H3L92_08435 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D H3L92_01440 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D H3L92_11700 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ndn00860]
D H3L92_11725 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D H3L92_06630 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D H3L92_00665 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D H3L92_08175 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D H3L92_02610 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D H3L92_02775 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D H3L92_02760 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D H3L92_05710 hemF; oxygen-dependent coproporphyrinogen oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D H3L92_10135 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D H3L92_11500 CopD family protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D H3L92_01630 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D H3L92_02770 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D H3L92_02780 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D H3L92_06890 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D H3L92_06895 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ndn00130]
D H3L92_06200 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D H3L92_06210 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D H3L92_08605 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D H3L92_09540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D H3L92_04430 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D H3L92_02665 FAD-dependent monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D H3L92_00150 ubiG; bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D H3L92_04575 ubiE; bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D H3L92_09500 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D H3L92_12290 NAD(P)H-dependent oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D H3L92_12450 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D H3L92_00055 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ndn00900]
D H3L92_12480 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D H3L92_11900 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D H3L92_08335 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D H3L92_01975 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D H3L92_07190 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D H3L92_07995 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D H3L92_01430 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_09540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D H3L92_04430 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D H3L92_11415 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D H3L92_12940 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D H3L92_11890 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D H3L92_11285 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:ndn00906]
D H3L92_05735 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D H3L92_02790 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ndn00523]
D H3L92_01195 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D H3L92_01200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D H3L92_01190 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D H3L92_01185 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D H3L92_07545 chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D H3L92_01200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ndn00332]
D H3L92_12300 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D H3L92_05675 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ndn00261]
D H3L92_06715 50S ribosome-binding GTPase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D H3L92_03800 cysD; sulfate adenylyltransferase subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D H3L92_05980 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D H3L92_11180 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D H3L92_09190 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D H3L92_07880 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ndn00521]
D H3L92_03685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D H3L92_05210 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D H3L92_08195 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D H3L92_02155 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D H3L92_01195 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D H3L92_01200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D H3L92_01190 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D H3L92_01185 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D H3L92_03685 glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ndn00525]
D H3L92_01195 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D H3L92_01200 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ndn00401]
D H3L92_07865 prephenate dehydrogenase/arogenate dehydrogenase family protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D H3L92_06485 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D H3L92_03945 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D H3L92_02285 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D H3L92_02545 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D H3L92_01535 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D H3L92_04565 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D H3L92_05650 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D H3L92_02630 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D H3L92_10190 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D H3L92_05560 acyl carrier protein K02078 acpP; acyl carrier protein
D H3L92_05625 acyl carrier protein K02078 acpP; acyl carrier protein
D H3L92_05630 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ndn00999]
D H3L92_10155 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D H3L92_10310 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ndn00362]
D H3L92_07355 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D H3L92_03190 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D H3L92_09540 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D H3L92_04430 UbiX family flavin prenyltransferase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ndn00625]
D H3L92_02150 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D H3L92_02740 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D H3L92_05385 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D H3L92_11990 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:ndn00643]
D H3L92_00035 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D H3L92_00045 fumarylacetoacetate hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
D H3L92_03305 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:ndn00626]
D H3L92_02150 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D H3L92_02740 iron-containing alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D H3L92_05385 adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ndn03020]
D H3L92_10725 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D H3L92_10720 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D H3L92_12750 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D H3L92_04685 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ndn03010]
D H3L92_07790 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D H3L92_11845 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D H3L92_12650 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D H3L92_12745 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D H3L92_12705 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D H3L92_05120 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D H3L92_12515 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D H3L92_12690 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D H3L92_00650 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D H3L92_12530 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D H3L92_12740 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D H3L92_12510 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D H3L92_12735 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D H3L92_12685 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D H3L92_02175 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D H3L92_09760 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D H3L92_12665 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D H3L92_05110 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D H3L92_12640 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D H3L92_09335 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D H3L92_01820 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D H3L92_10740 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D H3L92_12635 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D H3L92_12620 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D H3L92_12625 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D H3L92_12680 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D H3L92_12695 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D H3L92_10730 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D H3L92_05105 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D H3L92_10735 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D H3L92_10745 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D H3L92_00645 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D H3L92_12670 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D H3L92_12715 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D H3L92_12655 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D H3L92_12755 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D H3L92_12700 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D H3L92_09775 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D H3L92_08845 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D H3L92_12945 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D H3L92_12645 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D H3L92_12630 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D H3L92_12675 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D H3L92_01995 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D H3L92_12950 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D H3L92_08565 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D H3L92_12660 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D H3L92_12710 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D H3L92_10295 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D H3L92_12470 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D H3L92_01570 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D H3L92_08560 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D H3L92_13000 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D H3L92_08840 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D H3L92_10290 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D H3L92_12730 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D H3L92_00960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ndn00970]
D H3L92_11170 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_00950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_08160 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_10060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_11215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_05690 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D H3L92_08885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D H3L92_01910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D H3L92_12785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D H3L92_00540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D H3L92_05500 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D H3L92_04395 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D H3L92_04555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D H3L92_00785 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D H3L92_01980 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D H3L92_01985 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D H3L92_06415 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D H3L92_05685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D H3L92_08890 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D H3L92_10775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D H3L92_00790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D H3L92_00795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D H3L92_00800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D H3L92_12790 tRNA-His K14226 tRNA-His; tRNA His
D H3L92_00945 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D H3L92_08165 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D H3L92_10065 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D H3L92_11220 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D H3L92_06795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_04955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_01220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_04960 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_12855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_00780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_10390 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D H3L92_11790 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D H3L92_00975 tRNA-Met K14230 tRNA-Met; tRNA Met
D H3L92_08610 tRNA-Ile K14230 tRNA-Met; tRNA Met
D H3L92_11165 tRNA-Met K14230 tRNA-Met; tRNA Met
D H3L92_01145 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D H3L92_01550 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D H3L92_08935 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D H3L92_12780 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D H3L92_04195 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D H3L92_03735 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D H3L92_03060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D H3L92_03065 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D H3L92_10770 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D H3L92_06400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D H3L92_10760 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D H3L92_10780 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D H3L92_08825 tRNA-Val K14237 tRNA-Val; tRNA Val
D H3L92_04390 tRNA-Val K14237 tRNA-Val; tRNA Val
D H3L92_04560 tRNA-Val K14237 tRNA-Val; tRNA Val
D H3L92_11725 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D H3L92_05395 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D H3L92_04600 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D H3L92_05400 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D H3L92_07700 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D H3L92_05200 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D H3L92_09320 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D H3L92_02565 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D H3L92_02585 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D H3L92_08830 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D H3L92_02865 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D H3L92_08980 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D H3L92_12050 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D H3L92_10815 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D H3L92_00245 formyl transferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D H3L92_12875 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D H3L92_12375 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D H3L92_09700 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D H3L92_11705 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D H3L92_09290 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D H3L92_04165 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D H3L92_07985 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D H3L92_08970 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D H3L92_08950 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D H3L92_00115 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D H3L92_07950 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ndn03060]
D H3L92_12720 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D H3L92_10755 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D H3L92_12850 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D H3L92_04065 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D H3L92_04060 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D H3L92_04070 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D H3L92_12985 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D H3L92_08615 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D H3L92_12560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D H3L92_00475 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D H3L92_11015 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D H3L92_06115 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D H3L92_06110 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D H3L92_06105 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D H3L92_04405 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D H3L92_01425 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ndn04122]
D H3L92_06525 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D H3L92_05705 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D H3L92_06925 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D H3L92_03625 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D H3L92_09125 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D H3L92_03620 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D H3L92_02365 HesA/MoeB/ThiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D H3L92_02370 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D H3L92_02140 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ndn03018]
D H3L92_01450 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D H3L92_08210 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D H3L92_02460 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D H3L92_06410 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D H3L92_00560 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D H3L92_04950 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D H3L92_10960 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D H3L92_07570 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D H3L92_09465 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D H3L92_01130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D H3L92_04990 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D H3L92_02195 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D H3L92_09635 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D H3L92_06870 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ndn03030]
D H3L92_08340 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_08880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_12490 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_09395 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D H3L92_04225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D H3L92_08240 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D H3L92_03425 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D H3L92_02860 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D H3L92_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D H3L92_05050 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D H3L92_01830 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D H3L92_02905 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D H3L92_08405 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D H3L92_12065 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D H3L92_12580 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D H3L92_02055 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ndn03410]
D H3L92_05245 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D H3L92_07490 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D H3L92_07810 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D H3L92_00110 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D H3L92_09405 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D H3L92_09750 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D H3L92_08300 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D H3L92_09170 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D H3L92_12580 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D H3L92_08740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D H3L92_02055 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ndn03420]
D H3L92_05370 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D H3L92_03795 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D H3L92_03020 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D H3L92_00810 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D H3L92_11665 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D H3L92_12580 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D H3L92_02055 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ndn03430]
D H3L92_11280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D H3L92_05225 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D H3L92_11665 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D H3L92_05680 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D H3L92_11410 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D H3L92_08740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D H3L92_02905 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D H3L92_09395 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D H3L92_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D H3L92_04225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D H3L92_03425 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D H3L92_08240 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D H3L92_08340 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_08880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_12490 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_02860 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D H3L92_02055 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ndn03440]
D H3L92_08740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D H3L92_02905 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D H3L92_02075 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D H3L92_04640 recR; recombination protein RecR K06187 recR; recombination protein RecR
D H3L92_02290 recA; recombinase RecA K03553 recA; recombination protein RecA
D H3L92_12580 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D H3L92_12160 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D H3L92_03365 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D H3L92_10180 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D H3L92_08795 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D H3L92_06295 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D H3L92_06885 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D H3L92_00565 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D H3L92_04795 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D H3L92_09395 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D H3L92_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D H3L92_04225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D H3L92_03425 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D H3L92_08240 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D H3L92_08340 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_08880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_12490 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_02860 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D H3L92_00555 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D H3L92_05115 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ndn03250]
D H3L92_05075 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ndn02010]
D H3L92_05265 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D H3L92_03805 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D H3L92_03885 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D H3L92_03880 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D H3L92_03875 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D H3L92_03615 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D H3L92_03610 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D H3L92_03605 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D H3L92_11985 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D H3L92_11980 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D H3L92_11975 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D H3L92_12120 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D H3L92_10300 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D H3L92_09780 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D H3L92_09340 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D H3L92_01445 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D H3L92_08115 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D H3L92_08120 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D H3L92_08125 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D H3L92_02245 proW; glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D H3L92_02240 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D H3L92_11715 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D H3L92_11710 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D H3L92_06725 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D H3L92_10635 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D H3L92_10640 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D H3L92_10645 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D H3L92_10630 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D H3L92_10650 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D H3L92_05175 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D H3L92_04020 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D H3L92_04015 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D H3L92_04010 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D H3L92_05095 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D H3L92_05085 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D H3L92_05090 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D H3L92_05080 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D H3L92_04820 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D H3L92_04815 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D H3L92_04810 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D H3L92_00170 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D H3L92_00175 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D H3L92_00180 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D H3L92_03330 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D H3L92_03325 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D H3L92_03320 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D H3L92_03315 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D H3L92_09250 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D H3L92_10355 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D H3L92_10360 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D H3L92_10365 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D H3L92_10370 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D H3L92_03870 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D H3L92_03865 ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D H3L92_03860 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D H3L92_03855 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D H3L92_03850 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D H3L92_10515 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D H3L92_06140 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D H3L92_06135 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D H3L92_06040 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D H3L92_00615 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D H3L92_00610 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D H3L92_00620 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D H3L92_01115 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D H3L92_01120 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D H3L92_01125 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D H3L92_05665 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D H3L92_05660 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D H3L92_04380 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D H3L92_04385 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D H3L92_08695 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D H3L92_11025 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D H3L92_11020 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D H3L92_02570 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D H3L92_00395 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D H3L92_12165 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D H3L92_02005 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D H3L92_07930 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D H3L92_00600 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D H3L92_04025 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:ndn02060]
D H3L92_10215 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D H3L92_10210 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D H3L92_10205 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D H3L92_03565 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D H3L92_03575 PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D H3L92_03570 pfkB; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D H3L92_07845 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ndn03070]
D H3L92_00330 TolC family protein K12340 tolC; outer membrane protein
D H3L92_04065 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D H3L92_04060 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D H3L92_10755 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D H3L92_12850 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D H3L92_12720 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D H3L92_04070 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D H3L92_12985 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D H3L92_08615 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D H3L92_11015 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D H3L92_12560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D H3L92_00475 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D H3L92_06115 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D H3L92_06110 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D H3L92_06105 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D H3L92_07690 lytic transglycosylase domain-containing protein K03194 virB1; type IV secretion system protein VirB1
D H3L92_07685 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2
D H3L92_07680 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3
D H3L92_07605 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9
D H3L92_07625 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D H3L92_07635 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D H3L92_07655 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D H3L92_07665 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D H3L92_07610 type IV secretion system protein K03203 virB8; type IV secretion system protein VirB8
D H3L92_07600 TrbI/VirB10 family protein K03195 virB10; type IV secretion system protein VirB10
D H3L92_07675 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D H3L92_07595 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D H3L92_10950 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ndn02020]
D H3L92_04000 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D H3L92_04005 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D H3L92_05175 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D H3L92_05910 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D H3L92_09345 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D H3L92_06610 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D H3L92_06605 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D H3L92_06600 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D H3L92_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D H3L92_09605 FepA family TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D H3L92_02965 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D H3L92_02970 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D H3L92_02975 HpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D H3L92_02985 citX; citrate lyase holo-[acyl-carrier protein] synthase K13927 citXG; holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase [EC:2.7.7.61 2.4.2.52]
D H3L92_02265 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D H3L92_00980 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR
D H3L92_11635 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D H3L92_11640 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D H3L92_11660 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_11620 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_11630 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_11625 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D H3L92_04450 frdA; fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D H3L92_04455 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D H3L92_04460 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D H3L92_04465 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D H3L92_08645 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D H3L92_01020 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D H3L92_01035 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D H3L92_01025 molecular chaperone K07346 fimC; fimbrial chaperone protein
D H3L92_01030 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D H3L92_06590 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D H3L92_07415 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D H3L92_10305 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D H3L92_10800 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D H3L92_10795 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_00575 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D H3L92_00570 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D H3L92_08690 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D H3L92_09155 pilin K02650 pilA; type IV pilus assembly protein PilA
D H3L92_09160 pilin K02650 pilA; type IV pilus assembly protein PilA
D H3L92_08555 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D H3L92_08550 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D H3L92_05080 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D H3L92_05085 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D H3L92_05090 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D H3L92_05095 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D H3L92_01050 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase
D H3L92_09485 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D H3L92_09480 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D H3L92_09475 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D H3L92_09080 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D H3L92_09085 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D H3L92_09090 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D H3L92_09095 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D H3L92_07170 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D H3L92_07175 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D H3L92_00330 TolC family protein K12340 tolC; outer membrane protein
D H3L92_00230 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D H3L92_01110 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D H3L92_00225 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D H3L92_01505 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D H3L92_00220 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D H3L92_01105 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D H3L92_01100 wecC; UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D H3L92_09485 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ndn02024]
D H3L92_09610 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D H3L92_04990 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D H3L92_02285 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D H3L92_02545 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D H3L92_00545 aroG; 3-deoxy-7-phosphoheptulonate synthase AroG K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D H3L92_09345 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D H3L92_01050 crotonase/enoyl-CoA hydratase family protein K13816 rpfF; DSF synthase
D H3L92_06930 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D H3L92_05775 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D H3L92_06805 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D H3L92_00315 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D H3L92_04100 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D H3L92_01360 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D H3L92_09250 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D H3L92_10355 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D H3L92_10360 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D H3L92_10365 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D H3L92_10370 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D H3L92_12985 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D H3L92_10755 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D H3L92_12850 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D H3L92_12720 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D H3L92_04070 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D H3L92_08615 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D H3L92_11015 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D H3L92_12560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D H3L92_00475 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ndn02030]
D H3L92_03870 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D H3L92_08555 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D H3L92_08550 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D H3L92_08545 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
C 02040 Flagellar assembly [PATH:ndn02040]
D H3L92_04820 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D H3L92_01835 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D H3L92_08690 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D H3L92_02460 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ndn01501]
D H3L92_09390 porin K18133 K18133; major outer membrane protein P.IB
D H3L92_09905 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D H3L92_05905 nagZ; beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D H3L92_09250 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D H3L92_10355 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D H3L92_10360 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D H3L92_10365 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D H3L92_10370 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D H3L92_01350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D H3L92_01355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D H3L92_01360 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D H3L92_00330 TolC family protein K12340 tolC; outer membrane protein
D H3L92_09935 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D H3L92_05420 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D H3L92_11140 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ndn01502]
D H3L92_11075 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D H3L92_01250 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D H3L92_11115 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D H3L92_11110 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D H3L92_11085 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ndn01503]
D H3L92_09370 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D H3L92_02470 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D H3L92_05910 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D H3L92_01485 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D H3L92_05075 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D H3L92_01350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D H3L92_01355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D H3L92_00330 TolC family protein K12340 tolC; outer membrane protein
D H3L92_11930 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ndn01000]
C 01001 Protein kinases [BR:ndn01001]
D H3L92_00220 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D H3L92_04000 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D H3L92_09345 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D H3L92_06085 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D H3L92_10555 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D H3L92_11635 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D H3L92_02265 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D H3L92_10800 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D H3L92_00575 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D H3L92_08555 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ndn01009]
D H3L92_05750 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ndn01002]
D H3L92_01425 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D H3L92_01160 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D H3L92_08650 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D H3L92_03300 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D H3L92_00395 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D H3L92_04870 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D H3L92_06710 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D H3L92_12100 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D H3L92_07325 hchA; protein deglycase HchA K05523 hchA; D-lactate dehydratase / protein deglycase [EC:4.2.1.130 3.5.1.124]
D H3L92_00505 L,D-transpeptidase K19234 ynhG; L,D-transpeptidase YnhG
D H3L92_09815 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D H3L92_08310 M3 family metallopeptidase K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D H3L92_11010 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D H3L92_11035 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D H3L92_05435 insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D H3L92_04375 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D H3L92_08230 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D H3L92_05455 pepD; beta-Ala-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D H3L92_11125 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D H3L92_12885 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D H3L92_08860 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D H3L92_02735 aminopeptidase P N-terminal domain-containing protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D H3L92_02950 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D H3L92_11285 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D H3L92_03660 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D H3L92_11905 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D H3L92_05910 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D H3L92_10195 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D H3L92_07400 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D H3L92_08105 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D H3L92_08380 clpP; ATP-dependent Clp endopeptidase proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D H3L92_04510 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D H3L92_04405 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D H3L92_07460 S41 family peptidase K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D H3L92_02445 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-]
D H3L92_09890 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D H3L92_11400 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D H3L92_09625 tRNA 5-hydroxyuridine modification protein YegQ K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D H3L92_09305 pmbA; metalloprotease PmbA K03592 pmbA; PmbA protein
D H3L92_00590 tldD; metalloprotease TldD K03568 tldD; TldD protein
C 01003 Glycosyltransferases [BR:ndn01003]
D H3L92_02320 glgA; glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21]
D H3L92_10315 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D H3L92_09935 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D H3L92_10330 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ndn01005]
D H3L92_11930 lpxA; acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D H3L92_12070 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D H3L92_11355 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D H3L92_11920 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D H3L92_08225 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D H3L92_06065 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D H3L92_10145 lysophospholipid acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D H3L92_10520 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D H3L92_11970 waaA; lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D H3L92_09370 phosphoethanolamine--lipid A transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D H3L92_08640 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D H3L92_06050 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D H3L92_08710 HAD family hydrolase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D H3L92_08725 KpsF/GutQ family sugar-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D H3L92_01755 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D H3L92_12795 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D H3L92_11555 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D H3L92_03845 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D H3L92_12960 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D H3L92_12900 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D H3L92_01465 gmhB; D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D H3L92_01770 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ndn01011]
D H3L92_11295 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D H3L92_05290 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D H3L92_11080 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D H3L92_11095 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D H3L92_11135 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D H3L92_11075 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D H3L92_01250 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D H3L92_02480 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D H3L92_09890 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D H3L92_11110 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D H3L92_11085 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D H3L92_01480 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D H3L92_08385 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D H3L92_09935 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D H3L92_05420 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D H3L92_11140 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D H3L92_07400 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D H3L92_08105 serine hydrolase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D H3L92_10315 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D H3L92_00505 L,D-transpeptidase K19234 ynhG; L,D-transpeptidase YnhG
D H3L92_11125 M23 family metallopeptidase K21472 lytH; peptidoglycan LD-endopeptidase LytH [EC:3.4.-.-]
D H3L92_00720 lytic transglycosylase domain-containing protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D H3L92_11445 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D H3L92_04220 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D H3L92_04905 LysM peptidoglycan-binding domain-containing protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D H3L92_08055 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D H3L92_12155 septal ring lytic transglycosylase RlpA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D H3L92_02470 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D H3L92_08050 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ndn01004]
D H3L92_01535 fabD; ACP S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D H3L92_01545 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D H3L92_05585 beta-ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D H3L92_05530 beta-ketoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D H3L92_05555 beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D H3L92_10185 fabF; beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D H3L92_05655 beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D H3L92_04565 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D H3L92_05650 fabG; 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D H3L92_11925 fabZ; 3-hydroxyacyl-ACP dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D H3L92_02630 fabI; enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D H3L92_00995 acyl-CoA thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-]
D H3L92_06930 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D H3L92_01580 plsX; phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D H3L92_04420 plsY; glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D H3L92_09020 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D H3L92_00100 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D H3L92_01470 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:ndn01006]
D H3L92_11415 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D H3L92_12940 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D H3L92_11890 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D H3L92_05735 hpnD; presqualene diphosphate synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D H3L92_06565 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D H3L92_09500 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D H3L92_06210 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:ndn01007]
D H3L92_11725 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D H3L92_07700 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D H3L92_12485 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D H3L92_00115 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D H3L92_07950 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D H3L92_08980 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D H3L92_09290 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D H3L92_12050 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D H3L92_09700 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D H3L92_12875 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D H3L92_12375 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D H3L92_11705 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D H3L92_09320 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D H3L92_07985 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D H3L92_02565 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D H3L92_02585 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D H3L92_02865 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D H3L92_04165 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D H3L92_08830 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D H3L92_05200 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D H3L92_08970 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D H3L92_08950 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D H3L92_07180 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D H3L92_08425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D H3L92_03945 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D H3L92_01940 succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D H3L92_06485 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D H3L92_05280 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D H3L92_04790 acetylornithine/succinyldiaminopimelate transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D H3L92_03360 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D H3L92_00665 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D H3L92_05495 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D H3L92_09640 chorismate-binding protein K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D H3L92_06215 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D H3L92_00290 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ndn00194]
D H3L92_12360 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D H3L92_12355 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D H3L92_12350 atpG; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D H3L92_12345 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D H3L92_12340 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D H3L92_12335 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D H3L92_12330 atpE; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D H3L92_12325 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D H3L92_12320 ATP synthase subunit I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ndn03000]
D H3L92_03940 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D H3L92_00140 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D H3L92_11735 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D H3L92_10125 CysB family HTH-type transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D H3L92_07710 DeoR/GlpR transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D H3L92_08515 LacI family DNA-binding transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D H3L92_00715 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D H3L92_01345 TetR family transcriptional regulator K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D H3L92_08185 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D H3L92_09430 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D H3L92_03110 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D H3L92_07445 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D H3L92_12920 MarR family transcriptional regulator K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D H3L92_03755 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D H3L92_07890 fur; ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D H3L92_05775 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D H3L92_03925 helix-turn-helix domain-containing protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D H3L92_10130 fnr; fumarate/nitrate reduction transcriptional regulator Fnr K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D H3L92_06520 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D H3L92_01725 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D H3L92_11385 winged helix-turn-helix transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D H3L92_03680 SIS domain-containing protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D H3L92_08575 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D H3L92_04775 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D H3L92_07560 TOBE domain-containing protein K02019 modE; molybdate transport system regulatory protein
D H3L92_00470 putA; bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D H3L92_01280 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D H3L92_12315 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D H3L92_06780 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein
D H3L92_03080 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D H3L92_11230 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D H3L92_00325 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D H3L92_11155 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ndn03021]
D H3L92_12750 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D H3L92_10725 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D H3L92_10720 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D H3L92_04685 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D H3L92_01835 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D H3L92_06550 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D H3L92_09200 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D H3L92_08690 rpoN; RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor
D H3L92_03780 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D H3L92_02795 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D H3L92_10750 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D H3L92_09805 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D H3L92_09800 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D H3L92_06545 sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D H3L92_11230 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D H3L92_05670 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D H3L92_00870 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D H3L92_07570 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ndn03019]
D H3L92_08210 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D H3L92_10000 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D H3L92_02300 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D H3L92_04950 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D H3L92_00830 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D H3L92_00560 DEAD/DEAH box helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D H3L92_10960 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D H3L92_02460 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D H3L92_06410 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D H3L92_07570 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D H3L92_09465 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D H3L92_01130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D H3L92_04990 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D H3L92_02195 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D H3L92_09635 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D H3L92_06870 polynucleotide adenylyltransferase PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D H3L92_01450 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D H3L92_01775 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A
D H3L92_07835 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ
D H3L92_02425 DUF3418 domain-containing protein K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ndn03011]
D H3L92_07790 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D H3L92_11845 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D H3L92_12650 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D H3L92_12745 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D H3L92_12705 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D H3L92_05120 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D H3L92_12515 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D H3L92_12690 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D H3L92_00650 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D H3L92_12530 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D H3L92_12740 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D H3L92_12510 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D H3L92_12735 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D H3L92_12685 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D H3L92_02175 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D H3L92_09760 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D H3L92_12665 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D H3L92_05110 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D H3L92_12640 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D H3L92_09335 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D H3L92_01820 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D H3L92_10740 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D H3L92_12635 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D H3L92_12620 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D H3L92_12625 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D H3L92_12680 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D H3L92_12695 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D H3L92_05105 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D H3L92_10735 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D H3L92_10745 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D H3L92_10730 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D H3L92_00645 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D H3L92_12670 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D H3L92_12715 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D H3L92_12655 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D H3L92_12755 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D H3L92_12700 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D H3L92_09775 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D H3L92_08845 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D H3L92_12945 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D H3L92_12645 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D H3L92_12630 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D H3L92_12675 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D H3L92_12950 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D H3L92_08565 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D H3L92_12660 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D H3L92_12710 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D H3L92_10295 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D H3L92_12470 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D H3L92_01570 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D H3L92_08560 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D H3L92_13000 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D H3L92_08840 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D H3L92_10290 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D H3L92_12730 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D H3L92_01995 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D H3L92_00960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ndn03009]
D H3L92_02300 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D H3L92_00830 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D H3L92_02275 era; GTPase Era K03595 era; GTPase
D H3L92_09005 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D H3L92_11230 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D H3L92_03780 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D H3L92_02795 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D H3L92_10750 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D H3L92_02020 pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D H3L92_09050 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D H3L92_10810 rsmB; 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D H3L92_03560 RsmB/NOP family class I SAM-dependent RNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D H3L92_10955 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D H3L92_08190 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D H3L92_09460 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D H3L92_11150 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D H3L92_12910 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D H3L92_01555 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D H3L92_12975 class I SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D H3L92_04655 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D H3L92_02945 RlmE family RNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D H3L92_01005 rlmH; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D H3L92_05205 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D H3L92_07390 class I SAM-dependent methyltransferase K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D H3L92_10485 class I SAM-dependent RNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D H3L92_08010 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D H3L92_00510 rlmD; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D H3L92_12565 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D H3L92_07815 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D H3L92_08215 RluA family pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D H3L92_04610 rluD; 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D H3L92_04215 pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D H3L92_06470 rRNA pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D H3L92_09745 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D H3L92_09765 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D H3L92_12465 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D H3L92_02215 prmB; 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D H3L92_08210 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D H3L92_10000 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D H3L92_03085 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D H3L92_11310 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D H3L92_07975 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D H3L92_07830 ylqF; ribosome biogenesis GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D H3L92_01260 hflX; GTPase HflX K03665 hflX; GTPase
D H3L92_11600 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D H3L92_04690 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D H3L92_04270 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D H3L92_03775 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D H3L92_10235 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D H3L92_12835 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D H3L92_02595 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D H3L92_02940 yhbY; ribosome assembly RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D H3L92_09300 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein
D H3L92_08685 raiA; ribosome-associated translation inhibitor RaiA K05808 hpf; ribosome hibernation promoting factor
D H3L92_00130 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D H3L92_01565 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ndn03016]
D H3L92_04650 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D H3L92_11725 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D H3L92_04165 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D H3L92_09700 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D H3L92_12375 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D H3L92_12050 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D H3L92_07700 glutamine--tRNA ligase/YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D H3L92_09290 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D H3L92_11705 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D H3L92_09320 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D H3L92_05200 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D H3L92_08830 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D H3L92_02865 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D H3L92_08980 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D H3L92_12875 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D H3L92_07985 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D H3L92_08970 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D H3L92_08950 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D H3L92_00115 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D H3L92_07950 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D H3L92_09615 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D H3L92_06120 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D H3L92_03350 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D H3L92_11545 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D H3L92_08345 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D H3L92_04265 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D H3L92_06525 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D H3L92_11600 L-threonylcarbamoyladenylate synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D H3L92_06565 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D H3L92_11260 mnmE; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D H3L92_09925 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D H3L92_12995 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D H3L92_06355 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D H3L92_12440 RNB domain-containing ribonuclease K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D H3L92_08745 ettA; energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D H3L92_02565 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D H3L92_02585 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D H3L92_12485 gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D H3L92_05445 dusA; tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D H3L92_08580 dusB; tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D H3L92_04485 tRNA-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D H3L92_10165 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D H3L92_02160 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D H3L92_02080 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D H3L92_09770 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D H3L92_12150 trmL; tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D H3L92_04150 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D H3L92_11450 truC; tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D H3L92_12565 TIGR01621 family pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D H3L92_06925 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D H3L92_03415 ttcA; tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D H3L92_05705 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D H3L92_06540 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D H3L92_06440 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ
D H3L92_10700 queA; tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D H3L92_01675 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D H3L92_01670 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D H3L92_01660 7-carboxy-7-deazaguanine synthase QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D H3L92_12925 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D H3L92_08245 epoxyqueuosine reductase QueH K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D H3L92_07495 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D H3L92_06555 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D H3L92_09740 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D H3L92_01435 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D H3L92_02475 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D H3L92_05160 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D H3L92_04950 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D H3L92_06410 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D H3L92_11610 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:ndn03012]
D H3L92_03785 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D H3L92_08835 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D H3L92_02995 ATP-binding cassette domain-containing protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D H3L92_11850 elongation factor Ts K02357 tsf; elongation factor Ts
D H3L92_10765 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D H3L92_12525 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D H3L92_12520 fusA; elongation factor G K02355 fusA; elongation factor G
D H3L92_08930 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D H3L92_11885 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D H3L92_08810 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D H3L92_04325 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D H3L92_12725 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D H3L92_04365 efp; elongation factor P K02356 efp; elongation factor P
D H3L92_11030 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D H3L92_03970 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D H3L92_03385 ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:ndn03110]
D H3L92_08680 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D H3L92_07955 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D H3L92_08100 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D H3L92_09465 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D H3L92_05730 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D H3L92_01130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D H3L92_12365 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D H3L92_06385 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D H3L92_04625 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D H3L92_10285 hslO; Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33
D H3L92_09470 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D H3L92_05125 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D H3L92_01135 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D H3L92_05910 DegQ family serine endoprotease K04771 degP; serine protease Do [EC:3.4.21.107]
D H3L92_02950 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D H3L92_12325 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D H3L92_01025 molecular chaperone K07346 fimC; fimbrial chaperone protein
D H3L92_12560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D H3L92_10375 Spy/CpxP family protein refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy
D H3L92_07475 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D H3L92_09810 family 20 glycosylhydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D H3L92_05075 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D H3L92_04595 peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D H3L92_04915 SurA N-terminal domain-containing protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D H3L92_02815 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D H3L92_01795 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D H3L92_06160 peptidylprolyl isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D H3L92_06035 trxA; thioredoxin TrxA K03671 TXN; thioredoxin
D H3L92_08250 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D H3L92_12555 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D H3L92_01680 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D H3L92_01485 thiol:disulfide interchange protein DsbA/DsbL K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D H3L92_07860 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D H3L92_07870 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D H3L92_09040 dsbD; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:ndn04131]
D H3L92_08015 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D H3L92_12570 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D H3L92_11350 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D H3L92_04045 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D H3L92_10570 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D H3L92_10385 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:ndn03032]
D H3L92_08405 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D H3L92_04515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D H3L92_08945 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D H3L92_07785 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D H3L92_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D H3L92_05050 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D H3L92_01830 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D H3L92_02905 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D H3L92_09395 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D H3L92_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D H3L92_02860 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D H3L92_03425 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D H3L92_08240 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D H3L92_08340 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_08880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_12490 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_04225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D H3L92_12065 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D H3L92_12580 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D H3L92_02055 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D H3L92_03585 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D H3L92_03915 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D H3L92_12980 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D H3L92_00580 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D H3L92_02045 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D H3L92_10845 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ndn03036]
D H3L92_02300 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D H3L92_04515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D H3L92_08945 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D H3L92_07785 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D H3L92_06385 DnaJ domain-containing protein K05516 cbpA; curved DNA-binding protein
D H3L92_06380 MerR family transcriptional regulator K18997 cbpM; chaperone modulatory protein CbpM
D H3L92_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D H3L92_08575 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D H3L92_04990 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D H3L92_08185 Lrp/AsnC ligand binding domain-containing protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D H3L92_09430 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D H3L92_03110 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D H3L92_07445 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D H3L92_00900 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D H3L92_05165 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D H3L92_07820 SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D H3L92_11065 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D H3L92_02465 ftsB; cell division protein FtsB K05589 ftsB; cell division protein FtsB
D H3L92_11020 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D H3L92_11140 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D H3L92_08330 DNA translocase FtsK 4TM domain-containing protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D H3L92_02890 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D H3L92_11145 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D H3L92_11070 cell division protein FtsQ/DivIB K03589 ftsQ; cell division protein FtsQ
D H3L92_11090 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D H3L92_11025 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D H3L92_11060 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D H3L92_00635 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D H3L92_01170 zapD; cell division protein ZapD K18778 zapD; cell division protein ZapD
D H3L92_08020 AFG1 family ATPase K06916 zapE; cell division protein ZapE
D H3L92_02470 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D H3L92_01350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D H3L92_11750 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D H3L92_11745 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D H3L92_11740 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D H3L92_05405 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D H3L92_05410 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D H3L92_05415 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D H3L92_05425 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D H3L92_09790 ParA family protein K03496 parA; chromosome partitioning protein
D H3L92_12315 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D H3L92_00580 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D H3L92_02045 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D H3L92_09925 mnmG; tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D H3L92_09460 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D H3L92_08455 tyrosine recombinase K03733 xerC; integrase/recombinase XerC
D H3L92_02135 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D H3L92_10685 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D H3L92_12255 Fic family protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D H3L92_09980 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ndn03400]
D H3L92_02125 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D H3L92_10975 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D H3L92_07490 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D H3L92_07810 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D H3L92_05245 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D H3L92_08320 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D H3L92_07770 dut; dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D H3L92_09750 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D H3L92_09405 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D H3L92_00110 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D H3L92_08300 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D H3L92_09170 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D H3L92_08740 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D H3L92_02055 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D H3L92_12580 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D H3L92_03795 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D H3L92_03020 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D H3L92_00810 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D H3L92_11665 UvrD-helicase domain-containing protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D H3L92_10725 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D H3L92_10720 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D H3L92_12750 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D H3L92_04685 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D H3L92_05370 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D H3L92_11280 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D H3L92_05225 mutL; DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL
D H3L92_05680 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D H3L92_11410 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D H3L92_09395 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D H3L92_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D H3L92_02860 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D H3L92_03425 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D H3L92_08240 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D H3L92_08340 dnaQ; DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_08880 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_12490 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D H3L92_04225 dnaX; DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D H3L92_02905 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D H3L92_06885 recB; exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D H3L92_00565 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D H3L92_04795 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D H3L92_02290 recA; recombinase RecA K03553 recA; recombination protein RecA
D H3L92_12160 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D H3L92_03365 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D H3L92_10180 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D H3L92_00555 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D H3L92_05115 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D H3L92_03440 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D H3L92_08795 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D H3L92_06295 putative DNA binding domain-containing protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D H3L92_02075 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D H3L92_04640 recR; recombination protein RecR K06187 recR; recombination protein RecR
D H3L92_08085 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D H3L92_06420 rdgC; recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D H3L92_11575 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D H3L92_05330 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D H3L92_08925 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D H3L92_03915 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D H3L92_12980 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D H3L92_10845 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D H3L92_04515 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D H3L92_08575 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D H3L92_08945 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D H3L92_07785 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D H3L92_10960 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D H3L92_04475 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D H3L92_06370 recX; recombination regulator RecX K03565 recX; regulatory protein
D H3L92_05975 rep; DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D H3L92_11345 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D H3L92_05485 nrdA; ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D H3L92_05475 nrdB; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ndn03029]
D H3L92_09480 cytochrome bc complex cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D H3L92_03785 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D H3L92_08835 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D H3L92_11850 elongation factor Ts K02357 tsf; elongation factor Ts
D H3L92_10765 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D H3L92_12525 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D H3L92_12520 fusA; elongation factor G K02355 fusA; elongation factor G
D H3L92_02275 era; GTPase Era K03595 era; GTPase
D H3L92_00115 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D H3L92_12375 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D H3L92_09320 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D H3L92_09290 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D H3L92_05395 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D H3L92_04600 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D H3L92_05400 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D H3L92_02905 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D H3L92_11910 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D H3L92_09465 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D H3L92_09470 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D H3L92_01130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D H3L92_01135 groES; co-chaperone GroES K04078 groES; chaperonin GroES
D H3L92_12365 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D H3L92_06525 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D H3L92_04625 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D H3L92_01680 grxD; Grx4 family monothiol glutaredoxin K07390 grxD; monothiol glutaredoxin
D H3L92_10685 apbC; iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning
D H3L92_12985 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D H3L92_01225 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ndn02000]
D H3L92_02570 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D H3L92_00395 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D H3L92_12165 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D H3L92_02005 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D H3L92_07930 macB; MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D H3L92_00600 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D H3L92_04025 ABC transporter ATP-binding protein/permease K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D H3L92_03740 ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein
D H3L92_05265 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D H3L92_03805 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D H3L92_03885 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D H3L92_03880 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D H3L92_03875 sulfate/molybdate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D H3L92_03615 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D H3L92_03610 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D H3L92_03605 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D H3L92_11985 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D H3L92_11980 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D H3L92_11975 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D H3L92_12120 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D H3L92_10300 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D H3L92_09780 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D H3L92_09340 ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D H3L92_01445 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D H3L92_08115 ABC transporter permease subunit K11074 potI; putrescine transport system permease protein
D H3L92_08120 ABC transporter permease subunit K11075 potH; putrescine transport system permease protein
D H3L92_08125 potA; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D H3L92_02245 proW; glycine betaine/L-proline ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein
D H3L92_02240 proV; glycine betaine/L-proline ABC transporter ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D H3L92_11715 ABC transporter permease/substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D H3L92_11710 ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D H3L92_04095 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D H3L92_04105 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D H3L92_04090 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D H3L92_10640 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D H3L92_10645 mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D H3L92_10650 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D H3L92_06725 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D H3L92_10635 ABC transporter substrate-binding protein K07323 mlaC; phospholipid transport system substrate-binding protein
D H3L92_10630 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein
D H3L92_05175 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D H3L92_04020 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D H3L92_04015 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D H3L92_04010 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D H3L92_05095 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D H3L92_05085 ABC transporter permease subunit K10002 gltK; glutamate/aspartate transport system permease protein
D H3L92_05090 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein
D H3L92_05080 amino acid ABC transporter ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D H3L92_04820 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D H3L92_04815 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein
D H3L92_04810 amino acid ABC transporter ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D H3L92_00170 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D H3L92_00175 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D H3L92_00180 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D H3L92_03330 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D H3L92_03325 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D H3L92_03320 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein
D H3L92_03315 urtD; urea ABC transporter ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D H3L92_01645 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D H3L92_01650 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D H3L92_01655 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D H3L92_03040 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D H3L92_09620 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D H3L92_09045 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D H3L92_09250 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D H3L92_10355 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein
D H3L92_10360 oppC; oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein
D H3L92_10365 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D H3L92_10370 oppF; murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D H3L92_03870 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein
D H3L92_03865 ABC transporter permease K12369 dppB; dipeptide transport system permease protein
D H3L92_03860 ABC transporter permease subunit K12370 dppC; dipeptide transport system permease protein
D H3L92_03855 ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D H3L92_03850 ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D H3L92_10515 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein
D H3L92_06140 ABC transporter permease subunit K13894 yejB; microcin C transport system permease protein
D H3L92_06135 ABC transporter permease K13895 yejE; microcin C transport system permease protein
D H3L92_06040 ABC transporter ATP-binding protein K13896 yejF; microcin C transport system ATP-binding protein
D H3L92_00615 ABC transporter substrate-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D H3L92_00610 fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D H3L92_00620 ATP-binding cassette domain-containing protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D H3L92_09585 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D H3L92_09570 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein
D H3L92_09575 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein
D H3L92_09565 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D H3L92_06500 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D H3L92_06495 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D H3L92_06490 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D H3L92_06250 zinc ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D H3L92_06245 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D H3L92_06240 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D H3L92_01120 ABC transporter permease K09688 kpsM; capsular polysaccharide transport system permease protein
D H3L92_01115 capsule biosynthesis protein K10107 kpsE; capsular polysaccharide transport system permease protein
D H3L92_01125 ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D H3L92_04380 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D H3L92_04385 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D H3L92_08695 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D H3L92_05665 lipoprotein-releasing ABC transporter permease subunit K09808 lolC_E; lipoprotein-releasing system permease protein
D H3L92_05660 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D H3L92_11025 FtsX-like permease family protein K09811 ftsX; cell division transport system permease protein
D H3L92_11020 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D H3L92_11730 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D H3L92_12385 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D H3L92_05565 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D H3L92_11765 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D H3L92_05570 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D H3L92_04110 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D H3L92_05285 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D H3L92_07200 sugar porter family MFS transporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D H3L92_03670 sugar MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D H3L92_11040 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D H3L92_08645 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D H3L92_11650 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D H3L92_11655 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D H3L92_09905 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D H3L92_07345 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D H3L92_00160 multidrug effflux MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D H3L92_03095 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein
D H3L92_10080 DHA2 family efflux MFS transporter permease subunit K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D H3L92_08870 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D H3L92_10215 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D H3L92_10210 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D H3L92_03565 ptsP; phosphoenolpyruvate--protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D H3L92_03575 PTS transporter subunit EIIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D H3L92_10205 PTS mannose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D H3L92_07845 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D H3L92_12605 ammonium transporter K03320 amt; ammonium transporter, Amt family
D H3L92_03455 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D H3L92_09805 glutathione S-transferase N-terminal domain-containing protein K03599 sspA; stringent starvation protein A
D H3L92_09505 Bax inhibitor-1/YccA family protein K19416 yccA; modulator of FtsH protease
D H3L92_07195 formate/nitrite transporter family protein K21993 fdhC; formate transporter
D H3L92_07855 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D H3L92_08800 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D H3L92_01735 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D H3L92_01740 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D H3L92_04440 corA; magnesium/cobalt transporter CorA K03284 corA; magnesium transporter
D H3L92_06845 crcB; fluoride efflux transporter CrcB K06199 crcB; fluoride exporter
D H3L92_09390 porin K18133 K18133; major outer membrane protein P.IB
D H3L92_00905 OmpA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D H3L92_10790 transporter K06076 fadL; long-chain fatty acid transport protein
D H3L92_01030 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D H3L92_09605 FepA family TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D H3L92_01415 TonB-dependent siderophore receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D H3L92_06510 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D H3L92_09010 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D H3L92_00595 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D H3L92_01590 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D H3L92_04030 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D H3L92_00330 TolC family protein K12340 tolC; outer membrane protein
D H3L92_02000 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D H3L92_01360 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D H3L92_00230 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D H3L92_01110 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D H3L92_11910 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D H3L92_09185 bamC; outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC
D H3L92_04605 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D H3L92_07885 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE
D H3L92_11960 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA
D H3L92_11965 translocation/assembly module TamB K09800 tamB; translocation and assembly module TamB
D H3L92_08700 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D H3L92_08705 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D H3L92_06155 LPS-assembly protein LptD K04744 lptD; LPS-assembly protein
D H3L92_03420 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D H3L92_02590 CBS domain-containing protein K06189 corC; hemolysin (HlyC) family protein
D H3L92_09135 CidA/LrgA family protein K06518 cidA; holin-like protein
D H3L92_08510 MFS transporter K16211 malY; maltose/moltooligosaccharide transporter
D H3L92_10220 amino acid permease K11733 lysP; lysine-specific permease
D H3L92_03760 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D H3L92_03985 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D H3L92_12810 zupT; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D H3L92_00750 zinc permease K07238 TC.ZIP; zinc transporter, ZIP family
D H3L92_01355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D H3L92_00605 multidrug efflux SMR transporter K03297 emrE; small multidrug resistance pump
D H3L92_00815 EamA family transporter K08978 TC.BAT1; bacterial/archaeal transporter family protein
D H3L92_07540 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D H3L92_00550 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D H3L92_03115 EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D H3L92_04100 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D H3L92_01015 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D H3L92_08290 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D H3L92_05985 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D H3L92_00695 lactate permease LctP family transporter K03303 lutP; lactate permease
D H3L92_08815 betT; choline BCCT transporter BetT K02168 betT; choline/glycine/proline betaine transport protein
D H3L92_11300 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D H3L92_02555 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D H3L92_04840 cation acetate symporter K14393 actP; cation/acetate symporter
D H3L92_06075 cation acetate symporter K14393 actP; cation/acetate symporter
D H3L92_11955 sstT; serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D H3L92_08350 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D H3L92_00040 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D H3L92_09215 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter
D H3L92_04035 cation:proton antiporter K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D H3L92_00500 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D H3L92_08295 trkA; Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D H3L92_07800 uracil-xanthine permease K02824 uraA; uracil permease
D H3L92_09195 purine permease K16346 xanQ; xanthine permease XanQ
D H3L92_10710 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D H3L92_11305 benE; benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D H3L92_09030 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D H3L92_04920 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D H3L92_07550 chrA; chromate efflux transporter K07240 chrA; chromate transporter
D H3L92_06560 Na/Pi cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D H3L92_08385 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D H3L92_09385 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D H3L92_03920 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D H3L92_06435 AEC family transporter K13936 mdcF; malonate transporter and related proteins
D H3L92_01710 potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D H3L92_03980 LysE family transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D H3L92_03450 LysE family transporter K05835 rhtC; threonine efflux protein
D H3L92_10415 leuE; leucine efflux protein LeuE K11250 leuE; leucine efflux protein
D H3L92_03890 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump
D H3L92_03895 AzlD family protein K26606 azlD; branched chain amino acid efflux pump
D H3L92_06610 tripartite tricarboxylate transporter permease K07793 tctA; putative tricarboxylic transport membrane protein
D H3L92_06605 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D H3L92_06600 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D H3L92_12930 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter K09125 yhhQ; queuosine precursor transporter
D H3L92_05430 MarC family protein K05595 marC; multiple antibiotic resistance protein
D H3L92_11090 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D H3L92_12570 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D H3L92_11490 FTR1 family iron permease K07243 FTR; high-affinity iron transporter
D H3L92_11485 efeO; iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO
D H3L92_11475 efeB; deferrochelatase/peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D H3L92_05885 TonB family protein K03832 tonB; periplasmic protein TonB
D H3L92_11660 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_11620 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_11630 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D H3L92_10085 efflux RND transporter periplasmic adaptor subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D H3L92_02010 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D H3L92_00390 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D H3L92_01350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D H3L92_07925 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D H3L92_00220 polysaccharide biosynthesis tyrosine autokinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D H3L92_05135 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D H3L92_02855 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D H3L92_02850 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:ndn02044]
D H3L92_00330 TolC family protein K12340 tolC; outer membrane protein
D H3L92_02005 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D H3L92_02010 HlyD family type I secretion periplasmic adaptor subunit K12542 lapC; membrane fusion protein, adhesin transport system
D H3L92_02000 TolC family protein K12543 lapE; outer membrane protein, adhesin transport system
D H3L92_00390 HlyD family efflux transporter periplasmic adaptor subunit K13408 cvaA; membrane fusion protein
D H3L92_00395 peptidase domain-containing ABC transporter K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D H3L92_01160 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D H3L92_09155 pilin K02650 pilA; type IV pilus assembly protein PilA
D H3L92_09160 pilin K02650 pilA; type IV pilus assembly protein PilA
D H3L92_01150 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D H3L92_01155 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D H3L92_07920 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D H3L92_05025 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D H3L92_08005 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D H3L92_09940 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D H3L92_09945 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D H3L92_09950 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D H3L92_09955 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D H3L92_09960 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D H3L92_11250 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D H3L92_08370 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D H3L92_11255 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D H3L92_05040 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D H3L92_05035 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D H3L92_05030 pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D H3L92_10395 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D H3L92_08235 pilus assembly protein K02676 pilZ; type IV pilus assembly protein PilZ
D H3L92_05045 GspH/FimT family pseudopilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D H3L92_01265 LysM peptidoglycan-binding domain-containing protein K08086 fimV; pilus assembly protein FimV
D H3L92_11235 YggT family protein K02221 yggT; YggT family protein
D H3L92_08145 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D H3L92_10040 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D H3L92_11200 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D H3L92_00970 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D H3L92_06030 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D H3L92_07690 lytic transglycosylase domain-containing protein K03194 virB1; type IV secretion system protein VirB1
D H3L92_07685 TrbC/VirB2 family protein K03197 virB2; type IV secretion system protein VirB2
D H3L92_07680 VirB3 family type IV secretion system protein K03198 virB3; type IV secretion system protein VirB3
D H3L92_07675 VirB4 family type IV secretion/conjugal transfer ATPase K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D H3L92_07625 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D H3L92_07635 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D H3L92_07655 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D H3L92_07665 type IV secretion system protein K03201 virB6; type IV secretion system protein VirB6
D H3L92_07610 type IV secretion system protein K03203 virB8; type IV secretion system protein VirB8
D H3L92_07605 TrbG/VirB9 family P-type conjugative transfer protein K03204 virB9; type IV secretion system protein VirB9
D H3L92_07600 TrbI/VirB10 family protein K03195 virB10; type IV secretion system protein VirB10
D H3L92_07595 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D H3L92_10950 type IV secretory system conjugative DNA transfer family protein K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D H3L92_07870 DsbC family protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D H3L92_01025 molecular chaperone K07346 fimC; fimbrial chaperone protein
D H3L92_01030 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D H3L92_01020 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D H3L92_01035 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D H3L92_08615 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D H3L92_12560 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D H3L92_04065 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D H3L92_10755 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D H3L92_04060 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D H3L92_12850 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D H3L92_12720 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D H3L92_00475 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D H3L92_11015 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D H3L92_04070 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D H3L92_12985 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D H3L92_06115 tatA; Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D H3L92_06110 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D H3L92_06105 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ndn02042]
D H3L92_07850 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ndn02022]
D H3L92_04000 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D H3L92_04005 phoB; phosphate regulon transcriptional regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D H3L92_09345 sensor histidine kinase N-terminal domain-containing protein K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D H3L92_06085 HAMP domain-containing protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D H3L92_10555 two-component sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D H3L92_10560 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D H3L92_06090 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator
D H3L92_11635 type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D H3L92_11640 response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D H3L92_02265 histidine kinase K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3]
D H3L92_00980 response regulator transcription factor K08083 algR; two-component system, LytTR family, response regulator AlgR
D H3L92_10800 PAS domain-containing sensor histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D H3L92_10795 sigma-54-dependent Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D H3L92_00575 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D H3L92_00570 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D H3L92_08555 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D H3L92_08550 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
C 02035 Bacterial motility proteins [BR:ndn02035]
D H3L92_08555 Hpt domain-containing protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D H3L92_08545 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D H3L92_08550 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D H3L92_04820 amino acid ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D H3L92_00570 sigma-54-dependent Fis family transcriptional regulator K02667 pilR; two-component system, NtrC family, response regulator PilR
D H3L92_00575 HAMP domain-containing histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D H3L92_11250 type IV pilus twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D H3L92_08370 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D H3L92_11255 PilT/PilU family type 4a pilus ATPase K02670 pilU; twitching motility protein PilU
D H3L92_09155 pilin K02650 pilA; type IV pilus assembly protein PilA
D H3L92_09160 pilin K02650 pilA; type IV pilus assembly protein PilA
D H3L92_01150 pilB; type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D H3L92_01155 type II secretion system F family protein K02653 pilC; type IV pilus assembly protein PilC
D H3L92_01160 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D H3L92_08005 pilW; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D H3L92_09960 type IV pilus secretin PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D H3L92_09955 pilus assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D H3L92_09950 pilO; type 4a pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D H3L92_09945 PilN domain-containing protein K02663 pilN; type IV pilus assembly protein PilN
D H3L92_09940 pilM; type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D H3L92_08235 pilus assembly protein K02676 pilZ; type IV pilus assembly protein PilZ
D H3L92_05040 pilV; type IV pilus modification protein PilV K02671 pilV; type IV pilus assembly protein PilV
D H3L92_05035 prepilin-type N-terminal cleavage/methylation domain-containing protein K02672 pilW; type IV pilus assembly protein PilW
D H3L92_05030 pilus assembly protein K02673 pilX; type IV pilus assembly protein PilX
D H3L92_10395 hypothetical protein K02674 pilY1; type IV pilus assembly protein PilY1
D H3L92_07920 type IV pilin protein K02655 pilE; type IV pilus assembly protein PilE
D H3L92_05025 prepilin-type N-terminal cleavage/methylation domain-containing protein K02655 pilE; type IV pilus assembly protein PilE
D H3L92_01025 molecular chaperone K07346 fimC; fimbrial chaperone protein
D H3L92_01030 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein
D H3L92_01020 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D H3L92_01035 spore coat U domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ndn04812]
D H3L92_05405 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D H3L92_11060 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D H3L92_11065 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D H3L92_11750 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D H3L92_11745 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D H3L92_11740 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D H3L92_09790 ParA family protein K03496 parA; chromosome partitioning protein
D H3L92_12315 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ndn04147]
D H3L92_02460 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D H3L92_11350 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D H3L92_04045 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D H3L92_11455 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D H3L92_10385 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D H3L92_05075 peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D H3L92_09000 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D H3L92_01130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D H3L92_09465 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D H3L92_08520 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_03675 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D H3L92_02455 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D H3L92_10765 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D H3L92_12525 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D H3L92_06120 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D H3L92_10690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D H3L92_06930 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D H3L92_00020 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D H3L92_02295 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D H3L92_04675 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D H3L92_02270 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D H3L92_02025 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D H3L92_03245 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D H3L92_02335 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D H3L92_10305 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D H3L92_08175 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D H3L92_00055 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D H3L92_08570 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D H3L92_11285 M48 family metallopeptidase K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D H3L92_07505 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_02095 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_05800 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D H3L92_11565 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D H3L92_03695 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D H3L92_12845 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D H3L92_10570 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ndn02048]
D H3L92_11575 cas1; type II CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D H3L92_05330 cas1; CRISPR-associated endonuclease Cas1 K15342 cas1; CRISP-associated protein Cas1
D H3L92_11570 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D H3L92_05320 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D H3L92_05335 cas2; CRISPR-associated endonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2
D H3L92_11580 cas9; type II CRISPR RNA-guided endonuclease Cas9 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D H3L92_05365 cas10; type III-A CRISPR-associated protein Cas10/Csm1 K07016 csm1; CRISPR-associated protein Csm1
D H3L92_05360 csm2; type III-A CRISPR-associated protein Csm2 K19138 csm2; CRISPR-associated protein Csm2
D H3L92_05355 csm3; type III-A CRISPR-associated RAMP protein Csm3 K09002 csm3; CRISPR-associated protein Csm3
D H3L92_05350 CRISPR-associated protein Csm7 K19139 csm4; CRISPR-associated protein Csm4
D H3L92_05345 hypothetical protein K19140 csm5; CRISPR-associated protein Csm5
D H3L92_05315 csx16; CRISPR-associated protein Csx16 K19145 csx16; CRISPR-associated protein Csx16
D H3L92_11440 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D H3L92_06285 DEAD/DEAH box helicase family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D H3L92_06290 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D H3L92_11420 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D H3L92_06300 SAM-dependent DNA methyltransferase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D H3L92_12060 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D H3L92_12055 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D H3L92_11610 type II toxin-antitoxin system VapC family toxin K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D H3L92_11615 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB
D H3L92_02420 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB
D H3L92_11060 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D H3L92_05405 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D H3L92_00580 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D H3L92_02045 type IIA DNA topoisomerase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D H3L92_11725 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D H3L92_04850 hypothetical protein K19168 cptA; toxin CptA
D H3L92_05825 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D H3L92_06525 iscS; IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ndn01504]
D H3L92_01350 efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D H3L92_01355 efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D H3L92_01360 efflux transporter outer membrane subunit K18139 oprM; outer membrane protein, multidrug efflux system
D H3L92_03755 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D H3L92_00330 TolC family protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ndn00537]
D H3L92_12040 trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ndn03100]
D H3L92_11170 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_00950 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_08160 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_10060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_11215 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D H3L92_05690 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D H3L92_08885 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D H3L92_01910 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D H3L92_12785 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D H3L92_00540 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D H3L92_05500 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D H3L92_04395 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D H3L92_04555 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D H3L92_00785 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D H3L92_01980 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D H3L92_01985 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D H3L92_06415 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D H3L92_05685 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D H3L92_08890 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D H3L92_10775 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D H3L92_00790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D H3L92_00795 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D H3L92_00800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D H3L92_12790 tRNA-His K14226 tRNA-His; tRNA His
D H3L92_00945 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D H3L92_08165 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D H3L92_10065 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D H3L92_11220 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D H3L92_06795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_04955 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_01220 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_04960 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_12855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_00780 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D H3L92_10390 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D H3L92_11790 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D H3L92_00975 tRNA-Met K14230 tRNA-Met; tRNA Met
D H3L92_08610 tRNA-Ile K14230 tRNA-Met; tRNA Met
D H3L92_11165 tRNA-Met K14230 tRNA-Met; tRNA Met
D H3L92_01145 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D H3L92_01550 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D H3L92_08935 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D H3L92_12780 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D H3L92_04195 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D H3L92_03735 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D H3L92_03060 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D H3L92_03065 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D H3L92_10770 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D H3L92_06400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D H3L92_10760 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D H3L92_10780 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D H3L92_08825 tRNA-Val K14237 tRNA-Val; tRNA Val
D H3L92_04390 tRNA-Val K14237 tRNA-Val; tRNA Val
D H3L92_04560 tRNA-Val K14237 tRNA-Val; tRNA Val
D H3L92_00960 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D H3L92_01870 SDR family NAD(P)-dependent oxidoreductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D H3L92_04295 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D H3L92_04290 alpha-ketoacid dehydrogenase subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D H3L92_05390 PQQ-dependent sugar dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D H3L92_02040 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D H3L92_07280 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D H3L92_11830 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D H3L92_03200 zinc-binding alcohol dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D H3L92_04910 NAD(P)H-dependent oxidoreductase K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D H3L92_01370 NADH:flavin oxidoreductase/NADH oxidase K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D H3L92_03935 NAD(P)H-dependent oxidoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D H3L92_01520 msrAB; bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D H3L92_08450 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D H3L92_02115 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D H3L92_04800 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D H3L92_03475 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D H3L92_07940 Dyp-type peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D H3L92_02660 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D H3L92_04040 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D H3L92_05740 FAD-dependent oxidoreductase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D H3L92_01420 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D H3L92_04135 ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D H3L92_11465 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D H3L92_12500 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D H3L92_01815 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D H3L92_00855 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D H3L92_02675 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D H3L92_04205 tam; trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D H3L92_09205 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D H3L92_07895 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D H3L92_09725 DUF3488 domain-containing transglutaminase family protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D H3L92_02550 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D H3L92_08490 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D H3L92_03390 kinase/pyrophosphorylase K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D H3L92_10350 glnE; bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D H3L92_10175 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D H3L92_09515 aceK; bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D H3L92_07840 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D H3L92_05600 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D H3L92_10245 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D H3L92_01255 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D H3L92_02755 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D H3L92_06995 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D H3L92_10820 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D H3L92_10595 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D H3L92_01560 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D H3L92_09735 AAA family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D H3L92_03960 NAD(P)H-hydrate dehydratase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D H3L92_11520 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D H3L92_07740 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D H3L92_12860 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D H3L92_01790 RnfABCDGE type electron transport complex subunit B K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D H3L92_08460 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D H3L92_08465 NADH:ubiquinone reductase (Na(+)-transporting) subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D H3L92_08470 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D H3L92_08475 NADH:ubiquinone reductase (Na(+)-transporting) subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D H3L92_08480 nqrE; NADH:ubiquinone reductase (Na(+)-transporting) subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D H3L92_08485 nqrF; NADH:ubiquinone reductase (Na(+)-transporting) subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D H3L92_01890 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D H3L92_00710 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D H3L92_00700 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D H3L92_00705 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D H3L92_09680 fdhD; formate dehydrogenase accessory sulfurtransferase FdhD K02379 fdhD; FdhD protein
D H3L92_05725 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D H3L92_05470 2Fe-2S ferredoxin-like protein K11107 yfaE; ferredoxin
D H3L92_06530 iscU; Fe-S cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D H3L92_11560 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D H3L92_11535 DegV family EDD domain-containing protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D H3L92_11245 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D H3L92_02120 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D H3L92_00210 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A
D H3L92_00205 lapB; lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D H3L92_02765 heme biosynthesis protein HemY K02498 hemY; HemY protein
D H3L92_09150 phosphotransferase K03688 ubiB; ubiquinone biosynthesis protein
D H3L92_00135 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D H3L92_01500 accessory factor UbiK family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
C 99988 Secondary metabolism
D H3L92_03465 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D H3L92_01380 DoxX family protein K15977 K15977; putative oxidoreductase
D H3L92_02185 DoxX family protein K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D H3L92_08670 cold-shock protein K03704 cspA; cold shock protein
D H3L92_12610 P-II family nitrogen regulator K04752 glnK; nitrogen regulatory protein P-II 2
D H3L92_04525 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D H3L92_12390 ABC transporter ATP-binding protein/permease K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D H3L92_08675 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D H3L92_08375 trigger factor K03545 tig; trigger factor
D H3L92_09685 formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D H3L92_03285 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D H3L92_03280 urease accessory protein UreF K03188 ureF; urease accessory protein
D H3L92_03270 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D H3L92_03265 urease accessory protein UreD K03190 ureD; urease accessory protein
D H3L92_03275 HupE/UreJ family protein K03192 ureJ; urease accessory protein
D H3L92_08660 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D H3L92_01495 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein
D H3L92_05780 peptidase K07395 K07395; putative proteasome-type protease
D H3L92_01780 OsmC family protein K07397 yhfA; putative redox protein
D H3L92_09990 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D H3L92_02395 MGMT family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D H3L92_07530 radC; DNA repair protein RadC K03630 radC; DNA repair protein RadC
D H3L92_09380 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D H3L92_12905 YraN family protein K07460 yraN; putative endonuclease
D H3L92_11100 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D H3L92_00145 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease
D H3L92_10830 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D H3L92_04120 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D H3L92_06745 DUF927 domain-containing protein K06919 K06919; putative DNA primase/helicase
D H3L92_06750 toprim domain-containing protein K06919 K06919; putative DNA primase/helicase
D H3L92_07875 3'-5' exonuclease K07501 K07501; 3'-5' exonuclease
D H3L92_06650 IS5 family transposase K07481 K07481; transposase, IS5 family
D H3L92_07225 IS5 family transposase K07481 K07481; transposase, IS5 family
D H3L92_08260 IS5 family transposase K07481 K07481; transposase, IS5 family
D H3L92_00400 IS5 family transposase K07481 K07481; transposase, IS5 family
D H3L92_00985 IS5 family transposase K07481 K07481; transposase, IS5 family
D H3L92_01180 IS5 family transposase K07481 K07481; transposase, IS5 family
D H3L92_07370 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_10490 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_03505 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_03655 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_06005 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_06450 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_04240 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_05260 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_06935 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_07760 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_08070 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_10270 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_11775 helix-turn-helix domain-containing protein K07483 K07483; transposase
D H3L92_08785 IS110 family transposase K07486 K07486; transposase
D H3L92_01340 IS110 family transposase K07486 K07486; transposase
D H3L92_07525 IS1595 family transposase K07488 K07488; transposase
D H3L92_04245 IS1595 family transposase K07488 K07488; transposase
D H3L92_00120 transposase K07491 rayT; REP-associated tyrosine transposase
D H3L92_02430 transposase K07491 rayT; REP-associated tyrosine transposase
D H3L92_06940 IS3 family transposase K07497 K07497; putative transposase
D H3L92_07365 IS3 family transposase K07497 K07497; putative transposase
D H3L92_07755 IS3 family transposase K07497 K07497; putative transposase
D H3L92_08065 IS3 family transposase K07497 K07497; putative transposase
D H3L92_10275 IS3 family transposase K07497 K07497; putative transposase
D H3L92_10495 IS3 family transposase K07497 K07497; putative transposase
D H3L92_10545 transposase K07497 K07497; putative transposase
D H3L92_11770 IS3 family transposase K07497 K07497; putative transposase
D H3L92_00075 IS3 family transposase K07497 K07497; putative transposase
D H3L92_00770 IS3 family transposase K07497 K07497; putative transposase
D H3L92_00895 IS3 family transposase K07497 K07497; putative transposase
D H3L92_03500 transposase K07497 K07497; putative transposase
D H3L92_03650 IS3 family transposase K07497 K07497; putative transposase
D H3L92_04235 IS3 family transposase K07497 K07497; putative transposase
D H3L92_04360 IS3 family transposase K07497 K07497; putative transposase
D H3L92_05255 IS3 family transposase K07497 K07497; putative transposase
D H3L92_06000 IS3 family transposase K07497 K07497; putative transposase
D H3L92_06455 IS3 family transposase K07497 K07497; putative transposase
D H3L92_07150 site-specific integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D H3L92_04340 PspA/IM30 family protein K03969 pspA; phage shock protein A
D H3L92_07500 rhodanese-like domain-containing protein K03972 pspE; phage shock protein E
D H3L92_04230 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D H3L92_09920 multidrug efflux RND transporter permease subunit K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D H3L92_11795 BCCT family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D H3L92_08865 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D H3L92_09065 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D H3L92_07745 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D H3L92_10100 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D H3L92_11820 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D H3L92_12590 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D H3L92_03375 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D H3L92_04725 NCS1 family nucleobase:cation symporter-1 K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D H3L92_02110 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D H3L92_08360 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D H3L92_09220 DASS family sodium-coupled anion symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D H3L92_02990 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D H3L92_01270 septation protein A K06190 ispZ; intracellular septation protein
D H3L92_11645 hemerythrin domain-containing protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D H3L92_07455 peptidoglycan DD-metalloendopeptidase family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D H3L92_05510 carbon starvation protein A K06200 cstA; carbon starvation protein
D H3L92_05525 carbon starvation protein A K06200 cstA; carbon starvation protein
D H3L92_06900 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D H3L92_08040 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D H3L92_03340 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D H3L92_12495 cyclic nucleotide-binding domain-containing protein K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D H3L92_05220 lolA; outer membrane lipoprotein chaperone LolA K03634 lolA; outer membrane lipoprotein carrier protein
D H3L92_01970 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D H3L92_10625 VacJ family lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D H3L92_11915 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D H3L92_02680 peptidoglycan DD-metalloendopeptidase family protein K06194 nlpD; lipoprotein NlpD
D H3L92_02495 M23 family metallopeptidase K12943 ygeR; lipoprotein YgeR
D H3L92_01065 capsule biosynthesis protein K07265 kpsS; capsular polysaccharide export protein
D H3L92_01070 capsular polysaccharide biosynthesis protein K07266 kpsC; capsular polysaccharide export protein
D H3L92_07395 DUF560 domain-containing protein K07280 K07280; outer membrane protein
D H3L92_12425 HlyD family efflux transporter periplasmic adaptor subunit K01993 ABC-2.TX; HlyD family secretion protein
D H3L92_12000 glycine zipper 2TM domain-containing protein K04062 osmB; osmotically inducible lipoprotein OsmB
D H3L92_08000 DUF4115 domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D H3L92_05170 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D H3L92_06945 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D H3L92_11760 TerC family protein K05794 terC; tellurite resistance protein TerC
D H3L92_03595 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D H3L92_10105 apaG; Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D H3L92_10665 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D H3L92_06505 hemin-degrading factor K07225 hmuS; putative hemin transport protein
D H3L92_01715 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D H3L92_04865 CvpA family protein K03558 cvpA; membrane protein required for colicin V production
D H3L92_04885 pqiB; intermembrane transport protein PqiB K06192 pqiB; paraquat-inducible protein B
D H3L92_05990 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D H3L92_11105 group II truncated hemoglobin K06886 glbN; hemoglobin
D H3L92_12090 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D H3L92_04415 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D H3L92_10380 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D H3L92_12115 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D H3L92_01635 erpA; iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D H3L92_12445 YihY family inner membrane protein K07058 K07058; membrane protein
D H3L92_02490 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D H3L92_12200 VOC family protein K04750 phnB; PhnB protein
D H3L92_00660 LemA family protein K03744 lemA; LemA protein
D H3L92_01205 LemA family protein K03744 lemA; LemA protein
D H3L92_04895 LemA family protein K03744 lemA; LemA protein
D H3L92_01010 SlyX family protein K03745 slyX; SlyX protein
D H3L92_10835 DUF494 family protein K03747 smg; Smg protein
D H3L92_03580 DedA family protein K03975 dedA; membrane-associated protein
D H3L92_04890 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D H3L92_06430 DUF1440 domain-containing protein K08996 yagU; putative membrane protein
D H3L92_11270 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D H3L92_01210 TPM domain-containing protein K06872 K06872; uncharacterized protein
D H3L92_07310 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D H3L92_06275 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D H3L92_03195 nuclear transport factor 2 family protein K06893 K06893; uncharacterized protein
D H3L92_02690 ATP-binding protein K06923 K06923; uncharacterized protein
D H3L92_09785 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein
D H3L92_00525 ATP/GTP-binding protein K06945 K06945; uncharacterized protein
D H3L92_09690 N-acetyltransferase K06975 K06975; uncharacterized protein
D H3L92_03730 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D H3L92_09595 alpha/beta hydrolase K07017 K07017; uncharacterized protein
D H3L92_05890 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D H3L92_05970 alpha/beta fold hydrolase K07019 K07019; uncharacterized protein
D H3L92_08140 VOC family protein K07032 K07032; uncharacterized protein
D H3L92_04155 YecA family protein K07039 K07039; uncharacterized protein
D H3L92_02260 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein
D H3L92_02190 nitroreductase family protein K07078 K07078; uncharacterized protein
D H3L92_02835 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D H3L92_03900 TSUP family transporter K07090 K07090; uncharacterized protein
D H3L92_06045 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D H3L92_00090 PhoX family phosphatase K07093 K07093; uncharacterized protein
D H3L92_07945 metallophosphoesterase K07098 K07098; uncharacterized protein
D H3L92_01575 phosphoribosyltransferase K07101 K07101; uncharacterized protein
D H3L92_08920 NAD(P)H-binding protein K07118 K07118; uncharacterized protein
D H3L92_06620 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein
D H3L92_07340 sel1 repeat family protein K07126 K07126; uncharacterized protein
D H3L92_12460 sel1 repeat family protein K07126 K07126; uncharacterized protein
D H3L92_03445 sel1 repeat family protein K07126 K07126; uncharacterized protein
D H3L92_04345 sel1 repeat family protein K07126 K07126; uncharacterized protein
D H3L92_00535 roadblock/LC7 domain-containing protein K07131 K07131; uncharacterized protein
D H3L92_06405 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D H3L92_09535 DUF554 domain-containing protein K07150 K07150; uncharacterized protein
D H3L92_12990 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D H3L92_01825 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D H3L92_08035 PFL family protein K09157 K09157; uncharacterized protein
D H3L92_04505 DUF493 domain-containing protein K09158 K09158; uncharacterized protein
D H3L92_01275 YciI family protein K09780 K09780; uncharacterized protein
D H3L92_09210 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D H3L92_09440 YbaN family protein K09790 K09790; uncharacterized protein
D H3L92_06055 Trm112 family protein K09791 K09791; uncharacterized protein
D H3L92_04310 sulfite exporter TauE/SafE family protein K09792 K09792; uncharacterized protein
D H3L92_07165 DUF456 family protein K09793 K09793; uncharacterized protein
D H3L92_03835 YdcH family protein K09794 K09794; uncharacterized protein
D H3L92_04320 RnfH family protein K09801 K09801; uncharacterized protein
D H3L92_08495 nqrM; (Na+)-NQR maturation NqrM K05952 K05952; uncharacterized protein
D H3L92_04880 membrane integrity-associated transporter subunit PqiC K09857 K09857; uncharacterized protein
D H3L92_03070 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D H3L92_01175 yacG; DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein
D H3L92_06880 YihD family protein K09896 K09896; uncharacterized protein
D H3L92_10160 DUF1043 family protein K09908 K09908; uncharacterized protein
D H3L92_05875 DUF484 family protein K09921 K09921; uncharacterized protein
D H3L92_06060 DUF2059 domain-containing protein K09924 K09924; uncharacterized protein
D H3L92_04710 FixH family protein K09926 K09926; uncharacterized protein
D H3L92_07465 DUF2062 domain-containing protein K09928 K09928; uncharacterized protein
D H3L92_01400 putative DNA-binding domain-containing protein K09929 K09929; uncharacterized protein
D H3L92_01395 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D H3L92_09435 DUF1415 domain-containing protein K09941 K09941; uncharacterized protein
D H3L92_12005 hypothetical protein K09943 K09943; uncharacterized protein
D H3L92_05765 YegP family protein K09946 K09946; uncharacterized protein
D H3L92_02165 DUF1853 family protein K09977 K09977; uncharacterized protein
D H3L92_09530 pyridoxamine 5'-phosphate oxidase family protein K09979 K09979; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 26, 2024