+D GENES KO
#
KEGG Orthology (KO) - Nonlabens dokdonensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ndo00010]
D DDD_0910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DDD_3413 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DDD_1798 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DDD_1846 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DDD_0050 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DDD_2575 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_3412 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_0585 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_1429 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DDD_3316 putative phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DDD_2044 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DDD_0513 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DDD_1276 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DDD_1503 ppsA-1; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DDD_2015 pdhA; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DDD_1031 pdhB; pyruvate 2-oxoglutarate dehydrogenase beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DDD_2016 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3297 zinc-type alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DDD_2147 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_3221 cinnamyl-alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_3172 chloroacetaldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D DDD_0481 acsA; acyl-coenzyme A synthetases/AMP-(Fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DDD_3247 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DDD_1064 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:ndo00020]
D DDD_0510 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DDD_2383 aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DDD_0127 isocitrate dehydrogenase, NADP-dependent, monomeric-type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DDD_3486 leuB-2; isocitrate dehydrogenase (NADP) (Oxalosuccinatedecarboxylase) (Idh) (Nadp(+)-specific icdh) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DDD_1715 kgd; 2-oxoglutarate dehydrogenase, dehydrogenase (E1) component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DDD_0453 bfmBB; lipoamide acyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_1716 sucB; 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_2198 pdhC; putative dihydrolipoamide acyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_2884 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DDD_2866 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DDD_1537 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DDD_1538 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur binding subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DDD_1536 sdhC; putative succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DDD_3398 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DDD_0422 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DDD_1064 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DDD_2015 pdhA; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DDD_1031 pdhB; pyruvate 2-oxoglutarate dehydrogenase beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DDD_2016 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ndo00030]
D DDD_0910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DDD_1914 ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DDD_0219 transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DDD_0220 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DDD_2782 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DDD_1406 rpiB; sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DDD_0208 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D DDD_3247 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DDD_0648 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DDD_1001 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DDD_0357 gluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D DDD_3127 FAD dependent oxidoreductase K19813 gdh; glucose dehydrogenase [EC:1.1.5.9]
D DDD_0358 putative gluconate kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D DDD_1846 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DDD_1798 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DDD_3413 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ndo00040]
D DDD_0329 pectin degradation protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D DDD_0340 5-keto-4-deoxyuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D DDD_0346 glucouronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D DDD_0339 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D DDD_3558 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DDD_2147 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_1914 ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:ndo00051]
D DDD_0901 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DDD_2756 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DDD_3007 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DDD_3579 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DDD_1444 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DDD_1445 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DDD_3413 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DDD_1798 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DDD_0327 alginate (Poly beta-D-mannuronate) lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D DDD_0353 putative alginate lyase K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D DDD_1846 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DDD_0050 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DDD_1406 rpiB; sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ndo00052]
D DDD_1940 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DDD_3247 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DDD_0332 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D DDD_3413 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DDD_0786 alpha-glucosidase, family 31 of glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:ndo00053]
D DDD_3558 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DDD_2147 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:ndo00500]
D DDD_0786 alpha-glucosidase, family 31 of glycosyl hydrolase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D DDD_2365 putative glycosyl hydrolase K01210 E3.2.1.58; glucan 1,3-beta-glucosidase [EC:3.2.1.58]
D DDD_2367 periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DDD_0789 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D DDD_0790 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DDD_1214 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DDD_0788 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DDD_2505 glycosyl hydrolase catalytic region, alpha-amylase family K01176 AMY; alpha-amylase [EC:3.2.1.1]
D DDD_0978 alpha-amylase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D DDD_0980 susB; putative alpha-glucosidase K21574 susB; glucan 1,4-alpha-glucosidase [EC:3.2.1.3]
D DDD_0981 glycosyl hydrolase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D DDD_0982 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D DDD_3247 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DDD_0910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ndo00520]
D DDD_3087 glycoside hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DDD_3609 beta-acetylhexosaminidase/precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D DDD_1212 glmS; glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DDD_3522 murQ; sugar phosphate isomerase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D DDD_1938 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D DDD_2904 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DDD_0581 UDP-N-acetylmuramate reductase/dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DDD_2293 N-acetylneuraminic acid phosphate synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132]
D DDD_2286 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DDD_1172 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D DDD_3560 wbpP; UDP-glucose 4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D DDD_3559 UDP-glucose/GDP-mannose dehydrogenase family protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D DDD_3543 fnlA; FnlA protein involved in UDP-L-FucpNAc biosynthesis (A nucleotide sugar for antigen-O biosynthesis) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D DDD_3553 putative UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D DDD_3554 N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D DDD_3551 CMP-N-acetlyneuraminic acid synthetase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D DDD_3247 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DDD_3558 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DDD_1940 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DDD_0910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DDD_0901 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DDD_2756 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DDD_3007 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DDD_3579 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DDD_1444 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DDD_3556 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D DDD_1445 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DDD_0789 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ndo00620]
D DDD_0481 acsA; acyl-coenzyme A synthetases/AMP-(Fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DDD_2015 pdhA; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DDD_1031 pdhB; pyruvate 2-oxoglutarate dehydrogenase beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DDD_2016 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3297 zinc-type alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DDD_2147 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_3221 cinnamyl-alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_0137 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DDD_0136 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DDD_1276 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DDD_0214 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DDD_1226 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DDD_1224 accC; acetyl-CoA carboxylase biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DDD_1845 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_3172 chloroacetaldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D DDD_0776 zinc dependent hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DDD_0305 metallo beta lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DDD_1077 maeB; malate dehydrogenase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DDD_0422 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DDD_3398 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DDD_3148 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D DDD_1064 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D DDD_1503 ppsA-1; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ndo00630]
D DDD_0481 acsA; acyl-coenzyme A synthetases/AMP-(Fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DDD_0422 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DDD_0510 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DDD_2383 aconitase A K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DDD_1479 lactoylglutathione lyase (Glyoxalase I) K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DDD_3355 mutA; putative methylmalonyl-CoA mutase small subunit (MCM-beta) K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DDD_3360 mutB; methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DDD_2775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DDD_2333 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DDD_2472 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DDD_3461 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_1074 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DDD_0357 gluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:ndo00640]
D DDD_0481 acsA; acyl-coenzyme A synthetases/AMP-(Fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DDD_0480 prpE; acyl-coenzyme A synthetase, AMP-(Fatty) acid ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D DDD_0137 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DDD_0136 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DDD_2200 putative pyruvate/2-oxoglutarate dehydrogenase, El component: transketolase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DDD_3159 oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_0071 acyl-CoA oxidase domain-containing protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D DDD_0214 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DDD_1226 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DDD_1224 accC; acetyl-CoA carboxylase biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DDD_1845 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DDD_1479 lactoylglutathione lyase (Glyoxalase I) K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DDD_3355 mutA; putative methylmalonyl-CoA mutase small subunit (MCM-beta) K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DDD_3360 mutB; methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DDD_2866 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DDD_2884 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:ndo00650]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DDD_2182 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DDD_2587 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DDD_2658 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DDD_1669 crt; enoylase-CoA hydratase/isomerase family K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D DDD_1537 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DDD_1538 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur binding subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DDD_1536 sdhC; putative succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DDD_3304 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DDD_2975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DDD_2164 mvaB; hydroxymethylglutaryl-CoA lyase, HMGL-like family K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DDD_1364 succinyl-CoA, 3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D DDD_1362 scoB; succinyl-CoA, 3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
C 00660 C5-Branched dibasic acid metabolism
D DDD_2866 sucC; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DDD_2884 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism
D DDD_0050 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ndo00190]
D DDD_3570 ndh; NADH:quinone dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DDD_1537 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DDD_1538 sdhB; succinate dehydrogenase/fumarate reductase, iron-sulfur binding subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DDD_1536 sdhC; putative succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DDD_1602 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DDD_1599 hypothetical protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D DDD_1600 cyoC; cytochrome oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D DDD_1601 ctaE; cytochrome oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D DDD_1084 ctaD; heme/copper-type cytochrome/quinol oxidase, subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D DDD_1085 ctaC; cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D DDD_2670 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DDD_0196 ccoN; putative cytochrome oxidase subunit (Cbb3-type) K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D DDD_0197 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D DDD_0198 ccoP; cytochrome c oxidase (Chain III) K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D DDD_1344 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DDD_1211 atpB; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DDD_1342 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DDD_1346 atpD; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DDD_1210 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DDD_1349 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DDD_1347 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DDD_1348 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DDD_3576 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D DDD_3281 ppk2; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DDD_2608 ppk1; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ndo00680]
D DDD_2333 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DDD_0513 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DDD_3148 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D DDD_0422 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DDD_1846 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DDD_1798 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DDD_3413 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DDD_3081 Fe-S oxidoreductase (Ferredoxin) K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D DDD_0137 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DDD_0136 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DDD_0481 acsA; acyl-coenzyme A synthetases/AMP-(Fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DDD_1503 ppsA-1; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DDD_3316 putative phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DDD_2044 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DDD_3372 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DDD_1805 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DDD_3370 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:ndo00910]
D DDD_0180 npd; 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DDD_1992 amidohydrolase/nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D DDD_0754 gdhA1; NAD dependent Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D DDD_0921 gdhA2; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DDD_2775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DDD_2778 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D DDD_2128 prokaryotic-type carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ndo00920]
D DDD_2265 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D DDD_2264 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DDD_2263 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DDD_2261 CysQ, sulfite synthesis pathway protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DDD_3276 phosphoesterase, DHH family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ndo00061]
D DDD_0214 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DDD_1226 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DDD_1224 accC; acetyl-CoA carboxylase biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DDD_1845 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DDD_1272 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DDD_3149 acyl carrier protein K02078 acpP; acyl carrier protein
D DDD_1722 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DDD_2461 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DDD_1227 fabH1; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DDD_2095 fabH2; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DDD_3150 putative oxidoreductase-dehydrogenase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DDD_1273 fabF; 3-oxoacyl-(Acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DDD_1197 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DDD_2056 short-chain dehydrogenases/reductases family (SDR) protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_2885 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_2710 putative dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_3153 fabZ; putative acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DDD_2879 UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D DDD_3593 fabI; enoylase-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DDD_0028 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D DDD_3154 putative dehydrogenase/reductase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D DDD_1638 acyl-[acyl-carrier-protein] desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D DDD_3025 fadD; long-chain-fatty-acid--CoA ligase (Synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ndo00071]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DDD_2657 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DDD_2658 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DDD_0071 acyl-CoA oxidase domain-containing protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D DDD_0893 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DDD_3025 fadD; long-chain-fatty-acid--CoA ligase (Synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DDD_1421 alkane-1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D DDD_3297 zinc-type alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ndo00561]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_2147 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_3221 cinnamyl-alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_1637 1-acyl-sn-glycerol-3-phosphate acetyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DDD_1492 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DDD_3517 dgkA; putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:ndo00564]
D DDD_1149 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DDD_1637 1-acyl-sn-glycerol-3-phosphate acetyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DDD_1492 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DDD_3517 dgkA; putative diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D DDD_0572 cdsA; CDP-diglyceride transferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DDD_0085 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DDD_0573 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DDD_2625 cardiolipin synthetase, phospholipase D/transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D DDD_2909 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:ndo00600]
D DDD_2363 glycosyl hydrolase, family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
D DDD_0332 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D DDD_3609 beta-acetylhexosaminidase/precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D DDD_0067 aminopeptidase, peptidase M1 family K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ndo00592]
D DDD_0071 acyl-CoA oxidase domain-containing protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D DDD_2657 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ndo01040]
D DDD_2928 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DDD_1638 acyl-[acyl-carrier-protein] desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D DDD_0071 acyl-CoA oxidase domain-containing protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D DDD_3481 GDSL-like lipase/acylhydrolase domain protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ndo00230]
D DDD_3093 putative ADP-ribose pyrophosphatase protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DDD_3247 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DDD_0648 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DDD_1001 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DDD_1104 glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DDD_1372 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DDD_1271 purN; phosphoribosylglycinamide formyltransferase, PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DDD_3300 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D DDD_2767 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DDD_2020 phosphoribosylaminoimidazole carboxylase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D DDD_2478 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DDD_2972 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DDD_2431 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DDD_1984 purH; phosphoribosylaminoimidazole carboxy formyl formyltransferase, bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DDD_0177 adenine phosphoribosyltransferase (APRT) K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DDD_3603 putative phosphoesterase, 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D DDD_2032 surE; acid phosphatase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DDD_1897 punA; purine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DDD_2245 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DDD_3275 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DDD_3392 nucleoside-triphosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DDD_2338 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DDD_1659 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DDD_1025 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DDD_1024 ribonucleoside-diphosphate reductase small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DDD_1778 deoxyguanosinetriphosphate (DGTP) triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D DDD_3403 relA; GTP pyrophosphokinase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DDD_2609 putative phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DDD_1280 CYTH domain adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DDD_3405 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DDD_1496 dnk; deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D DDD_2021 adk; putative adenylate kinase/hypoxanthine phosphoribosyltransferase fusion protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D DDD_2263 adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DDD_2265 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D DDD_2264 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:ndo00240]
D DDD_3272 carB; carbamoyl-phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DDD_0514 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DDD_3309 pyrB; aspartate carbamoyltransferase catalytic chain (Aspartate transcarbamylase) (ATCase) K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DDD_3049 amidohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DDD_1060 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DDD_2158 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D DDD_0566 pyrE; orotate phosphoribosyltransferase (OPRTase) K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DDD_2760 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DDD_1021 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DDD_3275 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DDD_3384 maf; Maf-like protein implicated in septum formation K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DDD_2344 pyrG; CTP synthase (UTP--ammonia ligase) K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DDD_2678 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DDD_3353 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D DDD_3603 putative phosphoesterase, 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D DDD_2032 surE; acid phosphatase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DDD_3280 purine nucleoside phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D DDD_2400 pyrimidine operon regulatory phosphoribosyl transferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DDD_3310 pyrR; phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DDD_2014 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D DDD_1025 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DDD_1024 ribonucleoside-diphosphate reductase small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DDD_1496 dnk; deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D DDD_1918 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DDD_1543 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DDD_1333 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D DDD_1038 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DDD_1138 short-chain dehydrogenases/reductases family (SDR) protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ndo00250]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1928 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DDD_1523 L-asparaginase I K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DDD_3458 ybiK; peptidase T2, asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DDD_0592 asnB; asparagine synthetase B, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DDD_1511 putative amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D DDD_2872 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DDD_2737 putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DDD_3405 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DDD_2431 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DDD_3309 pyrB; aspartate carbamoyltransferase catalytic chain (Aspartate transcarbamylase) (ATCase) K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DDD_3304 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DDD_2975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DDD_0754 gdhA1; NAD dependent Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D DDD_0921 gdhA2; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DDD_1862 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D DDD_2775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DDD_3272 carB; carbamoyl-phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DDD_0514 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DDD_1212 glmS; glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DDD_1104 glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ndo00260]
D DDD_3258 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DDD_1800 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DDD_3291 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D DDD_1330 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DDD_3292 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D DDD_3293 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DDD_3004 beta-eliminating lyase protein K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DDD_2333 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DDD_3316 putative phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DDD_2044 phosphoglyceromutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D DDD_3372 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DDD_1805 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DDD_3370 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DDD_1138 short-chain dehydrogenases/reductases family (SDR) protein K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D DDD_3496 aminocarboxylic acid CoA-ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DDD_1100 kbl; glycine C-acetyltransferase (2-amino-3-ketobutyrate CoA ligase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DDD_2472 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DDD_3461 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_1074 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DDD_0085 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DDD_2061 cystathionine beta-synthase, cystein synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D DDD_3497 cysteine synthase (Beta-pyrazolylalanine synthase) K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D DDD_2733 L-serine dehydratase (Deaminase) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DDD_0600 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DDD_0599 trpB; tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ndo00270]
D DDD_0134 Cys/Met metabolism PLP-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DDD_1129 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DDD_2061 cystathionine beta-synthase, cystein synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D DDD_3497 cysteine synthase (Beta-pyrazolylalanine synthase) K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D DDD_1817 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DDD_1818 5-methyltetrahydrofolate:homocysteine methyltransferase-cobalamin binding domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DDD_1811 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DDD_1693 Cys/Met metabolism PLP-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D DDD_0879 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D DDD_3194 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_3301 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_1515 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DDD_2211 putative pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D DDD_3258 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DDD_1800 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DDD_3291 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D DDD_1330 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DDD_2842 ilvE; putative 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_3342 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_3067 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_0422 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DDD_2733 L-serine dehydratase (Deaminase) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DDD_3372 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DDD_1805 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DDD_3370 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ndo00280]
D DDD_2842 ilvE; putative 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_3342 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_0408 Glu/Leu/Phe/Val dehydrogenase, C terminal K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D DDD_2200 putative pyruvate/2-oxoglutarate dehydrogenase, El component: transketolase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DDD_3159 oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_2657 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DDD_1479 lactoylglutathione lyase (Glyoxalase I) K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D DDD_3355 mutA; putative methylmalonyl-CoA mutase small subunit (MCM-beta) K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DDD_3360 mutB; methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_2407 acetyl-CoA carboxylase, beta subunit K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D DDD_2164 mvaB; hydroxymethylglutaryl-CoA lyase, HMGL-like family K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DDD_1364 succinyl-CoA, 3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D DDD_1362 scoB; succinyl-CoA, 3-ketoacid-coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ndo00290]
D DDD_2842 ilvE; putative 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_3342 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_0408 Glu/Leu/Phe/Val dehydrogenase, C terminal K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:ndo00300]
D DDD_3258 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DDD_1800 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DDD_3291 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D DDD_1330 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DDD_3599 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DDD_2855 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DDD_0381 dapD; 2, 3, 4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D DDD_3526 argD; aminotransferase class-III family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DDD_2580 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DDD_1903 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DDD_2865 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DDD_0802 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DDD_2010 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ndo00310]
D DDD_1150 pcd; piperideine-6-carboxylate dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D DDD_0453 bfmBB; lipoamide acyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_1716 sucB; 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_2198 pdhC; putative dihydrolipoamide acyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_0893 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DDD_3304 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DDD_2975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ndo00220]
D DDD_2775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DDD_3272 carB; carbamoyl-phosphate synthase K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DDD_0514 carA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DDD_0754 gdhA1; NAD dependent Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D DDD_0921 gdhA2; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_3526 argD; aminotransferase class-III family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ndo00330]
D DDD_1959 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D DDD_1958 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_2581 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D DDD_2253 gatA; putative glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DDD_0371 oat; ornithine/acetylornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D DDD_2047 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DDD_2869 proline oxidase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D DDD_1862 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ndo00340]
D DDD_0605 hisG; ATP phosphoribosyltransferase (ATP-PRTase) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DDD_0616 hisIE; histidine biosynthesis bifunctional protein (Phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase) K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D DDD_0611 hisA; 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D DDD_0610 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase class-I subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DDD_0613 hisF; imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DDD_0609 hisB; imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D DDD_0607 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DDD_0606 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D DDD_2596 hutH; histidine ammonia-lyase (Histidase) K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D DDD_2208 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D DDD_0133 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D DDD_0132 arginase family protein K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_1043 DUF2260 domain containing protein K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:ndo00350]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_0607 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DDD_0906 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D DDD_0904 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D DDD_2334 fumarylacetoacetate (FAA) hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D DDD_3297 zinc-type alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DDD_3304 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DDD_2975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ndo00360]
D DDD_0620 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D DDD_2184 paaD; phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D DDD_2171 paaA; phenylacetic acid degradation protein paaA K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D DDD_2172 paaB; phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D DDD_2174 paaC; phenylacetic acid degradation protein, paaC K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D DDD_2176 paaJ; phenylacetic acid degradation protein paaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D DDD_1359 flavodoxin reductase(ferredoxin-NADPH reductase) K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D DDD_2169 paaE; phenylacetic acid degradation oxidoreductase / ferredoxin-NADPH reductase K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D DDD_2180 enoyl-CoA hydratase/isomerase family K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D DDD_2191 paaN; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase, phenylacetic acid degradation protein paaN K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D DDD_2182 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DDD_2587 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_0607 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DDD_0906 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D DDD_3032 cpeB; peroxidase/catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D DDD_2253 gatA; putative glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DDD_0808 alpha/beta hydrolase superfamily K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D DDD_3546 putative HMGL-like family protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:ndo00380]
D DDD_0908 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D DDD_0244 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D DDD_1882 putative kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D DDD_1885 kynureninase (L-kynurenine hydrolase) K01556 KYNU; kynureninase [EC:3.7.1.3]
D DDD_1705 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D DDD_2058 putative 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D DDD_2048 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D DDD_1880 2-aminomuconate deaminase K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D DDD_0453 bfmBB; lipoamide acyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_1716 sucB; 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_2198 pdhC; putative dihydrolipoamide acyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_0893 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_1992 amidohydrolase/nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D DDD_2253 gatA; putative glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DDD_3032 cpeB; peroxidase/catalase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ndo00400]
D DDD_2868 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DDD_2151 aroQ; 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DDD_2399 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DDD_1911 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DDD_3062 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DDD_0593 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DDD_0595 pabA; anthranilate/para-aminobenzoate synthetase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DDD_0596 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DDD_0598 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DDD_0597 trpC; indole-3-glycerol phosphate synthase, IGPS K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DDD_0600 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DDD_0599 trpB; tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DDD_1905 putative phospho-2-dehydro-3-deoxyheptonate aldolase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D DDD_1904 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DDD_1902 putative prefrenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_0607 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DDD_0620 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ndo00410]
D DDD_1216 panD; aspartate-1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_1215 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DDD_0071 acyl-CoA oxidase domain-containing protein K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 00430 Taurine and hypotaurine metabolism [PATH:ndo00430]
D DDD_2872 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DDD_2737 putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DDD_0754 gdhA1; NAD dependent Glu/Leu/Phe/Val dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D DDD_0136 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DDD_0137 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
D DDD_3041 metal-dependent hydrolase, beta-lactamase family K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ndo00450]
D DDD_0134 Cys/Met metabolism PLP-dependent enzyme K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DDD_1129 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DDD_1817 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DDD_1818 5-methyltetrahydrofolate:homocysteine methyltransferase-cobalamin binding domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DDD_1693 Cys/Met metabolism PLP-dependent enzyme K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D DDD_1317 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D DDD_0011 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DDD_1814 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DDD_2233 thioredoxin reductase carring response regulator receiver domain protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DDD_2265 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D DDD_2264 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DDD_1757 metG; methionine--tRNA ligase, metS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ndo00460]
D DDD_2367 periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DDD_1992 amidohydrolase/nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D DDD_1928 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DDD_1523 L-asparaginase I K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DDD_3458 ybiK; peptidase T2, asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DDD_2333 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ndo00470]
D DDD_1332 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DDD_0561 ddl; D-alanine, D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DDD_1262 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DDD_0800 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DDD_2580 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DDD_2865 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:ndo00480]
D DDD_2512 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D DDD_2513 allophanate hydrolase subunit 1 K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D DDD_2514 allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D DDD_3067 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DDD_0269 peptidase family M1 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DDD_3339 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D DDD_0915 dihydrolipoamide dehydrogenase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D DDD_0677 regulatory protein K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D DDD_0127 isocitrate dehydrogenase, NADP-dependent, monomeric-type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DDD_3486 leuB-2; isocitrate dehydrogenase (NADP) (Oxalosuccinatedecarboxylase) (Idh) (Nadp(+)-specific icdh) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ndo00511]
D DDD_0332 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D DDD_3609 beta-acetylhexosaminidase/precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D DDD_3611 beta-mannosidase/precursor (Mannase) K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D DDD_1879 asparaginase K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
D DDD_2363 glycosyl hydrolase, family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis [PATH:ndo00540]
D DDD_2880 lpxA; acyl-(Acyl-carrier-protein)--udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DDD_2879 UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D DDD_3220 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DDD_2878 lpxD; UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DDD_2882 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DDD_1644 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DDD_2034 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DDD_0587 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DDD_2305 sugar phosphate isomerase, KpsF/GutQ family, involved in capsule expression K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DDD_0308 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DDD_3382 kdsC; putative low specificity phosphatase (HAD superfamily) K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DDD_2621 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DDD_3545 kdsB1; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DDD_1171 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DDD_3008 putative acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DDD_2920 outer membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D DDD_0382 putative ADP-heptose:LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DDD_1449 O-Antigen Polymerase family K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ndo00541]
D DDD_1940 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DDD_3558 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DDD_1545 glucose-1-phosphate nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DDD_3561 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DDD_1366 DTDP-glucose 4,6-dehydratase (NAD-dependent epimerase) K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DDD_3562 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DDD_1441 rmlC; DTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DDD_1442 rfbD; DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DDD_0901 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DDD_2756 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D DDD_3007 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D DDD_3579 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D DDD_1444 GDP-D-mannose dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DDD_1445 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D DDD_3556 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D DDD_2286 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DDD_3543 fnlA; FnlA protein involved in UDP-L-FucpNAc biosynthesis (A nucleotide sugar for antigen-O biosynthesis) K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D DDD_3541 fnlB; FnlB protein involved in UDP-L-FucpNAc biosynthesis (A nucleotide sugar for antigen-O bisynthesis) K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D DDD_3540 fnlC; UDP-N-acetylglucosamine 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D DDD_3559 UDP-glucose/GDP-mannose dehydrogenase family protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D DDD_1172 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D DDD_3560 wbpP; UDP-glucose 4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:ndo00550]
D DDD_2904 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DDD_0581 UDP-N-acetylmuramate reductase/dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DDD_0797 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DDD_0800 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DDD_0802 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DDD_0561 ddl; D-alanine, D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DDD_2010 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DDD_1625 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DDD_1606 undecaprenol kinase, bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DDD_0074 putative transmembrane PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DDD_1976 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DDD_0801 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DDD_0798 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DDD_1253 mrcA; membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DDD_1284 pbpC; penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DDD_1980 mrdA; cell division protein FtsI/penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DDD_0803 ftsI; putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:ndo00552]
D DDD_1606 undecaprenol kinase, bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DDD_0074 putative transmembrane PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DDD_1976 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ndo00543]
D DDD_1454 glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D DDD_1452 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D DDD_2295 alginate O-acetylation protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D DDD_1527 alginate O-acetylation protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D DDD_0927 putative glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ndo00730]
D DDD_0361 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DDD_0860 FAD dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D DDD_1776 dxs; deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DDD_3193 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DDD_1310 thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D DDD_1906 engC; GTPase, DUF258 family K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DDD_2021 adk; putative adenylate kinase/hypoxanthine phosphoribosyltransferase fusion protein K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ndo00740]
D DDD_3521 ribA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DDD_3614 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DDD_2443 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DDD_1231 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DDD_0998 ribF; FAD synthase and riboflavin biosynthesis protein K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DDD_3093 putative ADP-ribose pyrophosphatase protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:ndo00750]
D DDD_2606 pdxH; pyridoxamine-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D DDD_3617 pyridoxamine 5'-phosphate oxidase-related protein K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D DDD_3370 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DDD_1621 pdxJ; pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D DDD_3293 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ndo00760]
D DDD_3229 quinolinate phosphoribosyl transferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D DDD_1897 punA; purine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D DDD_3603 putative phosphoesterase, 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D DDD_2032 surE; acid phosphatase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DDD_1660 nadD; nicotinate mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DDD_0816 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D DDD_0647 nadV; nicotinamide phosphoribosyl transferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D DDD_2435 npdA; NAD-dependent deacetylase, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D DDD_1623 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D DDD_3304 NAD-dependent aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DDD_2975 aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ndo00770]
D DDD_2890 3-methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase) K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DDD_1215 panC; pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DDD_2000 putative transcriptional regulator, Bvg accessory factor (Baf) family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DDD_3596 DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DDD_0562 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DDD_3588 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DDD_0145 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D DDD_1516 putative phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D DDD_3006 putative acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D DDD_2842 ilvE; putative 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_3342 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_1216 panD; aspartate-1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ndo00780]
D DDD_3150 putative oxidoreductase-dehydrogenase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DDD_1273 fabF; 3-oxoacyl-(Acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DDD_1197 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DDD_2056 short-chain dehydrogenases/reductases family (SDR) protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_2885 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_2710 putative dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_3153 fabZ; putative acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DDD_3593 fabI; enoylase-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DDD_1202 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DDD_1199 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DDD_1200 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DDD_1196 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D DDD_0568 putative biotin-(Acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ndo00785]
D DDD_2221 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D DDD_0584 lipA; lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_2015 pdhA; pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase E1 component K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D DDD_1031 pdhB; pyruvate 2-oxoglutarate dehydrogenase beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D DDD_2016 dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DDD_1715 kgd; 2-oxoglutarate dehydrogenase, dehydrogenase (E1) component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DDD_0453 bfmBB; lipoamide acyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_1716 sucB; 2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_2198 pdhC; putative dihydrolipoamide acyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DDD_2200 putative pyruvate/2-oxoglutarate dehydrogenase, El component: transketolase K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DDD_3159 oxoisovalerate dehydrogenase alpha and beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D DDD_2472 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DDD_3461 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DDD_1074 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ndo00790]
D DDD_2103 GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DDD_3057 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DDD_1412 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D DDD_0458 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DDD_1723 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DDD_1932 folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DDD_3521 ribA; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DDD_3566 anthranilate/para-aminobenzoate synthase K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D DDD_1240 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DDD_2087 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DDD_3350 pcbD; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D DDD_0620 phhA; phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D DDD_0425 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
C 00670 One carbon pool by folate [PATH:ndo00670]
D DDD_1723 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DDD_0299 folD; 5, 10-methylene-tetrahydrofolate dehydrogenase/Methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DDD_2333 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DDD_1271 purN; phosphoribosylglycinamide formyltransferase, PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DDD_1984 purH; phosphoribosylaminoimidazole carboxy formyl formyltransferase, bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DDD_2845 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DDD_3535 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DDD_3461 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DDD_1817 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DDD_1818 5-methyltetrahydrofolate:homocysteine methyltransferase-cobalamin binding domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DDD_1038 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DDD_1819 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DDD_1122 ygfA; 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ndo00860]
D DDD_1419 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DDD_1707 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D DDD_2213 hemL; glutamate-1-semialdehyde 2,1-aminotransferase, GSA-AT K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DDD_1192 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DDD_1706 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DDD_1063 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D DDD_1655 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D DDD_1653 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D DDD_0205 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D DDD_2131 membrane protein, UPF0093 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D DDD_1136 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D DDD_1602 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DDD_2670 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DDD_0055 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DDD_0258 magnesium-chelatase subunit chlI K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ndo00130]
D DDD_1850 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DDD_3389 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D DDD_3388 menD; putative menaquinone biosynthesis protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D DDD_0005 muconate cycloisomerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D DDD_0003 menE; O-succinylbenzoic acid-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D DDD_3466 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D DDD_3390 thioesterase superfamily protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D DDD_3511 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D DDD_0997 vitamin K-dependent gamma-glutamyl carboxylase K10106 GGCX; vitamin K-dependent gamma-carboxylase [EC:4.1.1.90]
D DDD_0906 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ndo00900]
D DDD_1776 dxs; deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DDD_2040 hmgA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D DDD_1964 protein containing mevalonate and galactokinase signatures K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D DDD_1963 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D DDD_2086 idi; isopentenyldiphosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D DDD_1788 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DDD_1946 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DDD_1625 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DDD_3208 transmembrane metalloprotease M48, Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:ndo00906]
D DDD_2396 crtB; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D DDD_2397 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D DDD_2392 crtY; putative lycopene cyclase K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D DDD_2395 crtZ; gamma-carotene hydroxylase K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
D DDD_2394 gamma-carotene desaturase K10210 crtP; diapolycopene oxygenase [EC:1.14.99.44]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:ndo00907]
D DDD_2164 mvaB; hydroxymethylglutaryl-CoA lyase, HMGL-like family K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DDD_2657 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DDD_0219 transketolase, N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DDD_0220 transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ndo00523]
D DDD_1545 glucose-1-phosphate nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DDD_3561 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DDD_1366 DTDP-glucose 4,6-dehydratase (NAD-dependent epimerase) K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DDD_3562 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DDD_1441 rmlC; DTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DDD_1442 rfbD; DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D DDD_3389 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D DDD_1366 DTDP-glucose 4,6-dehydratase (NAD-dependent epimerase) K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DDD_3562 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ndo00946]
D DDD_2367 periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:ndo00311]
D DDD_0348 cephalosporin-C deacetylase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
D DDD_0148 Penicillin acylase II precursor K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DDD_1506 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ndo00261]
D DDD_2265 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D DDD_2264 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DDD_3258 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DDD_1800 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DDD_3291 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D DDD_1330 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DDD_3599 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DDD_2855 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ndo00521]
D DDD_3247 phosphomannomutase/phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D DDD_1545 glucose-1-phosphate nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DDD_3561 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DDD_1366 DTDP-glucose 4,6-dehydratase (NAD-dependent epimerase) K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DDD_3562 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DDD_1441 rmlC; DTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DDD_1442 rfbD; DTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:ndo00525]
D DDD_1545 glucose-1-phosphate nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DDD_3561 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DDD_1366 DTDP-glucose 4,6-dehydratase (NAD-dependent epimerase) K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DDD_3562 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ndo00401]
D DDD_1904 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_0607 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D DDD_0593 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DDD_0595 pabA; anthranilate/para-aminobenzoate synthetase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D DDD_1722 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DDD_2056 short-chain dehydrogenases/reductases family (SDR) protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_2885 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_2710 putative dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_3593 fabI; enoylase-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D DDD_1272 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DDD_3149 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ndo00999]
D DDD_1811 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DDD_2367 periplasmic beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ndo00362]
D DDD_2657 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DDD_2186 acetyl-CoA acyltransferase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D DDD_3546 putative HMGL-like family protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D DDD_2048 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D DDD_2658 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DDD_0893 acyl-CoA dehydrogenase-like protein K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DDD_2182 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DDD_2587 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:ndo00627]
D DDD_2253 gatA; putative glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DDD_1992 amidohydrolase/nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00364 Fluorobenzoate degradation [PATH:ndo00364]
D DDD_3336 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ndo00625]
D DDD_3297 zinc-type alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DDD_2916 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DDD_3117 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ndo00361]
D DDD_3336 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DDD_3117 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:ndo00623]
D DDD_3336 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:ndo00622]
D DDD_2048 aldehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D DDD_3546 putative HMGL-like family protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation [PATH:ndo00633]
D DDD_0618 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D DDD_2657 fadA; acetyl-CoA acyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ndo00643]
D DDD_0904 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D DDD_2334 fumarylacetoacetate (FAA) hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D DDD_2253 gatA; putative glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DDD_1992 amidohydrolase/nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:ndo00930]
D DDD_1421 alkane-1-monooxygenase K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D DDD_2147 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D DDD_3546 putative HMGL-like family protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation [PATH:ndo00626]
D DDD_3297 zinc-type alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ndo03020]
D DDD_2078 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DDD_2079 rpoC; DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DDD_0516 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ndo03010]
D DDD_3313 rpsA; 30S ribosomal protein K02945 RP-S1; small subunit ribosomal protein S1
D DDD_1048 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DDD_0536 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DDD_0517 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DDD_0525 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DDD_2996 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DDD_0546 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DDD_0528 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DDD_1047 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DDD_0544 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DDD_0518 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DDD_0547 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DDD_0519 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DDD_0529 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DDD_1894 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DDD_0890 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DDD_0533 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DDD_2997 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DDD_0538 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DDD_2108 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DDD_2069 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DDD_2075 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DDD_0539 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DDD_0542 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DDD_0541 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DDD_0530 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DDD_0527 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DDD_2077 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DDD_2998 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DDD_2076 rplJ; RplJ, ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DDD_2074 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DDD_1046 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DDD_0532 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DDD_0523 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DDD_0535 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DDD_0515 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DDD_0526 rplR; putative 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DDD_0126 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DDD_0228 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DDD_1611 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DDD_0537 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DDD_0540 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DDD_0531 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DDD_1000 ctc; ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D DDD_1612 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DDD_2249 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DDD_0534 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DDD_0524 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DDD_3244 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DDD_1228 rpmF; 50S ribosomal protein L32 (Ribosomal protein I) K02911 RP-L32; large subunit ribosomal protein L32
D DDD_2250 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DDD_3273 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D DDD_0229 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DDD_0520 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DDD_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DDD_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DDD_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DDD_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DDD_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DDD_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ndo00970]
D DDD_t0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DDD_t0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DDD_t0036 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DDD_t0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DDD_t0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DDD_t0042 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DDD_t0012 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DDD_t0021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DDD_t0006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DDD_t0013 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DDD_t0016 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DDD_t0023 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DDD_t0034 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DDD_t0019 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DDD_t0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DDD_t0031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DDD_t0001 tRNA-His K14226 tRNA-His; tRNA His
D DDD_t0015 tRNA-His K14226 tRNA-His; tRNA His
D DDD_t0024 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DDD_t0035 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DDD_t0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DDD_t0014 tRNA-Met K14230 tRNA-Met; tRNA Met
D DDD_t0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D DDD_t0005 tRNA-Met K14230 tRNA-Met; tRNA Met
D DDD_t0028 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DDD_t0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DDD_t0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DDD_t0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DDD_t0026 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DDD_t0032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DDD_t0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DDD_t0033 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DDD_t0030 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DDD_t0027 tRNA-Val K14237 tRNA-Val; tRNA Val
D DDD_1419 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DDD_1413 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DDD_0094 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DDD_1190 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DDD_1017 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DDD_1673 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DDD_0231 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DDD_0996 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DDD_2102 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DDD_1757 metG; methionine--tRNA ligase, metS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DDD_2845 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DDD_3535 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DDD_0576 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DDD_1603 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DDD_1116 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DDD_2218 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DDD_2116 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DDD_2107 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DDD_2935 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DDD_1701 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DDD_2436 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DDD_1057 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DDD_1493 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ndo03060]
D DDD_0522 secY; preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D DDD_0872 SecG domain containing protein K03075 secG; preprotein translocase subunit SecG
D DDD_0420 secD; SecD/SecF/SecDF export membrane protein K12257 secDF; SecD/SecF fusion protein
D DDD_0404 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DDD_2345 oxaA; 60 Kd inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DDD_0057 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DDD_0298 ffh; signal recognition protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DDD_2252 ftsY; cell division protein, signal recognition particle (Docking protein) K03110 ftsY; fused signal recognition particle receptor
D DDD_1975 Sec-independent protein translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D DDD_1436 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D DDD_2304 putative sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D DDD_2854 lepB; putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DDD_1119 lspA; signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ndo04122]
D DDD_0361 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DDD_0030 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ndo03018]
D DDD_0513 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DDD_1892 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DDD_2482 rhlE; ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DDD_2122 ATP-dependent RNA helicase, DEAD/DEAH box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DDD_0234 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DDD_1408 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DDD_2567 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DDD_3046 dbpA; ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DDD_2846 ATP-dependent dead/H DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_1639 recQ1; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_2306 recQ2; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_0469 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DDD_2145 HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DDD_3413 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DDD_2732 dnaK; chaperone protein dnaK (Heat shock protein HSP70) K04043 dnaK; molecular chaperone DnaK
D DDD_0875 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DDD_3281 ppk2; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DDD_2608 ppk1; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DDD_0390 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ndo03030]
D DDD_2352 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_2519 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_3024 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_1809 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DDD_2611 dnaX; DNA polymerase III gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DDD_1427 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DDD_3510 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DDD_2989 dnaN; DNA-directed DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DDD_0213 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DDD_0818 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DDD_1565 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_0255 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_1270 rnhA; ribonuclease H, RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DDD_2241 rnhB; ribonuclease K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DDD_1733 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DDD_3608 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ndo03410]
D DDD_3038 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DDD_2712 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DDD_1564 mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DDD_2484 3mgh; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D DDD_0139 mutM; DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DDD_1248 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DDD_1524 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DDD_1733 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DDD_1643 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DDD_3608 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ndo03420]
D DDD_0914 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DDD_3489 uvrA2; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DDD_0283 uvrA1; excinuclease ATPase subunit A K03701 uvrA; excinuclease ABC subunit A
D DDD_3345 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D DDD_0902 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D DDD_0263 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DDD_1733 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DDD_3608 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ndo03430]
D DDD_1256 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DDD_3234 DNA mismatch repair protein, MutS family K07456 mutS2; DNA mismatch repair protein MutS2
D DDD_2786 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D DDD_0263 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DDD_1643 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DDD_1565 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_0255 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_1809 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DDD_2989 dnaN; DNA-directed DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DDD_2611 dnaX; DNA polymerase III gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DDD_3510 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DDD_1427 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DDD_2352 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_2519 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_3024 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_3608 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ndo03440]
D DDD_1643 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DDD_1565 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_0255 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_2446 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D DDD_0919 recO; putative DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D DDD_0456 recR; recombination DNA repair protein K06187 recR; recombination protein RecR
D DDD_1488 recA; protein recA K03553 recA; recombination protein RecA
D DDD_1733 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DDD_1076 ruvA; holliday junction DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D DDD_1082 ruvB; holliday junction specific DNA helicase, subunit ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DDD_0925 ruvC; crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DDD_0259 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DDD_1809 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DDD_2989 dnaN; DNA-directed DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DDD_2611 dnaX; DNA polymerase III gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DDD_3510 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DDD_1427 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DDD_2352 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_2519 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_3024 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_2994 priA; primosomal protein N' (Replication factor Y)-superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ndo03250]
D DDD_0054 ppiC; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ndo02010]
D DDD_3078 Mce (Mammalian cell entry) family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DDD_0274 putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DDD_0275 ABC transporter, ATP binding component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DDD_1663 ABC-type metal ion transport system, periplasmic component/surface adhesin K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D DDD_1665 metal ABC transporter, ABC-3 family K11708 troC; manganese/zinc/iron transport system permease protein
D DDD_1666 metal ABC transporter, ABC-3 family K11709 troD; manganese/zinc/iron transport system permease protein
D DDD_1664 zinc ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D DDD_2269 ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DDD_2270 polysialic K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DDD_2027 putative ABC transporter, permease component K09808 lolC_E; lipoprotein-releasing system permease protein
D DDD_1481 putative lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D DDD_3053 lolD; lipoprotein releasing system ATP-binding ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DDD_3520 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein
D DDD_0216 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D DDD_0076 ABC transporter, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DDD_1604 ftsX; cell division permease K09811 ftsX; cell division transport system permease protein
D DDD_0445 cell division ABC transporter, ATP binding component K09812 ftsE; cell division transport system ATP-binding protein
D DDD_3248 ABC transporter K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DDD_0409 ABC-type multidrug/protein/lipid transporter ATP-binding and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D DDD_0463 multidrug resistance ABC transporter ATP-binding and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D DDD_1466 bacteriocin ABC transporter, ATP-binding/permease protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:ndo03070]
D DDD_1590 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D DDD_1786 outer membrane efflux protein K12340 tolC; outer membrane protein
D DDD_0420 secD; SecD/SecF/SecDF export membrane protein K12257 secDF; SecD/SecF fusion protein
D DDD_0872 SecG domain containing protein K03075 secG; preprotein translocase subunit SecG
D DDD_0522 secY; preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D DDD_0404 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DDD_2345 oxaA; 60 Kd inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DDD_0057 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DDD_2252 ftsY; cell division protein, signal recognition particle (Docking protein) K03110 ftsY; fused signal recognition particle receptor
D DDD_0298 ffh; signal recognition protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DDD_1975 Sec-independent protein translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D DDD_1436 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D DDD_2304 putative sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ndo02020]
D DDD_1053 sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DDD_3587 rprX; sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DDD_1054 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DDD_0479 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DDD_2579 putative periplasmic trypsin-like serine protease, HtrA/DegQ/DegS family K04771 degP; serine protease Do [EC:3.4.21.107]
D DDD_0736 putative cation efflux system transmembrane protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D DDD_0725 putative copper/silver resistance-related transport membrane protein K07787 cusA; copper/silver efflux system protein
D DDD_2670 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DDD_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DDD_2257 vanW; putative vancomycin B-type resistance protein K18346 vanW; vancomycin resistance protein VanW
D DDD_1634 Sensor protein K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D DDD_1874 two component transcriptional regulator, LuxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DDD_0823 putative fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DDD_3250 two component regulator three Y motif family K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D DDD_2561 putative two-component sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D DDD_2775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DDD_0749 two component, sigma54 specific, transcriptional regulator, Fis family protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DDD_1016 rpoN; RNA polymerase, sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DDD_0196 ccoN; putative cytochrome oxidase subunit (Cbb3-type) K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D DDD_0197 hypothetical protein K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D DDD_0198 ccoP; cytochrome c oxidase (Chain III) K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D DDD_1590 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D DDD_1786 outer membrane efflux protein K12340 tolC; outer membrane protein
D DDD_3530 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D DDD_2266 putative EPS related membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D DDD_0002 protein-tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D DDD_2267 putative tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DDD_3529 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DDD_2286 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ndo02024]
D DDD_0593 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DDD_0595 pabA; anthranilate/para-aminobenzoate synthetase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DDD_2081 putative aggregation factor core protein MAFp3, isoform C K20276 bapA; large repetitive protein
D DDD_2104 uncharacterized protein K20276 bapA; large repetitive protein
D DDD_3022 PKD domain-containing protein K20276 bapA; large repetitive protein
D DDD_1484 putative hemagluttinin family protein K20276 bapA; large repetitive protein
D DDD_3138 putative hemagglutinin/hemolysin-related protein K20276 bapA; large repetitive protein
D DDD_3494 CHU large protein K20276 bapA; large repetitive protein
D DDD_3592 putative hemagluttinin family protein K20276 bapA; large repetitive protein
D DDD_3025 fadD; long-chain-fatty-acid--CoA ligase (Synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DDD_3614 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DDD_1466 bacteriocin ABC transporter, ATP-binding/permease protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D DDD_2315 putative ABC peptide transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DDD_0051 dppB; putative binding-protein-dependent transport system inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DDD_2030 dppC; oligopeptide transport permeasee K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DDD_1255 yliA; ABC transporter ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DDD_2345 oxaA; 60 Kd inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DDD_0420 secD; SecD/SecF/SecDF export membrane protein K12257 secDF; SecD/SecF fusion protein
D DDD_0872 SecG domain containing protein K03075 secG; preprotein translocase subunit SecG
D DDD_0522 secY; preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D DDD_0404 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DDD_0057 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DDD_2252 ftsY; cell division protein, signal recognition particle (Docking protein) K03110 ftsY; fused signal recognition particle receptor
D DDD_0298 ffh; signal recognition protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D DDD_3507 chemotaxis motB protein, OmpA family K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ndo02040]
D DDD_3507 chemotaxis motB protein, OmpA family K02557 motB; chemotaxis protein MotB
D DDD_3187 rpoD; DNA-directed RNA polymerase major sigma-43 factor (Sigma-A) K03086 rpoD; RNA polymerase primary sigma factor
D DDD_1016 rpoN; RNA polymerase, sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DDD_0513 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ndo04980]
D DDD_0055 cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DDD_0061 argK; ArgK protein K07588 MMAA; GTPase [EC:3.6.5.-]
D DDD_3355 mutA; putative methylmalonyl-CoA mutase small subunit (MCM-beta) K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DDD_3360 mutB; methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D DDD_1817 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DDD_1818 5-methyltetrahydrofolate:homocysteine methyltransferase-cobalamin binding domain protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ndo01501]
D DDD_3087 glycoside hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DDD_0122 peptidase M56, BlaR1 K02172 blaR1; bla regulator protein blaR1
D DDD_0965 putative peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D DDD_3471 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_0964 putative antibiotic resistance-related regulatory protein, Penicillinase repressor family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_0123 antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_1506 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D DDD_1590 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D DDD_1786 outer membrane efflux protein K12340 tolC; outer membrane protein
D DDD_1253 mrcA; membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DDD_1980 mrdA; cell division protein FtsI/penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DDD_0803 ftsI; putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ndo01502]
D DDD_0561 ddl; D-alanine, D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DDD_1332 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DDD_2010 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DDD_0801 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DDD_0798 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DDD_2257 vanW; putative vancomycin B-type resistance protein K18346 vanW; vancomycin resistance protein VanW
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ndo01503]
D DDD_3077 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DDD_2579 putative periplasmic trypsin-like serine protease, HtrA/DegQ/DegS family K04771 degP; serine protease Do [EC:3.4.21.107]
D DDD_0054 ppiC; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DDD_1590 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D DDD_1786 outer membrane efflux protein K12340 tolC; outer membrane protein
D DDD_2880 lpxA; acyl-(Acyl-carrier-protein)--udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ndo01000]
C 01001 Protein kinases [BR:ndo01001]
D DDD_3120 WD-40 repeat protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DDD_0560 putative transmembrane PASTA-domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D DDD_2267 putative tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DDD_3529 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DDD_1053 sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DDD_3587 rprX; sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DDD_3250 two component regulator three Y motif family K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D DDD_2561 putative two-component sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D DDD_2650 sensor protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D DDD_1634 Sensor protein K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D DDD_3330 putative two-component sensor histidine kinase transcriptional regulator K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D DDD_0943 histidine kinase family K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D DDD_1111 sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ndo01009]
D DDD_1515 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DDD_3413 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DDD_2496 htpG; chaperone/heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:ndo01002]
D DDD_1119 lspA; signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DDD_2338 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DDD_1466 bacteriocin ABC transporter, ATP-binding/permease protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D DDD_2035 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D DDD_2602 putative cell wall-associated hydrolase (Invasion-associated proteins), NlpC/P60 family K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D DDD_1104 glutamine phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DDD_1212 glmS; glucosamine 6-phosphate synthetase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DDD_0592 asnB; asparagine synthetase B, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DDD_2988 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D DDD_0004 abortive infection protein K07052 K07052; CAAX protease family protein
D DDD_0067 aminopeptidase, peptidase M1 family K01254 LTA4H; leukotriene-A4 hydrolase [EC:3.3.2.6]
D DDD_0269 peptidase family M1 aminopeptidase K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DDD_2476 peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D DDD_1244 pepO; endopeptidase M13 family K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D DDD_0207 putative carboxypeptidase K05996 cpt; carboxypeptidase T [EC:3.4.17.18]
D DDD_0472 putative peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D DDD_1608 putative peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D DDD_1609 insulin-like peptidase, M16 family K07263 pqqL; zinc protease [EC:3.4.24.-]
D DDD_0400 aminotripeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D DDD_3339 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D DDD_2055 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DDD_1510 pepP; proline aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DDD_0570 ftsH; AAA-metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DDD_3208 transmembrane metalloprotease M48, Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DDD_3018 dipeptidyl-peptidase III K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D DDD_1292 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DDD_0122 peptidase M56, BlaR1 K02172 blaR1; bla regulator protein blaR1
D DDD_0965 putative peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D DDD_3333 phenylalanyl-tRNA synthetase, alpha subunit K09933 mtfA; MtfA peptidase
D DDD_0112 DUF980 domain containing protein K09933 mtfA; MtfA peptidase
D DDD_2579 putative periplasmic trypsin-like serine protease, HtrA/DegQ/DegS family K04771 degP; serine protease Do [EC:3.4.21.107]
D DDD_1941 putative lysyl endopeptidase K01337 E3.4.21.50; lysyl endopeptidase [EC:3.4.21.50]
D DDD_1234 putative subtilisin-like serine protease, subtilase family K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D DDD_0029 putative serine protease, subtilase family K17734 aprX; serine protease AprX [EC:3.4.21.-]
D DDD_2990 putative Subtilisin-like serine protease K17734 aprX; serine protease AprX [EC:3.4.21.-]
D DDD_1328 prolyl endopeptidase serine protease K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D DDD_2039 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D DDD_3498 endopeptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D DDD_0432 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DDD_1615 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DDD_3037 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DDD_2854 lepB; putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DDD_2031 putative periplasmic tail-specific carboxyl-terminal protease, Peptidase family S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DDD_1391 periplasmic carboxyl-terminal processing protease (Precursor), S41A family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DDD_1917 carboxyl-terminal protease, Peptidase S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DDD_3475 peptidase S41 family K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DDD_0312 peptidase S41 K08676 tri; tricorn protease [EC:3.4.21.-]
D DDD_2547 putative peptidase/protease family protein K08676 tri; tricorn protease [EC:3.4.21.-]
D DDD_0148 Penicillin acylase II precursor K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DDD_1969 putative peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D DDD_2120 peptidase S51, dipeptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D DDD_2595 cphB; cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D DDD_2789 putative transmembrane rhomboid family protein K07059 K07059; rhomboid family protein
D DDD_1753 putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D DDD_1523 L-asparaginase I K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DDD_3458 ybiK; peptidase T2, asparaginase 2 K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DDD_1378 outer membrane protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:ndo01003]
D DDD_2755 dolichol-phosphate mannosyltransferase, two-component system response regulatory protein-glycosyl transferase, group 2 family protein K00729 ALG5; dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117]
D DDD_1061 dolichol-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D DDD_0790 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DDD_1214 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D DDD_1284 pbpC; penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DDD_1253 mrcA; membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DDD_1953 PTPS_related domain containing protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
D DDD_0927 putative glycosyl transferase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ndo01005]
D DDD_2880 lpxA; acyl-(Acyl-carrier-protein)--udp-n-acetylglucosamine o-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DDD_2034 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DDD_2879 UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D DDD_3220 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DDD_2878 lpxD; UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DDD_2882 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DDD_1644 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DDD_0587 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DDD_3008 putative acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DDD_2920 outer membrane protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D DDD_1171 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DDD_0308 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DDD_2621 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DDD_3545 kdsB1; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DDD_3382 kdsC; putative low specificity phosphatase (HAD superfamily) K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DDD_2305 sugar phosphate isomerase, KpsF/GutQ family, involved in capsule expression K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DDD_0382 putative ADP-heptose:LPS heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DDD_1449 O-Antigen Polymerase family K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D DDD_3538 putative UDP-galactose 4-epimerase K19997 gnu; GlcNAc-P-P-Und epimerase [EC:5.1.3.26]
D DDD_3536 capsular polysaccharide synthesis protein K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ndo01011]
D DDD_2904 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DDD_0581 UDP-N-acetylmuramate reductase/dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DDD_0797 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DDD_0800 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DDD_0802 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DDD_0561 ddl; D-alanine, D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DDD_1332 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DDD_1262 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DDD_1753 putative carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D DDD_0801 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DDD_0798 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DDD_1606 undecaprenol kinase, bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DDD_0074 putative transmembrane PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DDD_1976 putative membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DDD_1253 mrcA; membrane carboxypeptidase/penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DDD_1284 pbpC; penicillin-binding protein K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DDD_1980 mrdA; cell division protein FtsI/penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DDD_0803 ftsI; putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DDD_2035 NlpC/P60 family protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D DDD_1430 putative lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D DDD_2624 membrane-bound lytic murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D DDD_2582 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DDD_3077 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ndo01004]
D DDD_1722 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DDD_2461 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DDD_1227 fabH1; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DDD_2095 fabH2; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DDD_3150 putative oxidoreductase-dehydrogenase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D DDD_1273 fabF; 3-oxoacyl-(Acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DDD_1197 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DDD_2056 short-chain dehydrogenases/reductases family (SDR) protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_2885 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_2710 putative dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DDD_3153 fabZ; putative acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DDD_2879 UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D DDD_3593 fabI; enoylase-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DDD_0028 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D DDD_3154 putative dehydrogenase/reductase K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D DDD_3481 GDSL-like lipase/acylhydrolase domain protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DDD_2928 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DDD_1638 acyl-[acyl-carrier-protein] desaturase K03921 FAB2; acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]
D DDD_0481 acsA; acyl-coenzyme A synthetases/AMP-(Fatty) acid ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DDD_0480 prpE; acyl-coenzyme A synthetase, AMP-(Fatty) acid ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D DDD_3025 fadD; long-chain-fatty-acid--CoA ligase (Synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DDD_1637 1-acyl-sn-glycerol-3-phosphate acetyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DDD_1492 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ndo01008]
D DDD_3155 bcsA; naringenin-chalcone synthase K16167 bpsA; alkylresorcinol/alkylpyrone synthase
C 01006 Prenyltransferases [BR:ndo01006]
D DDD_1788 polyprenyl synthetase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D DDD_1946 polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DDD_1625 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DDD_2396 crtB; phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D DDD_3585 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DDD_3511 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D DDD_1602 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ndo01007]
D DDD_1419 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DDD_1413 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DDD_1057 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DDD_1493 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DDD_2102 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DDD_2116 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DDD_1757 metG; methionine--tRNA ligase, metS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DDD_1116 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DDD_0576 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DDD_1603 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DDD_2218 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DDD_1190 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DDD_1017 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DDD_2935 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DDD_1673 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DDD_0996 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DDD_2107 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DDD_0231 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DDD_0094 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DDD_1701 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DDD_2436 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DDD_0580 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1856 aatA; aminotransferase class I/II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D DDD_1539 aminotransferase class I/II K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D DDD_1903 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D DDD_0607 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DDD_3496 aminocarboxylic acid CoA-ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DDD_1100 kbl; glycine C-acetyltransferase (2-amino-3-ketobutyrate CoA ligase) K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DDD_1202 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DDD_0371 oat; ornithine/acetylornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D DDD_3526 argD; aminotransferase class-III family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DDD_1199 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DDD_2213 hemL; glutamate-1-semialdehyde 2,1-aminotransferase, GSA-AT K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DDD_2842 ilvE; putative 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_3342 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DDD_3370 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DDD_1172 DegT/DnrJ/EryC1/StrS family aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D DDD_3556 DegT/DnrJ/EryC1/StrS family aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ndo00194]
D DDD_1210 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DDD_1211 atpB; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DDD_1342 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DDD_1344 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DDD_1346 atpD; ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DDD_1347 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DDD_1348 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DDD_1349 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DDD_0502 DUF1001 domain containing protein K05383 cpeT; CpeT protein
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ndo03000]
D DDD_3194 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_3301 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_1708 transcriptional regulator, AraC family K05372 ybtA; AraC family transcriptional regulator
D DDD_0642 transcriptional regulator, AraC family K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D DDD_3513 oxyR; redox-sensisitve transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D DDD_2085 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DDD_0984 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DDD_0356 gntR; transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DDD_1572 transcriptional regulator, TetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DDD_1306 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DDD_0482 transcriptional regulator, TetR family K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon
D DDD_2986 AsnC/Lrp family transcriptional regulator protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D DDD_2311 transcriptional regulator K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D DDD_2659 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DDD_2398 putative transcriptional regulator, MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D DDD_3404 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DDD_0740 putative transcription regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DDD_0778 transcriptional regulator, Crp family protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DDD_2937 cyclic nucleotide-binding protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DDD_1393 transcriptional regulator, arsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DDD_0679 transcriptional regulator K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D DDD_3439 transcriptional regulator, ArsR family protein K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D DDD_0008 putative PadR-like family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D DDD_2576 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D DDD_1661 putative Mn-or Fe-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D DDD_3471 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_0964 putative antibiotic resistance-related regulatory protein, Penicillinase repressor family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_0123 antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_0568 putative biotin-(Acetyl-CoA carboxylase) ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DDD_1207 HTH_3 family transcriptional regulator protein K07727 K07727; putative transcriptional regulator
D DDD_0279 XRE family transcriptional regulator K07729 K07729; putative transcriptional regulator
D DDD_0690 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D DDD_2857 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DDD_0167 NusG antitermination factor K05785 rfaH; transcriptional antiterminator RfaH
D DDD_0755 transcription elongation factor K06140 rnk; regulator of nucleoside diphosphate kinase
D DDD_2400 pyrimidine operon regulatory phosphoribosyl transferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DDD_3310 pyrR; phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DDD_2843 putative transcriptional regulator K07735 algH; putative transcriptional regulator
D DDD_1117 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D DDD_0806 mraZ; putative cell division protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ndo03021]
D DDD_0516 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DDD_2078 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DDD_2079 rpoC; DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DDD_3187 rpoD; DNA-directed RNA polymerase major sigma-43 factor (Sigma-A) K03086 rpoD; RNA polymerase primary sigma factor
D DDD_0497 DNA-directed RNA polymerase, sigma-70 region 2, ECF-type subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DDD_3320 putative RNA polymerase ECF-type sigma-70 region 2 domain protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DDD_1016 rpoN; RNA polymerase, sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DDD_1750 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D DDD_0406 nusB; putative antitermination protein K03625 nusB; transcription antitermination protein NusB
D DDD_2073 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D DDD_1117 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D DDD_1770 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D DDD_0898 GreA-like transcription elongation factor K04760 greB; transcription elongation factor GreB
D DDD_0469 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ndo03019]
D DDD_1562 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D DDD_1274 ribonuclease III (Rnase III), double-stranded RNA binding motif protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DDD_2145 HD superfamily hydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D DDD_1408 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DDD_2482 rhlE; ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DDD_2122 ATP-dependent RNA helicase, DEAD/DEAH box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DDD_0234 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DDD_2567 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DDD_3046 dbpA; ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DDD_2846 ATP-dependent dead/H DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_1639 recQ1; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_2306 recQ2; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_0513 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DDD_1892 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DDD_0469 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DDD_3413 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D DDD_2732 dnaK; chaperone protein dnaK (Heat shock protein HSP70) K04043 dnaK; molecular chaperone DnaK
D DDD_0875 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DDD_3281 ppk2; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DDD_2608 ppk1; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DDD_0390 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:ndo03011]
D DDD_3313 rpsA; 30S ribosomal protein K02945 RP-S1; small subunit ribosomal protein S1
D DDD_1048 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DDD_0536 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DDD_0517 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DDD_0525 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DDD_2996 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DDD_0546 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DDD_0528 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D DDD_1047 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D DDD_0544 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DDD_0518 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DDD_0547 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DDD_0519 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DDD_0529 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D DDD_1894 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DDD_0890 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DDD_0533 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DDD_2997 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DDD_0538 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DDD_2108 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DDD_2069 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DDD_2075 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DDD_0539 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DDD_0542 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DDD_0541 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DDD_0530 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D DDD_0527 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DDD_2998 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DDD_2076 rplJ; RplJ, ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D DDD_2074 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DDD_2077 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DDD_1046 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DDD_0532 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DDD_0523 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DDD_0535 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DDD_0515 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DDD_0526 rplR; putative 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DDD_0126 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DDD_0228 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DDD_1611 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DDD_0537 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DDD_0540 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DDD_0531 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DDD_1612 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DDD_2249 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DDD_0534 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DDD_0524 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DDD_3244 rpmE2; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DDD_1228 rpmF; 50S ribosomal protein L32 (Ribosomal protein I) K02911 RP-L32; large subunit ribosomal protein L32
D DDD_2250 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DDD_3273 hypothetical protein K02914 RP-L34; large subunit ribosomal protein L34
D DDD_0229 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DDD_0520 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DDD_1000 ctc; ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D DDD_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DDD_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DDD_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DDD_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DDD_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DDD_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ndo03009]
D DDD_1274 ribonuclease III (Rnase III), double-stranded RNA binding motif protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DDD_0495 era; GTP-binding protein K03595 era; GTPase
D DDD_2023 obgE; GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D DDD_1117 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D DDD_1750 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D DDD_0406 nusB; putative antitermination protein K03625 nusB; transcription antitermination protein NusB
D DDD_2073 nusG; transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D DDD_0993 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DDD_3295 tRNA and rRNA cytosine-C5-methylase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DDD_2613 putative methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DDD_2452 protein containing DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DDD_1857 gidB; glucose-inhibited methyltransferase division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DDD_0805 MraW family S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DDD_1525 uroporphyrin-III C/tetrapyrrole methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DDD_3023 tetrapyrrole methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DDD_0552 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DDD_1584 TRNA/rRNA methyltransferase, SpoU family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DDD_2121 putative SAM-dependent methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D DDD_3230 UPF0247 protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D DDD_3232 UPF0247 protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D DDD_2758 N6-adenine-specific DNA methylase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D DDD_1942 radical SAM domain protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DDD_0372 RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DDD_3251 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DDD_1960 ribosomal large subunit pseudouridine synthase F K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DDD_2918 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DDD_0559 rluD; pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DDD_2907 rluE; pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D DDD_0038 rluF; pseudouridine synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D DDD_1124 rimK; glutathione synthase/ribosomal protein S6 modification enzyme K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D DDD_0891 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D DDD_2259 MiaB family tRNA modifying enzyme K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D DDD_0048 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DDD_1562 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D DDD_0380 endonuclease involved in recombination repair K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DDD_2567 ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DDD_3046 dbpA; ATP-independent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D DDD_1906 engC; GTPase, DUF258 family K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DDD_1947 GTPase K03977 engA; GTPase
D DDD_1686 hflX; GTP-binding protein K03665 hflX; GTPase
D DDD_0389 SUA5/YciO/YrdC/YwlC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DDD_1401 sua5; Sua5/YciO/YrdC/YwlC translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DDD_3403 relA; GTP pyrophosphokinase, RelA/SpoT family K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DDD_1480 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D DDD_1749 DUF150 domain containing protein K09748 rimP; ribosome maturation factor RimP
D DDD_0569 protein containing DUF143 K09710 ybeB; ribosome-associated protein
D DDD_1423 protein belonging to UPF0054 K07042 ybeY; probable rRNA maturation factor
D DDD_2071 sigma-54 modulation protein-like ribosome-associated protein K05808 hpf; ribosome hibernation promoting factor
D DDD_0746 site-specific recombinase, phage integrase family/ribosomal subunit interface protein K05809 raiA; ribosome-associated inhibitor A
D DDD_3141 site-specific recombinase, phage integrase family/ribosomal subunit interface protein K05809 raiA; ribosome-associated inhibitor A
D DDD_2692 engD; ATP/GTP-binding protein K06942 ychF; ribosome-binding ATPase
D DDD_1229 riboflavin synthase subunit alpha K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ndo03016]
D DDD_3307 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D DDD_1419 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DDD_2107 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DDD_1116 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DDD_1603 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DDD_1757 metG; methionine--tRNA ligase, metS K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DDD_1413 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DDD_2116 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DDD_2218 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DDD_1190 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DDD_0094 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DDD_1017 asnC; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D DDD_1673 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DDD_0231 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DDD_0996 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DDD_2102 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DDD_0576 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DDD_2935 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DDD_1701 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DDD_2436 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DDD_1057 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DDD_1493 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DDD_1907 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DDD_1771 putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DDD_1052 tRNA (Guanine-7) methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D DDD_0465 truA1; pseudouridylate synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DDD_1827 truA2; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DDD_1325 truB; pseudouridine synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DDD_0361 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DDD_0389 SUA5/YciO/YrdC/YwlC domain protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DDD_1401 sua5; Sua5/YciO/YrdC/YwlC translation factor K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DDD_3585 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DDD_2556 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DDD_1424 gidA; glucose-inhibited division protein, GIDA (NAD/FAD-utilizing enzyme) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DDD_2261 CysQ, sulfite synthesis pathway protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D DDD_1389 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DDD_0651 RNA 2'-phosphotransferase K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-]
D DDD_0113 ABC transporter, ATP-binding component K06020 ettA; energy-dependent translational throttle protein EttA
D DDD_1772 cytosine/adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DDD_1482 TRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DDD_3287 dus; dihydrouridine synthase DuS K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DDD_0868 2-methylthioadenine synthetase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DDD_2676 2-methylthioadenine synthetase K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D DDD_0124 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DDD_3222 putative rRNA methylase (SpoU class) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DDD_0892 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D DDD_3207 spoU; tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D DDD_1848 RNA methyltransferase, SpoU family K03437 spoU; RNA methyltransferase, TrmH family
D DDD_3251 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D DDD_0030 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DDD_1311 sufA; scaffold protein for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D DDD_2671 miaE; tRNA (Ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D DDD_1912 queA; S-adenosylmethionine, tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DDD_1240 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DDD_2087 6-pyruvoyl-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DDD_0425 organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DDD_0217 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DDD_3565 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DDD_1588 putative glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DDD_2451 putative metal-dependent protease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DDD_2875 putative ATP/GTP-binding transmembrane protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DDD_1408 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DDD_1892 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DDD_3144 putative DNA binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:ndo03012]
D DDD_3349 putative translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1
D DDD_1751 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DDD_0230 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DDD_0858 ABC transporter, ATP binding component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DDD_2457 ABC transporter, ATP binding component K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DDD_1049 translation elongation factor Ts K02357 tsf; elongation factor Ts
D DDD_2072 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DDD_0545 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DDD_2763 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D DDD_1020 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D DDD_3612 putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DDD_0999 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DDD_0521 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DDD_2881 efp2; elongation factor P K02356 efp; elongation factor P
D DDD_3002 prfB; peptide chain release factor 2 (RF-2) K02836 prfB; peptide chain release factor 2
D DDD_2084 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D DDD_1522 putative peptidyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ndo03110]
D DDD_3028 clpB; ATP-dependent Clp protease K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DDD_2598 ATP-dependent Clp protease, ClpA/ClpB family chaperone K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D DDD_1614 clpX; ATP-dependent Clp protease, ATP-binding regulatory subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DDD_2496 htpG; chaperone/heat shock protein K04079 HSP90A; molecular chaperone HtpG
D DDD_2732 dnaK; chaperone protein dnaK (Heat shock protein HSP70) K04043 dnaK; molecular chaperone DnaK
D DDD_0875 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DDD_2324 dnaJ; DnaJ-class molecular chaperone K03686 dnaJ; molecular chaperone DnaJ
D DDD_1322 djlA; DnaJ-like protein DjlA K05801 djlA; DnaJ like chaperone protein
D DDD_2323 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE
D DDD_3223 heat shock related protein HSP20 K13993 HSP20; HSP20 family protein
D DDD_2402 putative ribosome-associated heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D DDD_0873 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D DDD_2579 putative periplasmic trypsin-like serine protease, HtrA/DegQ/DegS family K04771 degP; serine protease Do [EC:3.4.21.107]
D DDD_0570 ftsH; AAA-metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DDD_1349 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DDD_2215 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D DDD_1234 putative subtilisin-like serine protease, subtilase family K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D DDD_3609 beta-acetylhexosaminidase/precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D DDD_0054 ppiC; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DDD_1994 putative peptidyl-prolyl cis-trans isomerase, PpiC-type K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D DDD_2375 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D DDD_2377 surA; PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D DDD_0900 thioredoxin K03671 TXN; thioredoxin
D DDD_1738 putative thioredoxin K03671 TXN; thioredoxin
D DDD_0992 thiol-disulfide isomerase/thioredoxin K03671 TXN; thioredoxin
D DDD_2993 putative thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:ndo04131]
D DDD_3275 ndk; nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DDD_1469 putative secreted protein K07192 FLOT; flotillin
D DDD_2575 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_3412 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_0585 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_3316 putative phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DDD_1276 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DDD_2496 htpG; chaperone/heat shock protein K04079 HSP90A; molecular chaperone HtpG
D DDD_3031 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ndo03051]
D DDD_2496 htpG; chaperone/heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ndo03032]
D DDD_1270 rnhA; ribonuclease H, RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DDD_3194 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_3301 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_2844 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D DDD_1563 histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DDD_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DDD_0213 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DDD_0818 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DDD_1565 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_0255 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_1809 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DDD_2989 dnaN; DNA-directed DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DDD_3510 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DDD_1427 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DDD_2352 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_2519 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_3024 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_2611 dnaX; DNA polymerase III gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DDD_2241 rnhB; ribonuclease K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DDD_1733 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DDD_3608 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DDD_2599 gyrA; DNA gyrase (Type IIA topoisomerase), subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DDD_0423 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DDD_2981 parC; topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DDD_2979 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DDD_0866 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DDD_2244 putative DNA topoisomerase I, eukaryotic-like protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ndo03036]
D DDD_3194 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_3301 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_1274 ribonuclease III (Rnase III), double-stranded RNA binding motif protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DDD_1469 putative secreted protein K07192 FLOT; flotillin
D DDD_0674 helicase domain protein K26273 SBNO; protein strawberry notch
D DDD_2844 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D DDD_1563 histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DDD_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D DDD_2850 Dps family ferritin-like DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D DDD_0795 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D DDD_0445 cell division ABC transporter, ATP binding component K09812 ftsE; cell division transport system ATP-binding protein
D DDD_0803 ftsI; putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DDD_3518 ftsK; DNA segregation ATPase, translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DDD_0799 ftsW; transmembrane cell division protein K03588 ftsW; cell division protein FtsW
D DDD_1604 ftsX; cell division permease K09811 ftsX; cell division transport system permease protein
D DDD_0794 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D DDD_2144 hypothetical protein K09888 zapA; cell division protein ZapA
D DDD_3077 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DDD_1983 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DDD_1982 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D DDD_1979 mrdB; rod shape-determining membrane protein RodA K05837 rodA; rod shape determining protein RodA
D DDD_2858 regulator protein K03496 parA; chromosome partitioning protein
D DDD_2857 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DDD_2981 parC; topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DDD_2979 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DDD_1424 gidA; glucose-inhibited division protein, GIDA (NAD/FAD-utilizing enzyme) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DDD_1857 gidB; glucose-inhibited methyltransferase division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DDD_2070 xerC; site-specific integrase/recombinase XerD protein K03733 xerC; integrase/recombinase XerC
D DDD_2148 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D DDD_2835 integrase/recombinase K04763 xerD; integrase/recombinase XerD
D DDD_0897 mrp; ATP binding protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DDD_2586 uncharacterized protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DDD_0451 filamentation induced by cAMP protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D DDD_0809 yihA; GTP-binding cell division protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ndo03400]
D DDD_2933 methylated-DNA--protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DDD_2708 phrB2; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D DDD_2709 phr; deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D DDD_2712 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DDD_2484 3mgh; 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D DDD_1564 mutY; adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DDD_3038 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DDD_3334 putative S1/P1 nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D DDD_0646 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DDD_1543 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DDD_2228 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D DDD_1248 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DDD_0139 mutM; DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DDD_1524 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DDD_0289 recD; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D DDD_1643 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DDD_3608 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DDD_1733 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DDD_3489 uvrA2; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DDD_0283 uvrA1; excinuclease ATPase subunit A K03701 uvrA; excinuclease ABC subunit A
D DDD_3345 UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D DDD_0902 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D DDD_0263 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DDD_2078 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DDD_2079 rpoC; DNA-directed RNA polymerase K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DDD_0516 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DDD_0914 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DDD_1256 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DDD_3234 DNA mismatch repair protein, MutS family K07456 mutS2; DNA mismatch repair protein MutS2
D DDD_2786 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D DDD_1809 dnaE; DNA polymerase III K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DDD_2989 dnaN; DNA-directed DNA polymerase III beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DDD_3510 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DDD_1427 holB; DNA polymerase III, delta subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DDD_2352 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_2519 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_3024 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DDD_2611 dnaX; DNA polymerase III gamma/tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DDD_1565 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_0255 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_1488 recA; protein recA K03553 recA; recombination protein RecA
D DDD_1076 ruvA; holliday junction DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D DDD_1082 ruvB; holliday junction specific DNA helicase, subunit ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DDD_0925 ruvC; crossover junction endodeoxyribonuclease ruvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DDD_2994 priA; primosomal protein N' (Replication factor Y)-superfamily II helicase K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DDD_1219 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D DDD_2446 recF; DNA replication and repair protein K03629 recF; DNA replication and repair protein RecF
D DDD_0259 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DDD_0919 recO; putative DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D DDD_0456 recR; recombination DNA repair protein K06187 recR; recombination protein RecR
D DDD_3594 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DDD_0426 ATPase, DUF853 family K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D DDD_2599 gyrA; DNA gyrase (Type IIA topoisomerase), subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DDD_0423 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DDD_0866 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DDD_2244 putative DNA topoisomerase I, eukaryotic-like protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D DDD_2844 hupB; DNA-binding protein HU-beta (NS1) (HU-1) K03530 hupB; DNA-binding protein HU-beta
D DDD_1563 histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D DDD_2846 ATP-dependent dead/H DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_1639 recQ1; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_2306 recQ2; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DDD_1164 dinB; DNA-directed DNA polymerase, impB/mucB/samB family K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DDD_1278 dinB2; DNA polymerase IV, damage-inducible protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DDD_1163 DNA polymerase III alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D DDD_1194 recX; putative transcriptional regulatory protein RecX K03565 recX; regulatory protein
D DDD_1711 ATP-dependent DNA helicase/Lhr-like helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D DDD_1025 nrdA; ribonucleoside-diphosphate reductase K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DDD_1024 ribonucleoside-diphosphate reductase small chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DDD_3276 phosphoesterase, DHH family K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ndo03029]
D DDD_1751 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DDD_0230 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DDD_1049 translation elongation factor Ts K02357 tsf; elongation factor Ts
D DDD_2072 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DDD_0545 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DDD_0495 era; GTP-binding protein K03595 era; GTPase
D DDD_1057 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DDD_1603 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DDD_1190 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DDD_1673 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D DDD_2116 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DDD_2029 nucA; endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D DDD_1565 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_0255 ssb1; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D DDD_1626 bacterial surface antigen D15 family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D DDD_2732 dnaK; chaperone protein dnaK (Heat shock protein HSP70) K04043 dnaK; molecular chaperone DnaK
D DDD_2323 grpE; heat shock protein K03687 GRPE; molecular chaperone GrpE
D DDD_0875 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DDD_0873 groES; 10 kDa chaperonin K04078 groES; chaperonin GroES
D DDD_2324 dnaJ; DnaJ-class molecular chaperone K03686 dnaJ; molecular chaperone DnaJ
D DDD_0361 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DDD_1815 putative ferredoxin K22071 FDX2; ferredoxin-2, mitochondrial
D DDD_1586 NifU-like domain protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D DDD_0897 mrp; ATP binding protein Mrp K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DDD_1602 ctaB; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DDD_2670 ctaA; cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DDD_2345 oxaA; 60 Kd inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DDD_1597 cytochrome c oxidase Cu(A) center assembly protein K07152 SCO1; protein SCO1
D DDD_1294 senC; SenC K07152 SCO1; protein SCO1
D DDD_2887 SPFH domain / Band 7 family protein K17080 PHB1; prohibitin 1
D DDD_2496 htpG; chaperone/heat shock protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ndo02000]
D DDD_3248 ABC transporter K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DDD_0409 ABC-type multidrug/protein/lipid transporter ATP-binding and permease component K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D DDD_0463 multidrug resistance ABC transporter ATP-binding and permease component K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D DDD_2716 ABC-type transporter ATP-binding and permease component K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DDD_1466 bacteriocin ABC transporter, ATP-binding/permease protein K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D DDD_2260 ABC transporter, ATP binding component K15738 uup; ABC transport system ATP-binding/permease protein
D DDD_3078 Mce (Mammalian cell entry) family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DDD_0274 putative ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DDD_0275 ABC transporter, ATP binding component K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DDD_2315 putative ABC peptide transporter, periplasmic binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DDD_0051 dppB; putative binding-protein-dependent transport system inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DDD_2030 dppC; oligopeptide transport permeasee K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DDD_1255 yliA; ABC transporter ATP binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DDD_0120 putative iron (III) ABC transporter, periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DDD_3239 putative iron(III) ABC transporter periplasmic iron-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D DDD_2951 ABC-type iron (III) transport system, permease component K25027 btuC; cobalamin transport system permease protein
D DDD_2950 putative iron (III) ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D DDD_1663 ABC-type metal ion transport system, periplasmic component/surface adhesin K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D DDD_1665 metal ABC transporter, ABC-3 family K11708 troC; manganese/zinc/iron transport system permease protein
D DDD_1666 metal ABC transporter, ABC-3 family K11709 troD; manganese/zinc/iron transport system permease protein
D DDD_1664 zinc ABC transporter, ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D DDD_2269 ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DDD_2270 polysialic K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DDD_3520 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein
D DDD_0216 putative permease, YjgP/YjgQ family K11720 lptG; lipopolysaccharide export system permease protein
D DDD_0076 ABC transporter, ATPase component K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DDD_2699 gldF; gliding motility permease K25151 gldF; gliding motility-associated transport system permease protein
D DDD_1901 ABC transporter, ATPase component K25152 gldA; gliding motility-associated transport system ATP-binding protein
D DDD_2698 gldG; gliding motility protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D DDD_2027 putative ABC transporter, permease component K09808 lolC_E; lipoprotein-releasing system permease protein
D DDD_1481 putative lipoprotein releasing system transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D DDD_3053 lolD; lipoprotein releasing system ATP-binding ABC transporter K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DDD_1604 ftsX; cell division permease K09811 ftsX; cell division transport system permease protein
D DDD_0445 cell division ABC transporter, ATP binding component K09812 ftsE; cell division transport system ATP-binding protein
D DDD_2326 putative ABC-type transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D DDD_0500 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DDD_2664 excinuclease ABC subunit B K01992 ABC-2.P; ABC-2 type transport system permease protein
D DDD_1356 ABC transporter, ATP binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DDD_2325 ABC transporter, ATP binding component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DDD_2665 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DDD_1961 ABC transporter efflux protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_1592 ABC transporter protein, FtsX family, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_1593 ABC transporter, permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_2934 ABC transporter efflux protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_2522 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_2524 putative FtsX-related transmembrane transport protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_2527 putative transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_3479 putative permease domain protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_0150 putative FtsX family ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_2525 putative FtsX-related transmembrane transport protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_2529 putative FtsX-related transmembrane transport protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_2530 putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D DDD_1594 antimicrobial peptide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DDD_2418 antimicrobial peptide ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DDD_2532 ABC-type transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DDD_0151 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DDD_3480 ABC-type transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DDD_2521 putative ABC transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DDD_1314 sufC; FeS assembly ATPase K09013 sufC; Fe-S cluster assembly ATP-binding protein
D DDD_2332 norM; multidrug efflux pump, matE family K26939 norM; MATE family, multidrug efflux pump
D DDD_1238 MATE efflux family sodium antiporter K26937 dinF; MATE family, multidrug efflux pump
D DDD_1135 putative Na+-driven multidrug efflux pump, MatE family K26937 dinF; MATE family, multidrug efflux pump
D DDD_1878 glucose/galactose transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease
D DDD_1887 Bcr/CflA family drug resistance transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DDD_3400 major facilitator superfamily (MFS_1) transporter K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D DDD_3031 major facilitator superfamily permease K06902 UMF1; MFS transporter, UMF1 family
D DDD_2065 putative potassium channel protein, TrkA-N domain-containing K10716 kch; voltage-gated potassium channel
D DDD_3584 cation transporter K10716 kch; voltage-gated potassium channel
D DDD_2391 K+ channel, inward rectifier K08715 IRPC; inward rectifier potassium channel
D DDD_3606 ammonia permease K03320 amt; ammonium transporter, Amt family
D DDD_1143 batA; BatA, aerotolerance operon K07114 yfbK; Ca-activated chloride channel homolog
D DDD_1144 batB; BatB K07114 yfbK; Ca-activated chloride channel homolog
D DDD_0227 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D DDD_3575 von Willebrand factor type A (vWA)domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D DDD_1145 batC; putative BatC, TPR_1 domain protein K07114 yfbK; Ca-activated chloride channel homolog
D DDD_2982 mscL2; large conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D DDD_1331 mscL1; large conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D DDD_0493 small mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D DDD_2653 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D DDD_2654 mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D DDD_3205 small mechanosensitive ion channel K03442 mscS; small conductance mechanosensitive channel
D DDD_0785 mscS2; small conductance mechanosensitive ion channel protein K03442 mscS; small conductance mechanosensitive channel
D DDD_3200 mscS3; small conductance mechanosensitive ion channel protein K16053 ybdG; miniconductance mechanosensitive channel
D DDD_1808 MgtE family, magnesium ion transporter K06213 mgtE; magnesium transporter
D DDD_3507 chemotaxis motB protein, OmpA family K02557 motB; chemotaxis protein MotB
D DDD_1935 MotA/TolQ/ExbB family biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D DDD_1009 exbB; MotA/TolQ/ExbB family proton channel K03561 exbB; biopolymer transport protein ExbB
D DDD_1934 putative tansport related protein K03559 exbD; biopolymer transport protein ExbD
D DDD_3490 corA; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D DDD_2647 CrcB-like protein K06199 crcB; fluoride exporter
D DDD_0487 membrane protein-like protein K08994 yneE; ion channel-forming bestrophin family protein
D DDD_0678 putative mercuric transport protein K08363 merT; mercuric ion transport protein
D DDD_3332 putative integral membrane protein K24915 TMEM175; TMEM175 potassium channel family protein
D DDD_1995 CBS domain protein, transport associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DDD_1566 CorC/HlyC family transporter-associated protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DDD_1697 putative CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DDD_2155 OmpA_membrane domain containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DDD_3005 outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DDD_3563 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DDD_1098 putative outer membrane protein, ompA family K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DDD_1619 OMPP1/FadL/TodX family outer membrane protein transport protein K06076 fadL; long-chain fatty acid transport protein
D DDD_2222 putative TonB-dependent outer membrane protein K16091 fecA; Fe(3+) dicitrate transport protein
D DDD_3238 btuB; TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D DDD_0985 TonB-dependent outer membrane protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D DDD_1532 putative outer membrane protein probably involved in nutrient binding protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D DDD_0355 putative outer membrane protein, probably involved in nutrient binding protein K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D DDD_2772 TonB-dependent receptor, plug K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D DDD_0918 TonB-dependent outer membrane receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D DDD_1768 putative TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DDD_2236 TonB-dependent outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DDD_0726 putative metal ion efflux outer membrane protein family protein K15725 czcC; outer membrane protein, heavy metal efflux system
D DDD_1590 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D DDD_1786 outer membrane efflux protein K12340 tolC; outer membrane protein
D DDD_3530 polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein
D DDD_2266 putative EPS related membrane protein K01991 wza; polysaccharide biosynthesis/export protein
D DDD_1626 bacterial surface antigen D15 family outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D DDD_3598 TPR repeat protein K05807 bamD; outer membrane protein assembly factor BamD
D DDD_1185 hemagluttinin family protein K21449 ata; trimeric autotransporter adhesin
D DDD_1186 hemagluttinin family protein K21449 ata; trimeric autotransporter adhesin
D DDD_1178 BNR/Asp-box repeat domain protein K21449 ata; trimeric autotransporter adhesin
D DDD_0397 fibronectin type III domain protein K21449 ata; trimeric autotransporter adhesin
D DDD_3335 proprotein convertase P K21449 ata; trimeric autotransporter adhesin
D DDD_0512 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D DDD_1029 lipoprotein K21449 ata; trimeric autotransporter adhesin
D DDD_3532 carboxypeptidase T K21449 ata; trimeric autotransporter adhesin
D DDD_0983 permease K16211 malY; maltose/moltooligosaccharide transporter
D DDD_2757 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D DDD_0737 cation efflux system protein, AcrB/AcrD/AcrF family protein K15726 czcA; heavy metal efflux system protein
D DDD_0725 putative copper/silver resistance-related transport membrane protein K07787 cusA; copper/silver efflux system protein
D DDD_1784 cation efflux system (AcrB/AcrD/AcrF family) K18989 vexF; multidrug efflux pump
D DDD_2777 K+-dependent Na+/Ca+ exchanger related protein K07301 yrbG; cation:H+ antiporter
D DDD_0477 sodium/solute symporter K14393 actP; cation/acetate symporter
D DDD_0747 nhaA; putative Na+/H+ antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D DDD_1936 Na+/H+ antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D DDD_0014 nhaC; Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D DDD_2506 Na+-transporting ATP synthase K03498 trkH; trk/ktr system potassium uptake protein
D DDD_1852 trkH; Trk system potassium K+ uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D DDD_1851 trkA; potassium transporter K03499 trkA; trk/ktr system potassium uptake protein
D DDD_2405 sulP; sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D DDD_2181 low affinity sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D DDD_2511 cation transporter K03322 mntH; manganese transport protein
D DDD_1397 acr3; arsenite efflux pump ACR3 K03325 ACR3; arsenite transporter
D DDD_1158 membrane protein containing DUF165 K09125 yhhQ; queuosine precursor transporter
D DDD_1203 MCP methyltransferase, CheR-type K05595 marC; multiple antibiotic resistance protein
D DDD_0072 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D DDD_1915 putative transmembrane protein K05595 marC; multiple antibiotic resistance protein
D DDD_0799 ftsW; transmembrane cell division protein K03588 ftsW; cell division protein FtsW
D DDD_1072 tonB; TonB family protein K03832 tonB; periplasmic protein TonB
D DDD_3061 uncharacterized protein K03832 tonB; periplasmic protein TonB
D DDD_1933 hypothetical protein K03832 tonB; periplasmic protein TonB
D DDD_1763 putative periplasmic component of the Tol biopolymer transport system K03641 tolB; TolB protein
D DDD_1027 hppA; inorganic pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D DDD_0738 cation efflux system protein K15727 czcB; membrane fusion protein, heavy metal efflux system
D DDD_0736 putative cation efflux system transmembrane protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D DDD_1785 membrane fusion efflux transporter, RND family K18990 vexE; membrane fusion protein, multidrug efflux system
D DDD_2267 putative tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DDD_3529 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DDD_0550 putative outer membrane receptor protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D DDD_0334 putative outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D DDD_1533 putative outer membrane protein, probably involved in nutrient binding protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D DDD_0354 putative outer membrane protein, probably involved in nutrient binding protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D DDD_0986 outer membrane protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D DDD_2771 RagB/SusD domain protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D DDD_1519 pnuC; nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D DDD_1265 feoA; putative ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D DDD_1264 Fe2+ transport system protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:ndo02044]
D DDD_1590 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D DDD_1786 outer membrane efflux protein K12340 tolC; outer membrane protein
D DDD_2067 ComEA protein-related protein K02237 comEA; competence protein ComEA
D DDD_1918 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D DDD_2036 ComEC/Rec2-related competence protein K02238 comEC; competence protein ComEC
D DDD_0057 secA; protein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DDD_0420 secD; SecD/SecF/SecDF export membrane protein K12257 secDF; SecD/SecF fusion protein
D DDD_0872 SecG domain containing protein K03075 secG; preprotein translocase subunit SecG
D DDD_0522 secY; preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D DDD_0298 ffh; signal recognition protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DDD_2252 ftsY; cell division protein, signal recognition particle (Docking protein) K03110 ftsY; fused signal recognition particle receptor
D DDD_0404 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DDD_2345 oxaA; 60 Kd inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DDD_1975 Sec-independent protein translocase protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA
D DDD_1436 Sec-independent protein secretion pathway components K03116 tatA; sec-independent protein translocase protein TatA
D DDD_2304 putative sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ndo02042]
D DDD_1995 CBS domain protein, transport associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DDD_1566 CorC/HlyC family transporter-associated protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DDD_1697 putative CBS domain-containing protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DDD_0027 hemolysin III family channel protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ndo02022]
D DDD_1053 sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DDD_3587 rprX; sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DDD_1054 transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DDD_0479 response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D DDD_1874 two component transcriptional regulator, LuxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DDD_0823 putative fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DDD_3250 two component regulator three Y motif family K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D DDD_2561 putative two-component sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D DDD_2650 sensor protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D DDD_1634 Sensor protein K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D DDD_3330 putative two-component sensor histidine kinase transcriptional regulator K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D DDD_0943 histidine kinase family K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D DDD_0020 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D DDD_0393 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D DDD_0396 lytT; response regulator K02477 K02477; two-component system, LytTR family, response regulator
D DDD_1261 response regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D DDD_2488 response regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D DDD_0944 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D DDD_2995 putative response regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D DDD_3327 two component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D DDD_0749 two component, sigma54 specific, transcriptional regulator, Fis family protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D DDD_1111 sensory transduction histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:ndo02035]
D DDD_3507 chemotaxis motB protein, OmpA family K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ndo04812]
D DDD_1983 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DDD_0794 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D DDD_0795 ftsA; cell division protein K03590 ftsA; cell division protein FtsA
D DDD_2858 regulator protein K03496 parA; chromosome partitioning protein
D DDD_2857 ParB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ndo04147]
D DDD_2496 htpG; chaperone/heat shock protein K04079 HSP90A; molecular chaperone HtpG
D DDD_0513 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DDD_2575 gap; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_3412 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_0585 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DDD_1429 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DDD_1276 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DDD_0054 ppiC; peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DDD_2806 Thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D DDD_1469 putative secreted protein K07192 FLOT; flotillin
D DDD_2887 SPFH domain / Band 7 family protein K17080 PHB1; prohibitin 1
D DDD_0875 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DDD_2732 dnaK; chaperone protein dnaK (Heat shock protein HSP70) K04043 dnaK; molecular chaperone DnaK
D DDD_0910 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DDD_2039 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D DDD_2245 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DDD_2072 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D DDD_1771 putative histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DDD_3025 fadD; long-chain-fatty-acid--CoA ligase (Synthetase) K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DDD_2603 atoB; acetoacetyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DDD_1515 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DDD_2021 adk; putative adenylate kinase/hypoxanthine phosphoribosyltransferase fusion protein K00939 adk; adenylate kinase [EC:2.7.4.3]
D DDD_0177 adenine phosphoribosyltransferase (APRT) K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DDD_2334 fumarylacetoacetate (FAA) hydrolase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D DDD_1798 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DDD_0788 glgB; glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DDD_2775 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DDD_1192 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DDD_0906 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D DDD_3350 pcbD; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D DDD_3372 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DDD_1805 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DDD_1984 purH; phosphoribosylaminoimidazole carboxy formyl formyltransferase, bifunctional purine biosynthesis protein K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DDD_3208 transmembrane metalloprotease M48, Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DDD_2147 aldehyde reductase K00002 AKR1A1; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DDD_2157 lpdA2; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_3568 lpd; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DDD_1034 etfA; electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D DDD_0050 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DDD_3316 putative phosphoglycerate mutase family protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ndo02048]
D DDD_0824 type III restriction enzyme, res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D DDD_0827 type I restriction-modification system S(specificity) subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D DDD_0829 hsdM; putative DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D DDD_2958 SfeI DNA methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DDD_3194 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_3301 cytosine-specific methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DDD_2163 chpA; putative growth inhibitor, PemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D DDD_2748 yoeB; toxin YoeB K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D DDD_2749 prevent-host-death family protein K19159 yefM; antitoxin YefM
D DDD_0260 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D DDD_1175 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D DDD_2919 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D DDD_1837 prophage maintenance system killer protein K07341 doc; death on curing protein
D DDD_3429 plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D DDD_3144 putative DNA binding protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D DDD_0794 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D DDD_1983 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DDD_2981 parC; topoisomerase IV, subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DDD_2979 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DDD_1419 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DDD_0361 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:ndo04052]
D DDD_0647 nadV; nicotinamide phosphoribosyl transferase family protein K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ndo04090]
D DDD_2039 dipeptidyl-peptidase IV K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:ndo01504]
D DDD_0122 peptidase M56, BlaR1 K02172 blaR1; bla regulator protein blaR1
D DDD_0965 putative peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D DDD_3471 putative antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_0964 putative antibiotic resistance-related regulatory protein, Penicillinase repressor family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_0123 antibiotic resistance-related regulatory protein K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D DDD_1506 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D DDD_2257 vanW; putative vancomycin B-type resistance protein K18346 vanW; vancomycin resistance protein VanW
D DDD_1590 putative outer membrane transport/efflux protein K12340 tolC; outer membrane protein
D DDD_1786 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ndo00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ndo03100]
D DDD_t0009 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DDD_t0025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DDD_t0036 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DDD_t0002 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DDD_t0004 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DDD_t0042 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DDD_t0012 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DDD_t0021 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DDD_t0006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DDD_t0013 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DDD_t0016 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DDD_t0023 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DDD_t0034 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DDD_t0019 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DDD_t0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DDD_t0031 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DDD_t0001 tRNA-His K14226 tRNA-His; tRNA His
D DDD_t0015 tRNA-His K14226 tRNA-His; tRNA His
D DDD_t0024 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DDD_t0035 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DDD_t0037 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0010 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0007 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0018 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0017 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DDD_t0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DDD_t0014 tRNA-Met K14230 tRNA-Met; tRNA Met
D DDD_t0041 tRNA-Met K14230 tRNA-Met; tRNA Met
D DDD_t0005 tRNA-Met K14230 tRNA-Met; tRNA Met
D DDD_t0028 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DDD_t0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DDD_t0003 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DDD_t0039 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DDD_t0026 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DDD_t0032 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DDD_t0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DDD_t0033 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DDD_t0030 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DDD_t0027 tRNA-Val K14237 tRNA-Val; tRNA Val
D DDD_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DDD_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DDD_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DDD_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DDD_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DDD_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DDD_0341 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D DDD_3474 gdhB; glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D DDD_0991 oxidoreductase, zinc-containing alcohol dehydrogenase family K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D DDD_1843 thioredoxin reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D DDD_0590 msrA1; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DDD_3055 msrA2; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DDD_2765 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DDD_2479 selR; methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DDD_2480 msrB; methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DDD_0309 mauG; cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D DDD_1307 putative Cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D DDD_2769 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D DDD_0938 putative alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D DDD_3039 peroxiredoxin, AhpC/Tsa family K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DDD_3516 tpx; thiol peroxidase, AhpC/TSA family K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DDD_2632 organic hydroperoxide reductase K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D DDD_3373 putative Pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DDD_2930 pirin domain-containing protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DDD_0295 putative transmembrane protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D DDD_1131 putative arsenate reductase, ArsC family K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D DDD_1802 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D DDD_1395 arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D DDD_2590 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DDD_2592 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DDD_2401 tpm; thiopurine methyltransferase K21552 HOL; methyl halide transferase [EC:2.1.1.165]
D DDD_2464 carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D DDD_0087 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DDD_3613 putative histone acetyltransferase HPA 2 K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D DDD_1290 putative acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D DDD_2499 putative glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D DDD_1291 aat; Leu/Phe-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D DDD_3088 glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D DDD_1957 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D DDD_0417 lgt; putative prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DDD_2052 apbE; thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DDD_0459 putative transmembrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D DDD_2537 UPF0061 protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D DDD_0654 Appr-1-p processing enzyme family protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D DDD_1134 putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DDD_2498 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DDD_3618 thioesterase superfamily protein-possibly 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DDD_3528 capsular polysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D DDD_2607 phosphoglycerate/bisphosphoglycerate mutase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D DDD_2604 putative membrane-associated HD superfamily hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D DDD_1930 tatD; Dnase TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DDD_0841 endonuclease/exonuclease/phosphatase K11995 DNASE1L; deoxyribonuclease-1-like protein [EC:3.1.21.-]
D DDD_1620 putative hydrolase (Alpha/beta hydrolase superfamily) K01175 ybfF; esterase [EC:3.1.-.-]
D DDD_2114 arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D DDD_0979 glycosyl hydrolase, alpha-amylase family K21575 susA; neopullulanase [EC:3.2.1.135]
D DDD_0333 unsaturated glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D DDD_3448 5,10-methylenetetrahydrofolate reductase K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D DDD_0713 hypothetical protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DDD_0378 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DDD_1739 putative polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D DDD_0135 N-acetylglucosamine deacetylase LmbE K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D DDD_3537 LmbE-like protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D DDD_3279 yjgF; translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DDD_2947 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DDD_1139 magnesium chelatase subunit I K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DDD_2796 ATPase, AAA_3 family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DDD_2378 moxR; methanol dehydrogenase regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DDD_0832 putative ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D DDD_3460 sugar kinase, yjeF family K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D DDD_0330 alyll; putative alginate lyase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26]
D DDD_2639 methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D DDD_3459 cphA; cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D DDD_1986 UDP-N-acetylmuramate-alanine ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D DDD_1867 nqrA; Na-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D DDD_1868 nqrB; Na-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D DDD_1869 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D DDD_1870 nqrD; Na-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D DDD_1871 nqrE; Na-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D DDD_1872 nqrF; NADH, ubiquinone oxidoreductase, Na translocating K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D DDD_0742 cation-transporting ATPase, P-type, putative zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D DDD_2337 hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D DDD_1033 etfB; electron transfer flavoprotein K03521 fixA; electron transfer flavoprotein beta subunit
D DDD_1587 DUF1458 domain containing protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DDD_1654 coproporphyrinogen III oxidase K06203 cysZ; CysZ protein
D DDD_2584 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D DDD_1217 integral membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
D DDD_0278 hypothetical protein K15977 K15977; putative oxidoreductase
D DDD_3047 putative phospholipase/carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
D DDD_1636 protein containing DUF1094 K26958 brxA_B; bacilliredoxin
D DDD_3029 hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DDD_3217 cspB; cold shock protein K03704 cspA; cold shock protein
C 99974 Translation
D DDD_1790 exonuclease of the beta-lactamase fold involved in RNA processing-like protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D DDD_1318 putative lipoprotein K03668 hslJ; heat shock protein HslJ
D DDD_0047 ribosomal protein L11 methyltransferase K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D DDD_1616 tig; cell division trigger factor K03545 tig; trigger factor
D DDD_2838 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D DDD_2559 comM; ATPase with chaperone activity, competance-related, ComM K07391 comM; magnesium chelatase family protein
D DDD_2205 osmC; putative osmotically inducible protein C (OsmC) like protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D DDD_1050 ogt2; DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D DDD_1478 HNH endonuclease family protein K07454 K07454; putative restriction endonuclease
D DDD_0557 radC; DNA repair protein K03630 radC; DNA repair protein RadC
D DDD_3253 rmuC; DNA recombination protein rmuC K09760 rmuC; DNA recombination protein RmuC
D DDD_1752 protein belonging to UPF0102 K07460 yraN; putative endonuclease
D DDD_2541 protein containing N-terminal domain of the UvrABC system protein C K07461 K07461; putative endonuclease
D DDD_1377 putative excinuclease ABC, C subunit K07461 K07461; putative endonuclease
D DDD_2165 excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D DDD_2192 excinuclease ABC, C subunit, N-terminal K07461 K07461; putative endonuclease
D DDD_2199 excinuclease ABC, C subunit, N-terminal K07461 K07461; putative endonuclease
D DDD_0209 excinuclease ABC, C subunit domain protein K07461 K07461; putative endonuclease
D DDD_2766 putative endonuclease K07461 K07461; putative endonuclease
D DDD_1456 Smf protein, DNA processing chain A K04096 smf; DNA processing protein
D DDD_0554 ATPase related to the helicase subunit of the holliday junction resolvase K07478 ycaJ; putative ATPase
D DDD_1254 polysaccharide biosynthesis protein K07501 K07501; 3'-5' exonuclease
D DDD_3430 IS110 family transposase K07486 K07486; transposase
D DDD_3433 IS110 family transposase K07486 K07486; transposase
D DDD_2817 IS110 family transposase K07486 K07486; transposase
D DDD_2046 putative transposase K07491 rayT; REP-associated tyrosine transposase
D DDD_2053 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D DDD_2097 tpn; transposase K07491 rayT; REP-associated tyrosine transposase
D DDD_1881 putative transposase K07491 rayT; REP-associated tyrosine transposase
C 99979 Viral proteins
C 99998 Others
D DDD_1474 PspA/IM30 family protein K03969 pspA; phage shock protein A
D DDD_0641 putative rhodanese-related sulfurtransferase K03972 pspE; phage shock protein E
D DDD_3499 DUF149 domain containing protein K09747 ebfC; nucleoid-associated protein EbfC
D DDD_2227 cry; deoxyribodipyrimidine photo-lyase K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DDD_0101 formate/nitrite transporter K21990 yfdC; formate-nitrite transporter family protein
D DDD_2364 putative glycosyl hydrolase K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D DDD_1505 ATP/ADP translocase-like protein K03301 TC.AAA; ATP:ADP antiporter, AAA family
D DDD_2038 putative transmembrane di-/tripeptide permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D DDD_3414 sglT; sodium solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D DDD_2634 Na+/proline symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D DDD_2066 agcS; transmembrane Na(+)-linked D-alanine transporter protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D DDD_1036 nupC; sodium/nucleoside co-transporter permease K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D DDD_0176 putative bacteriophage resolvase/recombinase K06400 spoIVCA; site-specific DNA recombinase
D DDD_0662 putative bacteriophage resolvase/recombinase K06400 spoIVCA; site-specific DNA recombinase
D DDD_0853 tnpX; site-specific recombinase K06400 spoIVCA; site-specific DNA recombinase
D DDD_1548 peptidase M23B K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D DDD_0287 typA; GTP-binding translation elongation factor-like TypA/BipA K06207 typA; GTP-binding protein
D DDD_2702 phoH; phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D DDD_1628 OmpH family outer membrane protein K06142 hlpA; outer membrane protein
D DDD_2125 ompH; outer membrane protein K06142 hlpA; outer membrane protein
D DDD_2217 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D DDD_0310 glycosyl hydrolase K07273 acm; lysozyme
D DDD_1589 putative membrane fusion efflux protein, HlyD family K02005 ABC.CD.TX; HlyD family secretion protein
D DDD_1591 membrane fusion efflux transporter, RND family K02005 ABC.CD.TX; HlyD family secretion protein
D DDD_2533 efflux transporter, MFP component, RND family protein K02005 ABC.CD.TX; HlyD family secretion protein
D DDD_0152 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D DDD_0317 CreD-like inner membrane protein K06143 creD; inner membrane protein
D DDD_0987 putative lipoprotein K21571 susE_F; starch-binding outer membrane protein SusE/F
D DDD_2022 putative lipoprotein K21571 susE_F; starch-binding outer membrane protein SusE/F
C 99994 Others
D DDD_3143 terC; inner membrane TerC protein K05794 terC; tellurite resistance protein TerC
D DDD_3610 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D DDD_1863 glycosyl transferase K06195 apaG; ApaG protein
D DDD_3440 putative integral membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DDD_1674 phenylalanyl-tRNA synthetase alpha subunit K03558 cvpA; membrane protein required for colicin V production
D DDD_1403 ElaA-like GNAT family acetyltransferase K02348 elaA; ElaA protein
D DDD_2195 putative carnitine operon, caiE-like protein K02617 paaY; phenylacetic acid degradation protein
D DDD_0414 csaA; putative secretion chaperone contains tRNA binding domain K06878 K06878; tRNA-binding protein
D DDD_1069 uncharacterized protein K06886 glbN; hemoglobin
D DDD_0903 putative patatin-like phospholipase K07001 K07001; NTE family protein
D DDD_2129 phospholipase K07001 K07001; NTE family protein
D DDD_0016 patatin-like phospholipase K07001 K07001; NTE family protein
D DDD_0555 HAD-superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D DDD_1312 sufB; FeS assembly permease K09014 sufB; Fe-S cluster assembly protein SufB
D DDD_1315 sufD; ABC-type transport system involved in Fe-S cluster assembly K09015 sufD; Fe-S cluster assembly protein SufD
D DDD_0140 integral membrane protein K07038 K07038; inner membrane protein
D DDD_3228 ribonuclease BN family K07058 K07058; membrane protein
D DDD_2515 ribonuclease BN family K07058 K07058; membrane protein
D DDD_1319 protein containing Fe-S metabolism associated domain K02426 sufE; cysteine desulfuration protein SufE
D DDD_1483 sulfurtransferase K07146 K07146; UPF0176 protein
D DDD_0119 putative LemA family protein K03744 lemA; LemA protein
D DDD_3470 LemA family protein K03744 lemA; LemA protein
D DDD_0187 secreted protein containing DUF218 K03748 sanA; SanA protein
D DDD_1617 membrane protein ocontaining DUF360 K08972 K08972; putative membrane protein
D DDD_3406 putative membrane protein containing DUF368 K08974 K08974; putative membrane protein
D DDD_3407 putative membrane protein K08974 K08974; putative membrane protein
D DDD_1596 yozB; YozB K08976 K08976; putative membrane protein
D DDD_2736 ydbT; YdbT K08981 K08981; putative membrane protein
D DDD_3242 integral membrane protein K08987 K08987; putative membrane protein
D DDD_2543 putative Sec-C motif domain protein K09858 K09858; SEC-C motif domain protein
D DDD_3201 phnA; alkylphosphonate uptake protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D DDD_1209 putative ankyrin-related protein K06867 K06867; uncharacterized protein
D DDD_0957 ankyrin repeat domain protein K06867 K06867; uncharacterized protein
D DDD_2905 DUF477 domain containing protein K06872 K06872; uncharacterized protein
D DDD_0117 membrane protein containing DUF477 K06872 K06872; uncharacterized protein
D DDD_2877 metal-dependent phosphohydrolase family protein K06885 K06885; uncharacterized protein
D DDD_2414 hydrolase K06889 K06889; uncharacterized protein
D DDD_2092 hydrolase K06889 K06889; uncharacterized protein
D DDD_3441 hypothetical protein K06889 K06889; uncharacterized protein
D DDD_1299 alpha/beta superfamily hydrolase K06889 K06889; uncharacterized protein
D DDD_0302 fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein
D DDD_1828 HD superfamily hydrolase K06950 K06950; uncharacterized protein
D DDD_0917 putative phosphoesterase K06953 K06953; uncharacterized protein
D DDD_1067 neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D DDD_1968 acetyltransferase K06975 K06975; uncharacterized protein
D DDD_0490 acetyltransferase K06975 K06975; uncharacterized protein
D DDD_1243 peptidase, S15 family K06978 K06978; uncharacterized protein
D DDD_1123 succinylglutamate desuccinylase / aspartoacylase family protein K06987 K06987; uncharacterized protein
D DDD_0434 ring-cleaving dioxygenase of extradiol dioxygenase family K06991 K06991; uncharacterized protein
D DDD_2467 putative efflux transporter, RND superfamily K07003 K07003; uncharacterized protein
D DDD_1018 putative efflux transporter, RND superfamily K07003 K07003; uncharacterized protein
D DDD_2812 putative esterase K07017 K07017; uncharacterized protein
D DDD_1473 uncharacterized protein K07069 K07069; uncharacterized protein
D DDD_1832 YfcH-like protein, NAD dependent epimerase/dehydratase family K07071 K07071; uncharacterized protein
D DDD_2318 putative sugar nucleotide epimerase K07071 K07071; uncharacterized protein
D DDD_1323 DNA polymerase, beta domain protein region K07075 K07075; uncharacterized protein
D DDD_3045 nucleotidyltransferase family protein K07075 K07075; uncharacterized protein
D DDD_0780 Na+-dependent bicarbonate transporter K07086 K07086; uncharacterized protein
D DDD_2135 permease K07089 K07089; uncharacterized protein
D DDD_0777 putative membrane protein containing DUF81 K07090 K07090; uncharacterized protein
D DDD_2626 putative permease K07090 K07090; uncharacterized protein
D DDD_0466 putative phosphoesterase K07095 K07095; uncharacterized protein
D DDD_1737 putative integral membrane phosphoesterase, calcineurin-like family K07098 K07098; uncharacterized protein
D DDD_0774 membrane protein containing YeeE/YedE domain K07112 K07112; uncharacterized protein
D DDD_0775 membrane protein containing YeeE/YedE domain K07112 K07112; uncharacterized protein
D DDD_2485 short chain dehydrogenase K07124 K07124; uncharacterized protein
D DDD_0603 AAA ATPase K07133 K07133; uncharacterized protein
D DDD_0179 Putative FAD-dependent dehydrogenase K07137 K07137; uncharacterized protein
D DDD_0589 Zn-ribbon protein K07164 K07164; uncharacterized protein
D DDD_2100 rnpA; cysteinyl-tRNA synthetase K08998 K08998; uncharacterized protein
D DDD_1035 protein containing DUF151 K08999 K08999; uncharacterized protein
D DDD_0418 secreted protein containing DUF192 K09005 K09005; uncharacterized protein
D DDD_0793 YqeY family protein K09117 K09117; uncharacterized protein
D DDD_2848 DUF493 domain containing protein K09158 K09158; uncharacterized protein
D DDD_2255 DUF1684 domain containing protein K09164 K09164; uncharacterized protein
D DDD_2735 membrane protein containing DUF304 K09167 K09167; uncharacterized protein
D DDD_3112 cupin_5 domain containing protein K09705 K09705; uncharacterized protein
D DDD_1680 DUF458 domain containing protein K09776 K09776; uncharacterized protein
D DDD_2862 membrane protein containing DUF808 K09781 K09781; uncharacterized protein
D DDD_0203 integral membrane protein K09792 K09792; uncharacterized protein
D DDD_0248 nucleic acid binding protein K00243 K00243; uncharacterized protein
D DDD_3132 hypothetical protein K09822 K09822; uncharacterized protein
D DDD_0558 DUF328 domain containing protein K09861 K09861; uncharacterized protein
D DDD_1896 hypothetical protein K09931 K09931; uncharacterized protein
D DDD_0973 DUF2064 domain containing protein K09931 K09931; uncharacterized protein
D DDD_0007 hypothetical protein K09940 K09940; uncharacterized protein
D DDD_2223 UPF0339 protein in ptx operon 5'region K09946 K09946; uncharacterized protein
D DDD_0810 hypothetical protein K09954 K09954; uncharacterized protein
D DDD_3173 DUF779 domain containing protein K09959 K09959; uncharacterized protein
D DDD_0899 Uncharacterized protein K09966 K09966; uncharacterized protein
D DDD_0049 DUF1287 domain containing protein K09974 K09974; uncharacterized protein
D DDD_2852 DUF1853 domain containing protein K09977 K09977; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2024