+D GENES KO
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KEGG Orthology (KO) - Nocardioides daphniae
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ndp00010]
D E2C04_06755 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D E2C04_08690 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D E2C04_02110 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D E2C04_08660 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D E2C04_08650 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D E2C04_08655 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D E2C04_09540 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D E2C04_03940 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D E2C04_07150 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D E2C04_11770 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D E2C04_10750 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D E2C04_11340 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D E2C04_10420 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_02970 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_15400 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_10770 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_16280 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D E2C04_01085 hypothetical protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D E2C04_00855 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
C 00020 Citrate cycle (TCA cycle) [PATH:ndp00020]
D E2C04_15075 citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1]
D E2C04_07540 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_02970 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_15400 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_13480 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D E2C04_13485 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D E2C04_16375 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D E2C04_13405 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D E2C04_13395 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D E2C04_13445 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D E2C04_11150 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D E2C04_15985 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D E2C04_10750 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D E2C04_11340 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D E2C04_10420 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ndp00030]
D E2C04_08690 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D E2C04_08675 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D E2C04_00015 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D E2C04_08695 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D E2C04_05430 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D E2C04_03820 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D E2C04_14285 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D E2C04_02110 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
C 00040 Pentose and glucuronate interconversions [PATH:ndp00040]
D E2C04_03265 SDR family oxidoreductase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D E2C04_01240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D E2C04_14715 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
C 00051 Fructose and mannose metabolism [PATH:ndp00051]
D E2C04_02830 cupin domain-containing protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D E2C04_12825 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D E2C04_12875 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D E2C04_02860 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D E2C04_02865 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D E2C04_02110 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D E2C04_08660 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D E2C04_05430 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ndp00052]
D E2C04_08915 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D E2C04_02870 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D E2C04_15645 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D E2C04_14715 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D E2C04_06755 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D E2C04_12910 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
C 00053 Ascorbate and aldarate metabolism [PATH:ndp00053]
D E2C04_01240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_13130 NAD(P)-dependent oxidoreductase K18981 udh; uronate dehydrogenase [EC:1.1.1.203]
C 00500 Starch and sucrose metabolism [PATH:ndp00500]
D E2C04_14715 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D E2C04_03800 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D E2C04_14270 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D E2C04_14215 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D E2C04_15960 glycoside hydrolase family 65 protein K05342 treP; alpha,alpha-trehalose phosphorylase [EC:2.4.1.64]
D E2C04_06755 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D E2C04_08690 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ndp00520]
D E2C04_14390 signal peptidase I K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D E2C04_13735 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D E2C04_13745 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D E2C04_03815 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D E2C04_02750 NAD-dependent epimerase/dehydratase family protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D E2C04_06755 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D E2C04_00855 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D E2C04_14715 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D E2C04_01240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D E2C04_08915 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D E2C04_02870 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D E2C04_15645 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D E2C04_12910 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D E2C04_08690 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D E2C04_02830 cupin domain-containing protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D E2C04_12825 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D E2C04_12875 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D E2C04_02860 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D E2C04_02865 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
C 00620 Pyruvate metabolism [PATH:ndp00620]
D E2C04_16280 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D E2C04_02970 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_15400 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_10750 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D E2C04_11340 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D E2C04_10420 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_10770 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D E2C04_07150 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D E2C04_16950 biotin/lipoyl-binding carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D E2C04_13075 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D E2C04_11375 acyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_16375 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D E2C04_08415 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D E2C04_16935 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D E2C04_12125 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D E2C04_15985 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D E2C04_13445 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D E2C04_11150 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D E2C04_11770 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11555 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ndp00630]
D E2C04_16280 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D E2C04_13445 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D E2C04_15075 citrate synthase 2 K01647 CS; citrate synthase [EC:2.3.3.1]
D E2C04_07540 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11815 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D E2C04_13075 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D E2C04_13020 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D E2C04_13025 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D E2C04_11375 acyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D E2C04_10720 catalase K03781 katE; catalase [EC:1.11.1.6]
D E2C04_10465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10655 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10200 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_09345 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D E2C04_06515 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:ndp00640]
D E2C04_16280 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D E2C04_06310 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D E2C04_01605 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D E2C04_01610 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_15875 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_16950 biotin/lipoyl-binding carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D E2C04_13075 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D E2C04_11375 acyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D E2C04_13020 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D E2C04_13025 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D E2C04_11815 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D E2C04_13485 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D E2C04_13480 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D E2C04_12350 hypothetical protein K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
C 00650 Butanoate metabolism [PATH:ndp00650]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03305 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D E2C04_11850 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_03135 enoyl-CoA hydratase/isomerase family protein K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_13405 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D E2C04_13395 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D E2C04_16375 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D E2C04_02970 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_15400 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_00975 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D E2C04_16430 3-oxoacid CoA-transferase subunit B K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D E2C04_05840 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ndp00660]
D E2C04_05840 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D E2C04_13485 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D E2C04_13480 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D E2C04_06010 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D E2C04_06015 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D E2C04_05895 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ndp00562]
D E2C04_08335 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D E2C04_17375 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D E2C04_08660 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ndp00190]
D E2C04_15475 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D E2C04_15470 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D E2C04_15460 nuoE; NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D E2C04_15455 nuoF; NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D E2C04_15445 nuoH; NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D E2C04_15440 nuoI; NADH-quinone oxidoreductase subunit NuoI K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D E2C04_15435 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D E2C04_15430 nuoK; NADH-quinone oxidoreductase subunit NuoK K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D E2C04_15425 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D E2C04_15420 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D E2C04_15415 nuoN; NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D E2C04_02425 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D E2C04_13405 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D E2C04_13395 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D E2C04_06570 ubiquinol-cytochrome C reductase K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D E2C04_06565 ubiquinol-cytochrome c reductase cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8]
D E2C04_06575 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8]
D E2C04_08705 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D E2C04_06550 cytochrome c oxidase subunit 4 K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D E2C04_06580 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D E2C04_08715 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D E2C04_10330 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D E2C04_11905 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D E2C04_11895 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D E2C04_11900 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D E2C04_11910 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D E2C04_11890 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D E2C04_11915 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D E2C04_11920 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D E2C04_15860 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D E2C04_02590 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:ndp00710]
D E2C04_08655 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D E2C04_08650 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D E2C04_02110 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D E2C04_05430 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D E2C04_08660 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D E2C04_08695 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D E2C04_11770 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D E2C04_13445 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:ndp00720]
D E2C04_11770 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D E2C04_15985 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D E2C04_13445 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D E2C04_13405 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D E2C04_13395 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D E2C04_13480 sucD; succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D E2C04_13485 sucC; ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_02970 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_15400 2-oxoacid:ferredoxin oxidoreductase subunit beta K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D E2C04_07540 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D E2C04_16950 biotin/lipoyl-binding carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D E2C04_11815 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D E2C04_13455 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D E2C04_16280 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:ndp00680]
D E2C04_10530 aldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D E2C04_10200 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D E2C04_03940 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D E2C04_13445 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D E2C04_02110 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D E2C04_16280 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D E2C04_09540 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D E2C04_15095 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D E2C04_08850 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D E2C04_06020 cofC; 2-phospho-L-lactate guanylyltransferase K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105]
D E2C04_12860 2-phospho-L-lactate transferase K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
C 00910 Nitrogen metabolism [PATH:ndp00910]
D E2C04_14155 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D E2C04_14160 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D E2C04_14145 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D E2C04_14135 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D E2C04_16265 hypothetical protein K00360 nasB; assimilatory nitrate reductase electron transfer subunit [EC:1.7.99.-]
D E2C04_16255 nirB; nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D E2C04_03560 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D E2C04_16250 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D E2C04_04710 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D E2C04_12110 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D E2C04_10465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10655 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_07140 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D E2C04_10645 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D E2C04_07375 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ndp00920]
D E2C04_15390 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D E2C04_15380 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D E2C04_03690 LLM class flavin-dependent oxidoreductase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D E2C04_03695 NADPH-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D E2C04_08885 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D E2C04_03915 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D E2C04_10210 phosphoadenylyl-sulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D E2C04_10160 DoxX family protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D E2C04_02665 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D E2C04_04080 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D E2C04_06320 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D E2C04_03680 sfnG; dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ndp00061]
D E2C04_16950 biotin/lipoyl-binding carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D E2C04_13075 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D E2C04_11375 acyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D E2C04_11365 acyl carrier protein K02078 acpP; acyl carrier protein
D E2C04_16770 acyl carrier protein K02078 acpP; acyl carrier protein
D E2C04_11355 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D E2C04_11360 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D E2C04_11370 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D E2C04_04990 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_07645 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_08810 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_11200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_11645 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_12270 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_15630 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_17250 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ndp00071]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03250 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_15875 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D E2C04_03260 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D E2C04_17040 acyl-CoA dehydrogenase K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D E2C04_11645 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_12270 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_15630 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_17250 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_17155 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ndp00561]
D E2C04_06515 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_10770 NAD(P)-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D E2C04_06795 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D E2C04_07990 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D E2C04_06770 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D E2C04_08085 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D E2C04_02145 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D E2C04_09100 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D E2C04_04695 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D E2C04_15920 DUF1298 domain-containing protein K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
D E2C04_16750 wax ester/triacylglycerol synthase family O-acyltransferase K00635 tgs; diacylglycerol O-acyltransferase / wax synthase [EC:2.3.1.20 2.3.1.75]
C 00564 Glycerophospholipid metabolism [PATH:ndp00564]
D E2C04_06770 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D E2C04_08085 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D E2C04_03745 cytidyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D E2C04_02145 YegS/Rv2252/BmrU family lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D E2C04_09100 diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D E2C04_01090 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D E2C04_02700 hypothetical protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D E2C04_09170 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D E2C04_12260 glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D E2C04_06280 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D E2C04_10280 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D E2C04_08535 phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D E2C04_15935 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D E2C04_09365 CDP-alcohol phosphatidyltransferase family protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:ndp00592]
D E2C04_15875 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D E2C04_03250 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ndp01040]
D E2C04_15875 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
D E2C04_07630 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ndp00230]
D E2C04_03820 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D E2C04_02320 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D E2C04_13465 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D E2C04_02220 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D E2C04_02325 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D E2C04_12995 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D E2C04_12990 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D E2C04_13460 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D E2C04_14615 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D E2C04_12580 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D E2C04_02455 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D E2C04_07000 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D E2C04_15840 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D E2C04_13620 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D E2C04_13630 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D E2C04_05520 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D E2C04_05145 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D E2C04_13585 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D E2C04_07725 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D E2C04_03955 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D E2C04_15700 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D E2C04_12370 GTP pyrophosphokinase family protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D E2C04_02150 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D E2C04_06530 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D E2C04_13235 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D E2C04_15205 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D E2C04_13875 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D E2C04_08330 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D E2C04_16095 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D E2C04_16090 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D E2C04_16085 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D E2C04_10645 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:ndp00240]
D E2C04_07695 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D E2C04_07665 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D E2C04_07670 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D E2C04_07715 dihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D E2C04_07710 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D E2C04_07700 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D E2C04_02075 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D E2C04_07720 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D E2C04_06270 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D E2C04_05520 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D E2C04_13035 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D E2C04_08030 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D E2C04_08080 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D E2C04_13220 ATP-binding protein K00876 udk; uridine kinase [EC:2.7.1.48]
D E2C04_14615 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D E2C04_02455 pyrimidine/purine nucleoside phosphorylase K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D E2C04_16880 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D E2C04_07660 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D E2C04_13250 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D E2C04_01810 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D E2C04_16025 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D E2C04_07490 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D E2C04_13245 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D E2C04_10380 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D E2C04_11205 malonic semialdehyde reductase K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ndp00250]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D E2C04_15770 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D E2C04_03485 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D E2C04_17425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D E2C04_16795 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D E2C04_02150 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D E2C04_07665 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D E2C04_07140 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D E2C04_04710 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D E2C04_12110 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D E2C04_10465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10655 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_07695 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D E2C04_13735 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D E2C04_02320 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ndp00260]
D E2C04_16485 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D E2C04_11985 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D E2C04_11975 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D E2C04_11980 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D E2C04_10200 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D E2C04_06515 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D E2C04_09540 histidine phosphatase family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D E2C04_15095 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D E2C04_08850 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_09345 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
D E2C04_04005 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D E2C04_04090 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D E2C04_14030 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D E2C04_07125 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D E2C04_07120 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D E2C04_12240 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:ndp00270]
D E2C04_04005 cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D E2C04_09005 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D E2C04_07740 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D E2C04_08920 nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D E2C04_07000 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D E2C04_16485 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D E2C04_11985 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D E2C04_04080 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D E2C04_02680 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D E2C04_06320 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D E2C04_05900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_10125 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_16840 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D E2C04_02665 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D E2C04_13445 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D E2C04_15095 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ndp00280]
D E2C04_05900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_10125 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_02340 Glu/Leu/Phe/Val dehydrogenase K00271 vdh; valine dehydrogenase (NAD+) [EC:1.4.1.23]
D E2C04_01605 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D E2C04_01610 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_03260 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D E2C04_13045 acyl-CoA dehydrogenase K11410 acdH; short-chain 2-methylacyl-CoA dehydrogenase [EC:1.3.8.5]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_03250 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D E2C04_13075 ATP-grasp domain-containing protein K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D E2C04_13020 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15]
D E2C04_13025 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit
D E2C04_11375 acyl-CoA carboxylase subunit beta K18472 accD6; acetyl-CoA/propionyl-CoA carboxylase carboxyl transferase subunit [EC:6.4.1.2 6.4.1.3 2.1.3.15]
D E2C04_11815 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_00965 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D E2C04_00975 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D E2C04_16430 3-oxoacid CoA-transferase subunit B K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ndp00290]
D E2C04_04090 threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D E2C04_14030 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D E2C04_06010 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D E2C04_06015 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D E2C04_05895 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D E2C04_05840 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D E2C04_05780 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D E2C04_05900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_10125 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_17425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D E2C04_11555 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ndp00300]
D E2C04_11985 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D E2C04_16485 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D E2C04_10350 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D E2C04_04570 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D E2C04_07940 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D E2C04_02070 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D E2C04_04615 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D E2C04_11990 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D E2C04_06955 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D E2C04_06960 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ndp00310]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_15345 lhgO; L-2-hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D E2C04_09130 lysine 2,3-aminomutase K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D E2C04_09135 lysine 2,3-aminomutase K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D E2C04_09125 L-erythro-3,5-diaminohexanoate dehydrogenase K18012 kdd; L-erythro-3,5-diaminohexanoate dehydrogenase [EC:1.4.1.11]
D E2C04_02600 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247]
D E2C04_09140 3-aminobutyryl-CoA ammonia-lyase K18014 kal; 3-aminobutyryl-CoA ammonia-lyase [EC:4.3.1.14]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ndp00220]
D E2C04_07945 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D E2C04_14660 ABC transporter permease subunit K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D E2C04_16095 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D E2C04_16090 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D E2C04_16085 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D E2C04_04475 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D E2C04_10465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10655 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_07695 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D E2C04_10645 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D E2C04_04710 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D E2C04_12110 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D E2C04_17425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D E2C04_07930 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D E2C04_04530 GNAT family N-acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1]
D E2C04_07935 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D E2C04_07915 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D E2C04_07940 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:ndp00330]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_05915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D E2C04_12375 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D E2C04_15665 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D E2C04_11725 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ndp00340]
D E2C04_07810 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D E2C04_07805 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D E2C04_07095 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D E2C04_07075 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D E2C04_07070 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D E2C04_07080 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D E2C04_07065 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D E2C04_01580 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_07060 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_12230 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D E2C04_07055 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D E2C04_01850 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D E2C04_01885 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D E2C04_01965 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:ndp00350]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D E2C04_01580 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_07060 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_04880 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D E2C04_04870 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
C 00360 Phenylalanine metabolism [PATH:ndp00360]
D E2C04_09280 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D E2C04_03320 enoyl-CoA hydratase/isomerase family protein K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_03305 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D E2C04_11850 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D E2C04_01580 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_07060 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_14165 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D E2C04_05915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D E2C04_08745 non-heme iron oxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D E2C04_17155 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
C 00380 Tryptophan metabolism [PATH:ndp00380]
D E2C04_16810 tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D E2C04_16800 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_05915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D E2C04_10720 catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ndp00400]
D E2C04_06805 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D E2C04_08505 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D E2C04_08510 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D E2C04_08500 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D E2C04_12220 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D E2C04_08495 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D E2C04_01530 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D E2C04_06590 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D E2C04_10740 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D E2C04_07075 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D E2C04_07125 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D E2C04_07120 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D E2C04_12240 TrpB-like pyridoxal phosphate-dependent enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D E2C04_12290 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D E2C04_08075 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D E2C04_17010 prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D E2C04_01580 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_07060 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_09280 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ndp00410]
D E2C04_15775 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_15780 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_15875 acyl-CoA oxidase K00232 E1.3.3.6; acyl-CoA oxidase [EC:1.3.3.6]
C 00430 Taurine and hypotaurine metabolism [PATH:ndp00430]
D E2C04_16795 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D E2C04_04710 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
C 00440 Phosphonate and phosphinate metabolism
D E2C04_12260 glycerol-3-phosphate cytidylyltransferase K00968 PCYT1; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
C 00450 Selenocompound metabolism [PATH:ndp00450]
D E2C04_04080 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D E2C04_09005 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D E2C04_17410 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D E2C04_05415 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ndp00460]
D E2C04_03800 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D E2C04_10200 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ndp00470]
D E2C04_13715 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D E2C04_06970 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D E2C04_03485 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
D E2C04_11990 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D E2C04_09130 lysine 2,3-aminomutase K01844 kamD; beta-lysine 5,6-aminomutase alpha subunit [EC:5.4.3.3]
D E2C04_09135 lysine 2,3-aminomutase K18011 kamE; beta-lysine 5,6-aminomutase beta subunit [EC:5.4.3.3]
D E2C04_14165 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ndp00480]
D E2C04_14665 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D E2C04_16840 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D E2C04_05385 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D E2C04_09310 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D E2C04_00015 gnd; decarboxylating 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D E2C04_00835 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D E2C04_00940 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:ndp00515]
D E2C04_14595 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:ndp00514]
D E2C04_14595 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:ndp00542]
D E2C04_11940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ndp00541]
D E2C04_14715 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D E2C04_02870 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D E2C04_15645 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D E2C04_12910 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D E2C04_01240 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D E2C04_02850 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D E2C04_02840 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D E2C04_02835 NAD-dependent epimerase/dehydratase family protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
D E2C04_02830 cupin domain-containing protein K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D E2C04_12825 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D E2C04_12875 mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D E2C04_02860 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D E2C04_02865 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D E2C04_03815 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D E2C04_02750 NAD-dependent epimerase/dehydratase family protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D E2C04_02755 SDR family oxidoreductase K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D E2C04_02760 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
C 00550 Peptidoglycan biosynthesis [PATH:ndp00550]
D E2C04_06970 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D E2C04_12315 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K23169 murD2; UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:6.3.2.53]
D E2C04_12310 hypothetical protein K23170 murL; UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase [EC:5.1.1.23]
D E2C04_06955 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D E2C04_06960 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D E2C04_11525 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D E2C04_06965 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D E2C04_06980 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D E2C04_05540 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D E2C04_06950 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D E2C04_15855 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D E2C04_00360 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:ndp00552]
D E2C04_11940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ndp00543]
D E2C04_11940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ndp00730]
D E2C04_05610 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D E2C04_04240 FAD-dependent oxidoreductase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D E2C04_04250 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D E2C04_04235 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D E2C04_06055 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D E2C04_13875 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ndp00740]
D E2C04_07795 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D E2C04_07780 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D E2C04_07800 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D E2C04_06390 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D E2C04_03695 NADPH-dependent oxidoreductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D E2C04_08885 NADPH-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
C 00750 Vitamin B6 metabolism [PATH:ndp00750]
D E2C04_15070 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D E2C04_15095 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D E2C04_11980 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D E2C04_08350 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D E2C04_08365 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ndp00760]
D E2C04_15770 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D E2C04_15765 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D E2C04_05085 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D E2C04_12580 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D E2C04_14615 bifunctional metallophosphatase/5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D E2C04_11720 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D E2C04_12575 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D E2C04_10995 NAD(+) synthase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D E2C04_10275 CinA family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D E2C04_05075 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D E2C04_16820 NAD-dependent deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D E2C04_16875 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D E2C04_16870 pntB; Re/Si-specific NAD(P)(+) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D E2C04_09440 isochorismatase family protein K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
C 00770 Pantothenate and CoA biosynthesis [PATH:ndp00770]
D E2C04_05840 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D E2C04_05780 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D E2C04_15780 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D E2C04_13740 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D E2C04_15760 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D E2C04_06080 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D E2C04_07275 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D E2C04_13730 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D E2C04_05900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_10125 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_15775 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ndp00780]
D E2C04_11370 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D E2C04_04990 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_07645 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_08810 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_11200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_13015 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ndp00785]
D E2C04_10440 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D E2C04_10445 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D E2C04_00810 lipoate--protein ligase family protein K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_10750 pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D E2C04_11340 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D E2C04_10420 sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D E2C04_01605 pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D E2C04_01610 alpha-ketoacid dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D E2C04_09345 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ndp00790]
D E2C04_15830 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D E2C04_15820 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D E2C04_15815 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D E2C04_02895 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D E2C04_15825 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D E2C04_10375 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D E2C04_07795 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D E2C04_01535 anthranilate synthase component I family protein K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85]
D E2C04_07590 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D E2C04_09280 phenylalanine 4-monooxygenase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D E2C04_08820 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D E2C04_14705 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D E2C04_12505 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D E2C04_14710 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:ndp00670]
D E2C04_10375 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D E2C04_13455 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D E2C04_10200 glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D E2C04_13465 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D E2C04_13460 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D E2C04_02730 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D E2C04_07755 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D E2C04_09005 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D E2C04_10380 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D E2C04_14720 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ndp00860]
D E2C04_05970 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D E2C04_15600 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D E2C04_15610 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D E2C04_16245 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D E2C04_03670 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D E2C04_03705 FAD-binding protein K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D E2C04_03710 hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D E2C04_09615 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D E2C04_08705 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D E2C04_08715 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D E2C04_09645 precorrin-2 C(20)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131]
D E2C04_09640 precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D E2C04_09650 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D E2C04_11880 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D E2C04_09610 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D E2C04_09555 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D E2C04_09600 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D E2C04_10175 cobU; bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D E2C04_10170 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D E2C04_09620 VWA domain-containing protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1]
D E2C04_13165 biliverdin-producing heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20]
D E2C04_01480 TIGR03618 family F420-dependent PPOX class oxidoreductase K23825 K23825; F420H(2)-dependent biliverdin reductase [EC:1.3.98.-]
D E2C04_12395 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ndp00130]
D E2C04_15485 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D E2C04_15495 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D E2C04_15515 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D E2C04_15520 O-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D E2C04_15525 AMP-dependent synthetase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D E2C04_16790 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D E2C04_15545 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D E2C04_05245 adenosine deaminase K18286 add; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ndp00900]
D E2C04_03555 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D E2C04_14565 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D E2C04_03565 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D E2C04_06335 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D E2C04_04325 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_10830 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D E2C04_06855 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D E2C04_11030 hypothetical protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D E2C04_04125 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D E2C04_11525 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:ndp00903]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_15915 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:ndp00907]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_00975 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D E2C04_03250 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ndp00523]
D E2C04_02850 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D E2C04_02840 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D E2C04_02835 NAD-dependent epimerase/dehydratase family protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 01054 Nonribosomal peptide structures [PATH:ndp01054]
D E2C04_03485 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D E2C04_15495 isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D E2C04_02840 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ndp00946]
D E2C04_03800 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D E2C04_14725 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis
D E2C04_11725 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ndp00261]
D E2C04_16485 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D E2C04_10350 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ndp00521]
D E2C04_06755 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D E2C04_17375 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4]
D E2C04_08335 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D E2C04_02850 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D E2C04_02840 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D E2C04_02835 NAD-dependent epimerase/dehydratase family protein K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D E2C04_06755 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ndp00525]
D E2C04_02850 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D E2C04_02840 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ndp00401]
D E2C04_08075 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D E2C04_01580 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_07060 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis [PATH:ndp00405]
D E2C04_01520 phenazine-specific anthranilate synthase component I K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D E2C04_01530 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D E2C04_11355 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D E2C04_04990 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_07645 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_08810 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_11200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D E2C04_11365 acyl carrier protein K02078 acpP; acyl carrier protein
D E2C04_16770 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ndp00999]
D E2C04_07740 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D E2C04_03800 beta-glucosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ndp00362]
D E2C04_00830 alpha/beta fold hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D E2C04_03250 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D E2C04_17155 NAD(P)/FAD-dependent oxidoreductase K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D E2C04_03140 enoyl-CoA hydratase/isomerase family protein K07536 badI; 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D E2C04_03305 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D E2C04_11850 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:ndp00627]
D E2C04_05915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:ndp00625]
D E2C04_13190 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D E2C04_10530 aldehyde dehydrogenase K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D E2C04_03250 thiolase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ndp00643]
D E2C04_04880 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D E2C04_04870 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D E2C04_05915 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation [PATH:ndp00791]
D E2C04_14660 ABC transporter permease subunit K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D E2C04_16095 urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D E2C04_16090 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D E2C04_16085 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:ndp00930]
D E2C04_15915 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D E2C04_11755 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:ndp00984]
D E2C04_04030 GMC family oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D E2C04_13590 GMC family oxidoreductase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D E2C04_03060 FAD-dependent oxidoreductase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
D E2C04_03095 FAD-dependent oxidoreductase K05898 kstD; 3-oxosteroid 1-dehydrogenase [EC:1.3.99.4]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ndp03020]
D E2C04_15155 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D E2C04_07730 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D E2C04_14105 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ndp03010]
D E2C04_07270 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D E2C04_06260 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D E2C04_13950 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D E2C04_13895 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D E2C04_17305 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D E2C04_14045 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D E2C04_13910 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D E2C04_13750 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D E2C04_13985 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D E2C04_13850 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D E2C04_14050 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D E2C04_13855 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D E2C04_13915 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D E2C04_06420 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D E2C04_06190 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D E2C04_13935 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D E2C04_17295 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D E2C04_13960 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D E2C04_11660 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D E2C04_15175 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D E2C04_13965 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D E2C04_13980 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D E2C04_13975 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D E2C04_13920 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D E2C04_13905 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D E2C04_15160 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D E2C04_17290 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D E2C04_15165 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D E2C04_15180 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D E2C04_13930 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D E2C04_13885 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D E2C04_13945 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D E2C04_13835 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D E2C04_13900 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D E2C04_06215 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D E2C04_07860 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D E2C04_05590 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D E2C04_13955 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D E2C04_13970 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D E2C04_03835 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D E2C04_05595 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D E2C04_06060 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D E2C04_13940 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D E2C04_13890 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D E2C04_11960 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D E2C04_06090 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D E2C04_15240 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D E2C04_17470 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D E2C04_07855 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D E2C04_13860 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D E2C04_07965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_11400 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_13210 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_13205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D E2C04_07970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D E2C04_11395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D E2C04_07975 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D E2C04_11390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D E2C04_13200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ndp00970]
D E2C04_14685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D E2C04_11705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D E2C04_00050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D E2C04_05265 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D E2C04_12000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D E2C04_14775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D E2C04_16610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D E2C04_11440 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D E2C04_02410 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D E2C04_10135 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D E2C04_10150 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D E2C04_03775 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D E2C04_05980 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D E2C04_02405 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D E2C04_05985 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D E2C04_05990 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D E2C04_05445 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D E2C04_01800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D E2C04_10130 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D E2C04_10145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D E2C04_05220 tRNA-His K14226 tRNA-His; tRNA His
D E2C04_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D E2C04_08945 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_03980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_05155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_07155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_00145 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_05200 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D E2C04_02460 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D E2C04_05205 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D E2C04_12480 tRNA-Met K14230 tRNA-Met; tRNA Met
D E2C04_15245 tRNA-Met K14230 tRNA-Met; tRNA Met
D E2C04_12415 tRNA-Met K14230 tRNA-Met; tRNA Met
D E2C04_11430 tRNA-Met K14230 tRNA-Met; tRNA Met
D E2C04_02400 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D E2C04_08095 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D E2C04_16475 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D E2C04_05450 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D E2C04_16580 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D E2C04_16595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D E2C04_16515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D E2C04_16900 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D E2C04_15250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D E2C04_16005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D E2C04_14275 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D E2C04_15195 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D E2C04_15360 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D E2C04_10110 tRNA-Val K14237 tRNA-Val; tRNA Val
D E2C04_10140 tRNA-Val K14237 tRNA-Val; tRNA Val
D E2C04_11320 tRNA-Val K14237 tRNA-Val; tRNA Val
D E2C04_10155 tRNA-Val K14237 tRNA-Val; tRNA Val
D E2C04_05970 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D E2C04_05720 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D E2C04_05725 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D E2C04_05715 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D E2C04_08470 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D E2C04_11495 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D E2C04_08325 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D E2C04_16995 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D E2C04_03580 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D E2C04_05415 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D E2C04_02730 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D E2C04_07755 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D E2C04_11695 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D E2C04_04590 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D E2C04_08420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D E2C04_07905 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D E2C04_11405 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ndp03060]
D E2C04_13880 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D E2C04_15190 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D E2C04_08665 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D E2C04_08395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D E2C04_17455 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D E2C04_12755 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D E2C04_16510 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D E2C04_06120 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D E2C04_06745 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D E2C04_09085 Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D E2C04_12730 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D E2C04_09090 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D E2C04_06220 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D E2C04_00645 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D E2C04_07030 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ndp04122]
D E2C04_05610 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D E2C04_02665 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D E2C04_12505 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D E2C04_08820 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D E2C04_02640 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D E2C04_05110 MoaD/ThiS family protein K03636 moaD; sulfur-carrier protein
D E2C04_14705 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D E2C04_04245 thiS; sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D E2C04_05115 pyridoxal-phosphate dependent enzyme K21148 cysM; [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase [EC:2.5.1.113]
C 03050 Proteasome [PATH:ndp03050]
D E2C04_09040 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D E2C04_09060 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D E2C04_09055 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 03018 RNA degradation [PATH:ndp03018]
D E2C04_05585 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D E2C04_03940 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D E2C04_06425 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D E2C04_01205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D E2C04_00920 DEAD/DEAH box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D E2C04_11970 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D E2C04_10345 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D E2C04_02010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D E2C04_14175 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D E2C04_02590 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D E2C04_17380 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ndp03030]
D E2C04_06645 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D E2C04_16505 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D E2C04_11675 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D E2C04_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D E2C04_15170 helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D E2C04_11450 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D E2C04_00510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_05345 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_10050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_03495 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D E2C04_06225 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D E2C04_05705 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ndp03410]
D E2C04_16350 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D E2C04_14255 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D E2C04_15735 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D E2C04_01035 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D E2C04_06100 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D E2C04_10265 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D E2C04_05435 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D E2C04_05995 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D E2C04_15280 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D E2C04_03595 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D E2C04_03960 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D E2C04_17315 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D E2C04_05705 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ndp03420]
D E2C04_10555 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D E2C04_08630 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D E2C04_09705 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D E2C04_13495 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D E2C04_05705 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D E2C04_14105 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
C 03430 Mismatch repair [PATH:ndp03430]
D E2C04_09705 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D E2C04_13495 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D E2C04_04310 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D E2C04_00510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_05345 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_10050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D E2C04_16505 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D E2C04_11675 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D E2C04_06645 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D E2C04_05705 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ndp03440]
D E2C04_00510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_05345 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_10050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D E2C04_11540 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D E2C04_16495 recR; recombination protein RecR K06187 recR; recombination protein RecR
D E2C04_10240 recA; recombinase RecA K03553 recA; recombination protein RecA
D E2C04_08385 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D E2C04_08390 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D E2C04_06070 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D E2C04_16730 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D E2C04_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D E2C04_16505 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D E2C04_11675 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D E2C04_06645 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D E2C04_07745 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining [PATH:ndp03450]
D E2C04_04715 Ku protein K10979 ku; DNA end-binding protein Ku
D E2C04_04720 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ndp03250]
D E2C04_00085 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ndp02010]
D E2C04_15390 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D E2C04_15380 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D E2C04_17140 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D E2C04_17150 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D E2C04_13050 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D E2C04_13055 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D E2C04_13060 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D E2C04_15910 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D E2C04_15905 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D E2C04_15900 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D E2C04_14650 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D E2C04_03780 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D E2C04_04265 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D E2C04_04280 extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D E2C04_04275 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D E2C04_04270 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D E2C04_03785 extracellular solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D E2C04_03795 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D E2C04_13255 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D E2C04_13265 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D E2C04_13270 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D E2C04_13575 hypothetical protein K10543 xylF; D-xylose transport system substrate-binding protein
D E2C04_02360 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D E2C04_02555 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D E2C04_02350 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D E2C04_02560 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D E2C04_02355 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D E2C04_02565 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D E2C04_02380 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D E2C04_02570 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D E2C04_14535 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D E2C04_14545 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D E2C04_14530 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D E2C04_07185 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_03100 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_05825 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_03105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D E2C04_07165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D E2C04_03110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D E2C04_07170 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D E2C04_07175 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D E2C04_03115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D E2C04_03120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D E2C04_10885 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D E2C04_10875 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein
D E2C04_10880 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D E2C04_16060 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D E2C04_16065 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D E2C04_16075 ATP-binding cassette domain-containing protein K11962 urtD; urea transport system ATP-binding protein
D E2C04_16080 ATP-binding cassette domain-containing protein K11963 urtE; urea transport system ATP-binding protein
D E2C04_11505 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D E2C04_05930 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D E2C04_05920 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D E2C04_05925 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D E2C04_09670 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D E2C04_09675 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D E2C04_04920 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D E2C04_04915 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D E2C04_15065 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D E2C04_10340 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
C 02060 Phosphotransferase system (PTS) [PATH:ndp02060]
D E2C04_06415 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D E2C04_06395 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
C 03070 Bacterial secretion system [PATH:ndp03070]
D E2C04_15190 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D E2C04_08665 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D E2C04_13880 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D E2C04_08395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D E2C04_17455 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D E2C04_12755 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D E2C04_06120 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D E2C04_09085 Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D E2C04_12730 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D E2C04_09090 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ndp02020]
D E2C04_02685 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D E2C04_03525 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D E2C04_03520 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D E2C04_02360 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D E2C04_02555 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D E2C04_14885 flagellin K02406 fliC; flagellin
D E2C04_14880 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D E2C04_14995 motility protein A K02556 motA; chemotaxis protein MotA
D E2C04_05275 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D E2C04_05270 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D E2C04_08715 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D E2C04_01540 HAMP domain-containing histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D E2C04_04670 PDZ domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D E2C04_12795 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D E2C04_12800 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D E2C04_00755 hypothetical protein K02313 dnaA; chromosomal replication initiator protein
D E2C04_00360 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D E2C04_01895 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D E2C04_03150 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D E2C04_08145 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D E2C04_12125 NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D E2C04_04740 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D E2C04_14145 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D E2C04_14135 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D E2C04_14140 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D E2C04_14855 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D E2C04_15320 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D E2C04_15315 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D E2C04_08215 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D E2C04_08220 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D E2C04_14815 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D E2C04_06685 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D E2C04_06690 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D E2C04_06730 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D E2C04_06725 MinD/ParA family protein K02282 cpaE; pilus assembly protein CpaE
D E2C04_00175 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_04750 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_06715 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_09865 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_13330 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_16180 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_04755 type II secretion system protein F K12510 tadB; tight adherence protein B
D E2C04_06710 type II secretion system F family protein K12510 tadB; tight adherence protein B
D E2C04_16175 hypothetical protein K12510 tadB; tight adherence protein B
D E2C04_04815 pilus assembly protein TadB K12511 tadC; tight adherence protein C
D E2C04_06705 type II secretion system F family protein K12511 tadC; tight adherence protein C
D E2C04_13320 hypothetical protein K12511 tadC; tight adherence protein C
D E2C04_06155 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D E2C04_06150 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1
D E2C04_10465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10655 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_14820 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D E2C04_03810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14845 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D E2C04_14850 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D E2C04_14905 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D E2C04_14915 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D E2C04_14825 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D E2C04_16355 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D E2C04_10330 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D E2C04_01555 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D E2C04_14270 hypothetical protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ndp02024]
D E2C04_01530 aminodeoxychorismate/anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D E2C04_06805 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D E2C04_01520 phenazine-specific anthranilate synthase component I K13063 phzE; 2-amino-4-deoxychorismate synthase [EC:2.6.1.86]
D E2C04_14655 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D E2C04_07185 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_03100 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_05825 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_03105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D E2C04_07165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D E2C04_03110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D E2C04_07170 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D E2C04_07175 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D E2C04_03115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D E2C04_03120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D E2C04_02575 hypothetical protein K20276 bapA; large repetitive protein
D E2C04_11645 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_12270 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_15630 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_17250 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_16355 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D E2C04_07780 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D E2C04_08435 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D E2C04_03345 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D E2C04_08440 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D E2C04_08430 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D E2C04_03335 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D E2C04_08445 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D E2C04_17455 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D E2C04_15190 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D E2C04_08665 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D E2C04_13880 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D E2C04_08395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D E2C04_12755 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D E2C04_06120 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ndp02030]
D E2C04_03810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14850 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D E2C04_14845 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D E2C04_14905 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D E2C04_14915 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D E2C04_14910 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D E2C04_14825 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D E2C04_14820 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D E2C04_14950 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D E2C04_15015 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D E2C04_14995 motility protein A K02556 motA; chemotaxis protein MotA
D E2C04_15000 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ndp02040]
D E2C04_14935 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D E2C04_14940 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D E2C04_14950 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D E2C04_14955 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D E2C04_14965 hypothetical protein K02413 fliJ; flagellar protein FliJ
D E2C04_14975 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D E2C04_00370 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D E2C04_15005 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D E2C04_15015 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D E2C04_15020 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D E2C04_15025 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D E2C04_15030 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D E2C04_15035 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR
D E2C04_15040 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D E2C04_14925 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D E2C04_14930 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D E2C04_14870 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D E2C04_14865 flagellar hook protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D E2C04_14885 flagellin K02406 fliC; flagellin
D E2C04_14890 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D E2C04_14895 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D E2C04_14995 motility protein A K02556 motA; chemotaxis protein MotA
D E2C04_15000 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D E2C04_07280 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D E2C04_14880 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D E2C04_03940 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ndp04980]
D E2C04_11880 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D E2C04_11805 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D E2C04_09005 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ndp01501]
D E2C04_00675 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_00280 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_10315 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_05540 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D E2C04_06950 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ndp01502]
D E2C04_13715 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D E2C04_06960 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D E2C04_06965 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D E2C04_06980 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D E2C04_00360 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D E2C04_00085 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ndp01000]
C 01001 Protein kinases [BR:ndp01001]
D E2C04_06300 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D E2C04_00110 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D E2C04_00115 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D E2C04_11410 serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D E2C04_01130 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D E2C04_01135 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D E2C04_12050 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D E2C04_12140 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D E2C04_04495 hypothetical protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D E2C04_02685 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D E2C04_03525 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D E2C04_01540 HAMP domain-containing histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D E2C04_12795 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D E2C04_15320 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D E2C04_08215 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D E2C04_16205 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D E2C04_14850 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D E2C04_12160 ATPase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ndp01009]
D E2C04_00130 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D E2C04_08850 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ndp01002]
D E2C04_00645 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D E2C04_07030 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D E2C04_08490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D E2C04_13585 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D E2C04_06675 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D E2C04_15890 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D E2C04_02320 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D E2C04_07140 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D E2C04_13735 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D E2C04_04195 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D E2C04_10525 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124]
D E2C04_02370 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D E2C04_01275 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D E2C04_05975 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein
D E2C04_05385 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D E2C04_09310 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D E2C04_10300 hypothetical protein K01400 nprE; bacillolysin [EC:3.4.24.28]
D E2C04_10305 hypothetical protein K01400 nprE; bacillolysin [EC:3.4.24.28]
D E2C04_17015 M4 family peptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D E2C04_00910 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D E2C04_00360 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D E2C04_04615 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D E2C04_01915 M20/M25/M40 family metallo-hydrolase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D E2C04_13870 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D E2C04_05325 aminopeptidase P family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D E2C04_15835 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D E2C04_00675 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_00280 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_10315 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_14385 hypothetical protein K06336 tasA; spore coat-associated protein N
D E2C04_05330 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-]
D E2C04_04670 PDZ domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D E2C04_07285 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D E2C04_15855 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D E2C04_05460 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D E2C04_05465 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D E2C04_12495 PDZ domain-containing protein K07177 K07177; Lon-like protease
D E2C04_14465 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D E2C04_06220 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D E2C04_14725 penicillin acylase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D E2C04_09060 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D E2C04_09055 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
C 01003 Glycosyltransferases [BR:ndp01003]
D E2C04_09150 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D E2C04_14595 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D E2C04_11415 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-]
D E2C04_11940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D E2C04_07225 DUF3367 domain-containing protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D E2C04_07230 discoidin domain-containing protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
D E2C04_12915 glycosyltransferase K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287]
D E2C04_02890 glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ndp01005]
D E2C04_11940 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ndp01011]
D E2C04_06970 hypothetical protein K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D E2C04_06955 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D E2C04_13715 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D E2C04_06965 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D E2C04_06980 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D E2C04_17390 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D E2C04_05540 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D E2C04_06950 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D E2C04_15855 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D E2C04_00360 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D E2C04_06675 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D E2C04_15890 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D E2C04_02370 sortase K07284 srtA; sortase A [EC:3.4.22.70]
D E2C04_08480 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D E2C04_13090 SpoIID/LytB domain-containing protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:ndp01004]
D E2C04_11355 acyltransferase domain-containing protein K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D E2C04_11360 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D E2C04_11370 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D E2C04_04990 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_07645 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_08810 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_11200 SDR family oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D E2C04_07630 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D E2C04_16280 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D E2C04_06310 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D E2C04_11645 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_12270 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_15630 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_17250 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_04180 acyl-CoA synthetase K12429 fadD36; fatty acid CoA ligase FadD36
D E2C04_06770 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D E2C04_08085 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ndp01008]
D E2C04_03485 amino acid racemase K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:ndp01006]
D E2C04_06855 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D E2C04_11030 hypothetical protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D E2C04_04125 isoprenyl transferase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D E2C04_11525 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D E2C04_14495 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D E2C04_15545 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D E2C04_08705 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ndp01007]
D E2C04_05970 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D E2C04_11405 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D E2C04_03580 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D E2C04_05415 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D E2C04_04590 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D E2C04_11695 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D E2C04_08420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D E2C04_11495 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D E2C04_16995 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D E2C04_08325 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D E2C04_08470 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D E2C04_07905 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D E2C04_15200 pyridoxal phosphate-dependent aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D E2C04_17425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D E2C04_02070 pyridoxal phosphate-dependent aminotransferase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D E2C04_01580 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_07060 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D E2C04_12375 rocD; ornithine--oxo-acid transaminase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D E2C04_07940 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D E2C04_05900 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_10125 4-amino-4-deoxychorismate lyase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D E2C04_15095 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:ndp00199]
D E2C04_00610 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:ndp00194]
D E2C04_11890 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D E2C04_11895 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D E2C04_11900 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D E2C04_11905 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D E2C04_11910 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D E2C04_11915 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D E2C04_11920 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ndp03000]
D E2C04_05995 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D E2C04_05055 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D E2C04_06410 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D E2C04_14110 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D E2C04_03275 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D E2C04_05510 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D E2C04_05935 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D E2C04_10755 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D E2C04_02025 MerR family transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D E2C04_03350 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D E2C04_11045 MerR family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D E2C04_02620 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D E2C04_11520 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D E2C04_08310 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D E2C04_12465 transcriptional repressor K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D E2C04_16355 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D E2C04_17095 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D E2C04_04415 ArsR family transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D E2C04_00240 ArsR family transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D E2C04_00270 ArsR family transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D E2C04_00635 ArsR family transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D E2C04_09225 ArsR family transcriptional regulator K21885 cmtR; ArsR family transcriptional regulator, cadmium/lead-responsive transcriptional repressor
D E2C04_10270 XRE family transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D E2C04_13665 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D E2C04_14795 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D E2C04_13015 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D E2C04_15620 redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D E2C04_12155 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D E2C04_12855 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D E2C04_16450 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D E2C04_16630 hypothetical protein K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D E2C04_12545 WhiB family transcriptional regulator K18958 whiB7; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D E2C04_02520 metal-sensitive transcriptional regulator K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D E2C04_00500 nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E2C04_09925 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E2C04_17435 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E2C04_14620 hypothetical protein K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D E2C04_07950 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D E2C04_11620 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D E2C04_03970 amino acid-binding protein K03567 gcvR; glycine cleavage system transcriptional repressor
D E2C04_04635 PaaX family transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D E2C04_16300 PspC domain-containing protein K03973 pspC; phage shock protein C
D E2C04_07660 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D E2C04_05010 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator
D E2C04_07025 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D E2C04_09460 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D E2C04_14445 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D E2C04_06935 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ndp03021]
D E2C04_14105 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D E2C04_15155 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D E2C04_07730 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D E2C04_07280 sigma-70 family RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor
D E2C04_01440 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D E2C04_01455 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D E2C04_12185 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D E2C04_17170 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D E2C04_17400 sigM; RNA polymerase sigma factor SigM K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D E2C04_10685 sigma-70 family RNA polymerase sigma factor K03090 sigB; RNA polymerase sigma-B factor
D E2C04_12145 RNA polymerase sigma factor SigF K03090 sigB; RNA polymerase sigma-B factor
D E2C04_14880 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D E2C04_06360 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D E2C04_08520 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D E2C04_15185 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D E2C04_16320 serine/threonine-protein phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D E2C04_12045 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D E2C04_16140 anti-sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D E2C04_12050 ATP-binding protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D E2C04_12140 anti-sigma factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D E2C04_07025 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D E2C04_09460 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D E2C04_04095 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D E2C04_11970 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ndp03019]
D E2C04_05585 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D E2C04_06095 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D E2C04_10345 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D E2C04_06845 hypothetical protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D E2C04_05225 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D E2C04_01205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D E2C04_00920 DEAD/DEAH box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D E2C04_03940 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D E2C04_06425 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D E2C04_11970 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D E2C04_02010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D E2C04_14175 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D E2C04_02590 RNA degradosome polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D E2C04_17380 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D E2C04_14855 csrA; carbon storage regulator CsrA K03563 csrA; carbon storage regulator
D E2C04_09105 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D E2C04_11125 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ndp03011]
D E2C04_07270 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D E2C04_06260 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D E2C04_13950 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D E2C04_13895 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D E2C04_17305 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D E2C04_14045 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D E2C04_13910 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D E2C04_13750 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D E2C04_13985 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D E2C04_13850 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D E2C04_14050 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D E2C04_13855 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D E2C04_13915 type Z 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D E2C04_06420 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D E2C04_06190 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D E2C04_13935 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D E2C04_17295 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D E2C04_13960 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D E2C04_11660 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D E2C04_15175 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D E2C04_13965 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D E2C04_13980 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D E2C04_13975 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D E2C04_13920 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D E2C04_13905 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D E2C04_17290 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D E2C04_15165 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D E2C04_15180 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D E2C04_15160 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D E2C04_13930 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D E2C04_13885 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D E2C04_13945 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D E2C04_13835 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D E2C04_13900 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D E2C04_06215 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D E2C04_07860 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D E2C04_05590 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D E2C04_13955 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D E2C04_13970 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D E2C04_05595 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D E2C04_06060 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D E2C04_13940 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D E2C04_13890 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D E2C04_11960 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D E2C04_06090 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D E2C04_15240 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D E2C04_17470 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D E2C04_07855 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D E2C04_13860 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D E2C04_03835 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D E2C04_07975 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D E2C04_11390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D E2C04_13200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D E2C04_07965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_11400 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_13210 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_13205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D E2C04_07970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D E2C04_11395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ndp03009]
D E2C04_06095 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D E2C04_06300 serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D E2C04_05225 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D E2C04_11570 GTPase Era K03595 era; GTPase
D E2C04_05600 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D E2C04_07025 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D E2C04_09460 TraR/DksA family transcriptional regulator K06204 dksA; RNA polymerase-binding transcription factor
D E2C04_06360 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D E2C04_08520 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D E2C04_15185 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D E2C04_14570 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D E2C04_07765 rRNA cytosine-C5-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D E2C04_13805 methyltransferase domain-containing protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D E2C04_06075 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D E2C04_11610 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D E2C04_17445 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D E2C04_14590 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D E2C04_06290 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D E2C04_13695 rimI; ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D E2C04_14695 N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D E2C04_10285 rimO; 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D E2C04_05585 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12]
D E2C04_08475 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D E2C04_01205 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D E2C04_08090 ribosome biogenesis GTPase Der K03977 engA; GTPase
D E2C04_11945 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D E2C04_06380 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A
D E2C04_06355 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D E2C04_12250 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein
D E2C04_11715 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D E2C04_11590 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D E2C04_04375 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D E2C04_06085 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ndp03016]
D E2C04_06845 hypothetical protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D E2C04_05970 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D E2C04_04590 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D E2C04_11695 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D E2C04_05415 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D E2C04_08470 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D E2C04_11495 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D E2C04_08325 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D E2C04_16995 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D E2C04_03580 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D E2C04_08420 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D E2C04_07905 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D E2C04_11405 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D E2C04_02595 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D E2C04_11600 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D E2C04_09035 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D E2C04_14025 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D E2C04_06385 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D E2C04_05610 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D E2C04_11945 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D E2C04_14495 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D E2C04_03915 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D E2C04_17465 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D E2C04_11050 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D E2C04_05140 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D E2C04_16860 thpR; RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D E2C04_16395 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D E2C04_16890 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D E2C04_06210 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D E2C04_07865 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D E2C04_02625 folate-binding protein K06980 ygfZ; tRNA-modifying protein YgfZ
D E2C04_15845 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D E2C04_13700 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D E2C04_13705 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D E2C04_06425 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ndp03012]
D E2C04_07850 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D E2C04_06265 elongation factor Ts K02357 tsf; elongation factor Ts
D E2C04_14035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D E2C04_14040 fusA; elongation factor G K02355 fusA; elongation factor G
D E2C04_11955 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D E2C04_04320 putative protein N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D E2C04_11950 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D E2C04_03840 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D E2C04_13865 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D E2C04_08515 efp; elongation factor P K02356 efp; elongation factor P
D E2C04_04910 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D E2C04_10660 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D E2C04_11215 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ndp03110]
D E2C04_02055 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D E2C04_05470 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D E2C04_02010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D E2C04_14175 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D E2C04_02020 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D E2C04_02015 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D E2C04_11185 Hsp20 family protein K13993 HSP20; HSP20 family protein
D E2C04_05180 co-chaperone GroES K04078 groES; chaperonin GroES
D E2C04_15835 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D E2C04_12940 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A
D E2C04_00085 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D E2C04_09290 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D E2C04_08600 trxA; thioredoxin K03671 TXN; thioredoxin
D E2C04_17415 trxA; thioredoxin K03671 TXN; thioredoxin
D E2C04_11775 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin
D E2C04_16345 TlpA family protein disulfide reductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ndp04131]
D E2C04_05520 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D E2C04_01105 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D E2C04_06745 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D E2C04_08650 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D E2C04_07150 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:ndp04121]
D E2C04_09050 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:ndp03051]
D E2C04_09060 prcA; proteasome subunit alpha K03432 psmA; proteasome alpha subunit [EC:3.4.25.1]
D E2C04_09055 prcB; proteasome subunit beta K03433 psmB; proteasome beta subunit [EC:3.4.25.1]
D E2C04_09040 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase
D E2C04_09065 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D E2C04_09080 WYL domain-containing protein K13573 pafC; proteasome accessory factor C
C 03032 DNA replication proteins [BR:ndp03032]
D E2C04_03495 ribonuclease HI family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D E2C04_00755 hypothetical protein K02313 dnaA; chromosomal replication initiator protein
D E2C04_15170 helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D E2C04_11450 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D E2C04_00510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_05345 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_10050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D E2C04_11675 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D E2C04_06645 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D E2C04_16505 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D E2C04_06225 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D E2C04_05705 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D E2C04_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D E2C04_07365 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D E2C04_10775 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D E2C04_16045 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ndp03036]
D E2C04_06095 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D E2C04_15750 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2
D E2C04_00755 hypothetical protein K02313 dnaA; chromosomal replication initiator protein
D E2C04_08190 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein
D E2C04_05055 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D E2C04_10755 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D E2C04_08060 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D E2C04_08065 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D E2C04_04915 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D E2C04_06950 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D E2C04_10295 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D E2C04_13350 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D E2C04_16635 hypothetical protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D E2C04_06990 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ
D E2C04_06975 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D E2C04_04920 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D E2C04_06995 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D E2C04_07010 DUF552 domain-containing protein K09772 sepF; cell division inhibitor SepF
D E2C04_05535 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D E2C04_05545 rodA; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D E2C04_08050 ParA family protein K03496 parA; chromosome partitioning protein
D E2C04_12645 ParA family protein K03496 parA; chromosome partitioning protein
D E2C04_17440 ParA family protein K03496 parA; chromosome partitioning protein
D E2C04_00500 nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E2C04_09925 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E2C04_17435 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E2C04_17445 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D E2C04_06250 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D E2C04_08040 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D E2C04_08645 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:ndp03400]
D E2C04_06000 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D E2C04_14255 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D E2C04_15735 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D E2C04_16350 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D E2C04_14105 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
D E2C04_07580 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D E2C04_10365 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D E2C04_14505 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D E2C04_15125 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D E2C04_07490 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D E2C04_03595 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
D E2C04_03960 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D E2C04_05995 DNA-3-methyladenine glycosylase 2 family protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D E2C04_15280 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D E2C04_01035 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D E2C04_06100 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D E2C04_10265 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D E2C04_05435 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D E2C04_17315 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D E2C04_05705 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D E2C04_10555 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D E2C04_08630 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D E2C04_09705 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D E2C04_13495 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D E2C04_15155 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D E2C04_07730 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D E2C04_04310 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D E2C04_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D E2C04_11675 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D E2C04_06645 DEDD exonuclease domain-containing protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D E2C04_16505 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D E2C04_00510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_05345 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_10050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_16730 recC; exodeoxyribonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D E2C04_10240 recA; recombinase RecA K03553 recA; recombination protein RecA
D E2C04_08385 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D E2C04_08390 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D E2C04_07745 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D E2C04_08290 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D E2C04_08280 exonuclease SbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D E2C04_15720 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D E2C04_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF
D E2C04_06070 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D E2C04_11540 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D E2C04_16495 recR; recombination protein RecR K06187 recR; recombination protein RecR
D E2C04_08010 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D E2C04_16545 DUF853 family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D E2C04_04715 Ku protein K10979 ku; DNA end-binding protein Ku
D E2C04_04720 DNA ligase K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D E2C04_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D E2C04_07365 type IIA DNA topoisomerase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D E2C04_10775 DNA topoisomerase IB K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D E2C04_16045 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D E2C04_00920 DEAD/DEAH box helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D E2C04_00815 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D E2C04_07305 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D E2C04_14465 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D E2C04_10235 regulatory protein RecX K03565 recX; regulatory protein
D E2C04_14470 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D E2C04_09780 DEAD/DEAH box helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D E2C04_10260 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D E2C04_02550 NUDIX domain-containing protein K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
C 03029 Mitochondrial biogenesis [BR:ndp03029]
D E2C04_07850 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D E2C04_06265 elongation factor Ts K02357 tsf; elongation factor Ts
D E2C04_14035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D E2C04_14040 fusA; elongation factor G K02355 fusA; elongation factor G
D E2C04_11570 GTPase Era K03595 era; GTPase
D E2C04_11405 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D E2C04_11695 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D E2C04_11495 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D E2C04_05720 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D E2C04_05725 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D E2C04_05715 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D E2C04_00510 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_05345 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_10050 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D E2C04_02010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D E2C04_02015 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D E2C04_14175 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D E2C04_05180 co-chaperone GroES K04078 groES; chaperonin GroES
D E2C04_02020 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D E2C04_05610 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D E2C04_08705 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D E2C04_08715 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D E2C04_17455 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D E2C04_07130 SCO family protein K07152 SCO1; protein SCO1
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ndp02000]
D E2C04_15065 ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D E2C04_07085 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D E2C04_07090 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D E2C04_08805 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D E2C04_10340 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D E2C04_15390 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D E2C04_15380 sulfate ABC transporter permease subunit K02047 cysW; sulfate/thiosulfate transport system permease protein
D E2C04_17140 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D E2C04_17150 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D E2C04_13050 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D E2C04_13055 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D E2C04_13060 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D E2C04_15910 thiamine ABC transporter substrate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D E2C04_15905 iron ABC transporter permease K02063 thiP; thiamine transport system permease protein
D E2C04_15900 ABC transporter ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D E2C04_14650 ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D E2C04_14655 hypothetical protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D E2C04_01645 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D E2C04_01640 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D E2C04_03780 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D E2C04_04265 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D E2C04_04280 extracellular solute-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein
D E2C04_04275 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein
D E2C04_04270 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein
D E2C04_03785 extracellular solute-binding protein K10240 cebE; cellobiose transport system substrate-binding protein
D E2C04_03795 carbohydrate ABC transporter permease K10242 cebG; cellobiose transport system permease protein
D E2C04_13575 hypothetical protein K10543 xylF; D-xylose transport system substrate-binding protein
D E2C04_13255 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D E2C04_13265 ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D E2C04_13270 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D E2C04_03655 extracellular solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D E2C04_02360 phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D E2C04_02555 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D E2C04_02350 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D E2C04_02560 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D E2C04_02355 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D E2C04_02565 pstA; phosphate ABC transporter permease PstA K02038 pstA; phosphate transport system permease protein
D E2C04_02380 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D E2C04_02570 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D E2C04_14535 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein
D E2C04_14545 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein
D E2C04_14530 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1]
D E2C04_07185 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_03100 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_05825 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D E2C04_03105 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D E2C04_07165 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D E2C04_03110 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D E2C04_07170 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D E2C04_07175 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D E2C04_03115 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D E2C04_03120 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D E2C04_10885 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D E2C04_10875 ABC transporter permease subunit K02072 metI; D-methionine transport system permease protein
D E2C04_10880 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D E2C04_16060 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D E2C04_16065 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein
D E2C04_16075 ATP-binding cassette domain-containing protein K11962 urtD; urea transport system ATP-binding protein
D E2C04_16080 ATP-binding cassette domain-containing protein K11963 urtE; urea transport system ATP-binding protein
D E2C04_01350 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D E2C04_05065 transporter substrate-binding domain-containing protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D E2C04_01355 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D E2C04_05060 amino acid ABC transporter permease/ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D E2C04_01360 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D E2C04_08435 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D E2C04_03345 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D E2C04_08440 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D E2C04_08430 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D E2C04_03335 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D E2C04_08445 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D E2C04_13160 hemin receptor K25132 hmuT; heme transport system substrate-binding protein
D E2C04_13150 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D E2C04_04560 siderophore ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D E2C04_04555 ABC transporter permease K25284 yclN; iron-siderophore transport system permease protein
D E2C04_04545 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D E2C04_02915 putative F420-0 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D E2C04_09575 iron ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D E2C04_02920 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D E2C04_09580 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D E2C04_02925 ATP-binding cassette domain-containing protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D E2C04_08855 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D E2C04_09585 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D E2C04_11505 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D E2C04_05930 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component
D E2C04_05920 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein
D E2C04_05925 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-]
D E2C04_05745 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D E2C04_09670 ABC transporter permease K09813 hrtB; hemin transport system permease protein
D E2C04_09675 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D E2C04_14325 ABC transporter permease K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D E2C04_14330 ABC transporter permease K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D E2C04_14335 ABC transporter ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D E2C04_02545 anibiotic ABC transporter K25149 narB; polyether ionophore transport system permease protein
D E2C04_17195 multidrug ABC transporter permease K25149 narB; polyether ionophore transport system permease protein
D E2C04_04920 ABC transporter permease K09811 ftsX; cell division transport system permease protein
D E2C04_04915 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D E2C04_02275 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_05135 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_05165 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_05855 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_08720 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_12900 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_13515 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_13525 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_15325 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D E2C04_01335 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_01670 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_02280 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_05130 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_05160 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_05765 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_12895 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_13510 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_13520 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_15330 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_15945 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D E2C04_01180 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D E2C04_01300 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D E2C04_01295 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D E2C04_14120 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D E2C04_08750 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D E2C04_03015 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D E2C04_14155 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D E2C04_14160 NarK/NasA family nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D E2C04_15295 MFS transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D E2C04_13420 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D E2C04_01595 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D E2C04_07380 MFS transporter K27247 K27247; MFS transporter, DHA2 family, triacylglyceride efflux pump
D E2C04_06415 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D E2C04_06395 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D E2C04_13435 aquaporin Z K06188 aqpZ; aquaporin Z
D E2C04_10180 Ion channel protein K10716 kch; voltage-gated potassium channel
D E2C04_06145 ammonium transporter K03320 amt; ammonium transporter, Amt family
D E2C04_14740 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel
D E2C04_04960 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D E2C04_05370 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D E2C04_14995 motility protein A K02556 motA; chemotaxis protein MotA
D E2C04_15000 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D E2C04_08970 hypothetical protein K03284 corA; magnesium transporter
D E2C04_11465 CrcB family protein K06199 crcB; fluoride exporter
D E2C04_11470 CrcB family protein K06199 crcB; fluoride exporter
D E2C04_09370 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D E2C04_12950 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D E2C04_05195 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D E2C04_01600 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D E2C04_15975 multidrug efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D E2C04_15405 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D E2C04_05260 YnfA family protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D E2C04_14290 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D E2C04_05550 ionic transporter y4hA K07300 chaA; Ca2+:H+ antiporter
D E2C04_10590 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter
D E2C04_10580 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D E2C04_16325 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D E2C04_15885 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein
D E2C04_07510 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D E2C04_07515 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D E2C04_15880 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D E2C04_10950 benE; benzoate/H(+) symporter BenE family transporter K05782 benE; benzoate membrane transport protein
D E2C04_06745 ArsA family ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D E2C04_01920 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D E2C04_01925 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D E2C04_01935 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D E2C04_01940 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D E2C04_01945 monovalent cation/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D E2C04_17390 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D E2C04_05050 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D E2C04_09285 leuE; leucine efflux protein LeuE K11250 leuE; leucine efflux protein
D E2C04_06455 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump
D E2C04_05275 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D E2C04_05270 tripartite tricarboxylate transporter substrate binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D E2C04_04085 AI-2E family transporter K20469 K20469; putative heme transporter
D E2C04_16855 VIT family protein K22736 VIT; vacuolar iron transporter family protein
D E2C04_06975 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D E2C04_01105 TMEM165/GDT1 family protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D E2C04_10850 cobalt transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D E2C04_16135 sodium-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D E2C04_00260 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D E2C04_00665 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D E2C04_15580 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D E2C04_14145 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D E2C04_14135 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D E2C04_04495 hypothetical protein K25588 K25588; tyrosine-protein kinase [EC:2.7.10.3]
D E2C04_07790 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D E2C04_00290 hypothetical protein K07156 copC; copper resistance protein C
D E2C04_00700 copper resistance protein CopC K07156 copC; copper resistance protein C
D E2C04_02045 copper resistance protein CopC K07156 copC; copper resistance protein C
C 02044 Secretion system [BR:ndp02044]
D E2C04_08490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D E2C04_06730 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D E2C04_06725 MinD/ParA family protein K02282 cpaE; pilus assembly protein CpaE
D E2C04_00175 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_04750 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_06715 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_09865 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_13330 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_16180 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_04755 type II secretion system protein F K12510 tadB; tight adherence protein B
D E2C04_06710 type II secretion system F family protein K12510 tadB; tight adherence protein B
D E2C04_16175 hypothetical protein K12510 tadB; tight adherence protein B
D E2C04_04815 pilus assembly protein TadB K12511 tadC; tight adherence protein C
D E2C04_06705 type II secretion system F family protein K12511 tadC; tight adherence protein C
D E2C04_13320 hypothetical protein K12511 tadC; tight adherence protein C
D E2C04_06685 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D E2C04_06690 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D E2C04_07015 YggT family protein K02221 yggT; YggT family protein
D E2C04_11685 ComEA family DNA-binding protein K02237 comEA; competence protein ComEA
D E2C04_11680 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC
D E2C04_15040 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D E2C04_14940 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D E2C04_14955 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D E2C04_15015 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D E2C04_15020 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D E2C04_15025 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D E2C04_15030 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D E2C04_15035 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR
D E2C04_16540 eccCa; type VII secretion protein EccCa K27086 eccC; ESX secretion system protein EccC
D E2C04_16525 hypothetical protein K27087 eccD; ESX secretion system protein EccD
D E2C04_16530 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein
D E2C04_16535 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein
D E2C04_12755 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D E2C04_15190 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D E2C04_08665 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D E2C04_13880 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D E2C04_06120 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D E2C04_08395 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D E2C04_17455 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D E2C04_09085 Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D E2C04_12730 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D E2C04_09090 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ndp02042]
D E2C04_09370 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D E2C04_12950 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D E2C04_04120 hemolysin III family protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ndp02022]
D E2C04_02685 HAMP domain-containing histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D E2C04_03525 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D E2C04_03520 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3
D E2C04_01540 HAMP domain-containing histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3]
D E2C04_12795 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D E2C04_12800 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D E2C04_04740 response regulator transcription factor K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D E2C04_15320 hypothetical protein K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D E2C04_15315 response regulator transcription factor K07693 desR; two-component system, NarL family, response regulator DesR
D E2C04_08215 GAF domain-containing protein K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D E2C04_08220 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D E2C04_14815 response regulator transcription factor K07695 devR; two-component system, NarL family, response regulator DevR
D E2C04_16205 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D E2C04_14850 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D E2C04_14905 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D E2C04_14915 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D E2C04_14825 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D E2C04_12160 ATPase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D E2C04_07160 response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:ndp02035]
D E2C04_14850 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D E2C04_14845 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D E2C04_14910 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D E2C04_14820 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D E2C04_14825 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D E2C04_14905 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D E2C04_14915 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D E2C04_03810 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14835 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14840 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D E2C04_14955 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D E2C04_14965 hypothetical protein K02413 fliJ; flagellar protein FliJ
D E2C04_15020 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D E2C04_15025 fliP; flagellar type III secretion system pore protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D E2C04_15030 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D E2C04_15035 type III secretion protein K02421 fliR; flagellar biosynthesis protein FliR
D E2C04_15040 EscU/YscU/HrcU family type III secretion system export apparatus switch protein K02401 flhB; flagellar biosynthesis protein FlhB
D E2C04_14950 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D E2C04_15015 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D E2C04_14940 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D E2C04_00370 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D E2C04_15005 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D E2C04_14935 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D E2C04_14975 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D E2C04_14925 flgB; flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D E2C04_14930 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D E2C04_14870 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D E2C04_14865 flagellar hook protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D E2C04_14885 flagellin K02406 fliC; flagellin
D E2C04_14890 hypothetical protein K02407 fliD; flagellar hook-associated protein 2
D E2C04_14895 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D E2C04_14880 FliA/WhiG family RNA polymerase sigma factor K02405 fliA; RNA polymerase sigma factor FliA
D E2C04_14995 motility protein A K02556 motA; chemotaxis protein MotA
D E2C04_15000 flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D E2C04_14860 flagellar assembly protein FliW K13626 fliW; flagellar assembly factor FliW
D E2C04_08490 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D E2C04_06685 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D E2C04_06690 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D E2C04_06730 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D E2C04_06725 MinD/ParA family protein K02282 cpaE; pilus assembly protein CpaE
D E2C04_00175 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_04750 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_06715 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_09865 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_13330 CpaF family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D E2C04_16180 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ndp04812]
D E2C04_06995 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D E2C04_08050 ParA family protein K03496 parA; chromosome partitioning protein
D E2C04_12645 ParA family protein K03496 parA; chromosome partitioning protein
D E2C04_17440 ParA family protein K03496 parA; chromosome partitioning protein
D E2C04_00500 nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E2C04_09925 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D E2C04_17435 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ndp04147]
D E2C04_03940 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D E2C04_08650 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D E2C04_08655 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D E2C04_07150 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D E2C04_00085 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D E2C04_14175 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D E2C04_02010 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D E2C04_08690 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D E2C04_13620 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D E2C04_13630 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D E2C04_14035 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D E2C04_11600 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D E2C04_11645 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_12270 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_15630 AMP-dependent synthetase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_17250 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D E2C04_01310 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_03315 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_07650 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_11810 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_17245 thiolase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D E2C04_13875 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D E2C04_04870 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D E2C04_08915 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D E2C04_06795 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30]
D E2C04_10465 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10655 glutamine synthetase type III K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_10990 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D E2C04_15600 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D E2C04_07590 4a-hydroxytetrahydrobiopterin dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D E2C04_13460 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D E2C04_13105 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D E2C04_11730 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D E2C04_08660 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:ndp02048]
D E2C04_03605 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D E2C04_16670 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D E2C04_01130 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D E2C04_01135 HipA domain-containing protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D E2C04_16300 PspC domain-containing protein K03973 pspC; phage shock protein C
D E2C04_06995 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D E2C04_05970 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D E2C04_05610 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:ndp04052]
D E2C04_00630 hypothetical protein K05233 PYY; peptide YY
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:ndp01504]
D E2C04_01595 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D E2C04_00675 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_00280 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_10315 M56 family peptidase K02172 blaR1; bla regulator protein blaR1
D E2C04_00360 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ndp03100]
D E2C04_14685 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D E2C04_11705 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D E2C04_00050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D E2C04_05265 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D E2C04_12000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D E2C04_14775 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D E2C04_16610 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D E2C04_11440 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D E2C04_02410 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D E2C04_10135 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D E2C04_10150 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D E2C04_03775 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D E2C04_05980 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D E2C04_02405 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D E2C04_05985 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D E2C04_05990 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D E2C04_05445 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D E2C04_01800 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D E2C04_10130 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D E2C04_10145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D E2C04_05220 tRNA-His K14226 tRNA-His; tRNA His
D E2C04_00045 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D E2C04_08945 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_03980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_05155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_07155 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_00145 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D E2C04_05200 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D E2C04_02460 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D E2C04_05205 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D E2C04_12480 tRNA-Met K14230 tRNA-Met; tRNA Met
D E2C04_15245 tRNA-Met K14230 tRNA-Met; tRNA Met
D E2C04_12415 tRNA-Met K14230 tRNA-Met; tRNA Met
D E2C04_11430 tRNA-Met K14230 tRNA-Met; tRNA Met
D E2C04_02400 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D E2C04_08095 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D E2C04_16475 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D E2C04_05450 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D E2C04_16580 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D E2C04_16595 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D E2C04_16515 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D E2C04_16900 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D E2C04_15250 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D E2C04_16005 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D E2C04_14275 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D E2C04_15195 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D E2C04_15360 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D E2C04_10110 tRNA-Val K14237 tRNA-Val; tRNA Val
D E2C04_10140 tRNA-Val K14237 tRNA-Val; tRNA Val
D E2C04_11320 tRNA-Val K14237 tRNA-Val; tRNA Val
D E2C04_10155 tRNA-Val K14237 tRNA-Val; tRNA Val
D E2C04_07965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_11400 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_13210 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D E2C04_13205 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D E2C04_07970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D E2C04_11395 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D E2C04_07975 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D E2C04_11390 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D E2C04_13200 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D E2C04_16510 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D E2C04_11050 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D E2C04_04945 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D E2C04_02930 TIGR03557 family F420-dependent LLM class oxidoreductase K15510 fgd1; coenzyme F420-dependent glucose-6-phosphate dehydrogenase [EC:1.1.98.2]
D E2C04_16785 nitroreductase family deazaflavin-dependent oxidoreductase K00540 fqr; F420H(2)-dependent quinone reductase [EC:1.1.98.-]
D E2C04_01245 NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D E2C04_03200 mftC; mycofactocin radical SAM maturase K24696 mftC; [mycofactocin precursor peptide]-tyrosine decarboxylase / 3-amino-5-[(4-hydroxyphenyl)methyl]-4,4-dimethylpyrrolidin-2-one synthase [EC:1.3.98.7 4.1.99.26]
D E2C04_15145 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D E2C04_03205 mftD; mycofactocin system-associated heme/flavin dehydrogenase K24693 mftD; pre-mycofactocin synthase [EC:1.4.3.26]
D E2C04_02955 npdG; NADPH-dependent F420 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D E2C04_13100 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D E2C04_00905 NADPH:quinone oxidoreductase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D E2C04_04075 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D E2C04_03720 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D E2C04_01585 glutathione S-transferase family protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D E2C04_04200 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D E2C04_13170 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D E2C04_04965 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D E2C04_11325 peroxiredoxin K24120 ahpE; mycoredoxin-dependent peroxiredoxin [EC:1.11.1.29]
D E2C04_01215 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D E2C04_04380 hypothetical protein K11159 K11159; carotenoid cleavage oxygenase [EC:1.13.11.-]
D E2C04_17100 hemin transporter K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D E2C04_12135 sodN; superoxide dismutase, Ni K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1]
D E2C04_09240 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1]
D E2C04_08575 NAD(P)/FAD-dependent oxidoreductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D E2C04_06870 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D E2C04_12570 mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3]
D E2C04_04400 heat-shock protein HtpX K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D E2C04_01030 protein-L-isoaspartate carboxylmethyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D E2C04_08590 class I SAM-dependent methyltransferase K24288 meT1; MMP 1-O-methyltransferase [EC:2.1.1.365]
D E2C04_05250 sugar O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D E2C04_02630 mshD; mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D E2C04_00325 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D E2C04_00690 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D E2C04_09145 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D E2C04_07565 GNAT family N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D E2C04_01000 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D E2C04_07135 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D E2C04_06065 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D E2C04_15725 disA; DNA integrity scanning protein DisA K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D E2C04_10360 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D E2C04_06765 alpha/beta fold hydrolase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D E2C04_03085 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D E2C04_04940 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D E2C04_05360 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D E2C04_09495 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D E2C04_11710 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D E2C04_08845 histidine phosphatase family protein K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D E2C04_14580 TatD family deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D E2C04_00745 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D E2C04_11855 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-]
D E2C04_08585 prenyltransferase K27194 mmpH; MMP endo-(1,4)-3-O-methyl-alpha-D-mannosidase [EC:3.2.1.221]
D E2C04_03210 mftE; mycofactocin biosynthesis peptidyl-dipeptidase MftE K24697 mftE; mycofactocin precursor peptide peptidase [EC:3.4.14.14]
D E2C04_07750 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D E2C04_04515 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103]
D E2C04_04105 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D E2C04_16960 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D E2C04_02725 PIG-L family deacetylase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D E2C04_06930 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D E2C04_14005 MoxR family ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D E2C04_13720 NAD(P)H-hydrate dehydratase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D E2C04_09070 FKBP-type peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D E2C04_03130 ATP-dependent acyl-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D E2C04_03145 ATP-dependent acyl-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D E2C04_08995 cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D E2C04_01630 acetyl-CoA carboxyl transferase K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D E2C04_09315 sulfurtransferase FdhD K02379 fdhD; FdhD protein
D E2C04_03030 ferredoxin K05337 fer; ferredoxin
D E2C04_11735 electron transfer flavoprotein beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D E2C04_10190 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase
D E2C04_11690 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D E2C04_12065 VOC family protein K08234 yaeR; glyoxylase I family protein
D E2C04_11145 class II glutamine amidotransferase K18802 DUG3; glutamine amidotransferase
D E2C04_07005 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D E2C04_14575 resuscitation-promoting factor K21688 rpfB; resuscitation-promoting factor RpfB
D E2C04_06665 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D E2C04_03190 mftA; mycofactocin precursor K24694 mftA; mycofactocin precursor peptide MftA
D E2C04_03195 mftB; mycofactocin biosynthesis chaperone MftB K24695 mftB; mycofactocin biosynthesis protein MftB
C 99988 Secondary metabolism
D E2C04_08360 NADPH-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D E2C04_11760 DoxX family membrane protein K15977 K15977; putative oxidoreductase
D E2C04_12405 serine esterase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D E2C04_10675 cold-shock protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D E2C04_05090 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D E2C04_05455 trigger factor K03545 tig; trigger factor
D E2C04_16100 urease accessory protein UreF K03188 ureF; urease accessory protein
D E2C04_16105 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D E2C04_16110 urease accessory protein UreD K03190 ureD; urease accessory protein
D E2C04_04930 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein
D E2C04_06240 ATP-binding protein K07391 comM; magnesium chelatase family protein
D E2C04_09295 OsmC family peroxiredoxin K07397 yhfA; putative redox protein
D E2C04_00710 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
C 99976 Replication and repair
D E2C04_06245 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D E2C04_08455 replication-associated recombination protein A K07478 ycaJ; putative ATPase
D E2C04_04765 hypothetical protein K06919 K06919; putative DNA primase/helicase
D E2C04_03000 IS3 family transposase K07497 K07497; putative transposase
D E2C04_10095 IS3 family transposase K07497 K07497; putative transposase
D E2C04_16615 site-specific integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D E2C04_16500 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D E2C04_00885 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D E2C04_07600 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D E2C04_02580 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D E2C04_00865 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D E2C04_05150 bile acid:sodium symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D E2C04_17450 single-stranded DNA-binding protein K06346 jag; spoIIIJ-associated protein
D E2C04_04760 recombinase family protein K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D E2C04_03400 carbon starvation protein A K06200 cstA; carbon starvation protein
D E2C04_11595 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D E2C04_04130 PhoH family protein K07175 phoH2; PhoH-like ATPase
D E2C04_15365 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D E2C04_10290 helix-turn-helix domain-containing protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D E2C04_03530 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein
D E2C04_12400 (2Fe-2S)-binding protein K02192 bfd; bacterioferritin-associated ferredoxin
D E2C04_12470 NAD(P)/FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
B
B 09194 Poorly characterized
C 99996 General function prediction only
D E2C04_12525 PHP domain-containing protein K04477 ycdX; putative hydrolase
D E2C04_04490 PqqD family protein K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D E2C04_16145 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D E2C04_05365 globin K06886 glbN; hemoglobin
D E2C04_00625 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D E2C04_02945 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D E2C04_04170 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D E2C04_11220 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D E2C04_14340 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D E2C04_14295 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily
D E2C04_00075 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D E2C04_12275 esterase K07001 K07001; NTE family protein
D E2C04_08740 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D E2C04_04970 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D E2C04_10185 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein
D E2C04_09155 FxsA family protein K07113 fxsA; UPF0716 protein FxsA
D E2C04_10895 sulfurtransferase K07146 K07146; UPF0176 protein
D E2C04_01115 VOC family protein K04750 phnB; PhnB protein
D E2C04_13500 VOC family protein K04750 phnB; PhnB protein
D E2C04_02080 DedA family protein K03975 dedA; membrane-associated protein
D E2C04_02935 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein
D E2C04_01560 phage holin family protein K08972 K08972; putative membrane protein
D E2C04_04355 hypothetical protein K08981 K08981; putative membrane protein
D E2C04_04035 zinc chelation protein SecC K09858 K09858; SEC-C motif domain protein
D E2C04_12420 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D E2C04_08770 NYN domain-containing protein K06860 K06860; putative heme uptake system protein
D E2C04_03175 hypothetical protein K06893 K06893; uncharacterized protein
D E2C04_12970 CoA-binding protein K06929 K06929; uncharacterized protein
D E2C04_06195 RNA-binding protein K06960 K06960; uncharacterized protein
D E2C04_00840 N-acetyltransferase K06975 K06975; uncharacterized protein
D E2C04_06340 GNAT family N-acetyltransferase K06976 K06976; uncharacterized protein
D E2C04_10735 VOC family protein K06996 K06996; uncharacterized protein
D E2C04_17210 VOC family protein K06996 K06996; uncharacterized protein
D E2C04_08300 ExeM/NucH family extracellular endonuclease K07004 K07004; uncharacterized protein
D E2C04_01285 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D E2C04_03625 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D E2C04_05515 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D E2C04_12190 hydrolase K07020 K07020; uncharacterized protein
D E2C04_04935 amidohydrolase K07045 K07045; uncharacterized protein
D E2C04_08790 peptidase K07054 K07054; uncharacterized protein
D E2C04_10425 NAD-dependent epimerase/dehydratase family protein K07071 K07071; uncharacterized protein
D E2C04_13085 FAD-binding dehydrogenase K07077 K07077; uncharacterized protein
D E2C04_01775 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D E2C04_04015 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D E2C04_08870 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D E2C04_16940 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D E2C04_16470 metallophosphoesterase K07098 K07098; uncharacterized protein
D E2C04_08555 dynein regulation protein LC7 K07131 K07131; uncharacterized protein
D E2C04_07425 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D E2C04_16560 VWA domain-containing protein K07161 K07161; uncharacterized protein
D E2C04_11280 hypothetical protein K07164 K07164; uncharacterized protein
D E2C04_17460 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D E2C04_09330 bifunctional nuclease family protein K08999 K08999; uncharacterized protein
D E2C04_03950 DUF501 domain-containing protein K09009 K09009; uncharacterized protein
D E2C04_16460 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein
D E2C04_12485 UPF0182 family protein K09118 K09118; uncharacterized protein
D E2C04_04365 hypothetical protein K09167 K09167; uncharacterized protein
D E2C04_07920 hypothetical protein K09707 K09707; uncharacterized protein
D E2C04_07925 ACT domain-containing protein K09707 K09707; uncharacterized protein
D E2C04_12810 DUF808 domain-containing protein K09781 K09781; uncharacterized protein
D E2C04_12820 Trm112 family protein K09791 K09791; uncharacterized protein
D E2C04_07355 DUF456 domain-containing protein K09793 K09793; uncharacterized protein
D E2C04_06860 DUF541 domain-containing protein K09807 K09807; uncharacterized protein
D E2C04_11275 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D E2C04_12760 winged helix-turn-helix domain-containing protein K09927 K09927; uncharacterized protein
D E2C04_12030 DUF692 family protein K09930 K09930; uncharacterized protein
D E2C04_17090 DUF2218 domain-containing protein K09956 K09956; uncharacterized protein
D E2C04_01430 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D E2C04_04385 hypothetical protein K09981 K09981; uncharacterized protein
D E2C04_02585 DUF47 domain-containing protein K07220 K07220; uncharacterized protein
D E2C04_06370 YlxR family protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 16, 2024