+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Candidatus Nitrosocosmicus franklandianus

% ! AEukaryotic type B Sno RNPs C Box C/D snoRNPs D NFRAN_3016 putative snoRNA binding domain protein K14564 NOP56; nucleolar protein 56 C Box H/ACA snoRNPs D NFRAN_2692 nop; Ribosome biogenesis protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase C Kinase C Other 90S particles D NFRAN_1021 Ribosome biogenesis protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D NFRAN_0735 KH domain protein K06961 KRR1; ribosomal RNA assembly protein B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors D NFRAN_1812 putative kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D NFRAN_2314 putative ribosome biogenesis protein Msm_0126 K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] C Other pre-40S particles D NFRAN_2773 conserved protein of unknown function K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases D NFRAN_0698 putative Molybdopterin guanine dinucleotide synthesis protein B K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D NFRAN_1821 eif; Translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D NFRAN_1746 Ribosome maturation protein SDO1 homolog K14574 SDO1; ribosome maturation protein SDO1 C 5-FMC complex C Ribosome quality control proteins D NFRAN_0867 Cell division cycle protein 48 homolog AF_1297 K13525 VCP; transitional endoplasmic reticulum ATPase D NFRAN_1776 Cell division cycle protein 48 homolog AF_1297 K13525 VCP; transitional endoplasmic reticulum ATPase D NFRAN_2281 Cell division cycle protein 48 homolog AF_1297 K13525 VCP; transitional endoplasmic reticulum ATPase C Other pre-60S particles D NFRAN_2316 conserved protein of unknown function K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 B Other ribosome biogenesis factors # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D NFRAN_3016 putative snoRNA binding domain protein K14564 NOP56; nucleolar protein 56 D NFRAN_1896 rpl7ae; 50S ribosomal protein L7Ae K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D NFRAN_3142 H/ACA RNA-protein complex component Gar1 K07569 gar1; RNA-binding protein D NFRAN_2692 nop; Ribosome biogenesis protein Nop10 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors C NFRAN_2738 nusA; putative transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA B rRNA modification factors C 16S rRNA modification factors D NFRAN_2256 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] C 23S rRNA modification factors D NFRAN_0730 rlmE; Ribosomal RNA large subunit methyltransferase E K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors C NFRAN_2815 ard; N-alpha-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] B rRNA processing factors B rRNA helicases C NFRAN_1356 cshA; DEAD-box ATP-dependent RNA helicase CshA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C NFRAN_2816 hflX; GTPase HflX K03665 hflX; GTPase B Other maturation factors C NFRAN_0543 Threonylcarbamoyl-AMP synthase (modular protein) K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C NFRAN_1890 conserved protein of unknown function K06942 ychF; ribosome-binding ATPase # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 2, 2025